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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (DDBJ) WIPO-PCT EMBL-EBI Pat
19 sequences found in this patent (in total)

Displaying 1 - 10 of 19 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,131
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
343
Type
peptide
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:32425330
      AAH19268
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      352 aa
    • E Value
      0E0
    • BLAST Score
      718 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAH19268
      97.44% cov
    • Alignment Length
      343 aa
    • CIGAR string
      343M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:62751532
      NP_001015624
    • Hit length
      353 aa
    • E Value
      0E0
    • BLAST Score
      718 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001015624
      97.17% cov
    • Alignment Length
      343 aa
    • CIGAR string
      343M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:148690831
      EDL22778
      1 of 3 hits reported for Mus musculus.
    • Hit length
      358 aa
    • E Value
      0E0
    • BLAST Score
      716.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      EDL22778
      95.81% cov
    • Alignment Length
      343 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13242255
      NP_077339
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      353 aa
    • E Value
      0E0
    • BLAST Score
      716.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_077339
      97.17% cov
    • Alignment Length
      343 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335290012
      XP_003356047
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      353 aa
    • E Value
      0E0
    • BLAST Score
      716.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003356047
      97.17% cov
    • Alignment Length
      343 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73947060
      XP_864131
      1 of 3 hits reported for Canis lupus familiaris.
    • Hit length
      350 aa
    • E Value
      0E0
    • BLAST Score
      715.3 bits
    • Similarity
      100%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 2
      99.71% cov
      XP_864131
      97.71% cov
    • Alignment Length
      342 aa
Occurrence
16 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:163954974
      NG_007073
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      10,880 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NG_007073
      0.18% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332860561
      XR_019963
      1 of 6 hits reported for Pan troglodytes.
    • Hit length
      1,220 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XR_019963
      1.64% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249238
      XM_003273723
      1 of 6 hits reported for Nomascus leucogenys.
    • Hit length
      1,433 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003273723
      1.4% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297266678
      XR_013566
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,083 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XR_013566
      1.85% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197098287
      NM_001132295
    • Hit length
      1,334 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001132295
      1.5% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208966383
      AB463693
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,022 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB463693
      1.96% cov
    • Alignment Length
      20 bp
Occurrence
42 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:163954974
      NG_007073
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      10,880 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NG_007073
      0.18% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332860561
      XR_019963
      1 of 6 hits reported for Pan troglodytes.
    • Hit length
      1,220 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XR_019963
      1.64% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249238
      XM_003273723
      1 of 6 hits reported for Nomascus leucogenys.
    • Hit length
      1,433 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003273723
      1.4% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297266678
      XR_013566
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,083 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XR_013566
      1.85% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197098287
      NM_001132295
    • Hit length
      1,334 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001132295
      1.5% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208966383
      AB463693
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,022 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB463693
      1.96% cov
    • Alignment Length
      20 bp
Occurrence
42 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:241666450
      NG_012339
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      45,460 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NG_012339
      0.04% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332820816
      XM_003310609
      1 of 5 hits reported for Pan troglodytes.
    • Hit length
      2,165 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003310609
      0.92% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332228113
      XM_003263187
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,272 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003263187
      1.57% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297293937
      XR_014839
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,860 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XR_014839
      1.08% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296195009
      XM_002745154
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,952 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002745154
      1.02% cov
    • Alignment Length
      20 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261858101
      AB527409
      1 of 3 hits reported for synthetic construct.
    • Hit length
      2,009 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB527409
      1% cov
    • Alignment Length
      20 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:148717222
      AB083328
      1 of 2 hits reported for Macaca fascicularis.
    • Hit length
      2,257 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB083328
      0.89% cov
    • Alignment Length
      20 bp
Occurrence
205 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
22
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:241666450
      NG_012339
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      45,460 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NG_012339
      0.05% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332862406
      XM_001173228
      1 of 8 hits reported for Pan troglodytes.
    • Hit length
      489 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001173228
      4.5% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291413982
      XM_002723194
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      2,373 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002723194
      0.93% cov
    • Alignment Length
      22 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194224070
      XM_001490889
    • Hit length
      2,343 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001490889
      0.94% cov
    • Alignment Length
      22 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74003073
      XM_851844
      1 of 6 hits reported for Canis lupus familiaris.
    • Hit length
      2,276 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_851844
      0.97% cov
    • Alignment Length
      22 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097443
      NM_001133161
    • Hit length
      2,365 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001133161
      0.93% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261858101
      AB527409
    • Hit length
      2,009 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AB527409
      1.1% cov
    • Alignment Length
      22 bp
Occurrence
204 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
24
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335290017
      XM_003356002
      1 of 8 hits reported for Sus scrofa.
    • Hit length
      1,209 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003356002
      1.99% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:333360914
      NR_033397
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      1,592 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NR_033397
      1.51% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332856787
      XM_512828
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      776 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_512828
      3.09% cov
    • Alignment Length
      24 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332241112
      XM_003269683
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,194 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003269683
      2.01% cov
    • Alignment Length
      24 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297277643
      XM_001113609
    • Hit length
      1,299 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_001113609
      1.85% cov
    • Alignment Length
      24 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291415449
      XR_085527
    • Hit length
      1,334 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_085527
      1.8% cov
    • Alignment Length
      24 bp
  • Ixodes scapularis

    Ixodes scapularis

    • Public DB hit
      GI:241814080
      XM_002416494
    • Hit length
      1,465 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002416494
      1.64% cov
    • Alignment Length
      24 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197100343
      NM_001132788
    • Hit length
      1,467 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001132788
      1.64% cov
    • Alignment Length
      24 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:62751531
      NM_001015624
    • Hit length
      1,308 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001015624
      1.83% cov
    • Alignment Length
      24 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
25
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:333360914
      NR_033397
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      1,592 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_033397
      1.57% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332856787
      XM_512828
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      776 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_512828
      3.22% cov
    • Alignment Length
      25 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332241112
      XM_003269683
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,194 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003269683
      2.09% cov
    • Alignment Length
      25 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297277643
      XM_001113609
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,299 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_001113609
      1.92% cov
    • Alignment Length
      25 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296234369
      XR_090824
      1 of 5 hits reported for Callithrix jacchus.
    • Hit length
      1,252 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_090824
      2% cov
    • Alignment Length
      25 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197100343
      NM_001132788
    • Hit length
      1,467 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001132788
      1.7% cov
    • Alignment Length
      25 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:62751531
      NM_001015624
    • Hit length
      1,308 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001015624
      1.91% cov
    • Alignment Length
      25 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:307686214
      AB590883
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,076 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AB590883
      2.32% cov
    • Alignment Length
      25 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
25
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:333360914
      NR_033397
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      1,592 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_033397
      1.57% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332856787
      XM_512828
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      776 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_512828
      3.22% cov
    • Alignment Length
      25 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249416
      XM_003273809
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,380 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003273809
      1.81% cov
    • Alignment Length
      25 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297690863
      XM_002822780
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,995 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002822780
      1.25% cov
    • Alignment Length
      25 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297277643
      XM_001113609
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,299 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_001113609
      1.92% cov
    • Alignment Length
      25 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296234369
      XR_090824
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,252 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XR_090824
      2% cov
    • Alignment Length
      25 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:293358958
      XM_001071456
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      1,179 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_001071456
      2.12% cov
    • Alignment Length
      25 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291415449
      XR_085527
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      1,334 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XR_085527
      1.87% cov
    • Alignment Length
      25 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194215789
      XM_001917742
    • Hit length
      1,412 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_001917742
      1.77% cov
    • Alignment Length
      25 bp
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149417754
      XM_001521125
    • Hit length
      1,316 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_001521125
      1.9% cov
    • Alignment Length
      25 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130593
      NM_019830
      1 of 2 hits reported for Mus musculus.
    • Hit length
      1,272 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_019830
      1.97% cov
    • Alignment Length
      25 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
25
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:333360914
      NR_033397
      1 of 18 hits reported for Homo sapiens.
    • Hit length
      1,592 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NR_033397
      1.57% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332856787
      XM_512828
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      776 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_512828
      3.22% cov
    • Alignment Length
      25 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297277643
      XM_001113609
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,299 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001113609
      1.92% cov
    • Alignment Length
      25 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:307686214
      AB590883
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,076 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AB590883
      2.32% cov
    • Alignment Length
      25 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90075031
      AB170133
    • Hit length
      1,252 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AB170133
      2% cov
    • Alignment Length
      25 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder

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