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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
62 sequences found in this patent (in total)

Displaying 1 - 10 of 62 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
32
Type
nucleotide
Locations
Detailed Description

Declared organism:
Torque teno virus

Determined organism:
  • Torque teno sus virus 1a

    Torque teno sus virus 1a

    • Public DB hit
      GI:307341467
      HM633252
      1 of 22 hits reported for Torque teno sus virus 1a.
    • Hit length
      2,897 bp
    • E Value
      2.78E-8
    • BLAST Score
      63.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      HM633252
      1.1% cov
    • Alignment Length
      32 bp
    • CIGAR string
      32M mismatches: 0 - insertions: 0 - deletions: 0
  • Torque teno virus

    Torque teno virus

    • Public DB hit
      GI:189187501
      EU564164
      1 of 3 hits reported for Torque teno virus.
    • Hit length
      253 bp
    • E Value
      2.78E-8
    • BLAST Score
      63.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU564164
      12.65% cov
    • Alignment Length
      32 bp
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
27
Type
nucleotide
Locations
Detailed Description

Declared organism:
Torque teno virus

Determined organism:
  • Torque teno sus virus 1a

    Torque teno sus virus 1a

    • Public DB hit
      GI:290574433
      GU456383
      1 of 17 hits reported for Torque teno sus virus 1a.
    • Hit length
      2,878 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      GU456383
      0.94% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Torque teno sus virus SH0822/2008

    Torque teno sus virus SH0822/2008

    • Public DB hit
      GI:291585985
      GU450331
    • Hit length
      2,823 bp
    • E Value
      6.79E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      92.59%
    • Alignment (schematic)

      SEQ ID NO 2
      92.59% cov
      GU450331
      0.89% cov
    • Alignment Length
      25 bp
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
28
Type
nucleotide
Locations
Detailed Description

Declared organism:
Torque teno virus

Determined organism:
  • Torque teno sus virus 1a

    Torque teno sus virus 1a

    • Public DB hit
      GI:307341452
      HM633249
      1 of 9 hits reported for Torque teno sus virus 1a.
    • Hit length
      2,882 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      HM633249
      0.97% cov
    • Alignment Length
      28 bp
    • CIGAR string
      28M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
28
Type
nucleotide
Locations
Detailed Description

Declared organism:
Torque teno virus

Determined organism:
  • Torque teno sus virus 1a

    Torque teno sus virus 1a

    • Public DB hit
      GI:307341487
      HM633256
      1 of 15 hits reported for Torque teno sus virus 1a.
    • Hit length
      2,911 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HM633256
      0.96% cov
    • Alignment Length
      28 bp
    • CIGAR string
      28M mismatches: 0 - insertions: 0 - deletions: 0
  • TT virus group 1

    TT virus group 1

    • Public DB hit
      GI:255964861
      GQ358961
      1 of 3 hits reported for TT virus group 1.
    • Hit length
      263 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ358961
      10.65% cov
    • Alignment Length
      28 bp
  • Torque teno virus

    Torque teno virus

    • Public DB hit
      GI:157673102
      EU006504
      1 of 5 hits reported for Torque teno virus.
    • Hit length
      224 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EU006504
      12.5% cov
    • Alignment Length
      28 bp
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Torque teno virus

Determined organism:
  • Torque teno sus virus 1b

    Torque teno sus virus 1b

    • Public DB hit
      GI:329757154
      HQ829188
      1 of 25 hits reported for Torque teno sus virus 1b.
    • Hit length
      201 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 5
      90.91% cov
      HQ829188
      9.95% cov
    • Alignment Length
      20 bp
    • CIGAR string
      2H20M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
24
Type
nucleotide
Locations
Detailed Description

Declared organism:
Torque teno virus

Determined organism:
  • Torque teno sus virus 1b

    Torque teno sus virus 1b

    • Public DB hit
      GI:307341632
      HM633240
      1 of 25 hits reported for Torque teno sus virus 1b.
    • Hit length
      2,807 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      HM633240
      0.86% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
27
Type
nucleotide
Locations
Detailed Description

Declared organism:
Torque teno virus

Determined organism:
  • Torque teno sus virus 1b

    Torque teno sus virus 1b

    • Public DB hit
      GI:329757158
      HQ829192
      1 of 25 hits reported for Torque teno sus virus 1b.
    • Hit length
      150 bp
    • E Value
      2.79E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      92.59%
    • Alignment (schematic)

      SEQ ID NO 7
      92.59% cov
      HQ829192
      16.67% cov
    • Alignment Length
      25 bp
    • CIGAR string
      2H25M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
27
Type
nucleotide
Locations
Detailed Description

Declared organism:
Torque teno virus

Determined organism:
  • Torque teno sus virus 1b

    Torque teno sus virus 1b

    • Public DB hit
      GI:320006430
      HQ204188
      1 of 23 hits reported for Torque teno sus virus 1b.
    • Hit length
      2,802 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HQ204188
      0.96% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Torque teno sus virus

    Torque teno sus virus

    • Public DB hit
      GI:301751794
      HM042360
      1 of 2 hits reported for Torque teno sus virus.
    • Hit length
      1,186 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HM042360
      2.28% cov
    • Alignment Length
      27 bp
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
2,878
Type
nucleotide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Torque teno virus

Determined organism:
  • Torque teno sus virus 1a

    Torque teno sus virus 1a

    • Public DB hit
      GI:290574433
      GU456383
      1 of 3 hits reported for Torque teno sus virus 1a.
    • Hit length
      2,878 bp
    • E Value
      0E0
    • BLAST Score
      5,315.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU456383
      100% cov
    • Alignment Length
      2,878 bp
    • CIGAR string
      2878M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
2,875
Type
nucleotide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Torque teno virus

Determined organism:
  • Torque teno sus virus 1a

    Torque teno sus virus 1a

    • Public DB hit
      GI:290574438
      GU456384
      1 of 14 hits reported for Torque teno sus virus 1a.
    • Hit length
      2,875 bp
    • E Value
      0E0
    • BLAST Score
      5,310.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      GU456384
      100% cov
    • Alignment Length
      2,875 bp
    • CIGAR string
      2875M mismatches: 0 - insertions: 0 - deletions: 0
  • Torque teno sus virus SH0822/2008

    Torque teno sus virus SH0822/2008

    • Public DB hit
      GI:291585985
      GU450331
    • Hit length
      2,823 bp
    • E Value
      0E0
    • BLAST Score
      3,472.8 bits
    • Similarity
      91.59%
    • Coverage
      87.65%
    • Alignment (schematic)

      SEQ ID NO 10
      87.65% cov
      GU450331
      89.23% cov
    • Alignment Length
      2,533 bp
Occurrence
28 times in PatSeqDB
Tools
PatSeq Finder

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