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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
215 sequences found in this patent (in total)

Displaying 1 - 10 of 215 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
2,205
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Lotus japonicus

Determined organism:
  • Lotus japonicus

    Lotus japonicus

    • Public DB hit
      GI:37651061
      AJ575248
      1 of 2 hits reported for Lotus japonicus.
    • Hit length
      2,205 bp
    • E Value
      0E0
    • BLAST Score
      4,073 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AJ575248
      100% cov
    • Alignment Length
      2,205 bp
    • CIGAR string
      2205M mismatches: 0 - insertions: 0 - deletions: 0
  • Medicago truncatula

    Medicago truncatula

    • Public DB hit
      GI:159885726
      BN001116
      1 of 2 hits reported for Medicago truncatula.
    • Hit length
      1,839 bp
    • E Value
      0E0
    • BLAST Score
      1,644.6 bits
    • Similarity
      83.25%
    • Coverage
      84.54%
    • Alignment (schematic)

      SEQ ID NO 1
      84.54% cov
      BN001116
      99.89% cov
    • Alignment Length
      1,910 bp
    • CIGAR string
      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 mismatches: 201 - insertions: 46 - deletions: 73
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
2,292
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Lotus japonicus

Determined organism:
  • Lotus japonicus

    Lotus japonicus

    • Public DB hit
      GI:37651075
      AJ575255
      1 of 2 hits reported for Lotus japonicus.
    • Hit length
      2,292 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AJ575255
      100% cov
    • Alignment Length
      2,292 bp
    • CIGAR string
      2292M mismatches: 0 - insertions: 0 - deletions: 0
  • Lotus pedunculatus

    Lotus pedunculatus

    • Public DB hit
      GI:315455198
      FN424263
    • Hit length
      2,228 bp
    • E Value
      0E0
    • BLAST Score
      3,338 bits
    • Similarity
      95.77%
    • Coverage
      90.31%
    • Alignment (schematic)

      SEQ ID NO 2
      90.31% cov
      FN424263
      92.64% cov
    • Alignment Length
      2,078 bp
    • CIGAR string
      69H14MDMI6MN24MN11MN74MN10MN8MN3MN4MN6MN50MN23MN134MNMN13MN40MN5MN12MN3MN31MN37MNM2N76MN23MN26MN69MN4MN90MN31MN26MNMN14MN69MN11MN27MN10MN92MN63MN83MN110MN24MN60MN122MN2MN25MN16MNMN123MN64MN8MNMN3MN8MN2MN5MN3M2N11MN25MN3MN3I14M2N20M2DMD2MD30MNMNMI2MI2MI18M3DMN8MDM4D2MN24MDMI20M153H mismatches: 66 - insertions: 8 - deletions: 14
  • Glycine max

    Glycine max

    • Public DB hit
      GI:299481065
      GQ340452
      1 of 13 hits reported for Glycine max.
    • Hit length
      2,331 bp
    • E Value
      0E0
    • BLAST Score
      1,544.9 bits
    • Similarity
      81.49%
    • Coverage
      84.99%
    • Alignment (schematic)

      SEQ ID NO 2
      84.99% cov
      GQ340452
      83.91% cov
    • Alignment Length
      2,010 bp
  • Pisum sativum

    Pisum sativum

    • Public DB hit
      GI:283855902
      GU292812
      1 of 3 hits reported for Pisum sativum.
    • Hit length
      3,310 bp
    • E Value
      0E0
    • BLAST Score
      1,149.7 bits
    • Similarity
      78.73%
    • Coverage
      79.36%
    • Alignment (schematic)

      SEQ ID NO 2
      79.36% cov
      GU292812
      54.8% cov
    • Alignment Length
      1,871 bp
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
2,063
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145338803
      NM_113058
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      2,063 bp
    • E Value
      0E0
    • BLAST Score
      3,810.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_113058
      100% cov
    • Alignment Length
      2,063 bp
    • CIGAR string
      2063M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297835145
      XM_002885409
    • Hit length
      1,949 bp
    • E Value
      0E0
    • BLAST Score
      2,793.3 bits
    • Similarity
      93.55%
    • Coverage
      90.94%
    • Alignment (schematic)

      SEQ ID NO 3
      90.94% cov
      XM_002885409
      96.51% cov
    • Alignment Length
      1,892 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
1,979
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145337991
      NM_111050
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      1,979 bp
    • E Value
      0E0
    • BLAST Score
      3,655.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_111050
      100% cov
    • Alignment Length
      1,979 bp
    • CIGAR string
      1979M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297828563
      XM_002882118
    • Hit length
      1,926 bp
    • E Value
      0E0
    • BLAST Score
      2,839.4 bits
    • Similarity
      94.22%
    • Coverage
      93.84%
    • Alignment (schematic)

      SEQ ID NO 4
      93.84% cov
      XM_002882118
      96.88% cov
    • Alignment Length
      1,867 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
2,321
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145336641
      NM_104075
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      2,321 bp
    • E Value
      0E0
    • BLAST Score
      4,287.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_104075
      100% cov
    • Alignment Length
      2,321 bp
    • CIGAR string
      2321M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297852923
      XM_002894297
    • Hit length
      2,186 bp
    • E Value
      0E0
    • BLAST Score
      3,042.6 bits
    • Similarity
      94.45%
    • Coverage
      85.44%
    • Alignment (schematic)

      SEQ ID NO 5
      85.44% cov
      XM_002894297
      90.48% cov
    • Alignment Length
      2,001 bp
    • CIGAR string
      154H4MN26MN7MN12M3D2M3DM2DMDM5DM2D2MD27MNMN8MNMN9MN32MN23MN6MIMD63MN56MN12M2N39MNM2N11MN6MNMN2MN65M2N31MIMD28MN2MN7MN34MNMD3MI2MNMI4MD21MN4MN8MN26MN30MN88MN14MN125MN31M6IMIM3IMIMI132MN8MN12MN31MN119MN13MN45MN44MN65MN8MN8MN11MN2MI2MND29MN32MN8MN26MN11MN2MN24MN4MN65MN46MN2MIMD2MN17MN59MN17MN4MN15MN2MN53MN32MN2MN32MN19M184H mismatches: 70 - insertions: 18 - deletions: 23
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
1,839
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:18400368
      NM_127940
      1 of 4 hits reported for Arabidopsis thaliana.
    • Hit length
      1,839 bp
    • E Value
      0E0
    • BLAST Score
      3,397.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_127940
      100% cov
    • Alignment Length
      1,839 bp
    • CIGAR string
      1839M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297825284
      XM_002880479
    • Hit length
      1,836 bp
    • E Value
      0E0
    • BLAST Score
      2,538.4 bits
    • Similarity
      92.13%
    • Coverage
      97.99%
    • Alignment (schematic)

      SEQ ID NO 6
      97.99% cov
      XM_002880479
      98.31% cov
    • Alignment Length
      1,818 bp
Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
2,239
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:42569593
      NM_128918
      1 of 7 hits reported for Arabidopsis thaliana.
    • Hit length
      2,239 bp
    • E Value
      0E0
    • BLAST Score
      4,135.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_128918
      100% cov
    • Alignment Length
      2,239 bp
    • CIGAR string
      2239M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297826814
      XM_002881244
    • Hit length
      2,204 bp
    • E Value
      0E0
    • BLAST Score
      3,125.7 bits
    • Similarity
      92.45%
    • Coverage
      97.45%
    • Alignment (schematic)

      SEQ ID NO 7
      97.45% cov
      XM_002881244
      100% cov
    • Alignment Length
      2,212 bp
  • Brassica rapa subsp. pekinensis

    Brassica rapa subsp. pekinensis

    • Public DB hit
      GI:199579971
      AC189292
    • Hit length
      112,396 bp
    • E Value
      0E0
    • BLAST Score
      1,537.5 bits
    • Similarity
      80.64%
    • Coverage
      92.01%
    • Alignment (schematic)

      SEQ ID NO 7
      92.01% cov
      AC189292
      1.84% cov
    • Alignment Length
      2,118 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
1,159
Type
nucleotide
Locations
Detailed Description

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:30692622
      NM_114433
      1 of 7 hits reported for Arabidopsis thaliana.
    • Hit length
      1,483 bp
    • E Value
      0E0
    • BLAST Score
      2,141.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_114433
      78.15% cov
    • Alignment Length
      1,159 bp
    • CIGAR string
      1159M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:110180189
      DQ508109
    • Hit length
      1,176 bp
    • E Value
      0E0
    • BLAST Score
      2,050.9 bits
    • Similarity
      100%
    • Coverage
      95.77%
    • Alignment (schematic)

      SEQ ID NO 8
      95.77% cov
      DQ508109
      94.39% cov
    • Alignment Length
      1,110 bp
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297815707
      XM_002875691
    • Hit length
      1,473 bp
    • E Value
      0E0
    • BLAST Score
      1,919.8 bits
    • Similarity
      96.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002875691
      78.68% cov
    • Alignment Length
      1,159 bp
  • Chorispora bungeana

    Chorispora bungeana

    • Public DB hit
      GI:55978181
      AY805424
    • Hit length
      1,419 bp
    • E Value
      0E0
    • BLAST Score
      1,495.1 bits
    • Similarity
      90.76%
    • Coverage
      96.89%
    • Alignment (schematic)

      SEQ ID NO 8
      96.89% cov
      AY805424
      78.93% cov
    • Alignment Length
      1,125 bp
  • Brassica napus

    Brassica napus

    • Public DB hit
      GI:54402039
      AY642433
    • Hit length
      1,464 bp
    • E Value
      0E0
    • BLAST Score
      1,437.8 bits
    • Similarity
      89.8%
    • Coverage
      96.89%
    • Alignment (schematic)

      SEQ ID NO 8
      96.89% cov
      AY642433
      76.71% cov
    • Alignment Length
      1,127 bp
  • Capsicum annuum

    Capsicum annuum

    • Public DB hit
      GI:8925320
      AF247135
    • Hit length
      1,644 bp
    • E Value
      5.92E-157
    • BLAST Score
      564.3 bits
    • Similarity
      78.79%
    • Coverage
      75.24%
    • Alignment (schematic)

      SEQ ID NO 8
      75.24% cov
      AF247135
      53.04% cov
    • Alignment Length
      891 bp
  • Ipomoea batatas

    Ipomoea batatas

    • Public DB hit
      GI:5007037
      AF149424
      1 of 2 hits reported for Ipomoea batatas.
    • Hit length
      1,495 bp
    • E Value
      1.28E-153
    • BLAST Score
      553.3 bits
    • Similarity
      78.18%
    • Coverage
      77.83%
    • Alignment (schematic)

      SEQ ID NO 8
      77.83% cov
      AF149424
      60.33% cov
    • Alignment Length
      921 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
1,219
Type
nucleotide
Locations
Detailed Description

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:30678847
      NM_116355
      1 of 5 hits reported for Arabidopsis thaliana.
    • Hit length
      1,219 bp
    • E Value
      0E0
    • BLAST Score
      2,252.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_116355
      100% cov
    • Alignment Length
      1,219 bp
    • CIGAR string
      1219M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297810028
      XM_002872852
    • Hit length
      1,173 bp
    • E Value
      0E0
    • BLAST Score
      1,794.2 bits
    • Similarity
      94.41%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 9
      95.65% cov
      XM_002872852
      100% cov
    • Alignment Length
      1,180 bp
    • CIGAR string
      26M2D30MI79MN10M3I2M6I2MN15M2N21MN9MN38MN37MN5MN5MN6MN4MN16MN68MN12MN12MN43MN131MN20MN20MN2MN44MN22MN5MN18MN4MN24MN26MN7MDM2D24MN32MN20MN2MN86M2N18MN15MI9MI2MD6MN4MN26M2N16MN29M2I3MN22MN8MN3MD14MN7MN4M53H mismatches: 45 - insertions: 14 - deletions: 7
  • Capsella rubella

    Capsella rubella

    • Public DB hit
      GI:27817202
      AY166720
    • Hit length
      909 bp
    • E Value
      0E0
    • BLAST Score
      1,219.9 bits
    • Similarity
      91.12%
    • Coverage
      73.58%
    • Alignment (schematic)

      SEQ ID NO 9
      73.58% cov
      AY166720
      100% cov
    • Alignment Length
      912 bp
  • Brassica napus

    Brassica napus

    • Public DB hit
      GI:229558103
      FJ384105
      1 of 2 hits reported for Brassica napus.
    • Hit length
      894 bp
    • E Value
      0E0
    • BLAST Score
      966.9 bits
    • Similarity
      86.53%
    • Coverage
      73.83%
    • Alignment (schematic)

      SEQ ID NO 9
      73.83% cov
      FJ384105
      98.32% cov
    • Alignment Length
      906 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
927
Type
nucleotide
Locations
Detailed Description

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:186512803
      NM_118486
      1 of 4 hits reported for Arabidopsis thaliana.
    • Hit length
      934 bp
    • E Value
      0E0
    • BLAST Score
      1,713 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_118486
      99.25% cov
    • Alignment Length
      927 bp
    • CIGAR string
      927M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297803781
      XM_002869729
    • Hit length
      926 bp
    • E Value
      0E0
    • BLAST Score
      1,319.6 bits
    • Similarity
      92.59%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 10
      99.57% cov
      XM_002869729
      99.35% cov
    • Alignment Length
      931 bp
  • Brassica napus

    Brassica napus

    • Public DB hit
      GI:206574962
      EU912400
    • Hit length
      1,122 bp
    • E Value
      0E0
    • BLAST Score
      1,009.4 bits
    • Similarity
      86.56%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 10
      99.57% cov
      EU912400
      81.73% cov
    • Alignment Length
      930 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder

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