Methods For Generating Databases And Databases For Identifying Polymorphic Genetic Markers

Data obtained from: EMBL-EBI Pat DDBJ Pat USPTO Fulltext NCBI GenBank
118 sequences found in this patent (in total)

Filter sequences

Clear
Download sequences in fasta format: 3 peptides 115 nucleotides

Displaying 91 - 100 of 118 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
91
Length
43
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224809272
      NG_011478
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      15,174 bp
    • E Value
      1.45E-14
    • BLAST Score
      85.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 91
      100% cov
      NG_011478
      0.28% cov
    • Alignment Length
      43 bp
    • CIGAR string
      43M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:148245435
      AC198528
    • Hit length
      179,942 bp
    • E Value
      2.1E-7
    • BLAST Score
      61.9 bits
    • Similarity
      94.87%
    • Coverage
      90.7%
    • Alignment (schematic)

      SEQ ID NO 91
      90.7% cov
      AC198528
      0.02% cov
    • Alignment Length
      39 bp
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
92
Length
42
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:15290629
      AF401225
    • Hit length
      73 bp
    • E Value
      1.94E-4
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      61.9%
    • Alignment (schematic)

      SEQ ID NO 92
      61.9% cov
      AF401225
      35.62% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M16H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
36 times in PatSeqDB
Tools
SEQ ID NO
93
Length
44
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
94
Length
42
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:15290629
      AF401225
    • Hit length
      73 bp
    • E Value
      1.94E-4
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      61.9%
    • Alignment (schematic)

      SEQ ID NO 94
      61.9% cov
      AF401225
      35.62% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M16H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
36 times in PatSeqDB
Tools
SEQ ID NO
95
Length
20
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:51476403
      CR749338
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      6,858 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 95
      100% cov
      CR749338
      0.29% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
96
Length
17
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843078
      XM_003314512
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      4,313 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 96
      100% cov
      XM_003314512
      0.39% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:168480073
      NM_000623
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      4,197 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 96
      100% cov
      NM_000623
      0.41% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
97
Length
23
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Cloning vector pAW8ENdeI-C3HA

    Cloning vector pAW8ENdeI-C3HA

    • Public DB hit
      GI:336089660
      JF340118
    • Hit length
      8,433 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF340118
      0.27% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pAW8ENdeI-CTAP

    Cloning vector pAW8ENdeI-CTAP

    • Public DB hit
      GI:336089658
      JF340117
    • Hit length
      8,892 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF340117
      0.26% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pAW8ENdeI-cyEGFP

    Cloning vector pAW8ENdeI-cyEGFP

    • Public DB hit
      GI:336089656
      JF340116
    • Hit length
      9,057 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF340116
      0.25% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pAW8ENdeI

    Cloning vector pAW8ENdeI

    • Public DB hit
      GI:336089653
      JF340115
    • Hit length
      8,289 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF340115
      0.28% cov
    • Alignment Length
      23 bp
  • Gene deletion vector pEMG

    Gene deletion vector pEMG

    • Public DB hit
      GI:335893243
      JF965437
    • Hit length
      3,168 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF965437
      0.73% cov
    • Alignment Length
      23 bp
  • Cloning vector pBOB

    Cloning vector pBOB

    • Public DB hit
      GI:335355349
      JF927991
    • Hit length
      8,730 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF927991
      0.26% cov
    • Alignment Length
      23 bp
  • Expression vector pLoxGentrc

    Expression vector pLoxGentrc

    • Public DB hit
      GI:334265229
      JF934954
    • Hit length
      6,295 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF934954
      0.37% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV34

    Cloning vector pPLV34

    • Public DB hit
      GI:334085873
      JF909487
    • Hit length
      5,606 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909487
      0.41% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV33

    Cloning vector pPLV33

    • Public DB hit
      GI:334085870
      JF909486
    • Hit length
      5,251 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909486
      0.44% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV32

    Cloning vector pPLV32

    • Public DB hit
      GI:334085867
      JF909485
    • Hit length
      4,898 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909485
      0.47% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV31

    Cloning vector pPLV31

    • Public DB hit
      GI:334085864
      JF909484
    • Hit length
      9,507 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909484
      0.24% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV30

    Cloning vector pPLV30

    • Public DB hit
      GI:334085861
      JF909483
    • Hit length
      9,152 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909483
      0.25% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV29

    Cloning vector pPLV29

    • Public DB hit
      GI:334085858
      JF909482
    • Hit length
      8,799 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909482
      0.26% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV28

    Cloning vector pPLV28

    • Public DB hit
      GI:334085855
      JF909481
    • Hit length
      6,389 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909481
      0.36% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV27

    Cloning vector pPLV27

    • Public DB hit
      GI:334085852
      JF909480
    • Hit length
      6,750 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909480
      0.34% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV26

    Cloning vector pPLV26

    • Public DB hit
      GI:334085849
      JF909479
    • Hit length
      6,395 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909479
      0.36% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV25

    Cloning vector pPLV25

    • Public DB hit
      GI:334085846
      JF909478
    • Hit length
      6,042 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909478
      0.38% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV24

    Cloning vector pPLV24

    • Public DB hit
      GI:334085842
      JF909477
    • Hit length
      6,862 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909477
      0.34% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV23

    Cloning vector pPLV23

    • Public DB hit
      GI:334085838
      JF909476
    • Hit length
      6,507 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909476
      0.35% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV22

    Cloning vector pPLV22

    • Public DB hit
      GI:334085834
      JF909475
    • Hit length
      6,154 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909475
      0.37% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV21

    Cloning vector pPLV21

    • Public DB hit
      GI:334085830
      JF909474
    • Hit length
      6,151 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909474
      0.37% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV20

    Cloning vector pPLV20

    • Public DB hit
      GI:334085826
      JF909473
    • Hit length
      5,797 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909473
      0.4% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV19

    Cloning vector pPLV19

    • Public DB hit
      GI:334085822
      JF909472
    • Hit length
      5,443 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909472
      0.42% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV18

    Cloning vector pPLV18

    • Public DB hit
      GI:334085818
      JF909471
    • Hit length
      6,151 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909471
      0.37% cov
    • Alignment Length
      23 bp
  • Cloning vector pPLV17

    Cloning vector pPLV17

    • Public DB hit
      GI:334085814
      JF909470
    • Hit length
      5,797 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 97
      100% cov
      JF909470
      0.4% cov
    • Alignment Length
      23 bp
Occurrence
311 times in PatSeqDB
Tools
SEQ ID NO
98
Length
100
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:210032137
      NG_008855
      1 of 16 hits reported for Homo sapiens.
    • Hit length
      35,189 bp
    • E Value
      3.35E-44
    • BLAST Score
      185.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 98
      100% cov
      NG_008855
      0.28% cov
    • Alignment Length
      100 bp
    • CIGAR string
      100M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332825654
      XM_001149804
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      4,048 bp
    • E Value
      3.35E-44
    • BLAST Score
      185.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 98
      100% cov
      XM_001149804
      2.47% cov
    • Alignment Length
      100 bp
    • CIGAR string
      100M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297682392
      XM_002818859
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,574 bp
    • E Value
      3.35E-44
    • BLAST Score
      185.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 98
      100% cov
      XM_002818859
      3.89% cov
    • Alignment Length
      100 bp
    • CIGAR string
      100M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168275757
      AB384743
    • Hit length
      1,442 bp
    • E Value
      3.35E-44
    • BLAST Score
      185.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 98
      100% cov
      AB384743
      6.93% cov
    • Alignment Length
      100 bp
  • Pongo pygmaeus

    Pongo pygmaeus

    • Public DB hit
      GI:14599881
      AF358853
    • Hit length
      312 bp
    • E Value
      3.35E-44
    • BLAST Score
      185.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 98
      100% cov
      AF358853
      32.05% cov
    • Alignment Length
      100 bp
  • Gorilla gorilla

    Gorilla gorilla

    • Public DB hit
      GI:14599879
      AF358852
    • Hit length
      312 bp
    • E Value
      3.35E-44
    • BLAST Score
      185.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 98
      100% cov
      AF358852
      32.05% cov
    • Alignment Length
      100 bp
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
99
Length
100
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:123994150
      DQ893751
      1 of 8 hits reported for synthetic construct.
    • Hit length
      1,468 bp
    • E Value
      3.35E-44
    • BLAST Score
      185.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 99
      100% cov
      DQ893751
      6.81% cov
    • Alignment Length
      100 bp
    • CIGAR string
      100M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:30582290
      BT006726
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      1,428 bp
    • E Value
      3.35E-44
    • BLAST Score
      185.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 99
      100% cov
      BT006726
      7% cov
    • Alignment Length
      100 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332825654
      XM_001149804
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      4,048 bp
    • E Value
      1.56E-42
    • BLAST Score
      180.2 bits
    • Similarity
      99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 99
      100% cov
      XM_001149804
      2.47% cov
    • Alignment Length
      100 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297682392
      XM_002818859
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,574 bp
    • E Value
      1.56E-42
    • BLAST Score
      180.2 bits
    • Similarity
      99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 99
      100% cov
      XM_002818859
      3.89% cov
    • Alignment Length
      100 bp
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
100
Length
100
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
Occurrence
18 times in PatSeqDB
Tools

Feedback