Methods For Generating Databases And Databases For Identifying Polymorphic Genetic Markers

Data obtained from: EMBL-EBI Pat DDBJ Pat USPTO Fulltext NCBI GenBank
118 sequences found in this patent (in total)

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Displaying 61 - 70 of 118 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
61
Length
30
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
62
Length
14
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
63
Length
18
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:219689120
      NG_009262
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      21,891 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 63
      100% cov
      NG_009262
      0.08% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:111120407
      AC161613
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      218,563 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 63
      100% cov
      AC161613
      0.01% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Gorilla gorilla

    Gorilla gorilla

    • Public DB hit
      GI:87046160
      DQ142917
      1 of 2 hits reported for Gorilla gorilla.
    • Hit length
      10,198 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 63
      100% cov
      DQ142917
      0.18% cov
    • Alignment Length
      18 bp
  • Pan paniscus

    Pan paniscus

    • Public DB hit
      GI:87046150
      DQ142913
      1 of 2 hits reported for Pan paniscus.
    • Hit length
      9,544 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 63
      100% cov
      DQ142913
      0.19% cov
    • Alignment Length
      18 bp
  • Branchiostoma floridae

    Branchiostoma floridae

    • Public DB hit
      GI:260805763
      XM_002597710
    • Hit length
      366 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 63
      94.44% cov
      XM_002597710
      4.64% cov
    • Alignment Length
      17 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:254746260
      FP015883
    • Hit length
      207,869 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 63
      94.44% cov
      FP015883
      0.01% cov
    • Alignment Length
      17 bp
  • Paralichthys olivaceus

    Paralichthys olivaceus

    • Public DB hit
      GI:237772683
      FJ915047
      1 of 5 hits reported for Paralichthys olivaceus.
    • Hit length
      163 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 63
      94.44% cov
      FJ915047
      10.43% cov
    • Alignment Length
      17 bp
  • Oryza sativa Indica Group

    Oryza sativa Indica Group

    • Public DB hit
      GI:116310898
      CR855227
    • Hit length
      144,811 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 63
      94.44% cov
      CR855227
      0.01% cov
    • Alignment Length
      17 bp
Occurrence
36 times in PatSeqDB
Tools
SEQ ID NO
64
Length
26
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21322209
      AF126253
    • Hit length
      242 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 64
      100% cov
      AF126253
      10.74% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
65 times in PatSeqDB
Tools
SEQ ID NO
65
Length
28
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21322209
      AF126253
    • Hit length
      242 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 65
      100% cov
      AF126253
      11.57% cov
    • Alignment Length
      28 bp
    • CIGAR string
      28M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
51 times in PatSeqDB
Tools
SEQ ID NO
66
Length
19
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:28380636
      NG_000007
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      81,706 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 66
      100% cov
      NG_000007
      0.02% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes verus

    Pan troglodytes verus

    • Public DB hit
      GI:265385512
      FJ788228
      1 of 19 hits reported for Pan troglodytes verus.
    • Hit length
      1,012 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 66
      100% cov
      FJ788228
      1.88% cov
    • Alignment Length
      19 bp
  • Pan troglodytes vellerosus

    Pan troglodytes vellerosus

    • Public DB hit
      GI:265385474
      FJ788209
    • Hit length
      1,012 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 66
      100% cov
      FJ788209
      1.88% cov
    • Alignment Length
      19 bp
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
67
Length
18
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:28380636
      NG_000007
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      81,706 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 67
      100% cov
      NG_000007
      0.02% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332835676
      XM_003312881
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      611 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 67
      100% cov
      XM_003312881
      2.95% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332211531
      XR_120944
      1 of 6 hits reported for Nomascus leucogenys.
    • Hit length
      772 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 67
      100% cov
      XR_120944
      2.33% cov
    • Alignment Length
      18 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297689477
      XM_002822127
    • Hit length
      612 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 67
      100% cov
      XM_002822127
      2.94% cov
    • Alignment Length
      18 bp
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:285026389
      NM_001168847
    • Hit length
      444 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 67
      100% cov
      NM_001168847
      4.05% cov
    • Alignment Length
      18 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:256600241
      NM_001164428
    • Hit length
      471 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 67
      100% cov
      NM_001164428
      3.82% cov
    • Alignment Length
      18 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:298107038
      HM071587
    • Hit length
      616 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 67
      100% cov
      HM071587
      2.92% cov
    • Alignment Length
      18 bp
  • Macaca nemestrina

    Macaca nemestrina

    • Public DB hit
      GI:298107036
      HM071586
      1 of 7 hits reported for Macaca nemestrina.
    • Hit length
      616 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 67
      100% cov
      HM071586
      2.92% cov
    • Alignment Length
      18 bp
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
68
Length
14
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
69
Length
14
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
70
Length
37
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
18 times in PatSeqDB
Tools

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