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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
108 sequences found in this patent (in total)

Displaying 1 - 10 of 108 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
4,167
Type
DNA
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:334185050
      NM_001202869
      1 of 7 hits reported for Arabidopsis thaliana.
    • Hit length
      4,580 bp
    • E Value
      0E0
    • BLAST Score
      7,696.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001202869
      90.98% cov
    • Alignment Length
      4,167 bp
    • CIGAR string
      4167M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297832973
      XM_002884323
    • Hit length
      6,102 bp
    • E Value
      0E0
    • BLAST Score
      5,576.2 bits
    • Similarity
      95.29%
    • Coverage
      84.4%
    • Alignment (schematic)

      SEQ ID NO 1
      84.4% cov
      XM_002884323
      57.64% cov
    • Alignment Length
      3,522 bp
  • Brassica rapa

    Brassica rapa

    • Public DB hit
      GI:189908861
      EU584213
    • Hit length
      4,179 bp
    • E Value
      0E0
    • BLAST Score
      4,095.1 bits
    • Similarity
      84.7%
    • Coverage
      99.5%
    • Alignment (schematic)

      SEQ ID NO 1
      99.5% cov
      EU584213
      99.64% cov
    • Alignment Length
      4,221 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
1,388
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145338056
      NP_566199
      1 of 5 hits reported for Arabidopsis thaliana.
    • Hit length
      1,388 aa
    • E Value
      0E0
    • BLAST Score
      2,887.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_566199
      100% cov
    • Alignment Length
      1,388 aa
    • CIGAR string
      1388M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297832974
      XP_002884369
    • Hit length
      2,033 aa
    • E Value
      0E0
    • BLAST Score
      2,484.1 bits
    • Similarity
      91.42%
    • Coverage
      99.06%
    • Alignment (schematic)

      SEQ ID NO 2
      99.06% cov
      XP_002884369
      64.09% cov
    • Alignment Length
      1,375 aa
  • Brassica rapa

    Brassica rapa

    • Public DB hit
      GI:189908862
      ACE60552
    • Hit length
      1,392 aa
    • E Value
      0E0
    • BLAST Score
      2,311.2 bits
    • Similarity
      88.02%
    • Coverage
      99.42%
    • Alignment (schematic)

      SEQ ID NO 2
      99.42% cov
      ACE60552
      99.57% cov
    • Alignment Length
      1,386 aa
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
4,596
Type
DNA
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:18407671
      NM_114260
      1 of 5 hits reported for Arabidopsis thaliana.
    • Hit length
      4,596 bp
    • E Value
      0E0
    • BLAST Score
      8,488.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_114260
      100% cov
    • Alignment Length
      4,596 bp
    • CIGAR string
      4596M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297815499
      XM_002875587
    • Hit length
      4,593 bp
    • E Value
      0E0
    • BLAST Score
      7,144 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002875587
      100% cov
    • Alignment Length
      4,605 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
1,531
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15229816
      NP_189978
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      1,531 aa
    • E Value
      0E0
    • BLAST Score
      3,172.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_189978
      100% cov
    • Alignment Length
      1,531 aa
    • CIGAR string
      1531M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297815500
      XP_002875633
    • Hit length
      1,521 aa
    • E Value
      0E0
    • BLAST Score
      2,869 bits
    • Similarity
      95.21%
    • Coverage
      99.41%
    • Alignment (schematic)

      SEQ ID NO 4
      99.41% cov
      XP_002875633
      100% cov
    • Alignment Length
      1,523 aa
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
5,109
Type
DNA
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145358263
      NM_122039
      1 of 5 hits reported for Arabidopsis thaliana.
    • Hit length
      5,660 bp
    • E Value
      0E0
    • BLAST Score
      9,435.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_122039
      90.27% cov
    • Alignment Length
      5,109 bp
    • CIGAR string
      5109M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297812214
      XM_002873945
    • Hit length
      5,082 bp
    • E Value
      0E0
    • BLAST Score
      7,993.4 bits
    • Similarity
      95.02%
    • Coverage
      99.92%
    • Alignment (schematic)

      SEQ ID NO 5
      99.92% cov
      XM_002873945
      99.98% cov
    • Alignment Length
      5,122 bp
    • CIGAR string
      8MN23MN9MN7MN13MDMD7MDN2MN9MN10M3I3MIMIMI8MN23MDM2D5M2DMD17MDM2D4MN17M5IMNMI15MN7MN7MN2M3D13MN6MN8MN14MN3MN9MN14M4D2MDM5DMDMD4MN12MN66MN10MN7MN8MN33MN67MN11MN11MN36MNMN35MN18MN3MN39MN22MN72MN26MN59MN32MN21MN59MN21MN7MN19MN48MN5MN9MN9MN22MN20MNMN20MN5MN40MN13M6D10MN11M2N38MN12MN29MN9MN14MN45MN10MN26MN131MN3MN237MN23MD2MI9MN5MIMD19MN57MN87MNMN61M2N17MN2MN36MN49MN20MN44MN14MN12MD2MI2MN2MN5MN18MN4MNMN27MN4MN18MN7MN40MN10MN65MN29MN21MN43MN5MN5MN32MN2MN18MN2MN12MN38MN52MN8MN4MN3MN7MN52M2N3MN3MN6MN11MN12MNMN11MN36MN6MN31MN6MN55MN9MN24MN26MN8MN26MN21MN20MN38MN43MN96MN25MN35MNM2N20MN16MN4MN28MN57MNMN3MN24MN2MN4MN15M2DMD21MN98MNMDMI69MN29MN25MN134MN44MN15MN59MNMN5MN7MN23MN4MNMN19MN78MN68MN17MN67MN4MN8MN16MN45MN32M2N16MI2MD11MN27MN3MN2M2N48MN31MN4MN5MNMN6MN11MN36MN36MN8MN8MN73MN11MN30MN4MN44MN92M4H mismatches: 197 - insertions: 17 - deletions: 41
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224088235
      XM_002308348
    • Hit length
      4,767 bp
    • E Value
      6.5E-68
    • BLAST Score
      270.7 bits
    • Similarity
      77.64%
    • Coverage
      9.43%
    • Alignment (schematic)

      SEQ ID NO 5
      9.43% cov
      XM_002308348
      10.11% cov
    • Alignment Length
      501 bp
    • CIGAR string
      1392H5MN5MN5MN8MDN2MIM3NMN3MI2MD2MN5MD2NMI6MN2MNMN3MNMN12MNMN9MN7MN9MN2MNMN3M2N3MN3MI2MD2MDMIMD3MINM2NMI2MDN10MN6MN8M2N2MIMDN14MN6MN3MN2M2N2MD3M2INMD2MN3MIMNMD6MINMD2MIN2MD2MNMN2MN6MN4MN20MN29MN2MI2MD4MI2MD5MN6MN7MN5MN2MN2MN8MN2MN8MN10M2N3MNMN8MN6MNMD4MI3MDMI3MD2MI2MN2MI6MN3MD2MN6MN3MN6MNMN5M3235H mismatches: 74 - insertions: 19 - deletions: 19
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
1,702
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145358264
      NP_197532
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      1,702 aa
    • E Value
      0E0
    • BLAST Score
      3,511.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_197532
      100% cov
    • Alignment Length
      1,702 aa
    • CIGAR string
      1702M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297812215
      XP_002873991
    • Hit length
      1,693 aa
    • E Value
      0E0
    • BLAST Score
      3,145.9 bits
    • Similarity
      95.42%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 6
      99.94% cov
      XP_002873991
      100% cov
    • Alignment Length
      1,704 aa
    • CIGAR string
      2MN11MN7MNM2N2MIN3M3N2MN8M2D2N7MND5MN2M2I3MN4MNMD6MN2MN4M2N9M4DN5MN21MN3MN16MN42MN18M2N20MN71MN19MN6MN2MN22MNMN2MN10MN6M2N6MNMN18M2D2MN4MN12MN3MN9MN2MN20MN57MN78MN7MN3MNMN6MN48MN20MN19MN42MN4MN10MNMN10MN8MN13MN2MN39MN13MN22M2N3MN12MN17MN2MN2MNMN17MNM2N10MN16MNMN10MNMN21MN19MN8MN14MN12MN54MN11M2N12MN30MNMN7M2NMN4MND40MN23MN9MN7MN65MN19MN4MN7MNMN6MN77MNMN7MN15MN10MN5MN13M3N16MN9MNMNM2NMN3MN24MN2MN2MN38MN46M1H mismatches: 128 - insertions: 3 - deletions: 11
Occurrence
16 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
1,500
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:332640072
      CP002686
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      23,459,830 bp
    • E Value
      0E0
    • BLAST Score
      2,771.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002686
      0.01% cov
    • Alignment Length
      1,500 bp
    • CIGAR string
      1500M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
1,500
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:332640072
      CP002686
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      23,459,830 bp
    • E Value
      0E0
    • BLAST Score
      2,771.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CP002686
      0.01% cov
    • Alignment Length
      1,500 bp
    • CIGAR string
      1500M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
1,500
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:332002898
      CP002688
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      26,975,502 bp
    • E Value
      0E0
    • BLAST Score
      2,771.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CP002688
      0.01% cov
    • Alignment Length
      1,500 bp
    • CIGAR string
      1500M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
278
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:332656411
      CP002687
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      18,585,056 bp
    • E Value
      1.32E-142
    • BLAST Score
      514.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002687
      0% cov
    • Alignment Length
      278 bp
    • CIGAR string
      278M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder

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