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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
38 sequences found in this patent (in total)

Displaying 1 - 10 of 38 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
2,718
Type
nucleotide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Mus musculus

Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
322
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:7657220
      NP_056605
      1 of 2 hits reported for Mus musculus.
    • Hit length
      322 aa
    • E Value
      0E0
    • BLAST Score
      669.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_056605
      100% cov
    • Alignment Length
      322 aa
    • CIGAR string
      322M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:293344880
      XP_001079346
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      318 aa
    • E Value
      1.3E-96
    • BLAST Score
      358.2 bits
    • Similarity
      76%
    • Coverage
      90.99%
    • Alignment (schematic)

      SEQ ID NO 2
      90.99% cov
      XP_001079346
      94.03% cov
    • Alignment Length
      300 aa
    • CIGAR string
      26H4MN6M2N3M6N2MN5MNMNMNM2NMNMN2MNM2N7MI6N6MN2INM2NMNM2N5MN3MNMN2MNMN3MNMN10MNMN2MD3NMNMNMN21MN2MN6MN17MN3MN3M2N9MN6MN4MN3M3N2MN16MNMN4MNI2M2N3MNM4N3MN2I16N2MIMN2M2N5M2N6M3H mismatches: 94 - insertions: 7 - deletions: 1
Occurrence
160 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,759
Type
nucleotide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Mus musculus

Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
347
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:15011418
      AAK77544
      1 of 2 hits reported for Mus musculus.
    • Hit length
      347 aa
    • E Value
      0E0
    • BLAST Score
      720.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAK77544
      100% cov
    • Alignment Length
      347 aa
    • CIGAR string
      347M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:293344880
      XP_001079346
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      318 aa
    • E Value
      4.08E-97
    • BLAST Score
      360.1 bits
    • Similarity
      76.33%
    • Coverage
      84.44%
    • Alignment (schematic)

      SEQ ID NO 4
      84.44% cov
      XP_001079346
      94.03% cov
    • Alignment Length
      300 aa
    • CIGAR string
      26H4MN6M2N3M6N2MN5MNMNMNM2NMNMN2MNM2N7MI6N6MN2INM2NMNM2N5MN3MNMN2MNMN3MNMN10MNMN2MD3NMNMNMN21MN2MN6MN17MN3MN3M2N9MN6MN4MN3MNMN2MN16MNMN4MNI2M2N3MNM4N3MN2I16N2MIMN2M2N5M2N6M28H mismatches: 93 - insertions: 7 - deletions: 1
Occurrence
23 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
953
Type
nucleotide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:6983943
      AF199028
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      1,009 bp
    • E Value
      0E0
    • BLAST Score
      1,761 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AF199028
      94.45% cov
    • Alignment Length
      953 bp
    • CIGAR string
      953M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332872254
      XM_531578
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,149 bp
    • E Value
      0E0
    • BLAST Score
      1,700 bits
    • Similarity
      98.85%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_531578
      82.94% cov
    • Alignment Length
      953 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261860427
      AB528572
      1 of 4 hits reported for synthetic construct.
    • Hit length
      923 bp
    • E Value
      0E0
    • BLAST Score
      1,663.1 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 5
      94.44% cov
      AB528572
      97.51% cov
    • Alignment Length
      900 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297708066
      XM_002830756
    • Hit length
      1,269 bp
    • E Value
      0E0
    • BLAST Score
      1,580 bits
    • Similarity
      97.61%
    • Coverage
      96.64%
    • Alignment (schematic)

      SEQ ID NO 5
      96.64% cov
      XM_002830756
      72.58% cov
    • Alignment Length
      921 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332256611
      XM_003277363
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,111 bp
    • E Value
      0E0
    • BLAST Score
      1,544.9 bits
    • Similarity
      95.91%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003277363
      85.78% cov
    • Alignment Length
      954 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297287423
      XM_002803112
    • Hit length
      1,438 bp
    • E Value
      0E0
    • BLAST Score
      1,402.7 bits
    • Similarity
      94.14%
    • Coverage
      96.64%
    • Alignment (schematic)

      SEQ ID NO 5
      96.64% cov
      XM_002803112
      64.05% cov
    • Alignment Length
      921 bp
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
309
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:6983944
      AAF34739
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      309 aa
    • E Value
      2.21E-180
    • BLAST Score
      636.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAF34739
      100% cov
    • Alignment Length
      309 aa
    • CIGAR string
      309M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114684745
      XP_531578
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      309 aa
    • E Value
      2.75E-177
    • BLAST Score
      626.3 bits
    • Similarity
      99.03%
    • Coverage
      99.68%
    • Alignment (schematic)

      SEQ ID NO 6
      99.68% cov
      XP_531578
      99.68% cov
    • Alignment Length
      308 aa
    • CIGAR string
      91MN35MN16MN47MN41MN73M1H mismatches: 5 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332256612
      XP_003277411
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      309 aa
    • E Value
      8.04E-158
    • BLAST Score
      561.6 bits
    • Similarity
      94.5%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003277411
      100% cov
    • Alignment Length
      309 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297708067
      XP_002830802
    • Hit length
      406 aa
    • E Value
      2.54E-157
    • BLAST Score
      559.7 bits
    • Similarity
      97.39%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 6
      99.03% cov
      XP_002830802
      75.37% cov
    • Alignment Length
      306 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297287424
      XP_002803158
    • Hit length
      460 aa
    • E Value
      2.4E-150
    • BLAST Score
      536.6 bits
    • Similarity
      94.68%
    • Coverage
      91.26%
    • Alignment (schematic)

      SEQ ID NO 6
      91.26% cov
      XP_002803158
      61.3% cov
    • Alignment Length
      282 aa
Occurrence
113 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118131092
      NM_015790
      1 of 6 hits reported for Mus musculus.
    • Hit length
      2,748 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_015790
      0.76% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Saccharopolyspora erythraea NRRL 2338

    Saccharopolyspora erythraea NRRL 2338

    • Public DB hit
      GI:133909243
      AM420293
    • Hit length
      8,212,805 bp
    • E Value
      6.21E0
    • BLAST Score
      34.2 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AM420293
      0% cov
    • Alignment Length
      21 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
31
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
23
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332872257
      XM_003319111
      1 of 8 hits reported for Pan troglodytes.
    • Hit length
      2,893 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003319111
      0.8% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332256613
      XM_003277364
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      1,162 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003277364
      1.98% cov
    • Alignment Length
      23 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297708066
      XM_002830756
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,269 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002830756
      1.81% cov
    • Alignment Length
      23 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:58331247
      NM_015259
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      3,239 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_015259
      0.71% cov
    • Alignment Length
      23 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312152195
      HQ448129
      1 of 4 hits reported for synthetic construct.
    • Hit length
      1,008 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      HQ448129
      2.28% cov
    • Alignment Length
      23 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332872257
      XM_003319111
      1 of 8 hits reported for Pan troglodytes.
    • Hit length
      2,893 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003319111
      0.76% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332256613
      XM_003277364
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      1,162 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003277364
      1.89% cov
    • Alignment Length
      22 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297708066
      XM_002830756
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,269 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002830756
      1.73% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297287423
      XM_002803112
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,438 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002803112
      1.53% cov
    • Alignment Length
      22 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:58331247
      NM_015259
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      3,239 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_015259
      0.68% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312152195
      HQ448129
      1 of 4 hits reported for synthetic construct.
    • Hit length
      1,008 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      HQ448129
      2.18% cov
    • Alignment Length
      22 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder

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