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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
103 sequences found in this patent (in total)

Displaying 1 - 10 of 103 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
411
Type
nucleotide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557328
      NM_000639
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      1,909 bp
    • E Value
      0E0
    • BLAST Score
      760.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_000639
      21.53% cov
    • Alignment Length
      411 bp
    • CIGAR string
      411M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261860115
      AB528416
      1 of 10 hits reported for synthetic construct.
    • Hit length
      860 bp
    • E Value
      0E0
    • BLAST Score
      760.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AB528416
      47.79% cov
    • Alignment Length
      411 bp
    • CIGAR string
      411M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114565467
      XM_524967
    • Hit length
      1,896 bp
    • E Value
      0E0
    • BLAST Score
      754.6 bits
    • Similarity
      99.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_524967
      21.68% cov
    • Alignment Length
      411 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662704
      XM_002809789
    • Hit length
      1,894 bp
    • E Value
      0E0
    • BLAST Score
      743.5 bits
    • Similarity
      99.27%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002809789
      21.7% cov
    • Alignment Length
      411 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
137
Type
peptide
Locations
Claims, Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557329
      NP_000630
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      281 aa
    • E Value
      1.48E-76
    • BLAST Score
      289.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_000630
      48.75% cov
    • Alignment Length
      137 aa
    • CIGAR string
      137M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:60830321
      AAX36923
      1 of 2 hits reported for synthetic construct.
    • Hit length
      282 aa
    • E Value
      1.65E-76
    • BLAST Score
      289.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAX36923
      48.58% cov
    • Alignment Length
      137 aa
    • CIGAR string
      137M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662705
      XP_002809835
    • Hit length
      280 aa
    • E Value
      3.96E-76
    • BLAST Score
      288.1 bits
    • Similarity
      99.27%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002809835
      48.93% cov
    • Alignment Length
      137 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114565468
      XP_524967
    • Hit length
      280 aa
    • E Value
      4.03E-76
    • BLAST Score
      288.1 bits
    • Similarity
      99.27%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_524967
      48.93% cov
    • Alignment Length
      137 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296229785
      XP_002760408
    • Hit length
      280 aa
    • E Value
      1.32E-75
    • BLAST Score
      286.2 bits
    • Similarity
      98.54%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002760408
      48.93% cov
    • Alignment Length
      137 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219594
      XP_003258938
    • Hit length
      280 aa
    • E Value
      6.7E-74
    • BLAST Score
      280.8 bits
    • Similarity
      99.27%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003258938
      48.93% cov
    • Alignment Length
      137 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136237
      NP_001028010
    • Hit length
      280 aa
    • E Value
      1.69E-73
    • BLAST Score
      279.3 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001028010
      48.93% cov
    • Alignment Length
      137 aa
  • Macaca nemestrina

    Macaca nemestrina

    • Public DB hit
      GI:54039737
      P63306
    • Hit length
      280 aa
    • E Value
      1.69E-73
    • BLAST Score
      279.3 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      P63306
      48.93% cov
    • Alignment Length
      137 aa
  • Cercocebus atys

    Cercocebus atys

    • Public DB hit
      GI:21363029
      Q9BDN1
    • Hit length
      280 aa
    • E Value
      5.92E-73
    • BLAST Score
      277.7 bits
    • Similarity
      97.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      Q9BDN1
      48.93% cov
    • Alignment Length
      137 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301763144
      XP_002916992
    • Hit length
      277 aa
    • E Value
      3.93E-70
    • BLAST Score
      268.1 bits
    • Similarity
      98.54%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002916992
      49.46% cov
    • Alignment Length
      137 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73961361
      XP_854009
    • Hit length
      286 aa
    • E Value
      4.5E-69
    • BLAST Score
      264.6 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_854009
      47.9% cov
    • Alignment Length
      137 aa
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57163899
      NP_001009352
    • Hit length
      280 aa
    • E Value
      8E-69
    • BLAST Score
      263.8 bits
    • Similarity
      97.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001009352
      48.93% cov
    • Alignment Length
      137 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:47523228
      NP_998971
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      282 aa
    • E Value
      8.07E-68
    • BLAST Score
      260.4 bits
    • Similarity
      94.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_998971
      48.58% cov
    • Alignment Length
      137 aa
Occurrence
21 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
414
Type
nucleotide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557328
      NM_000639
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      1,909 bp
    • E Value
      0E0
    • BLAST Score
      765.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_000639
      21.69% cov
    • Alignment Length
      414 bp
    • CIGAR string
      414M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261860115
      AB528416
      1 of 10 hits reported for synthetic construct.
    • Hit length
      860 bp
    • E Value
      0E0
    • BLAST Score
      765.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB528416
      48.14% cov
    • Alignment Length
      414 bp
    • CIGAR string
      414M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114565467
      XM_524967
    • Hit length
      1,896 bp
    • E Value
      0E0
    • BLAST Score
      760.1 bits
    • Similarity
      99.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_524967
      21.84% cov
    • Alignment Length
      414 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662704
      XM_002809789
    • Hit length
      1,894 bp
    • E Value
      0E0
    • BLAST Score
      749 bits
    • Similarity
      99.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002809789
      21.86% cov
    • Alignment Length
      414 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219593
      XM_003258890
    • Hit length
      1,094 bp
    • E Value
      0E0
    • BLAST Score
      732.4 bits
    • Similarity
      98.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003258890
      37.84% cov
    • Alignment Length
      414 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
138
Type
peptide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557329
      NP_000630
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      281 aa
    • E Value
      2.75E-77
    • BLAST Score
      292 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_000630
      49.11% cov
    • Alignment Length
      138 aa
    • CIGAR string
      138M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:60830321
      AAX36923
      1 of 2 hits reported for synthetic construct.
    • Hit length
      282 aa
    • E Value
      3.07E-77
    • BLAST Score
      292 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAX36923
      48.94% cov
    • Alignment Length
      138 aa
    • CIGAR string
      138M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114565468
      XP_524967
    • Hit length
      280 aa
    • E Value
      6.67E-77
    • BLAST Score
      290.8 bits
    • Similarity
      99.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_524967
      49.29% cov
    • Alignment Length
      138 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662705
      XP_002809835
    • Hit length
      280 aa
    • E Value
      7.88E-77
    • BLAST Score
      290.4 bits
    • Similarity
      99.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002809835
      49.29% cov
    • Alignment Length
      138 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296229785
      XP_002760408
    • Hit length
      280 aa
    • E Value
      2.66E-76
    • BLAST Score
      288.5 bits
    • Similarity
      98.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002760408
      49.29% cov
    • Alignment Length
      138 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219594
      XP_003258938
    • Hit length
      280 aa
    • E Value
      1.25E-74
    • BLAST Score
      283.1 bits
    • Similarity
      99.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003258938
      49.29% cov
    • Alignment Length
      138 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136237
      NP_001028010
    • Hit length
      280 aa
    • E Value
      2.67E-74
    • BLAST Score
      282 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001028010
      49.29% cov
    • Alignment Length
      138 aa
  • Macaca nemestrina

    Macaca nemestrina

    • Public DB hit
      GI:54039737
      P63306
    • Hit length
      280 aa
    • E Value
      2.67E-74
    • BLAST Score
      282 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      P63306
      49.29% cov
    • Alignment Length
      138 aa
  • Cercocebus atys

    Cercocebus atys

    • Public DB hit
      GI:21363029
      Q9BDN1
    • Hit length
      280 aa
    • E Value
      1.01E-73
    • BLAST Score
      280 bits
    • Similarity
      97.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      Q9BDN1
      49.29% cov
    • Alignment Length
      138 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301763144
      XP_002916992
    • Hit length
      277 aa
    • E Value
      7.7E-71
    • BLAST Score
      270.4 bits
    • Similarity
      98.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002916992
      49.82% cov
    • Alignment Length
      138 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73961361
      XP_854009
    • Hit length
      286 aa
    • E Value
      8.95E-70
    • BLAST Score
      266.9 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_854009
      48.25% cov
    • Alignment Length
      138 aa
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57163899
      NP_001009352
    • Hit length
      280 aa
    • E Value
      1.51E-69
    • BLAST Score
      266.2 bits
    • Similarity
      97.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001009352
      49.29% cov
    • Alignment Length
      138 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:15408574
      BAB64291
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      282 aa
    • E Value
      1.44E-68
    • BLAST Score
      263.1 bits
    • Similarity
      94.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BAB64291
      48.94% cov
    • Alignment Length
      138 aa
Occurrence
44 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
537
Type
nucleotide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557328
      NM_000639
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      1,909 bp
    • E Value
      0E0
    • BLAST Score
      992.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_000639
      28.13% cov
    • Alignment Length
      537 bp
    • CIGAR string
      537M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261860115
      AB528416
      1 of 10 hits reported for synthetic construct.
    • Hit length
      860 bp
    • E Value
      0E0
    • BLAST Score
      992.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB528416
      62.44% cov
    • Alignment Length
      537 bp
    • CIGAR string
      537M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114565467
      XM_524967
    • Hit length
      1,896 bp
    • E Value
      0E0
    • BLAST Score
      987.2 bits
    • Similarity
      99.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_524967
      28.32% cov
    • Alignment Length
      537 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662704
      XM_002809789
    • Hit length
      1,894 bp
    • E Value
      0E0
    • BLAST Score
      965.1 bits
    • Similarity
      99.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002809789
      28.35% cov
    • Alignment Length
      537 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219593
      XM_003258890
    • Hit length
      1,094 bp
    • E Value
      0E0
    • BLAST Score
      942.9 bits
    • Similarity
      98.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003258890
      49.09% cov
    • Alignment Length
      537 bp
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
179
Type
peptide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:60830321
      AAX36923
      1 of 2 hits reported for synthetic construct.
    • Hit length
      282 aa
    • E Value
      1.17E-101
    • BLAST Score
      373.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAX36923
      63.48% cov
    • Alignment Length
      179 aa
    • CIGAR string
      179M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557329
      NP_000630
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      281 aa
    • E Value
      1.55E-101
    • BLAST Score
      372.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_000630
      63.7% cov
    • Alignment Length
      179 aa
    • CIGAR string
      179M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114565468
      XP_524967
    • Hit length
      280 aa
    • E Value
      3.66E-101
    • BLAST Score
      371.3 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_524967
      63.93% cov
    • Alignment Length
      179 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662705
      XP_002809835
    • Hit length
      280 aa
    • E Value
      1.96E-100
    • BLAST Score
      369 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002809835
      63.93% cov
    • Alignment Length
      179 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219594
      XP_003258938
    • Hit length
      280 aa
    • E Value
      2.2E-98
    • BLAST Score
      362.1 bits
    • Similarity
      98.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003258938
      63.93% cov
    • Alignment Length
      179 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136237
      NP_001028010
    • Hit length
      280 aa
    • E Value
      2.78E-97
    • BLAST Score
      358.6 bits
    • Similarity
      97.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001028010
      63.93% cov
    • Alignment Length
      179 aa
  • Macaca nemestrina

    Macaca nemestrina

    • Public DB hit
      GI:54039737
      P63306
    • Hit length
      280 aa
    • E Value
      2.78E-97
    • BLAST Score
      358.6 bits
    • Similarity
      97.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      P63306
      63.93% cov
    • Alignment Length
      179 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296229785
      XP_002760408
    • Hit length
      280 aa
    • E Value
      7.96E-97
    • BLAST Score
      357.1 bits
    • Similarity
      96.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002760408
      63.93% cov
    • Alignment Length
      179 aa
  • Cercocebus atys

    Cercocebus atys

    • Public DB hit
      GI:21363029
      Q9BDN1
    • Hit length
      280 aa
    • E Value
      9.49E-97
    • BLAST Score
      356.7 bits
    • Similarity
      96.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      Q9BDN1
      63.93% cov
    • Alignment Length
      179 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301763144
      XP_002916992
    • Hit length
      277 aa
    • E Value
      6.31E-92
    • BLAST Score
      340.9 bits
    • Similarity
      96.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002916992
      64.62% cov
    • Alignment Length
      179 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297469626
      XP_001253720
      1 of 2 hits reported for Bos taurus.
    • Hit length
      211 aa
    • E Value
      2.34E-90
    • BLAST Score
      335.5 bits
    • Similarity
      94.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001253720
      84.83% cov
    • Alignment Length
      179 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73961361
      XP_854009
    • Hit length
      286 aa
    • E Value
      8.39E-90
    • BLAST Score
      333.6 bits
    • Similarity
      95.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_854009
      62.59% cov
    • Alignment Length
      179 aa
Occurrence
108 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
843
Type
nucleotide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557328
      NM_000639
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      1,909 bp
    • E Value
      0E0
    • BLAST Score
      1,557.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_000639
      44.16% cov
    • Alignment Length
      843 bp
    • CIGAR string
      843M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261860115
      AB528416
      1 of 10 hits reported for synthetic construct.
    • Hit length
      860 bp
    • E Value
      0E0
    • BLAST Score
      1,557.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB528416
      98.02% cov
    • Alignment Length
      843 bp
    • CIGAR string
      843M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114565467
      XM_524967
    • Hit length
      1,896 bp
    • E Value
      0E0
    • BLAST Score
      1,526.5 bits
    • Similarity
      99.41%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_524967
      44.3% cov
    • Alignment Length
      843 bp
    • CIGAR string
      168M3D2MN282MN386M mismatches: 2 - insertions: 0 - deletions: 3
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662704
      XM_002809789
    • Hit length
      1,894 bp
    • E Value
      0E0
    • BLAST Score
      1,471.1 bits
    • Similarity
      98.22%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002809789
      44.35% cov
    • Alignment Length
      843 bp
    • CIGAR string
      62MN80MN4M2N2MN15M3D56MN9MN77MN49MN90MN133MN236MN15M mismatches: 12 - insertions: 0 - deletions: 3
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219593
      XM_003258890
    • Hit length
      1,094 bp
    • E Value
      0E0
    • BLAST Score
      1,454.4 bits
    • Similarity
      97.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003258890
      76.78% cov
    • Alignment Length
      843 bp
    • CIGAR string
      99MN43MN5MN2MN15M3D8MN31MN149MN3MN50MN39MN3MN138MN36MN142MN47MN15M mismatches: 15 - insertions: 0 - deletions: 3
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
281
Type
peptide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:60830321
      AAX36923
      1 of 2 hits reported for synthetic construct.
    • Hit length
      282 aa
    • E Value
      3.53E-160
    • BLAST Score
      568.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AAX36923
      99.65% cov
    • Alignment Length
      281 aa
    • CIGAR string
      281M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557329
      NP_000630
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      281 aa
    • E Value
      3.65E-160
    • BLAST Score
      568.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_000630
      100% cov
    • Alignment Length
      281 aa
    • CIGAR string
      281M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114565468
      XP_524967
    • Hit length
      280 aa
    • E Value
      1.1E-141
    • BLAST Score
      507.7 bits
    • Similarity
      98.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_524967
      100% cov
    • Alignment Length
      281 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219594
      XP_003258938
    • Hit length
      280 aa
    • E Value
      1.42E-139
    • BLAST Score
      500.7 bits
    • Similarity
      98.22%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003258938
      100% cov
    • Alignment Length
      281 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662705
      XP_002809835
    • Hit length
      280 aa
    • E Value
      1.9E-139
    • BLAST Score
      500.4 bits
    • Similarity
      97.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002809835
      100% cov
    • Alignment Length
      281 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136237
      NP_001028010
    • Hit length
      280 aa
    • E Value
      7.16E-139
    • BLAST Score
      498.4 bits
    • Similarity
      97.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001028010
      100% cov
    • Alignment Length
      281 aa
  • Macaca nemestrina

    Macaca nemestrina

    • Public DB hit
      GI:54039737
      P63306
    • Hit length
      280 aa
    • E Value
      7.16E-139
    • BLAST Score
      498.4 bits
    • Similarity
      95.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      P63306
      100% cov
    • Alignment Length
      281 aa
  • Cercocebus atys

    Cercocebus atys

    • Public DB hit
      GI:21363029
      Q9BDN1
    • Hit length
      280 aa
    • E Value
      2.57E-138
    • BLAST Score
      496.5 bits
    • Similarity
      97.15%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      Q9BDN1
      100% cov
    • Alignment Length
      281 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296229785
      XP_002760408
    • Hit length
      280 aa
    • E Value
      1.57E-136
    • BLAST Score
      490.3 bits
    • Similarity
      96.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002760408
      100% cov
    • Alignment Length
      281 aa
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57163899
      NP_001009352
    • Hit length
      280 aa
    • E Value
      2.62E-126
    • BLAST Score
      456.4 bits
    • Similarity
      93.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001009352
      100% cov
    • Alignment Length
      281 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73961361
      XP_854009
    • Hit length
      286 aa
    • E Value
      9.96E-125
    • BLAST Score
      451.4 bits
    • Similarity
      92.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_854009
      100% cov
    • Alignment Length
      286 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301763144
      XP_002916992
    • Hit length
      277 aa
    • E Value
      2.13E-124
    • BLAST Score
      450.3 bits
    • Similarity
      92.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002916992
      100% cov
    • Alignment Length
      281 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:47523228
      NP_998971
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      282 aa
    • E Value
      2.76E-120
    • BLAST Score
      436.4 bits
    • Similarity
      88.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_998971
      100% cov
    • Alignment Length
      282 aa
Occurrence
897 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
411
Type
nucleotide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:6978524
      NM_012908
    • Hit length
      1,623 bp
    • E Value
      0E0
    • BLAST Score
      760.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_012908
      25.32% cov
    • Alignment Length
      411 bp
    • CIGAR string
      411M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:1389771
      U58995
      1 of 14 hits reported for Mus musculus.
    • Hit length
      885 bp
    • E Value
      0E0
    • BLAST Score
      654.8 bits
    • Similarity
      95.39%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      U58995
      46.44% cov
    • Alignment Length
      412 bp
    • CIGAR string
      11MN16MN42MN3MN28MN14MN2MN55MN11MN23MN38MN6MN14MN26MN11MN9MIMD69MN5MN9M mismatches: 17 - insertions: 1 - deletions: 1
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:913759
      S76752
    • Hit length
      1,601 bp
    • E Value
      1.16E-179
    • BLAST Score
      638.2 bits
    • Similarity
      94.66%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      S76752
      25.67% cov
    • Alignment Length
      412 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219593
      XM_003258890
    • Hit length
      1,094 bp
    • E Value
      9.6E-131
    • BLAST Score
      475.7 bits
    • Similarity
      87.8%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 9
      99.03% cov
      XM_003258890
      37.2% cov
    • Alignment Length
      410 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301763143
      XM_002916946
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      894 bp
    • E Value
      4.47E-129
    • BLAST Score
      470.2 bits
    • Similarity
      87.62%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 9
      99.03% cov
      XM_002916946
      45.53% cov
    • Alignment Length
      412 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114565467
      XM_524967
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,896 bp
    • E Value
      4.47E-129
    • BLAST Score
      470.2 bits
    • Similarity
      87.53%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 9
      99.03% cov
      XM_524967
      21.47% cov
    • Alignment Length
      409 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557328
      NM_000639
    • Hit length
      1,909 bp
    • E Value
      2.08E-127
    • BLAST Score
      464.6 bits
    • Similarity
      87.29%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 9
      99.03% cov
      NM_000639
      21.32% cov
    • Alignment Length
      409 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261860115
      AB528416
    • Hit length
      860 bp
    • E Value
      2.08E-127
    • BLAST Score
      464.6 bits
    • Similarity
      87.29%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 9
      99.03% cov
      AB528416
      47.33% cov
    • Alignment Length
      409 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
137
Type
peptide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:6978525
      NP_037040
    • Hit length
      278 aa
    • E Value
      2.74E-76
    • BLAST Score
      288.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_037040
      49.28% cov
    • Alignment Length
      137 aa
    • CIGAR string
      137M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:1389772
      AAB02915
      1 of 4 hits reported for Mus musculus.
    • Hit length
      279 aa
    • E Value
      7.6E-72
    • BLAST Score
      273.9 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAB02915
      49.1% cov
    • Alignment Length
      137 aa
    • CIGAR string
      9MN49MN3MN7MN12MN23MN28M mismatches: 6 - insertions: 0 - deletions: 0
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57163899
      NP_001009352
    • Hit length
      280 aa
    • E Value
      4.51E-63
    • BLAST Score
      244.6 bits
    • Similarity
      91.91%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      NP_001009352
      48.57% cov
    • Alignment Length
      136 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73961361
      XP_854009
    • Hit length
      286 aa
    • E Value
      4.74E-63
    • BLAST Score
      244.6 bits
    • Similarity
      92.65%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      XP_854009
      47.55% cov
    • Alignment Length
      136 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301763144
      XP_002916992
    • Hit length
      277 aa
    • E Value
      6.29E-63
    • BLAST Score
      244.2 bits
    • Similarity
      91.91%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      XP_002916992
      49.1% cov
    • Alignment Length
      136 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136237
      NP_001028010
    • Hit length
      280 aa
    • E Value
      9.79E-63
    • BLAST Score
      243.4 bits
    • Similarity
      91.18%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      NP_001028010
      48.57% cov
    • Alignment Length
      136 aa
  • Macaca nemestrina

    Macaca nemestrina

    • Public DB hit
      GI:54039737
      P63306
    • Hit length
      280 aa
    • E Value
      9.79E-63
    • BLAST Score
      243.4 bits
    • Similarity
      91.18%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      P63306
      48.57% cov
    • Alignment Length
      136 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662705
      XP_002809835
    • Hit length
      280 aa
    • E Value
      1.34E-62
    • BLAST Score
      243 bits
    • Similarity
      91.18%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      XP_002809835
      48.57% cov
    • Alignment Length
      136 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114565468
      XP_524967
    • Hit length
      280 aa
    • E Value
      1.66E-62
    • BLAST Score
      242.7 bits
    • Similarity
      91.18%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      XP_524967
      48.57% cov
    • Alignment Length
      136 aa
  • Cercocebus atys

    Cercocebus atys

    • Public DB hit
      GI:21363029
      Q9BDN1
    • Hit length
      280 aa
    • E Value
      2.95E-62
    • BLAST Score
      241.9 bits
    • Similarity
      90.44%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      Q9BDN1
      48.57% cov
    • Alignment Length
      136 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332219594
      XP_003258938
    • Hit length
      280 aa
    • E Value
      5.24E-62
    • BLAST Score
      241.1 bits
    • Similarity
      91.18%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      XP_003258938
      48.57% cov
    • Alignment Length
      136 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:15408574
      BAB64291
    • Hit length
      282 aa
    • E Value
      5.94E-62
    • BLAST Score
      241.1 bits
    • Similarity
      89.71%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      BAB64291
      48.23% cov
    • Alignment Length
      136 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296229785
      XP_002760408
    • Hit length
      280 aa
    • E Value
      6.04E-62
    • BLAST Score
      241.1 bits
    • Similarity
      90.44%
    • Coverage
      99.27%
    • Alignment (schematic)

      SEQ ID NO 10
      99.27% cov
      XP_002760408
      48.57% cov
    • Alignment Length
      136 aa
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder

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