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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
153 sequences found in this patent (in total)

Displaying 1 - 10 of 153 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
5,140
Type
nucleotide
Locations
Drawings

Declared organism:
Artificial

Determined organism:
  • Cloning vector pGETS109

    Cloning vector pGETS109

    • Public DB hit
      GI:38044074
      AB117035
    • Hit length
      12,485 bp
    • E Value
      0E0
    • BLAST Score
      4,242.9 bits
    • Similarity
      100%
    • Coverage
      44.69%
    • Alignment (schematic)

      SEQ ID NO 1
      44.69% cov
      AB117035
      18.4% cov
    • Alignment Length
      2,297 bp
    • CIGAR string
      2843H2297M mismatches: 0 - insertions: 0 - deletions: 0
  • unidentified cloning vector

    unidentified cloning vector

    • Public DB hit
      GI:208909
      M59367
    • Hit length
      2,846 bp
    • E Value
      0E0
    • BLAST Score
      4,237.3 bits
    • Similarity
      99.74%
    • Coverage
      44.98%
    • Alignment (schematic)

      SEQ ID NO 1
      44.98% cov
      M59367
      81.24% cov
    • Alignment Length
      2,313 bp
    • CIGAR string
      2828H4MN4MI2MN3M2N2MD2292M mismatches: 4 - insertions: 1 - deletions: 1
  • Integrative promoter probe vector pTP2

    Integrative promoter probe vector pTP2

    • Public DB hit
      GI:117979214
      EF061140
    • Hit length
      10,142 bp
    • E Value
      0E0
    • BLAST Score
      4,235.5 bits
    • Similarity
      100%
    • Coverage
      44.61%
    • Alignment (schematic)

      SEQ ID NO 1
      44.61% cov
      EF061140
      22.61% cov
    • Alignment Length
      2,293 bp
    • CIGAR string
      2847H2293M mismatches: 0 - insertions: 0 - deletions: 0
  • Integrative promoter probe vector pPP2

    Integrative promoter probe vector pPP2

    • Public DB hit
      GI:117979208
      EF061139
    • Hit length
      10,180 bp
    • E Value
      0E0
    • BLAST Score
      4,235.5 bits
    • Similarity
      100%
    • Coverage
      44.61%
    • Alignment (schematic)

      SEQ ID NO 1
      44.61% cov
      EF061139
      22.52% cov
    • Alignment Length
      2,293 bp
  • Integrative translation probe vector pTP1

    Integrative translation probe vector pTP1

    • Public DB hit
      GI:91983327
      DQ431185
    • Hit length
      10,164 bp
    • E Value
      0E0
    • BLAST Score
      4,235.5 bits
    • Similarity
      100%
    • Coverage
      44.61%
    • Alignment (schematic)

      SEQ ID NO 1
      44.61% cov
      DQ431185
      22.56% cov
    • Alignment Length
      2,293 bp
  • Integrative promoter probe vector pPP1

    Integrative promoter probe vector pPP1

    • Public DB hit
      GI:91983321
      DQ431184
    • Hit length
      10,228 bp
    • E Value
      0E0
    • BLAST Score
      4,235.5 bits
    • Similarity
      100%
    • Coverage
      44.61%
    • Alignment (schematic)

      SEQ ID NO 1
      44.61% cov
      DQ431184
      22.42% cov
    • Alignment Length
      2,293 bp
  • Cloning vector pXPG

    Cloning vector pXPG

    • Public DB hit
      GI:45737861
      AF262031
    • Hit length
      6,087 bp
    • E Value
      0E0
    • BLAST Score
      4,235.5 bits
    • Similarity
      99.96%
    • Coverage
      44.67%
    • Alignment (schematic)

      SEQ ID NO 1
      44.67% cov
      AF262031
      37.72% cov
    • Alignment Length
      2,296 bp
  • MMTV-luciferase reporter vector pHH Luc

    MMTV-luciferase reporter vector pHH Luc

    • Public DB hit
      GI:3929283
      AF093686
    • Hit length
      6,505 bp
    • E Value
      0E0
    • BLAST Score
      4,235.5 bits
    • Similarity
      100%
    • Coverage
      44.61%
    • Alignment (schematic)

      SEQ ID NO 1
      44.61% cov
      AF093686
      35.25% cov
    • Alignment Length
      2,293 bp
  • Luciferase reporter vector pXP1

    Luciferase reporter vector pXP1

    • Public DB hit
      GI:3929277
      AF093683
    • Hit length
      6,163 bp
    • E Value
      0E0
    • BLAST Score
      4,235.5 bits
    • Similarity
      100%
    • Coverage
      44.61%
    • Alignment (schematic)

      SEQ ID NO 1
      44.61% cov
      AF093683
      37.21% cov
    • Alignment Length
      2,293 bp
  • Luciferase reporter vector pXP2

    Luciferase reporter vector pXP2

    • Public DB hit
      GI:3929275
      AF093682
    • Hit length
      6,163 bp
    • E Value
      0E0
    • BLAST Score
      4,235.5 bits
    • Similarity
      100%
    • Coverage
      44.61%
    • Alignment (schematic)

      SEQ ID NO 1
      44.61% cov
      AF093682
      37.21% cov
    • Alignment Length
      2,293 bp
  • Cloning vector pTUY1H

    Cloning vector pTUY1H

    • Public DB hit
      GI:313574895
      FR729480
    • Hit length
      6,716 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      99.96%
    • Coverage
      44.67%
    • Alignment (schematic)

      SEQ ID NO 1
      44.67% cov
      FR729480
      34.17% cov
    • Alignment Length
      2,296 bp
  • Cloning vector pLR3

    Cloning vector pLR3

    • Public DB hit
      GI:310686583
      HQ007051
    • Hit length
      6,270 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      HQ007051
      36.56% cov
    • Alignment Length
      2,292 bp
  • Cloning vector pCFPamy

    Cloning vector pCFPamy

    • Public DB hit
      GI:306491164
      HM204939
    • Hit length
      7,265 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      HM204939
      31.55% cov
    • Alignment Length
      2,292 bp
  • Cloning vector pYFPamy

    Cloning vector pYFPamy

    • Public DB hit
      GI:306491156
      HM204937
    • Hit length
      7,420 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      HM204937
      30.89% cov
    • Alignment Length
      2,292 bp
  • Cloning vector pGFPamy

    Cloning vector pGFPamy

    • Public DB hit
      GI:306491148
      HM204935
    • Hit length
      7,390 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      HM204935
      31.01% cov
    • Alignment Length
      2,292 bp
  • Expression vector pBJS001

    Expression vector pBJS001

    • Public DB hit
      GI:241732792
      FJ756409
    • Hit length
      7,089 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      FJ756409
      32.33% cov
    • Alignment Length
      2,292 bp
  • Cloning vector pr8a

    Cloning vector pr8a

    • Public DB hit
      GI:199427735
      FM209526
    • Hit length
      9,041 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      FM209526
      25.35% cov
    • Alignment Length
      2,292 bp
  • Cloning vector prvPtrap

    Cloning vector prvPtrap

    • Public DB hit
      GI:193884055
      AB375112
    • Hit length
      9,423 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      AB375112
      24.32% cov
    • Alignment Length
      2,292 bp
  • Cloning vector pIV10

    Cloning vector pIV10

    • Public DB hit
      GI:91199925
      AM235368
    • Hit length
      4,109 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      AM235368
      55.78% cov
    • Alignment Length
      2,292 bp
  • SIV vector pCLN8

    SIV vector pCLN8

    • Public DB hit
      GI:55982835
      AY817672
    • Hit length
      19,831 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      AY817672
      11.56% cov
    • Alignment Length
      2,292 bp
  • Cloning vector pBR-XJ160

    Cloning vector pBR-XJ160

    • Public DB hit
      GI:42528337
      AY526355
    • Hit length
      14,625 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      AY526355
      15.67% cov
    • Alignment Length
      2,292 bp
  • Cloning vector pSJS1472

    Cloning vector pSJS1472

    • Public DB hit
      GI:66270755
      AY994192
    • Hit length
      9,582 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      AY994192
      23.92% cov
    • Alignment Length
      2,292 bp
  • Cloning vector pFB-ERV

    Cloning vector pFB-ERV

    • Public DB hit
      GI:22786170
      AF264696
    • Hit length
      11,065 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      AF264696
      20.71% cov
    • Alignment Length
      2,292 bp
  • Retroviral signal sequence gene trap vector prvSStrap

    Retroviral signal sequence gene trap vector prvSStrap

    • Public DB hit
      GI:57157778
      AB183485
    • Hit length
      9,910 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      AB183485
      23.13% cov
    • Alignment Length
      2,292 bp
  • Expression and selection vector pKS336

    Expression and selection vector pKS336

    • Public DB hit
      GI:15294078
      AF403737
    • Hit length
      5,368 bp
    • E Value
      0E0
    • BLAST Score
      4,233.6 bits
    • Similarity
      100%
    • Coverage
      44.59%
    • Alignment (schematic)

      SEQ ID NO 1
      44.59% cov
      AF403737
      42.7% cov
    • Alignment Length
      2,292 bp
Occurrence
26 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
77
Type
peptide
Locations
Drawings

Declared organism:
Artificial

Determined organism:
  • Phagemid vector pSFMI-lib

    Phagemid vector pSFMI-lib

    • Public DB hit
      GI:307696844
      ADN85859
    • Hit length
      152 aa
    • E Value
      2.24E-20
    • BLAST Score
      102.8 bits
    • Similarity
      100%
    • Coverage
      64.94%
    • Alignment (schematic)

      SEQ ID NO 2
      64.94% cov
      ADN85859
      32.89% cov
    • Alignment Length
      50 aa
    • CIGAR string
      27H50M mismatches: 0 - insertions: 0 - deletions: 0
  • Phagemid vector pSFMI-pro-lib

    Phagemid vector pSFMI-pro-lib

    • Public DB hit
      GI:307696848
      ADN85862
    • Hit length
      138 aa
    • E Value
      2.53E-20
    • BLAST Score
      102.8 bits
    • Similarity
      100%
    • Coverage
      64.94%
    • Alignment (schematic)

      SEQ ID NO 2
      64.94% cov
      ADN85862
      36.23% cov
    • Alignment Length
      50 aa
    • CIGAR string
      27H50M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:9887077
      AAG01732
      1 of 9 hits reported for synthetic construct.
    • Hit length
      86 aa
    • E Value
      2.71E-20
    • BLAST Score
      102.4 bits
    • Similarity
      98.11%
    • Coverage
      68.83%
    • Alignment (schematic)

      SEQ ID NO 2
      68.83% cov
      AAG01732
      61.63% cov
    • Alignment Length
      53 aa
    • CIGAR string
      24H2MN11MN38M mismatches: 2 - insertions: 0 - deletions: 0
  • Enterobacteria phage M13

    Enterobacteria phage M13

    • Public DB hit
      GI:17426223
      NP_510890
      1 of 2 hits reported for Enterobacteria phage M13.
    • Hit length
      73 aa
    • E Value
      3.81E-20
    • BLAST Score
      102.1 bits
    • Similarity
      98.04%
    • Coverage
      66.23%
    • Alignment (schematic)

      SEQ ID NO 2
      66.23% cov
      NP_510890
      69.86% cov
    • Alignment Length
      51 aa
  • Enterobacteria phage fd

    Enterobacteria phage fd

    • Public DB hit
      GI:61221177
      P69539
      1 of 4 hits reported for Enterobacteria phage fd.
    • Hit length
      73 aa
    • E Value
      1.6E-19
    • BLAST Score
      100.1 bits
    • Similarity
      98.04%
    • Coverage
      66.23%
    • Alignment (schematic)

      SEQ ID NO 2
      66.23% cov
      P69539
      69.86% cov
    • Alignment Length
      51 aa
  • Filamentous phage display vector f88-4

    Filamentous phage display vector f88-4

    • Public DB hit
      GI:8698956
      AAF78530
    • Hit length
      76 aa
    • E Value
      2.2E-19
    • BLAST Score
      99.8 bits
    • Similarity
      100%
    • Coverage
      64.94%
    • Alignment (schematic)

      SEQ ID NO 2
      64.94% cov
      AAF78530
      65.79% cov
    • Alignment Length
      50 aa
  • Enterobacteria phage f1

    Enterobacteria phage f1

    • Public DB hit
      GI:262064158
      ACY07141
      1 of 3 hits reported for Enterobacteria phage f1.
    • Hit length
      73 aa
    • E Value
      4.47E-19
    • BLAST Score
      98.6 bits
    • Similarity
      96.08%
    • Coverage
      66.23%
    • Alignment (schematic)

      SEQ ID NO 2
      66.23% cov
      ACY07141
      69.86% cov
    • Alignment Length
      51 aa
  • Filamentous phage display vector f8-1

    Filamentous phage display vector f8-1

    • Public DB hit
      GI:8698961
      AAF78532
    • Hit length
      73 aa
    • E Value
      4.66E-19
    • BLAST Score
      98.6 bits
    • Similarity
      98.04%
    • Coverage
      66.23%
    • Alignment (schematic)

      SEQ ID NO 2
      66.23% cov
      AAF78532
      69.86% cov
    • Alignment Length
      51 aa
  • Type 88 trypsin release phage display vector f88TR1

    Type 88 trypsin release phage display vector f88TR1

    • Public DB hit
      GI:307776656
      ADN93462
    • Hit length
      82 aa
    • E Value
      4.94E-19
    • BLAST Score
      98.6 bits
    • Similarity
      100%
    • Coverage
      63.64%
    • Alignment (schematic)

      SEQ ID NO 2
      63.64% cov
      ADN93462
      59.76% cov
    • Alignment Length
      49 aa
  • Enterobacteria phage ZJ/2

    Enterobacteria phage ZJ/2

    • Public DB hit
      GI:116668
      P03618
    • Hit length
      50 aa
    • E Value
      1.85E-18
    • BLAST Score
      96.7 bits
    • Similarity
      98%
    • Coverage
      64.94%
    • Alignment (schematic)

      SEQ ID NO 2
      64.94% cov
      P03618
      100% cov
    • Alignment Length
      50 aa
Occurrence
37 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
70
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:283826482
      ADB43569
      1 of 5 hits reported for Sus scrofa.
    • Hit length
      171 aa
    • E Value
      5.26E-35
    • BLAST Score
      151.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ADB43569
      40.94% cov
    • Alignment Length
      70 aa
    • CIGAR string
      70M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281337860
      EFB13444
    • Hit length
      169 aa
    • E Value
      6.88E-35
    • BLAST Score
      151 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EFB13444
      41.42% cov
    • Alignment Length
      70 aa
    • CIGAR string
      70M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:326703753
      AEA06510
      1 of 3 hits reported for Bos taurus.
    • Hit length
      172 aa
    • E Value
      7.41E-35
    • BLAST Score
      151 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AEA06510
      40.7% cov
    • Alignment Length
      70 aa
    • CIGAR string
      70M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692761
      XP_002823704
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      137 aa
    • E Value
      8.19E-35
    • BLAST Score
      151 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002823704
      51.09% cov
    • Alignment Length
      70 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:163659901
      NP_001104754
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      137 aa
    • E Value
      8.19E-35
    • BLAST Score
      151 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001104754
      51.09% cov
    • Alignment Length
      70 aa
  • Cavia porcellus

    Cavia porcellus

    • Public DB hit
      GI:290543535
      NP_001166437
    • Hit length
      130 aa
    • E Value
      1.17E-34
    • BLAST Score
      150.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001166437
      53.85% cov
    • Alignment Length
      70 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:1815685
      AAB47485
    • Hit length
      127 aa
    • E Value
      1.43E-34
    • BLAST Score
      150.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAB47485
      55.12% cov
    • Alignment Length
      70 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73977755
      XP_866935
    • Hit length
      137 aa
    • E Value
      1.49E-34
    • BLAST Score
      149.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_866935
      51.09% cov
    • Alignment Length
      70 aa
Occurrence
776 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
86
Type
peptide
Locations
Drawings

Declared organism:
Homo sapiens

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:30584395
      AAP36446
      1 of 3 hits reported for synthetic construct.
    • Hit length
      111 aa
    • E Value
      8.01E-43
    • BLAST Score
      177.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAP36446
      77.48% cov
    • Alignment Length
      86 aa
    • CIGAR string
      86M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557671
      NP_000198
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      110 aa
    • E Value
      8.35E-43
    • BLAST Score
      177.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_000198
      78.18% cov
    • Alignment Length
      86 aa
    • CIGAR string
      86M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:57113877
      NP_001008996
    • Hit length
      110 aa
    • E Value
      1.05E-42
    • BLAST Score
      177.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001008996
      78.18% cov
    • Alignment Length
      86 aa
    • CIGAR string
      86M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo pygmaeus

    Pongo pygmaeus

    • Public DB hit
      GI:48428254
      Q8HXV2
    • Hit length
      110 aa
    • E Value
      1.06E-42
    • BLAST Score
      177.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      Q8HXV2
      78.18% cov
    • Alignment Length
      86 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332264753
      XP_003281396
    • Hit length
      110 aa
    • E Value
      6.4E-42
    • BLAST Score
      174.5 bits
    • Similarity
      98.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003281396
      78.18% cov
    • Alignment Length
      86 aa
  • Chlorocebus aethiops

    Chlorocebus aethiops

    • Public DB hit
      GI:266362
      P30407
    • Hit length
      110 aa
    • E Value
      6.9E-42
    • BLAST Score
      174.5 bits
    • Similarity
      98.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      P30407
      78.18% cov
    • Alignment Length
      86 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:223965
      1006230A
    • Hit length
      86 aa
    • E Value
      2.45E-41
    • BLAST Score
      172.6 bits
    • Similarity
      98.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      1006230A
      100% cov
    • Alignment Length
      86 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:194272230
      NP_001123565
    • Hit length
      110 aa
    • E Value
      9.56E-38
    • BLAST Score
      160.6 bits
    • Similarity
      90.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001123565
      78.18% cov
    • Alignment Length
      86 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:217418318
      ACK44319
    • Hit length
      110 aa
    • E Value
      3.92E-37
    • BLAST Score
      158.7 bits
    • Similarity
      93.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ACK44319
      78.18% cov
    • Alignment Length
      86 aa
  • Microtus kikuchii

    Microtus kikuchii

    • Public DB hit
      GI:82749736
      ABB89752
    • Hit length
      110 aa
    • E Value
      1.46E-35
    • BLAST Score
      153.3 bits
    • Similarity
      90.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ABB89752
      78.18% cov
    • Alignment Length
      86 aa
  • Mus caroli

    Mus caroli

    • Public DB hit
      GI:82749730
      ABB89749
    • Hit length
      110 aa
    • E Value
      2.2E-35
    • BLAST Score
      152.9 bits
    • Similarity
      89.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ABB89749
      78.18% cov
    • Alignment Length
      86 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6680463
      NP_032413
    • Hit length
      110 aa
    • E Value
      2.38E-35
    • BLAST Score
      152.5 bits
    • Similarity
      89.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_032413
      78.18% cov
    • Alignment Length
      86 aa
  • Apodemus semotus

    Apodemus semotus

    • Public DB hit
      GI:82749728
      ABB89748
    • Hit length
      110 aa
    • E Value
      2.78E-35
    • BLAST Score
      152.5 bits
    • Similarity
      89.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ABB89748
      78.18% cov
    • Alignment Length
      86 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:9506817
      NP_062003
    • Hit length
      110 aa
    • E Value
      2.98E-35
    • BLAST Score
      152.5 bits
    • Similarity
      89.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_062003
      78.18% cov
    • Alignment Length
      86 aa
Occurrence
602 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
51
Type
peptide
Locations
Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Balaenoptera physalus

    Balaenoptera physalus

    • Public DB hit
      GI:54037403
      P67973
    • Hit length
      51 aa
    • E Value
      6.54E-21
    • BLAST Score
      104.8 bits
    • Similarity
      98.04%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      P67973
      100% cov
    • Alignment Length
      51 aa
    • CIGAR string
      29MN21M mismatches: 1 - insertions: 0 - deletions: 0
  • Cricetinae gen. sp.

    Cricetinae gen. sp.

    • Public DB hit
      GI:69316
      INHY
    • Hit length
      51 aa
    • E Value
      8.91E-21
    • BLAST Score
      104.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      INHY
      100% cov
    • Alignment Length
      51 aa
    • CIGAR string
      29MN3MN17M mismatches: 2 - insertions: 0 - deletions: 0
  • Acomys cahirinus

    Acomys cahirinus

    • Public DB hit
      GI:32171956
      P01324
    • Hit length
      51 aa
    • E Value
      1.08E-20
    • BLAST Score
      104 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      P01324
      100% cov
    • Alignment Length
      51 aa
    • CIGAR string
      2MN26MN3MN17M mismatches: 3 - insertions: 0 - deletions: 0
  • Elephas maximus

    Elephas maximus

    • Public DB hit
      GI:32171947
      P01316
    • Hit length
      51 aa
    • E Value
      1.2E-20
    • BLAST Score
      104 bits
    • Similarity
      98.04%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      P01316
      100% cov
    • Alignment Length
      51 aa
  • Elephantidae gen. sp.

    Elephantidae gen. sp.

    • Public DB hit
      GI:69307
      INEL
    • Hit length
      51 aa
    • E Value
      1.2E-20
    • BLAST Score
      104 bits
    • Similarity
      98.04%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      INEL
      100% cov
    • Alignment Length
      51 aa
  • Canavalia ensiformis

    Canavalia ensiformis

    • Public DB hit
      GI:7438602
      A59151
    • Hit length
      51 aa
    • E Value
      2.72E-20
    • BLAST Score
      102.4 bits
    • Similarity
      96.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      A59151
      100% cov
    • Alignment Length
      51 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:3127060
      AAC78289
      1 of 2 hits reported for synthetic construct.
    • Hit length
      54 aa
    • E Value
      4.89E-20
    • BLAST Score
      101.7 bits
    • Similarity
      96.23%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAC78289
      98.15% cov
    • Alignment Length
      53 aa
  • Camelus dromedarius

    Camelus dromedarius

    • Public DB hit
      GI:32171953
      P01320
    • Hit length
      51 aa
    • E Value
      5.77E-20
    • BLAST Score
      101.7 bits
    • Similarity
      94.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      P01320
      100% cov
    • Alignment Length
      51 aa
  • Balaenoptera borealis

    Balaenoptera borealis

    • Public DB hit
      GI:32171944
      P01314
    • Hit length
      51 aa
    • E Value
      6.44E-20
    • BLAST Score
      101.3 bits
    • Similarity
      94.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      P01314
      100% cov
    • Alignment Length
      51 aa
  • Capra hircus

    Capra hircus

    • Public DB hit
      GI:32171950
      P01319
    • Hit length
      51 aa
    • E Value
      8.33E-20
    • BLAST Score
      100.9 bits
    • Similarity
      94.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      P01319
      100% cov
    • Alignment Length
      51 aa
  • Saimiri sciureus

    Saimiri sciureus

    • Public DB hit
      GI:54037399
      P67971
    • Hit length
      51 aa
    • E Value
      1.24E-19
    • BLAST Score
      100.5 bits
    • Similarity
      96.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      P67971
      100% cov
    • Alignment Length
      51 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:494923
      6INS_E
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      50 aa
    • E Value
      2.35E-19
    • BLAST Score
      99.4 bits
    • Similarity
      98.04%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      6INS_E
      100% cov
    • Alignment Length
      51 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:159162253
      1EFE_A
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      60 aa
    • E Value
      3.33E-19
    • BLAST Score
      99 bits
    • Similarity
      85%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      1EFE_A
      100% cov
    • Alignment Length
      60 aa
  • Didelphis virginiana

    Didelphis virginiana

    • Public DB hit
      GI:32172013
      P18109
    • Hit length
      51 aa
    • E Value
      3.71E-19
    • BLAST Score
      99 bits
    • Similarity
      92.16%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      P18109
      100% cov
    • Alignment Length
      51 aa
  • Chinchilla chinchilla

    Chinchilla chinchilla

    • Public DB hit
      GI:60672440
      AAX33326
    • Hit length
      51 aa
    • E Value
      6.28E-19
    • BLAST Score
      98.2 bits
    • Similarity
      96.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAX33326
      100% cov
    • Alignment Length
      51 aa
  • Cairina moschata

    Cairina moschata

    • Public DB hit
      GI:60392458
      P68243
    • Hit length
      51 aa
    • E Value
      2.59E-18
    • BLAST Score
      95.9 bits
    • Similarity
      94%
    • Coverage
      98.04%
    • Alignment (schematic)

      SEQ ID NO 5
      98.04% cov
      P68243
      98.04% cov
    • Alignment Length
      50 aa
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:54041125
      P67968
    • Hit length
      51 aa
    • E Value
      6.18E-18
    • BLAST Score
      94.7 bits
    • Similarity
      92%
    • Coverage
      98.04%
    • Alignment (schematic)

      SEQ ID NO 5
      98.04% cov
      P67968
      98.04% cov
    • Alignment Length
      50 aa
  • Hystrix cristata

    Hystrix cristata

    • Public DB hit
      GI:32171962
      P01328
    • Hit length
      51 aa
    • E Value
      9.22E-18
    • BLAST Score
      94.4 bits
    • Similarity
      90.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      P01328
      100% cov
    • Alignment Length
      51 aa
  • Lagidium viscacia

    Lagidium viscacia

    • Public DB hit
      GI:60672444
      AAX33328
    • Hit length
      51 aa
    • E Value
      3.39E-17
    • BLAST Score
      92.4 bits
    • Similarity
      92.16%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAX33328
      100% cov
    • Alignment Length
      51 aa
Occurrence
61 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
20
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
33 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
20
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
33 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
18
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
26 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
18
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
32 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
18
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
26 times in PatSeqDB
Tools
PatSeq Finder

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