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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
119 sequences found in this patent (in total)

Displaying 1 - 10 of 119 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
4,192
Type
nucleotide
Locations
Detailed Description

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6449467
      AF068625
      1 of 8 hits reported for Mus musculus.
    • Hit length
      4,192 bp
    • E Value
      0E0
    • BLAST Score
      7,738.6 bits
    • Similarity
      99.98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AF068625
      100% cov
    • Alignment Length
      4,192 bp
    • CIGAR string
      4160MN31M mismatches: 1 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:51556224
      NM_001003958
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      4,173 bp
    • E Value
      0E0
    • BLAST Score
      6,010.1 bits
    • Similarity
      95.21%
    • Coverage
      90.86%
    • Alignment (schematic)

      SEQ ID NO 1
      90.86% cov
      NM_001003958
      90.99% cov
    • Alignment Length
      3,823 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194220908
      XM_001502980
    • Hit length
      4,125 bp
    • E Value
      0E0
    • BLAST Score
      4,579 bits
    • Similarity
      88.79%
    • Coverage
      89.77%
    • Alignment (schematic)

      SEQ ID NO 1
      89.77% cov
      XM_001502980
      91.22% cov
    • Alignment Length
      3,819 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:330417959
      NM_001206502
    • Hit length
      10,282 bp
    • E Value
      0E0
    • BLAST Score
      4,438.6 bits
    • Similarity
      88.02%
    • Coverage
      89.81%
    • Alignment (schematic)

      SEQ ID NO 1
      89.81% cov
      NM_001206502
      36.91% cov
    • Alignment Length
      3,832 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73980625
      XM_540110
    • Hit length
      3,822 bp
    • E Value
      0E0
    • BLAST Score
      4,226.3 bits
    • Similarity
      87.71%
    • Coverage
      87.26%
    • Alignment (schematic)

      SEQ ID NO 1
      87.26% cov
      XM_540110
      95.47% cov
    • Alignment Length
      3,703 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:28559066
      NM_022552
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      4,314 bp
    • E Value
      0E0
    • BLAST Score
      4,115.5 bits
    • Similarity
      89.32%
    • Coverage
      78.55%
    • Alignment (schematic)

      SEQ ID NO 1
      78.55% cov
      NM_022552
      76.5% cov
    • Alignment Length
      3,334 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
4,195
Type
nucleotide
Locations
Detailed Description

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6449469
      AF068626
      1 of 12 hits reported for Mus musculus.
    • Hit length
      4,195 bp
    • E Value
      0E0
    • BLAST Score
      7,747.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AF068626
      100% cov
    • Alignment Length
      4,195 bp
    • CIGAR string
      4195M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:51556272
      NM_001003959
    • Hit length
      4,289 bp
    • E Value
      0E0
    • BLAST Score
      4,656.5 bits
    • Similarity
      93.1%
    • Coverage
      75.88%
    • Alignment (schematic)

      SEQ ID NO 2
      75.88% cov
      NM_001003959
      74.26% cov
    • Alignment Length
      3,201 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
4,293
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:28559066
      NM_022552
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      4,314 bp
    • E Value
      0E0
    • BLAST Score
      7,886.3 bits
    • Similarity
      99.86%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 3
      99.93% cov
      NM_022552
      99.35% cov
    • Alignment Length
      4,290 bp
    • CIGAR string
      3394MD13MD5MNMDMN66MD804M3H mismatches: 2 - insertions: 0 - deletions: 4
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332812934
      XM_001148731
    • Hit length
      4,039 bp
    • E Value
      0E0
    • BLAST Score
      6,192.9 bits
    • Similarity
      99.47%
    • Coverage
      79.39%
    • Alignment (schematic)

      SEQ ID NO 3
      79.39% cov
      XM_001148731
      84.33% cov
    • Alignment Length
      3,412 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297265572
      XM_001083358
    • Hit length
      3,947 bp
    • E Value
      0E0
    • BLAST Score
      5,853.2 bits
    • Similarity
      97.61%
    • Coverage
      79.39%
    • Alignment (schematic)

      SEQ ID NO 3
      79.39% cov
      XM_001083358
      86.72% cov
    • Alignment Length
      3,429 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296224353
      XM_002757985
    • Hit length
      4,001 bp
    • E Value
      0E0
    • BLAST Score
      5,350.9 bits
    • Similarity
      95.15%
    • Coverage
      79.39%
    • Alignment (schematic)

      SEQ ID NO 3
      79.39% cov
      XM_002757985
      84.53% cov
    • Alignment Length
      3,424 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332243316
      XM_003270778
    • Hit length
      4,601 bp
    • E Value
      0E0
    • BLAST Score
      5,217.9 bits
    • Similarity
      98.91%
    • Coverage
      68.13%
    • Alignment (schematic)

      SEQ ID NO 3
      68.13% cov
      XM_003270778
      63.4% cov
    • Alignment Length
      2,926 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261859195
      AB527956
      1 of 2 hits reported for synthetic construct.
    • Hit length
      2,753 bp
    • E Value
      0E0
    • BLAST Score
      5,053.6 bits
    • Similarity
      100%
    • Coverage
      63.73%
    • Alignment (schematic)

      SEQ ID NO 3
      63.73% cov
      AB527956
      99.38% cov
    • Alignment Length
      2,736 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194220908
      XM_001502980
    • Hit length
      4,125 bp
    • E Value
      0E0
    • BLAST Score
      4,983.4 bits
    • Similarity
      93.68%
    • Coverage
      77.89%
    • Alignment (schematic)

      SEQ ID NO 3
      77.89% cov
      XM_001502980
      80.61% cov
    • Alignment Length
      3,352 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:330417959
      NM_001206502
    • Hit length
      10,282 bp
    • E Value
      0E0
    • BLAST Score
      4,791.3 bits
    • Similarity
      92.5%
    • Coverage
      77.89%
    • Alignment (schematic)

      SEQ ID NO 3
      77.89% cov
      NM_001206502
      32.7% cov
    • Alignment Length
      3,374 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
4,145
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:5823167
      AF156488
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      4,145 bp
    • E Value
      0E0
    • BLAST Score
      7,655.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AF156488
      100% cov
    • Alignment Length
      4,145 bp
    • CIGAR string
      4145M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858341
      XM_514580
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      4,334 bp
    • E Value
      0E0
    • BLAST Score
      7,402.5 bits
    • Similarity
      99.17%
    • Coverage
      99.13%
    • Alignment (schematic)

      SEQ ID NO 4
      99.13% cov
      XM_514580
      94.85% cov
    • Alignment Length
      4,111 bp
    • CIGAR string
      19H71MN162MN12MN47MN56MN896MN62MN110MN164MN314MN263MN395MN195MN96MN98MN137MN7MN12MN45MN224MN68MN15MN12M2N77MN30MN153MN45MN2MN126M2I47MN35MN88MN13M17H mismatches: 32 - insertions: 2 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249026
      XM_003273616
    • Hit length
      4,063 bp
    • E Value
      0E0
    • BLAST Score
      6,573.3 bits
    • Similarity
      97.3%
    • Coverage
      93.46%
    • Alignment (schematic)

      SEQ ID NO 4
      93.46% cov
      XM_003273616
      95.37% cov
    • Alignment Length
      3,885 bp
    • CIGAR string
      254H60MN56MN32MN119MN48MN103MN122MN512MN17MN79MNM2NM2DN2MN3MI2NM2N2M2I2M2DNM3N2MD2MN4MDMNMI2N3MIM2I3MNM2N2MNM2N3MN2MNMNMD4MN33MN56MN11MN14MN167MN146MN293MN29MN71MN14MN245MN2MN115MN107MN30MIMI7MN9MN19MN48MN187MNMN5MN7MN4MN55MN12MN8MN64MN27MN23MN34MN40MN96MD2M2D30MN44MN79MN25MN21MN5MN21MN5MN21M2N18MN7MN18MN50MN41MN13MN22M2I141MN44M17H mismatches: 84 - insertions: 11 - deletions: 10
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297706861
      XM_002830200
    • Hit length
      3,709 bp
    • E Value
      0E0
    • BLAST Score
      6,525.3 bits
    • Similarity
      98.44%
    • Coverage
      89.46%
    • Alignment (schematic)

      SEQ ID NO 4
      89.46% cov
      XM_002830200
      99.92% cov
    • Alignment Length
      3,712 bp
    • CIGAR string
      420H159MN91MN851MN26MN56MN107MN59MN14MN74MN56MN68MN326MN263MN147MN56MN18MN30MIMI7MN29MN82MN18MD134MNMN5MN3MN12MN21MN15MN8MN19MN99MN23MN27MN7MN33MN5MN97MN33MN5MN38MN15MN89MN4MN16MN42MD13MN16MNMN21MN4MN99MN29M2I137M4D45M17H mismatches: 48 - insertions: 4 - deletions: 6
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296199837
      XM_002747289
    • Hit length
      2,940 bp
    • E Value
      0E0
    • BLAST Score
      4,793.2 bits
    • Similarity
      96.1%
    • Coverage
      70.93%
    • Alignment (schematic)

      SEQ ID NO 4
      70.93% cov
      XM_002747289
      100% cov
    • Alignment Length
      2,946 bp
    • CIGAR string
      114H42MN16MN11MN11MN35MN11MN25MNMN37MN2MN15MN40MN5MN26MN23MN16MN7MN45MN5MN9MN47MN14MNMN7MN14MN7MN14MN2MN2MN12MN3MN2MN44MN3MN4MN34MN64MN26MN11MN29MN5MN228MN120MN42MN3MN17MN34MN28MN21MN56MN56MN53MN8MN47MN15MN31MN8MN2MN44MN3MN13MN20MN35MN62MDMI10MN5MN38MN14MN2MN20MN38MN68MN14MN35MN8MN131MN68MN2MN11MN2MN14MN104MN110MN2MN17MN32MN74MI3MD33MN13MN36MN4MNMN17MN30MIMI7MN4MN7MN7MN8MN25MN20MI5MN29MN11M2N2M2D2MD33MN12MN3MD2MI23M1091H mismatches: 103 - insertions: 6 - deletions: 6
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261857547
      AB527132
      1 of 3 hits reported for synthetic construct.
    • Hit length
      2,576 bp
    • E Value
      0E0
    • BLAST Score
      4,717.5 bits
    • Similarity
      99.92%
    • Coverage
      61.76%
    • Alignment (schematic)

      SEQ ID NO 4
      61.76% cov
      AB527132
      99.38% cov
    • Alignment Length
      2,560 bp
    • CIGAR string
      113H1572MN101MN885M1472H mismatches: 2 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297260030
      XM_001107440
    • Hit length
      3,941 bp
    • E Value
      0E0
    • BLAST Score
      4,684.2 bits
    • Similarity
      97.19%
    • Coverage
      66.66%
    • Alignment (schematic)

      SEQ ID NO 4
      66.66% cov
      XM_001107440
      70.46% cov
    • Alignment Length
      2,778 bp
    • CIGAR string
      1365H47MN47MN11MN50MN26MN32MN23MN104MN155MN24MN28MN14MN8MN185MN185MN14MN248MN186MN11MN24MN30MI2MI6MN2MI2MD24MN30MN68MN2I36MN99MNMN5MN39MN44MN26MN71MN24MN22MN9MI31MN10MN56MN40MNMN12MN18MN8MN7MN27MN11MN67MN25MN11MN9MN5MNMI10MN10M3I2MI14MN11MN18MNMN5MN13MN4MN31MN18MN78M2I31MN12MI10MN34MI97M17H mismatches: 62 - insertions: 15 - deletions: 1
Occurrence
32 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
908
Type
peptide
Locations
Detailed Description

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6681209
      NP_031898
      1 of 2 hits reported for Mus musculus.
    • Hit length
      908 aa
    • E Value
      0E0
    • BLAST Score
      1,884.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_031898
      100% cov
    • Alignment Length
      908 aa
    • CIGAR string
      908M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:51556225
      NP_001003958
    • Hit length
      908 aa
    • E Value
      0E0
    • BLAST Score
      1,875.9 bits
    • Similarity
      99.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001003958
      100% cov
    • Alignment Length
      908 aa
    • CIGAR string
      10MN63MN150MN36MN127MN517M mismatches: 5 - insertions: 0 - deletions: 0
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291387188
      XP_002710120
    • Hit length
      940 aa
    • E Value
      0E0
    • BLAST Score
      1,792.7 bits
    • Similarity
      98.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002710120
      96.7% cov
    • Alignment Length
      909 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149727718
      XP_001503030
    • Hit length
      909 aa
    • E Value
      0E0
    • BLAST Score
      1,786.5 bits
    • Similarity
      97.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001503030
      100% cov
    • Alignment Length
      909 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:12751473
      NP_072046
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      912 aa
    • E Value
      0E0
    • BLAST Score
      1,773.1 bits
    • Similarity
      97.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_072046
      99.67% cov
    • Alignment Length
      909 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301756030
      XP_002913875
    • Hit length
      957 aa
    • E Value
      0E0
    • BLAST Score
      1,769.2 bits
    • Similarity
      96.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002913875
      95.3% cov
    • Alignment Length
      912 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:167774091
      ABZ92480
    • Hit length
      912 aa
    • E Value
      0E0
    • BLAST Score
      1,768.8 bits
    • Similarity
      97.03%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ABZ92480
      99.67% cov
    • Alignment Length
      909 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:330417960
      NP_001193431
      1 of 2 hits reported for Bos taurus.
    • Hit length
      909 aa
    • E Value
      0E0
    • BLAST Score
      1,763.4 bits
    • Similarity
      98.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001193431
      100% cov
    • Alignment Length
      909 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73980626
      XP_540110
    • Hit length
      969 aa
    • E Value
      0E0
    • BLAST Score
      1,740.3 bits
    • Similarity
      97.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_540110
      93.81% cov
    • Alignment Length
      909 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332243317
      XP_003270826
    • Hit length
      891 aa
    • E Value
      0E0
    • BLAST Score
      1,642.5 bits
    • Similarity
      91.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003270826
      100% cov
    • Alignment Length
      923 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334312425
      XP_001380132
    • Hit length
      1,154 aa
    • E Value
      0E0
    • BLAST Score
      1,620.5 bits
    • Similarity
      94.64%
    • Coverage
      96.26%
    • Alignment (schematic)

      SEQ ID NO 5
      96.26% cov
      XP_001380132
      76% cov
    • Alignment Length
      877 aa
Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
859
Type
peptide
Locations
Detailed Description

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:172088099
      NP_001003961
      1 of 9 hits reported for Mus musculus.
    • Hit length
      859 aa
    • E Value
      0E0
    • BLAST Score
      1,789.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001003961
      100% cov
    • Alignment Length
      859 aa
    • CIGAR string
      859M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:51556273
      NP_001003959
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      859 aa
    • E Value
      0E0
    • BLAST Score
      1,576.6 bits
    • Similarity
      96.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001003959
      100% cov
    • Alignment Length
      860 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296199838
      XP_002747335
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      853 aa
    • E Value
      0E0
    • BLAST Score
      1,438.7 bits
    • Similarity
      88.16%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002747335
      100% cov
    • Alignment Length
      870 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301765806
      XP_002918316
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      856 aa
    • E Value
      0E0
    • BLAST Score
      1,436.4 bits
    • Similarity
      89.15%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002918316
      100% cov
    • Alignment Length
      866 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858342
      XP_514580
    • Hit length
      853 aa
    • E Value
      0E0
    • BLAST Score
      1,415.2 bits
    • Similarity
      87.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_514580
      100% cov
    • Alignment Length
      870 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:5901940
      NP_008823
    • Hit length
      853 aa
    • E Value
      0E0
    • BLAST Score
      1,411.4 bits
    • Similarity
      87.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_008823
      100% cov
    • Alignment Length
      870 aa
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
912
Type
peptide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:12751473
      NP_072046
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      912 aa
    • E Value
      0E0
    • BLAST Score
      1,887.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_072046
      100% cov
    • Alignment Length
      912 aa
    • CIGAR string
      912M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:167774091
      ABZ92480
    • Hit length
      912 aa
    • E Value
      0E0
    • BLAST Score
      1,884 bits
    • Similarity
      99.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ABZ92480
      100% cov
    • Alignment Length
      912 aa
    • CIGAR string
      144MN15MN751M mismatches: 2 - insertions: 0 - deletions: 0
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291387188
      XP_002710120
    • Hit length
      940 aa
    • E Value
      0E0
    • BLAST Score
      1,806.2 bits
    • Similarity
      98.36%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002710120
      97.02% cov
    • Alignment Length
      912 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149727718
      XP_001503030
    • Hit length
      909 aa
    • E Value
      0E0
    • BLAST Score
      1,800 bits
    • Similarity
      98.24%
    • Coverage
      99.67%
    • Alignment (schematic)

      SEQ ID NO 7
      99.67% cov
      XP_001503030
      100% cov
    • Alignment Length
      909 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301756030
      XP_002913875
    • Hit length
      957 aa
    • E Value
      0E0
    • BLAST Score
      1,785.8 bits
    • Similarity
      97.16%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002913875
      95.61% cov
    • Alignment Length
      915 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6681209
      NP_031898
      1 of 2 hits reported for Mus musculus.
    • Hit length
      908 aa
    • E Value
      0E0
    • BLAST Score
      1,774.2 bits
    • Similarity
      97.14%
    • Coverage
      99.67%
    • Alignment (schematic)

      SEQ ID NO 7
      99.67% cov
      NP_031898
      100% cov
    • Alignment Length
      909 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:51556225
      NP_001003958
    • Hit length
      908 aa
    • E Value
      0E0
    • BLAST Score
      1,769.6 bits
    • Similarity
      97.03%
    • Coverage
      99.67%
    • Alignment (schematic)

      SEQ ID NO 7
      99.67% cov
      NP_001003958
      100% cov
    • Alignment Length
      909 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:330417960
      NP_001193431
      1 of 2 hits reported for Bos taurus.
    • Hit length
      909 aa
    • E Value
      0E0
    • BLAST Score
      1,766.1 bits
    • Similarity
      98.02%
    • Coverage
      99.67%
    • Alignment (schematic)

      SEQ ID NO 7
      99.67% cov
      NP_001193431
      100% cov
    • Alignment Length
      909 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73980626
      XP_540110
    • Hit length
      969 aa
    • E Value
      0E0
    • BLAST Score
      1,755 bits
    • Similarity
      97.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_540110
      94.12% cov
    • Alignment Length
      912 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332243317
      XP_003270826
    • Hit length
      891 aa
    • E Value
      0E0
    • BLAST Score
      1,705.3 bits
    • Similarity
      93.5%
    • Coverage
      99.67%
    • Alignment (schematic)

      SEQ ID NO 7
      99.67% cov
      XP_003270826
      100% cov
    • Alignment Length
      923 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334312425
      XP_001380132
    • Hit length
      1,154 aa
    • E Value
      0E0
    • BLAST Score
      1,634 bits
    • Similarity
      96.01%
    • Coverage
      95.94%
    • Alignment (schematic)

      SEQ ID NO 7
      95.94% cov
      XP_001380132
      76% cov
    • Alignment Length
      878 aa
Occurrence
196 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
853
Type
peptide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:5901940
      NP_008823
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      853 aa
    • E Value
      0E0
    • BLAST Score
      1,775.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_008823
      100% cov
    • Alignment Length
      853 aa
    • CIGAR string
      853M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332858342
      XP_514580
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      853 aa
    • E Value
      0E0
    • BLAST Score
      1,774.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_514580
      100% cov
    • Alignment Length
      853 aa
    • CIGAR string
      46MN806M mismatches: 1 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296199838
      XP_002747335
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      853 aa
    • E Value
      0E0
    • BLAST Score
      1,678.7 bits
    • Similarity
      98.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002747335
      100% cov
    • Alignment Length
      853 aa
    • CIGAR string
      14MN37MN19MN37MN17MNMN2MN21MN2MN4MN13M3N14M2NMN11MN162MN15MN5MN20MN118MN318M mismatches: 22 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301765806
      XP_002918316
      1 of 3 hits reported for Ailuropoda melanoleuca.
    • Hit length
      856 aa
    • E Value
      0E0
    • BLAST Score
      1,599.7 bits
    • Similarity
      94.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002918316
      100% cov
    • Alignment Length
      860 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297260031
      XP_001107440
    • Hit length
      823 aa
    • E Value
      0E0
    • BLAST Score
      1,596.3 bits
    • Similarity
      94.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001107440
      98.54% cov
    • Alignment Length
      853 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297706862
      XP_002830246
    • Hit length
      751 aa
    • E Value
      0E0
    • BLAST Score
      1,572 bits
    • Similarity
      99.87%
    • Coverage
      88.04%
    • Alignment (schematic)

      SEQ ID NO 8
      88.04% cov
      XP_002830246
      100% cov
    • Alignment Length
      751 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249027
      XP_003273664
    • Hit length
      868 aa
    • E Value
      0E0
    • BLAST Score
      1,567.7 bits
    • Similarity
      97.11%
    • Coverage
      93.2%
    • Alignment (schematic)

      SEQ ID NO 8
      93.2% cov
      XP_003273664
      91.59% cov
    • Alignment Length
      795 aa
Occurrence
85 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
393
Type
nucleotide
Locations
Detailed Description

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:114145580
      NM_007872
      1 of 10 hits reported for Mus musculus.
    • Hit length
      9,735 bp
    • E Value
      0E0
    • BLAST Score
      671.5 bits
    • Similarity
      97.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_007872
      3.99% cov
    • Alignment Length
      394 bp
    • CIGAR string
      215MD8MD2MD6MD5MD6MDMN22MI3MN117M mismatches: 2 - insertions: 1 - deletions: 6
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:51556264
      NM_001003957
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      3,491 bp
    • E Value
      3.41E-105
    • BLAST Score
      390.8 bits
    • Similarity
      93.33%
    • Coverage
      68.7%
    • Alignment (schematic)

      SEQ ID NO 9
      68.7% cov
      NM_001003957
      7.48% cov
    • Alignment Length
      270 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332812934
      XM_001148731
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      4,039 bp
    • E Value
      7.48E-92
    • BLAST Score
      346.4 bits
    • Similarity
      90.94%
    • Coverage
      67.18%
    • Alignment (schematic)

      SEQ ID NO 9
      67.18% cov
      XM_001148731
      6.29% cov
    • Alignment Length
      265 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332243316
      XM_003270778
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      4,601 bp
    • E Value
      7.48E-92
    • BLAST Score
      346.4 bits
    • Similarity
      90.94%
    • Coverage
      67.18%
    • Alignment (schematic)

      SEQ ID NO 9
      67.18% cov
      XM_003270778
      5.52% cov
    • Alignment Length
      265 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297668049
      XM_002812220
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      4,035 bp
    • E Value
      7.48E-92
    • BLAST Score
      346.4 bits
    • Similarity
      90.94%
    • Coverage
      67.18%
    • Alignment (schematic)

      SEQ ID NO 9
      67.18% cov
      XM_002812220
      6.29% cov
    • Alignment Length
      265 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:28559067
      NM_153759
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      3,604 bp
    • E Value
      7.48E-92
    • BLAST Score
      346.4 bits
    • Similarity
      90.94%
    • Coverage
      67.18%
    • Alignment (schematic)

      SEQ ID NO 9
      67.18% cov
      NM_153759
      7.05% cov
    • Alignment Length
      265 bp
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
424
Type
nucleotide
Locations
Detailed Description

Declared organism:
Mus musculus

Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder

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