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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat
549 sequences found in this patent (in total)

Displaying 1 - 10 of 549 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,194
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:30682906
      NM_112250
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      1,576 bp
    • E Value
      0E0
    • BLAST Score
      2,206 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_112250
      75.76% cov
    • Alignment Length
      1,194 bp
    • CIGAR string
      1194M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297829963
      XM_002882818
    • Hit length
      1,590 bp
    • E Value
      0E0
    • BLAST Score
      1,816.4 bits
    • Similarity
      94.29%
    • Coverage
      99.58%
    • Alignment (schematic)

      SEQ ID NO 1
      99.58% cov
      XM_002882818
      74.97% cov
    • Alignment Length
      1,208 bp
Occurrence
30 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
397
Type
peptide
Locations
Claims, Fulltext

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:30682907
      NP_188012
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      397 aa
    • E Value
      0E0
    • BLAST Score
      820.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_188012
      100% cov
    • Alignment Length
      397 aa
    • CIGAR string
      397M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297829964
      XP_002882864
    • Hit length
      398 aa
    • E Value
      0E0
    • BLAST Score
      638.6 bits
    • Similarity
      92.56%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002882864
      100% cov
    • Alignment Length
      403 aa
Occurrence
45 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
735
Type
DNA
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:18396272
      NM_126630
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      872 bp
    • E Value
      0E0
    • BLAST Score
      1,358.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_126630
      84.29% cov
    • Alignment Length
      735 bp
    • CIGAR string
      735M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297831703
      XM_002883688
    • Hit length
      847 bp
    • E Value
      0E0
    • BLAST Score
      1,125.7 bits
    • Similarity
      94.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002883688
      87.49% cov
    • Alignment Length
      749 bp
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
244
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:18396273
      NP_027759
    • Hit length
      244 aa
    • E Value
      2.32E-140
    • BLAST Score
      502.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_027759
      100% cov
    • Alignment Length
      244 aa
    • CIGAR string
      244M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297831704
      XP_002883734
    • Hit length
      246 aa
    • E Value
      3.23E-112
    • BLAST Score
      409.5 bits
    • Similarity
      95.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002883734
      100% cov
    • Alignment Length
      248 aa
    • CIGAR string
      26MNMN26MNMD77MIMN41M3I17MNMN14MDMNMN27M mismatches: 8 - insertions: 4 - deletions: 2
Occurrence
24 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
1,593
Type
DNA
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:42569248
      NM_127849
      1 of 4 hits reported for Arabidopsis thaliana.
    • Hit length
      1,838 bp
    • E Value
      0E0
    • BLAST Score
      2,942.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_127849
      86.67% cov
    • Alignment Length
      1,593 bp
    • CIGAR string
      1593M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297821510
      XM_002878592
    • Hit length
      1,829 bp
    • E Value
      0E0
    • BLAST Score
      2,510.7 bits
    • Similarity
      95.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002878592
      86.77% cov
    • Alignment Length
      1,596 bp
Occurrence
38 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
530
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15227758
      NP_179869
    • Hit length
      530 aa
    • E Value
      0E0
    • BLAST Score
      1,086.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_179869
      100% cov
    • Alignment Length
      530 aa
    • CIGAR string
      530M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297821511
      XP_002878638
    • Hit length
      528 aa
    • E Value
      0E0
    • BLAST Score
      923.3 bits
    • Similarity
      94.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002878638
      100% cov
    • Alignment Length
      531 aa
    • CIGAR string
      11M2N36M2NM2N2M4NI17MD14MNMN23MN7MN124M2N2M4NM2N2D8MN9MNMN2MN2MN2MN19MN4MN37MN11MN9MNMN56MN5MN51MN34M mismatches: 37 - insertions: 1 - deletions: 3
Occurrence
72 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
1,197
Type
DNA
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:42569670
      NM_129197
      1 of 11 hits reported for Arabidopsis thaliana.
    • Hit length
      1,615 bp
    • E Value
      0E0
    • BLAST Score
      2,211.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_129197
      74.12% cov
    • Alignment Length
      1,197 bp
    • CIGAR string
      1197M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297827116
      XM_002881395
    • Hit length
      1,510 bp
    • E Value
      0E0
    • BLAST Score
      1,901.3 bits
    • Similarity
      95.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002881395
      78.87% cov
    • Alignment Length
      1,204 bp
Occurrence
34 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
398
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15227652
      NP_181181
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      398 aa
    • E Value
      0E0
    • BLAST Score
      821.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_181181
      100% cov
    • Alignment Length
      398 aa
    • CIGAR string
      398M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297827117
      XP_002881441
    • Hit length
      396 aa
    • E Value
      7.7E-166
    • BLAST Score
      588.6 bits
    • Similarity
      94.5%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002881441
      100% cov
    • Alignment Length
      400 aa
    • CIGAR string
      14M3D20MN2MN9MN13MN127MN5MD4N3M2N3MN2MN9MNMIMN4MIM2N2M3NM2N31MN63MN26MN32M mismatches: 25 - insertions: 2 - deletions: 4
Occurrence
124 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
1,290
Type
DNA
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:42570427
      NM_180107
      1 of 4 hits reported for Arabidopsis thaliana.
    • Hit length
      1,565 bp
    • E Value
      0E0
    • BLAST Score
      2,383.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_180107
      82.43% cov
    • Alignment Length
      1,290 bp
    • CIGAR string
      1290M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297824596
      XM_002880135
    • Hit length
      1,305 bp
    • E Value
      0E0
    • BLAST Score
      1,775.8 bits
    • Similarity
      91.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002880135
      99.54% cov
    • Alignment Length
      1,308 bp
Occurrence
22 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
429
Type
peptide
Locations
Fulltext

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:42570428
      NP_850438
      1 of 4 hits reported for Arabidopsis thaliana.
    • Hit length
      429 aa
    • E Value
      0E0
    • BLAST Score
      898.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_850438
      100% cov
    • Alignment Length
      429 aa
    • CIGAR string
      429M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297824597
      XP_002880181
    • Hit length
      434 aa
    • E Value
      0E0
    • BLAST Score
      713.8 bits
    • Similarity
      90.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002880181
      99.54% cov
    • Alignment Length
      433 aa
Occurrence
22 times in PatSeqDB
Tools
PatSeq Finder

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