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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
12 sequences found in this patent (in total)

Displaying 1 - 10 of 12 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,330
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Streptococcus pneumoniae SPN034156

    Streptococcus pneumoniae SPN034156

    • Public DB hit
      GI:301795364
      FQ312045
    • Hit length
      2,024,476 bp
    • E Value
      0E0
    • BLAST Score
      2,446.1 bits
    • Similarity
      99.85%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FQ312045
      0.07% cov
    • Alignment Length
      1,331 bp
    • CIGAR string
      57MDMI1271M mismatches: 0 - insertions: 1 - deletions: 1
  • Streptococcus pneumoniae

    Streptococcus pneumoniae

    • Public DB hit
      GI:1575029
      U53509
      1 of 3 hits reported for Streptococcus pneumoniae.
    • Hit length
      1,330 bp
    • E Value
      0E0
    • BLAST Score
      2,446.1 bits
    • Similarity
      99.85%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      U53509
      100% cov
    • Alignment Length
      1,331 bp
    • CIGAR string
      57MDMI1271M mismatches: 0 - insertions: 1 - deletions: 1
  • Streptococcus pneumoniae TCH8431/19A

    Streptococcus pneumoniae TCH8431/19A

    • Public DB hit
      GI:298237097
      CP001993
    • Hit length
      2,088,772 bp
    • E Value
      0E0
    • BLAST Score
      2,440.5 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001993
      0.06% cov
    • Alignment Length
      1,331 bp
    • CIGAR string
      57MDMI1106MN164M mismatches: 1 - insertions: 1 - deletions: 1
  • Streptococcus pneumoniae P1031

    Streptococcus pneumoniae P1031

    • Public DB hit
      GI:225724295
      CP000920
    • Hit length
      2,111,882 bp
    • E Value
      0E0
    • BLAST Score
      2,440.5 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000920
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae R6

    Streptococcus pneumoniae R6

    • Public DB hit
      GI:25307955
      AE007317
    • Hit length
      2,038,615 bp
    • E Value
      0E0
    • BLAST Score
      2,440.5 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AE007317
      0.07% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae ATCC 700669

    Streptococcus pneumoniae ATCC 700669

    • Public DB hit
      GI:220673408
      FM211187
    • Hit length
      2,221,315 bp
    • E Value
      0E0
    • BLAST Score
      2,440.5 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FM211187
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae Hungary19A-6

    Streptococcus pneumoniae Hungary19A-6

    • Public DB hit
      GI:168994879
      CP000936
    • Hit length
      2,245,615 bp
    • E Value
      0E0
    • BLAST Score
      2,440.5 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000936
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae D39

    Streptococcus pneumoniae D39

    • Public DB hit
      GI:116075884
      CP000410
    • Hit length
      2,046,115 bp
    • E Value
      0E0
    • BLAST Score
      2,440.5 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000410
      0.07% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae G54

    Streptococcus pneumoniae G54

    • Public DB hit
      GI:194356312
      CP001015
    • Hit length
      2,078,953 bp
    • E Value
      0E0
    • BLAST Score
      2,436.9 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001015
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae OXC141

    Streptococcus pneumoniae OXC141

    • Public DB hit
      GI:301799149
      FQ312027
    • Hit length
      2,036,867 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FQ312027
      0.07% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae SPN994039

    Streptococcus pneumoniae SPN994039

    • Public DB hit
      GI:301795363
      FQ312044
    • Hit length
      2,025,562 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FQ312044
      0.07% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae SPN034183

    Streptococcus pneumoniae SPN034183

    • Public DB hit
      GI:301795362
      FQ312043
    • Hit length
      2,037,254 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FQ312043
      0.07% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae SPN033038

    Streptococcus pneumoniae SPN033038

    • Public DB hit
      GI:301795361
      FQ312042
    • Hit length
      2,133,496 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FQ312042
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae SPN994038

    Streptococcus pneumoniae SPN994038

    • Public DB hit
      GI:301795360
      FQ312041
    • Hit length
      2,027,108 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FQ312041
      0.07% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae SPN032672

    Streptococcus pneumoniae SPN032672

    • Public DB hit
      GI:301795359
      FQ312039
    • Hit length
      2,131,190 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FQ312039
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae INV104

    Streptococcus pneumoniae INV104

    • Public DB hit
      GI:301793325
      FQ312030
    • Hit length
      2,142,122 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FQ312030
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae 70585

    Streptococcus pneumoniae 70585

    • Public DB hit
      GI:225719968
      CP000918
    • Hit length
      2,184,682 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000918
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae CGSP14

    Streptococcus pneumoniae CGSP14

    • Public DB hit
      GI:182628304
      CP001033
    • Hit length
      2,209,198 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001033
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae 670-6B

    Streptococcus pneumoniae 670-6B

    • Public DB hit
      GI:306483213
      CP002176
    • Hit length
      2,240,045 bp
    • E Value
      0E0
    • BLAST Score
      2,429.5 bits
    • Similarity
      99.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002176
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae Taiwan19F-14

    Streptococcus pneumoniae Taiwan19F-14

    • Public DB hit
      GI:225726369
      CP000921
    • Hit length
      2,112,148 bp
    • E Value
      0E0
    • BLAST Score
      2,429.5 bits
    • Similarity
      99.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000921
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae INV200

    Streptococcus pneumoniae INV200

    • Public DB hit
      GI:301800973
      FQ312029
    • Hit length
      2,093,317 bp
    • E Value
      0E0
    • BLAST Score
      2,423.9 bits
    • Similarity
      99.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FQ312029
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae AP200

    Streptococcus pneumoniae AP200

    • Public DB hit
      GI:306408173
      CP002121
    • Hit length
      2,130,580 bp
    • E Value
      0E0
    • BLAST Score
      2,385.1 bits
    • Similarity
      99.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002121
      0.06% cov
    • Alignment Length
      1,331 bp
  • Streptococcus pneumoniae TIGR4

    Streptococcus pneumoniae TIGR4

    • Public DB hit
      GI:193804931
      AE005672
    • Hit length
      2,160,842 bp
    • E Value
      0E0
    • BLAST Score
      2,385.1 bits
    • Similarity
      99.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AE005672
      0.06% cov
    • Alignment Length
      1,331 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
309
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Streptococcus pneumoniae CGSP14

    Streptococcus pneumoniae CGSP14

    • Public DB hit
      GI:182684593
      YP_001836340
    • Hit length
      313 aa
    • E Value
      6.6E-177
    • BLAST Score
      624.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_001836340
      98.72% cov
    • Alignment Length
      309 aa
    • CIGAR string
      309M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae R6

    Streptococcus pneumoniae R6

    • Public DB hit
      GI:15903537
      NP_359087
    • Hit length
      309 aa
    • E Value
      7.87E-177
    • BLAST Score
      624.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_359087
      100% cov
    • Alignment Length
      309 aa
    • CIGAR string
      309M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae Hungary19A-6

    Streptococcus pneumoniae Hungary19A-6

    • Public DB hit
      GI:169833917
      YP_001695035
      1 of 2 hits reported for Streptococcus pneumoniae Hungary19A-6.
    • Hit length
      309 aa
    • E Value
      2.14E-176
    • BLAST Score
      623.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_001695035
      100% cov
    • Alignment Length
      309 aa
    • CIGAR string
      188MN120M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae TIGR4

    Streptococcus pneumoniae TIGR4

    • Public DB hit
      GI:15901485
      NP_346089
      1 of 2 hits reported for Streptococcus pneumoniae TIGR4.
    • Hit length
      309 aa
    • E Value
      2.14E-176
    • BLAST Score
      623.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_346089
      100% cov
    • Alignment Length
      309 aa
  • Streptococcus pneumoniae SP18-BS74

    Streptococcus pneumoniae SP18-BS74

    • Public DB hit
      GI:149006717
      ZP_01830403
    • Hit length
      309 aa
    • E Value
      4.14E-176
    • BLAST Score
      622.1 bits
    • Similarity
      99.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_01830403
      100% cov
    • Alignment Length
      309 aa
  • Streptococcus pneumoniae G54

    Streptococcus pneumoniae G54

    • Public DB hit
      GI:194398710
      YP_002038265
    • Hit length
      309 aa
    • E Value
      4.24E-176
    • BLAST Score
      622.1 bits
    • Similarity
      99.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_002038265
      100% cov
    • Alignment Length
      309 aa
  • Streptococcus pneumoniae

    Streptococcus pneumoniae

    • Public DB hit
      GI:18252614
      AAL66356
      1 of 3 hits reported for Streptococcus pneumoniae.
    • Hit length
      309 aa
    • E Value
      7.12E-176
    • BLAST Score
      621.3 bits
    • Similarity
      99.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAL66356
      100% cov
    • Alignment Length
      309 aa
  • Streptococcus mitis NCTC 12261

    Streptococcus mitis NCTC 12261

    • Public DB hit
      GI:307707445
      ZP_07643927
    • Hit length
      309 aa
    • E Value
      4.28E-172
    • BLAST Score
      609 bits
    • Similarity
      98.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_07643927
      100% cov
    • Alignment Length
      309 aa
  • Streptococcus pneumoniae JJA

    Streptococcus pneumoniae JJA

    • Public DB hit
      GI:225855080
      YP_002736592
    • Hit length
      309 aa
    • E Value
      8.01E-172
    • BLAST Score
      607.8 bits
    • Similarity
      98.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_002736592
      100% cov
    • Alignment Length
      309 aa
  • Streptococcus mitis SK321

    Streptococcus mitis SK321

    • Public DB hit
      GI:307707024
      ZP_07643821
    • Hit length
      309 aa
    • E Value
      5.84E-171
    • BLAST Score
      605.1 bits
    • Similarity
      98.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_07643821
      100% cov
    • Alignment Length
      309 aa
  • Streptococcus infantis

    Streptococcus infantis

    • Public DB hit
      GI:209867634
      ACI90329
    • Hit length
      309 aa
    • E Value
      1.92E-170
    • BLAST Score
      603.2 bits
    • Similarity
      98.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ACI90329
      100% cov
    • Alignment Length
      309 aa
  • Streptococcus mitis B6

    Streptococcus mitis B6

    • Public DB hit
      GI:289167482
      YP_003445751
    • Hit length
      309 aa
    • E Value
      2.8E-170
    • BLAST Score
      602.8 bits
    • Similarity
      97.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_003445751
      100% cov
    • Alignment Length
      309 aa
  • Streptococcus oralis

    Streptococcus oralis

    • Public DB hit
      GI:209867624
      ACI90324
    • Hit length
      309 aa
    • E Value
      2.85E-170
    • BLAST Score
      602.8 bits
    • Similarity
      98.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ACI90324
      100% cov
    • Alignment Length
      309 aa
Occurrence
113 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Streptococcus pneumoniae 670-6B

    Streptococcus pneumoniae 670-6B

    • Public DB hit
      GI:306483213
      CP002176
    • Hit length
      2,240,045 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002176
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae AP200

    Streptococcus pneumoniae AP200

    • Public DB hit
      GI:306408173
      CP002121
    • Hit length
      2,130,580 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002121
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae INV200

    Streptococcus pneumoniae INV200

    • Public DB hit
      GI:301800973
      FQ312029
    • Hit length
      2,093,317 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312029
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae OXC141

    Streptococcus pneumoniae OXC141

    • Public DB hit
      GI:301799149
      FQ312027
    • Hit length
      2,036,867 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312027
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN034156

    Streptococcus pneumoniae SPN034156

    • Public DB hit
      GI:301795364
      FQ312045
    • Hit length
      2,024,476 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312045
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN994039

    Streptococcus pneumoniae SPN994039

    • Public DB hit
      GI:301795363
      FQ312044
    • Hit length
      2,025,562 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312044
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN034183

    Streptococcus pneumoniae SPN034183

    • Public DB hit
      GI:301795362
      FQ312043
    • Hit length
      2,037,254 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312043
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN033038

    Streptococcus pneumoniae SPN033038

    • Public DB hit
      GI:301795361
      FQ312042
    • Hit length
      2,133,496 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312042
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN994038

    Streptococcus pneumoniae SPN994038

    • Public DB hit
      GI:301795360
      FQ312041
    • Hit length
      2,027,108 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312041
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN032672

    Streptococcus pneumoniae SPN032672

    • Public DB hit
      GI:301795359
      FQ312039
    • Hit length
      2,131,190 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312039
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae INV104

    Streptococcus pneumoniae INV104

    • Public DB hit
      GI:301793325
      FQ312030
    • Hit length
      2,142,122 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312030
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae TCH8431/19A

    Streptococcus pneumoniae TCH8431/19A

    • Public DB hit
      GI:298237097
      CP001993
    • Hit length
      2,088,772 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP001993
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus mitis B6

    Streptococcus mitis B6

    • Public DB hit
      GI:288906474
      FN568063
    • Hit length
      2,146,611 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FN568063
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae Taiwan19F-14

    Streptococcus pneumoniae Taiwan19F-14

    • Public DB hit
      GI:225726369
      CP000921
    • Hit length
      2,112,148 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000921
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae P1031

    Streptococcus pneumoniae P1031

    • Public DB hit
      GI:225724295
      CP000920
    • Hit length
      2,111,882 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000920
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae JJA

    Streptococcus pneumoniae JJA

    • Public DB hit
      GI:225722171
      CP000919
    • Hit length
      2,120,234 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000919
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae 70585

    Streptococcus pneumoniae 70585

    • Public DB hit
      GI:225719968
      CP000918
    • Hit length
      2,184,682 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000918
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae R6

    Streptococcus pneumoniae R6

    • Public DB hit
      GI:25307955
      AE007317
    • Hit length
      2,038,615 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AE007317
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae ATCC 700669

    Streptococcus pneumoniae ATCC 700669

    • Public DB hit
      GI:220673408
      FM211187
    • Hit length
      2,221,315 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FM211187
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae G54

    Streptococcus pneumoniae G54

    • Public DB hit
      GI:194356312
      CP001015
    • Hit length
      2,078,953 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP001015
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae TIGR4

    Streptococcus pneumoniae TIGR4

    • Public DB hit
      GI:193804931
      AE005672
    • Hit length
      2,160,842 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AE005672
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae CGSP14

    Streptococcus pneumoniae CGSP14

    • Public DB hit
      GI:182628304
      CP001033
    • Hit length
      2,209,198 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP001033
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae Hungary19A-6

    Streptococcus pneumoniae Hungary19A-6

    • Public DB hit
      GI:168994879
      CP000936
    • Hit length
      2,245,615 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000936
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae D39

    Streptococcus pneumoniae D39

    • Public DB hit
      GI:116075884
      CP000410
    • Hit length
      2,046,115 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000410
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae

    Streptococcus pneumoniae

    • Public DB hit
      GI:4193353
      AF055088
    • Hit length
      3,142 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AF055088
      0.67% cov
    • Alignment Length
      21 bp
Occurrence
21 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Streptococcus pneumoniae 670-6B

    Streptococcus pneumoniae 670-6B

    • Public DB hit
      GI:306483213
      CP002176
    • Hit length
      2,240,045 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP002176
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae INV200

    Streptococcus pneumoniae INV200

    • Public DB hit
      GI:301800973
      FQ312029
    • Hit length
      2,093,317 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FQ312029
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae OXC141

    Streptococcus pneumoniae OXC141

    • Public DB hit
      GI:301799149
      FQ312027
    • Hit length
      2,036,867 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FQ312027
      0% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae SPN034156

    Streptococcus pneumoniae SPN034156

    • Public DB hit
      GI:301795364
      FQ312045
    • Hit length
      2,024,476 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FQ312045
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN994039

    Streptococcus pneumoniae SPN994039

    • Public DB hit
      GI:301795363
      FQ312044
    • Hit length
      2,025,562 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FQ312044
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN034183

    Streptococcus pneumoniae SPN034183

    • Public DB hit
      GI:301795362
      FQ312043
    • Hit length
      2,037,254 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FQ312043
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN033038

    Streptococcus pneumoniae SPN033038

    • Public DB hit
      GI:301795361
      FQ312042
    • Hit length
      2,133,496 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FQ312042
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN994038

    Streptococcus pneumoniae SPN994038

    • Public DB hit
      GI:301795360
      FQ312041
    • Hit length
      2,027,108 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FQ312041
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae SPN032672

    Streptococcus pneumoniae SPN032672

    • Public DB hit
      GI:301795359
      FQ312039
    • Hit length
      2,131,190 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FQ312039
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae INV104

    Streptococcus pneumoniae INV104

    • Public DB hit
      GI:301793325
      FQ312030
    • Hit length
      2,142,122 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FQ312030
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae TCH8431/19A

    Streptococcus pneumoniae TCH8431/19A

    • Public DB hit
      GI:298237097
      CP001993
    • Hit length
      2,088,772 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP001993
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae Taiwan19F-14

    Streptococcus pneumoniae Taiwan19F-14

    • Public DB hit
      GI:225726369
      CP000921
    • Hit length
      2,112,148 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000921
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae P1031

    Streptococcus pneumoniae P1031

    • Public DB hit
      GI:225724295
      CP000920
    • Hit length
      2,111,882 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000920
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae 70585

    Streptococcus pneumoniae 70585

    • Public DB hit
      GI:225719968
      CP000918
    • Hit length
      2,184,682 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000918
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae R6

    Streptococcus pneumoniae R6

    • Public DB hit
      GI:25307955
      AE007317
    • Hit length
      2,038,615 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AE007317
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae ATCC 700669

    Streptococcus pneumoniae ATCC 700669

    • Public DB hit
      GI:220673408
      FM211187
    • Hit length
      2,221,315 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FM211187
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae G54

    Streptococcus pneumoniae G54

    • Public DB hit
      GI:194356312
      CP001015
    • Hit length
      2,078,953 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP001015
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae CGSP14

    Streptococcus pneumoniae CGSP14

    • Public DB hit
      GI:182628304
      CP001033
    • Hit length
      2,209,198 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP001033
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae Hungary19A-6

    Streptococcus pneumoniae Hungary19A-6

    • Public DB hit
      GI:168994879
      CP000936
    • Hit length
      2,245,615 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000936
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae D39

    Streptococcus pneumoniae D39

    • Public DB hit
      GI:116075884
      CP000410
    • Hit length
      2,046,115 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP000410
      0% cov
    • Alignment Length
      21 bp
  • Streptococcus pneumoniae

    Streptococcus pneumoniae

    • Public DB hit
      GI:3258601
      U40786
      1 of 2 hits reported for Streptococcus pneumoniae.
    • Hit length
      1,900 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      U40786
      1.11% cov
    • Alignment Length
      21 bp
  • Dyadobacter fermentans DSM 18053

    Dyadobacter fermentans DSM 18053

    • Public DB hit
      GI:254946573
      CP001619
    • Hit length
      6,967,790 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      95.24%
    • Alignment (schematic)

      SEQ ID NO 4
      95.24% cov
      CP001619
      0% cov
    • Alignment Length
      20 bp
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
15
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
15
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
15
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
15
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
15
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
15
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Artificial

Determined organism:
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder

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