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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
30 sequences found in this patent (in total)

Displaying 1 - 10 of 30 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
57
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Shuttle vector pMAL-pIII

    Shuttle vector pMAL-pIII

    • Public DB hit
      GI:2623821
      AF031088
    • Hit length
      6,706 bp
    • E Value
      5E-19
    • BLAST Score
      100.8 bits
    • Similarity
      98.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AF031088
      0.85% cov
    • Alignment Length
      57 bp
    • CIGAR string
      3MN53M mismatches: 1 - insertions: 0 - deletions: 0
  • Expression vector pMal-X

    Expression vector pMal-X

    • Public DB hit
      GI:2654020
      AF031813
    • Hit length
      6,748 bp
    • E Value
      1.81E-13
    • BLAST Score
      82.4 bits
    • Similarity
      97.87%
    • Coverage
      82.46%
    • Alignment (schematic)

      SEQ ID NO 1
      82.46% cov
      AF031813
      0.7% cov
    • Alignment Length
      47 bp
    • CIGAR string
      3MN43M10H mismatches: 1 - insertions: 0 - deletions: 0
  • Cloning vector pFrdcat2

    Cloning vector pFrdcat2

    • Public DB hit
      GI:220880602
      AM909725
    • Hit length
      8,741 bp
    • E Value
      8.48E-7
    • BLAST Score
      60.2 bits
    • Similarity
      97.22%
    • Coverage
      61.4%
    • Alignment (schematic)

      SEQ ID NO 1
      61.4% cov
      AM909725
      0.41% cov
    • Alignment Length
      36 bp
    • CIGAR string
      16H3MI32M6H mismatches: 0 - insertions: 1 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
4
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Occurrence
2550 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
8
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:330865602
      AEC47043
      1 of 18 hits reported for synthetic construct.
    • Hit length
      412 aa
    • E Value
      7.91E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AEC47043
      1.94% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:315113237
      3ALA_A
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      748 aa
    • E Value
      7.91E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      3ALA_A
      1.07% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Agrobacterium fabrum str. C58

    Agrobacterium fabrum str. C58

    • Public DB hit
      GI:288965857
      3LLQ_A
    • Hit length
      256 aa
    • E Value
      7.91E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      3LLQ_A
      3.12% cov
    • Alignment Length
      8 aa
  • Drosophila melanogaster

    Drosophila melanogaster

    • Public DB hit
      GI:223365839
      3DC4_A
    • Hit length
      344 aa
    • E Value
      7.91E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      3DC4_A
      2.33% cov
    • Alignment Length
      8 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:260656293
      3GKZ_A
    • Hit length
      257 aa
    • E Value
      1.24E2
    • BLAST Score
      29.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      3GKZ_A
      3.11% cov
    • Alignment Length
      8 aa
Occurrence
11129 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
1,710
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Lassa virus

    Lassa virus

    • Public DB hit
      GI:323903299
      HQ688672
      1 of 7 hits reported for Lassa virus.
    • Hit length
      3,401 bp
    • E Value
      0E0
    • BLAST Score
      3,158.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HQ688672
      50.28% cov
    • Alignment Length
      1,710 bp
    • CIGAR string
      1710M mismatches: 0 - insertions: 0 - deletions: 0
  • Mopeia Lassa virus reassortant 29

    Mopeia Lassa virus reassortant 29

    • Public DB hit
      GI:55667952
      AY772168
    • Hit length
      3,402 bp
    • E Value
      0E0
    • BLAST Score
      3,142.3 bits
    • Similarity
      99.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AY772168
      50.26% cov
    • Alignment Length
      1,710 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
569
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Lassa virus

    Lassa virus

    • Public DB hit
      GI:23343510
      NP_694869
      1 of 17 hits reported for Lassa virus.
    • Hit length
      569 aa
    • E Value
      0E0
    • BLAST Score
      1,174.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_694869
      100% cov
    • Alignment Length
      569 aa
    • CIGAR string
      569M mismatches: 0 - insertions: 0 - deletions: 0
  • Lassa virus Josiah

    Lassa virus Josiah

    • Public DB hit
      GI:313103827
      3MWP_A
    • Hit length
      577 aa
    • E Value
      0E0
    • BLAST Score
      1,174.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      3MWP_A
      98.61% cov
    • Alignment Length
      569 aa
    • CIGAR string
      569M mismatches: 0 - insertions: 0 - deletions: 0
  • Mopeia Lassa virus reassortant 29

    Mopeia Lassa virus reassortant 29

    • Public DB hit
      GI:56699503
      YP_170706
    • Hit length
      569 aa
    • E Value
      0E0
    • BLAST Score
      1,170.6 bits
    • Similarity
      99.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_170706
      100% cov
    • Alignment Length
      569 aa
    • CIGAR string
      172MN311MN84M mismatches: 2 - insertions: 0 - deletions: 0
  • Lassa virus GA391

    Lassa virus GA391

    • Public DB hit
      GI:127894
      P04935
    • Hit length
      570 aa
    • E Value
      0E0
    • BLAST Score
      1,065.1 bits
    • Similarity
      94.39%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      P04935
      100% cov
    • Alignment Length
      570 aa
  • Gbagroube virus

    Gbagroube virus

    • Public DB hit
      GI:323147116
      ADX32837
    • Hit length
      569 aa
    • E Value
      0E0
    • BLAST Score
      1,030.8 bits
    • Similarity
      94.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ADX32837
      100% cov
    • Alignment Length
      569 aa
  • Morogoro virus

    Morogoro virus

    • Public DB hit
      GI:255237670
      YP_003090215
    • Hit length
      570 aa
    • E Value
      0E0
    • BLAST Score
      926.8 bits
    • Similarity
      89.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_003090215
      100% cov
    • Alignment Length
      570 aa
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
1,479
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Lassa virus

    Lassa virus

    • Public DB hit
      GI:49037386
      AY628203
      1 of 22 hits reported for Lassa virus.
    • Hit length
      3,402 bp
    • E Value
      0E0
    • BLAST Score
      2,732.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AY628203
      43.47% cov
    • Alignment Length
      1,479 bp
    • CIGAR string
      1479M mismatches: 0 - insertions: 0 - deletions: 0
  • Mopeia Lassa virus reassortant 29

    Mopeia Lassa virus reassortant 29

    • Public DB hit
      GI:55667952
      AY772168
    • Hit length
      3,402 bp
    • E Value
      0E0
    • BLAST Score
      2,726.8 bits
    • Similarity
      99.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AY772168
      43.47% cov
    • Alignment Length
      1,479 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
491
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Lassa virus

    Lassa virus

    • Public DB hit
      GI:23343511
      NP_694870
      1 of 17 hits reported for Lassa virus.
    • Hit length
      491 aa
    • E Value
      0E0
    • BLAST Score
      1,030.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_694870
      100% cov
    • Alignment Length
      491 aa
    • CIGAR string
      491M mismatches: 0 - insertions: 0 - deletions: 0
  • Mopeia Lassa virus reassortant 29

    Mopeia Lassa virus reassortant 29

    • Public DB hit
      GI:56699502
      YP_170705
    • Hit length
      491 aa
    • E Value
      0E0
    • BLAST Score
      1,028.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_170705
      100% cov
    • Alignment Length
      491 aa
    • CIGAR string
      271MN219M mismatches: 1 - insertions: 0 - deletions: 0
  • Lassa virus GA391

    Lassa virus GA391

    • Public DB hit
      GI:138354
      P17332
    • Hit length
      490 aa
    • E Value
      0E0
    • BLAST Score
      971.8 bits
    • Similarity
      97.56%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      P17332
      100% cov
    • Alignment Length
      491 aa
  • Gbagroube virus

    Gbagroube virus

    • Public DB hit
      GI:323147115
      ADX32836
    • Hit length
      490 aa
    • E Value
      0E0
    • BLAST Score
      945.3 bits
    • Similarity
      94.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ADX32836
      100% cov
    • Alignment Length
      491 aa
  • Mobala virus

    Mobala virus

    • Public DB hit
      GI:89885730
      YP_516226
    • Hit length
      491 aa
    • E Value
      0E0
    • BLAST Score
      827.8 bits
    • Similarity
      87.6%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_516226
      100% cov
    • Alignment Length
      492 aa
  • Mopeia virus

    Mopeia virus

    • Public DB hit
      GI:85542277
      ABC71134
    • Hit length
      489 aa
    • E Value
      0E0
    • BLAST Score
      825.1 bits
    • Similarity
      88.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ABC71134
      100% cov
    • Alignment Length
      491 aa
Occurrence
67 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
60
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
20
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:15277559
      AAH12876
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      236 aa
    • E Value
      5.37E-3
    • BLAST Score
      44.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AAH12876
      8.47% cov
    • Alignment Length
      20 aa
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73995551
      XP_848644
      1 of 5 hits reported for Canis lupus familiaris.
    • Hit length
      156 aa
    • E Value
      7.49E-3
    • BLAST Score
      44.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_848644
      12.82% cov
    • Alignment Length
      20 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114687332
      XP_001148022
    • Hit length
      81 aa
    • E Value
      1.11E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_001148022
      24.69% cov
    • Alignment Length
      20 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
57
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder

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