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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
37 sequences found in this patent (in total)

Displaying 1 - 10 of 37 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
107
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:41388184
      AAS01771
      1 of 24 hits reported for Homo sapiens.
    • Hit length
      236 aa
    • E Value
      2.28E-53
    • BLAST Score
      212.6 bits
    • Similarity
      97.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAS01771
      45.34% cov
    • Alignment Length
      107 aa
    • CIGAR string
      29MN12MN46MN2MN10MN3M mismatches: 5 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:47109384
      CAG28673
    • Hit length
      246 aa
    • E Value
      6E-50
    • BLAST Score
      201.1 bits
    • Similarity
      96.19%
    • Coverage
      98.13%
    • Alignment (schematic)

      SEQ ID NO 1
      98.13% cov
      CAG28673
      42.68% cov
    • Alignment Length
      105 aa
Occurrence
1160 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
121
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:247425875
      ACS96275
      1 of 21 hits reported for Homo sapiens.
    • Hit length
      123 aa
    • E Value
      4.89E-56
    • BLAST Score
      221.5 bits
    • Similarity
      91.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ACS96275
      98.37% cov
    • Alignment Length
      121 aa
    • CIGAR string
      49MNMN4MNMN5MN27MN5M7N2MN13M mismatches: 14 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:15028440
      AAK81716
      1 of 4 hits reported for synthetic construct.
    • Hit length
      243 aa
    • E Value
      2.09E-54
    • BLAST Score
      216.1 bits
    • Similarity
      90.83%
    • Coverage
      99.17%
    • Alignment (schematic)

      SEQ ID NO 2
      99.17% cov
      AAK81716
      48.97% cov
    • Alignment Length
      120 aa
Occurrence
2487 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
9
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
748 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
12
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
743 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
7
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Thermus scotoductus SA-01

    Thermus scotoductus SA-01

    • Public DB hit
      GI:320449951
      YP_004202047
      1 of 2 hits reported for Thermus scotoductus SA-01.
    • Hit length
      652 aa
    • E Value
      5.59E3
    • BLAST Score
      23.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_004202047
      1.07% cov
    • Alignment Length
      7 aa
    • CIGAR string
      7M mismatches: 0 - insertions: 0 - deletions: 0
  • Burkholderia sp. CCGE1002

    Burkholderia sp. CCGE1002

    • Public DB hit
      GI:295677665
      YP_003606189
      1 of 2 hits reported for Burkholderia sp. CCGE1002.
    • Hit length
      440 aa
    • E Value
      5.59E3
    • BLAST Score
      23.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_003606189
      1.59% cov
    • Alignment Length
      7 aa
    • CIGAR string
      7M mismatches: 0 - insertions: 0 - deletions: 0
  • Nematostella vectensis

    Nematostella vectensis

    • Public DB hit
      GI:156360814
      XP_001625219
    • Hit length
      554 aa
    • E Value
      5.59E3
    • BLAST Score
      23.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001625219
      1.26% cov
    • Alignment Length
      7 aa
    • CIGAR string
      7M mismatches: 0 - insertions: 0 - deletions: 0
  • Microscilla marina ATCC 23134

    Microscilla marina ATCC 23134

    • Public DB hit
      GI:124005470
      ZP_01690310
    • Hit length
      465 aa
    • E Value
      5.59E3
    • BLAST Score
      23.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ZP_01690310
      1.51% cov
    • Alignment Length
      7 aa
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:115484893
      NP_001067590
    • Hit length
      579 aa
    • E Value
      5.59E3
    • BLAST Score
      23.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001067590
      1.21% cov
    • Alignment Length
      7 aa
  • Sphingopyxis alaskensis RB2256

    Sphingopyxis alaskensis RB2256

    • Public DB hit
      GI:103488239
      YP_617800
    • Hit length
      333 aa
    • E Value
      5.59E3
    • BLAST Score
      23.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_617800
      2.1% cov
    • Alignment Length
      7 aa
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297815386
      XP_002875576
    • Hit length
      654 aa
    • E Value
      5.64E3
    • BLAST Score
      23.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002875576
      1.07% cov
    • Alignment Length
      7 aa
  • Burkholderia sp. H160

    Burkholderia sp. H160

    • Public DB hit
      GI:209517531
      ZP_03266371
    • Hit length
      440 aa
    • E Value
      5.96E3
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ZP_03266371
      1.59% cov
    • Alignment Length
      7 aa
  • Perkinsus marinus ATCC 50983

    Perkinsus marinus ATCC 50983

    • Public DB hit
      GI:294897934
      XP_002776101
    • Hit length
      242 aa
    • E Value
      6.72E3
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002776101
      2.89% cov
    • Alignment Length
      7 aa
  • Xanthomonas campestris pv. musacearum NCPPB 4381

    Xanthomonas campestris pv. musacearum NCPPB 4381

    • Public DB hit
      GI:289670964
      ZP_06492039
      1 of 2 hits reported for Xanthomonas campestris pv. musacearum NCPPB 4381.
    • Hit length
      305 aa
    • E Value
      9.61E3
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ZP_06492039
      2.3% cov
    • Alignment Length
      7 aa
  • Xanthomonas vasicola pv. vasculorum NCPPB 702

    Xanthomonas vasicola pv. vasculorum NCPPB 702

    • Public DB hit
      GI:289663576
      ZP_06485157
      1 of 2 hits reported for Xanthomonas vasicola pv. vasculorum NCPPB 702.
    • Hit length
      305 aa
    • E Value
      9.61E3
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ZP_06485157
      2.3% cov
    • Alignment Length
      7 aa
  • Oikopleura dioica

    Oikopleura dioica

    • Public DB hit
      GI:313235942
      CBY25085
    • Hit length
      530 aa
    • E Value
      1.36E4
    • BLAST Score
      22.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CBY25085
      1.32% cov
    • Alignment Length
      7 aa
  • Acinetobacter johnsonii SH046

    Acinetobacter johnsonii SH046

    • Public DB hit
      GI:262369366
      ZP_06062694
    • Hit length
      686 aa
    • E Value
      1.44E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ZP_06062694
      1.02% cov
    • Alignment Length
      7 aa
  • Pseudomonas fulva 12-X

    Pseudomonas fulva 12-X

    • Public DB hit
      GI:333900143
      YP_004474016
    • Hit length
      295 aa
    • E Value
      1.56E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_004474016
      2.37% cov
    • Alignment Length
      7 aa
  • Cryptococcus gattii WM276

    Cryptococcus gattii WM276

    • Public DB hit
      GI:321261467
      XP_003195453
    • Hit length
      904 aa
    • E Value
      1.61E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003195453
      0.77% cov
    • Alignment Length
      7 aa
  • Monosiga brevicollis MX1

    Monosiga brevicollis MX1

    • Public DB hit
      GI:167520870
      XP_001744774
    • Hit length
      520 aa
    • E Value
      1.64E4
    • BLAST Score
      21.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001744774
      1.35% cov
    • Alignment Length
      7 aa
Occurrence
4871 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
17
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
933 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
11
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:323432421
      ADX65836
      1 of 23 hits reported for Homo sapiens.
    • Hit length
      146 aa
    • E Value
      2.49E-1
    • BLAST Score
      38.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ADX65836
      7.53% cov
    • Alignment Length
      11 aa
    • CIGAR string
      11M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:225625708
      ACN96927
    • Hit length
      192 aa
    • E Value
      9.91E0
    • BLAST Score
      32.9 bits
    • Similarity
      90.91%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ACN96927
      5.73% cov
    • Alignment Length
      11 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:5731265
      AAD48840
    • Hit length
      242 aa
    • E Value
      2.2E3
    • BLAST Score
      25.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AAD48840
      4.55% cov
    • Alignment Length
      11 aa
Occurrence
1086 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
5
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
5363 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
107
Type
peptide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:41388184
      AAS01771
      1 of 24 hits reported for Homo sapiens.
    • Hit length
      236 aa
    • E Value
      1.73E-53
    • BLAST Score
      213 bits
    • Similarity
      97.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AAS01771
      45.34% cov
    • Alignment Length
      107 aa
    • CIGAR string
      14MN14MN12MN53MN6MN3M mismatches: 5 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:47109384
      CAG28673
    • Hit length
      246 aa
    • E Value
      4.56E-50
    • BLAST Score
      201.4 bits
    • Similarity
      96.19%
    • Coverage
      98.13%
    • Alignment (schematic)

      SEQ ID NO 9
      98.13% cov
      CAG28673
      42.68% cov
    • Alignment Length
      105 aa
Occurrence
498 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
121
Type
peptide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:106899595
      ABF83426
      1 of 20 hits reported for Homo sapiens.
    • Hit length
      123 aa
    • E Value
      2.29E-52
    • BLAST Score
      209.1 bits
    • Similarity
      88.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      ABF83426
      98.37% cov
    • Alignment Length
      121 aa
    • CIGAR string
      N44MN3MNMN4MNMN5MN3M2N7MN9MN4MN6M7NMNMN11M mismatches: 21 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:327322932
      AEA48887
      1 of 5 hits reported for synthetic construct.
    • Hit length
      274 aa
    • E Value
      6.62E-51
    • BLAST Score
      204.1 bits
    • Similarity
      88.24%
    • Coverage
      98.35%
    • Alignment (schematic)

      SEQ ID NO 10
      98.35% cov
      AEA48887
      43.43% cov
    • Alignment Length
      119 aa
Occurrence
505 times in PatSeqDB
Tools
PatSeq Finder

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