US 6984623 B2 - Tendon-inducing Compositions - The Lens - Free & Open Patent and Scholarly Search

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Tendon-inducing Compositions

Published: Jan 10, 2006
Family: 37
Cited: 7
Cites: 102
Sequences: 35
Non Patent Citations: 103
Info: Full text Published Sequence

Data obtained from: NCBI GenBank EMBL-EBI Pat DDBJ Pat USPTO Fulltext

35 sequences found in this patent (in total)

Download sequences in fasta format: 14 peptides 21 nucleotides

Displaying 1 - 10 of 35 sequences

SEQ ID NO

Length

Sequence Type

Locations

Declared organism

Determined organism

Occurrence

Tools

SEQ ID NO

Length

926

Sequence Type

nucleotide

Locations

Detailed Description, Drawings, Summary

Declared organism

Not specified

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:40786370
AB158468
1 of 4 hits reported for Homo sapiens.

Hit length
1,456 bp

E Value
0E0

BLAST Score
1,640.9 bits

Similarity

100%

Coverage

95.9%

Alignment (schematic)

SEQ ID NO 1

95.9% cov
AB158468

60.99% cov

Alignment Length
888 bp

CIGAR string
38H888M mismatches: 0 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332812707
XM_003308907

Hit length
2,000 bp

E Value
0E0

BLAST Score
1,596.6 bits

Similarity

99.1%

Coverage

95.9%

Alignment (schematic)

SEQ ID NO 1

95.9% cov
XM_003308907

44.4% cov

Alignment Length
888 bp

CIGAR string
38H35MN119MN84MN51MN46MN23MN45MN70MN407M mismatches: 8 - insertions: 0 - deletions: 0
synthetic construct
synthetic construct
Public DB hit
GI:182887860
BC160118

Hit length
1,414 bp

E Value
0E0

BLAST Score
1,559.7 bits

Similarity

99.88%

Coverage

91.47%

Alignment (schematic)

SEQ ID NO 1

91.47% cov
BC160118

59.9% cov

Alignment Length
847 bp

CIGAR string
38H240MN606M41H mismatches: 1 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297668102
XM_002812249

Hit length
1,995 bp

E Value
0E0

BLAST Score
1,511.7 bits

Similarity

97.41%

Coverage

95.79%

Alignment (schematic)

SEQ ID NO 1

95.79% cov
XM_002812249

44.46% cov

Alignment Length
888 bp

CIGAR string
38H27MIMD73MN17MN72MN19MN4MN21MN15MN35MN46MN23MN28MN23MN45MN30MN59MN58MN36MN28MN32MN32MN41MN100M1H mismatches: 21 - insertions: 1 - deletions: 1
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332253824
XM_003275985

Hit length
2,006 bp

E Value
0E0

BLAST Score
1,508 bits

Similarity

97.3%

Coverage

95.9%

Alignment (schematic)

SEQ ID NO 1

95.9% cov
XM_003275985

44.27% cov

Alignment Length
888 bp

CIGAR string
38H18MN32MN48MN117MN21MN51MN10MN35MN23MN25MN2MN23MN18MN26MN17MN20MN51MN58MN26MN9MN28MN32MN32MN2MN140M mismatches: 24 - insertions: 0 - deletions: 0
Macaca fascicularis
Macaca fascicularis
Public DB hit
GI:13489042
AF254567

Hit length
2,694 bp

E Value
0E0

BLAST Score
1,375 bits

Similarity

94.7%

Coverage

95.57%

Alignment (schematic)

SEQ ID NO 1

95.57% cov
AF254567

32.85% cov

Alignment Length
886 bp

CIGAR string
38H14MN6MN6MN22MN50MN11MN7MN72MN9MN7MN4MN6MN14M2N35MN14MN40MN11MN17MN17M2N2MN6MN3MN19MN17MN2MD3MI21MN23MN32MN26MN6MN43MN8MN8MN18MN14MN4MN8MN14MN2MN29MN32MN47MN69MN9MN12M3H mismatches: 45 - insertions: 1 - deletions: 1
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297265516
XM_001096970

Hit length
3,147 bp

E Value
0E0

BLAST Score
1,369.5 bits

Similarity

94.58%

Coverage

95.57%

Alignment (schematic)

SEQ ID NO 1

95.57% cov
XM_001096970

28.12% cov

Alignment Length
886 bp

CIGAR string
38H14MN6MN6MN22MN50MN11MN7MN72MN9MN7MN4MN6MN14M2N8MN26MN14MN40MN11MN17MN17M2N2MN6MN3MN19MN17MN2MD3MI21MN23MN32MN26MN6MN43MN8MN8MN18MN14MN4MN8MN14MN2MN29MN32MN47MN69MN9MN12M3H mismatches: 46 - insertions: 1 - deletions: 1
Chlorocebus aethiops
Chlorocebus aethiops
Public DB hit
GI:13568983
AF254569

Hit length
2,169 bp

E Value
0E0

BLAST Score
1,363.9 bits

Similarity

94.46%

Coverage

95.57%

Alignment (schematic)

SEQ ID NO 1

95.57% cov
AF254569

40.8% cov

Alignment Length
885 bp

CIGAR string
38H14MN6MN6MN22MN2MN47MN11MN7MN45MN26MN9MN7MN4MN6MN14MN36MN14MN31MN8MN11MN17MN17M2N2MN6MN3MN19MN17MN2MN24MN23MN32MN26MN6MN43MN8MN8MN18MN14MN4MN23MN2MN11MN17MN5MN26MN47MN69MN9MN12M3H mismatches: 49 - insertions: 0 - deletions: 0
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296224399
XM_002757998

Hit length
1,350 bp

E Value
0E0

BLAST Score
1,210.7 bits

Similarity

92.5%

Coverage

91.14%

Alignment (schematic)

SEQ ID NO 1

91.14% cov
XM_002757998

62.96% cov

Alignment Length
853 bp

CIGAR string
41H11MN6MN5MDMI28MN5MN38MN6MN12MN3MN14M2N21MN4MN7MN29MN5MN4MN6MN12MNMN32MNMN2MN13MN20MN17MNMN39MDMI5MNMN6MN2MN3MN2MN3MNMD3MI7MN11MN18MN14MN2MN5MN25MI3MI2M2I3M2I48MN16MN5MN21MN28MN6MN14MN4MN8MN14MN20MN11MN32MN102M41H mismatches: 52 - insertions: 9 - deletions: 3
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291387151
XM_002710057

Hit length
2,343 bp

E Value
0E0

BLAST Score
935.5 bits

Similarity

87.5%

Coverage

88.34%

Alignment (schematic)

SEQ ID NO 1

88.34% cov
XM_002710057

34.66% cov

Alignment Length
824 bp

CIGAR string
67H7MN26MN2MN2MN9MN10MN2MN6MNMNMN3MDMD4M2I7MN12MN6MN2MN10MN2MN2M2N4M2N2MN13MN20MN7MN2MN13MN2MN3MIMD15MDM2D2M3D2MN3MNMN5MN8MN3MN4MN2MN23MN6MNMN39MN8MNMN2MN4MN3MN5MN3MD2MI3M2N7MI3MD3M2NMN3MN5MN5MN3MN2MN7M2NM2N10MIMDMN35MN9MN13MN5MN2MN3MN7MN14MN11MN34MN10MNMN11M2N4MN23MN32MN2MN2MN20MN5MN20MN29MN11MN23MN15M41H mismatches: 85 - insertions: 6 - deletions: 12
Bos taurus
Bos taurus
Public DB hit
GI:297480567
XM_002691470
1 of 4 hits reported for Bos taurus.

Hit length
1,353 bp

E Value
0E0

BLAST Score
883.8 bits

Similarity

85.66%

Coverage

91.68%

Alignment (schematic)

SEQ ID NO 1

91.68% cov
XM_002691470

62.53% cov

Alignment Length
858 bp

CIGAR string
36H8MN6M2DMDM3N3MN26M2N6M2D6M2I2MN5MN3MN4MN2MN2MN2MN3M2N3MNMNMDMNMIN11MN12MN6MDMNMI10MN2MN9MN2M2N17MN4MN3MN5M2N2M2N3MNMD2MNMI4MN11MI2MD11MNMN2MN6MN2MN3MNMN5MN5MN6MN4MN2MN5MN17MN6MNMN5MN9MN7MN17MN4MD2MI2N3MN3MN6MIN3MD2MN5MD2NMNMI5MNM2N2MN5MN5MN5MN3MN2MN17MN5MN4MN56MN11MN23MN26MN14MN15MNMN11M2N4MN8MN14MN20MN11MN2MN2MN8MN11MN5MN14MN35MN11MN23MN15M41H mismatches: 102 - insertions: 9 - deletions: 12
Sus scrofa
Sus scrofa
Public DB hit
GI:335285833
XM_003354910

Hit length
1,738 bp

E Value
0E0

BLAST Score
821 bits

Similarity

84.32%

Coverage

91.68%

Alignment (schematic)

SEQ ID NO 1

91.68% cov
XM_003354910

48.85% cov

Alignment Length
861 bp

CIGAR string
61H5MN2MN19MN11MN5MN3MN5MNMN2MN2MN2MN2MN4MN3MNM2N2MINMD11MN6MN4MN7MN2MN10MDMIMN2MN6MN2MN2MN13MN10MN5M2N2MI5MDMD2MNMI4MN12MIMD13M2DMINMI7M2I4M2DMN2MNMDMI8MN3MN4MN17MN8MN6MNMN2MN11MN15MN7MNMI2MD4M2NMN7MN3MN5MN3MN3MN2MN2MN3M2NMNM2N2MN5MN11MN3MN2MN7M2N5MD3MI5MNMN2MN4MN8MN3MNMN21M2N13MN11M2N22MN8MN11MN36MNMN2MN2MN2MN2M2N4MN8MN8MN5MN17MN2MN5MN5MN2MN2MN8MN11MN5MN50MN26MN8MN16M2NMN5MN14M16H mismatches: 111 - insertions: 12 - deletions: 12

Occurrence

10 times in PatSeqDB

in 2 simple families
(2 referenced in claims)
in 10 documents

Tools

SEQ ID NO

Length

294

Sequence Type

peptide

Locations

Detailed Description, Summary

Declared organism

Not specified

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:119621216
EAX00811
1 of 4 hits reported for Homo sapiens.

Hit length
400 aa

E Value
4.41E-160

BLAST Score
568.9 bits

Similarity

100%

Coverage

95.58%

Alignment (schematic)

SEQ ID NO 2

95.58% cov
EAX00811

70.25% cov

Alignment Length
281 aa

CIGAR string
13H281M mismatches: 0 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332812708
XP_003308955

Hit length
471 aa

E Value
8.9E-157

BLAST Score
557.8 bits

Similarity

98.93%

Coverage

95.58%

Alignment (schematic)

SEQ ID NO 2

95.58% cov
XP_003308955

59.66% cov

Alignment Length
281 aa
Pongo abelii
Pongo abelii
Public DB hit
GI:297668103
XP_002812295

Hit length
447 aa

E Value
2E-125

BLAST Score
453.8 bits

Similarity

98.22%

Coverage

95.58%

Alignment (schematic)

SEQ ID NO 2

95.58% cov
XP_002812295

62.86% cov

Alignment Length
281 aa
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332253825
XP_003276033

Hit length
450 aa

E Value
3.01E-125

BLAST Score
453 bits

Similarity

98.58%

Coverage

95.58%

Alignment (schematic)

SEQ ID NO 2

95.58% cov
XP_003276033

62.44% cov

Alignment Length
281 aa
Sus scrofa
Sus scrofa
Public DB hit
GI:335285834
XP_003354958

Hit length
449 aa

E Value
4.99E-113

BLAST Score
412.5 bits

Similarity

87.19%

Coverage

95.58%

Alignment (schematic)

SEQ ID NO 2

95.58% cov
XP_003354958

62.36% cov

Alignment Length
281 aa
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296224400
XP_002758044

Hit length
449 aa

E Value
7.44E-113

BLAST Score
412.1 bits

Similarity

92.91%

Coverage

95.24%

Alignment (schematic)

SEQ ID NO 2

95.24% cov
XP_002758044

62.81% cov

Alignment Length
282 aa
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:291387152
XP_002710103

Hit length
780 aa

E Value
4.26E-112

BLAST Score
409.5 bits

Similarity

91.07%

Coverage

94.9%

Alignment (schematic)

SEQ ID NO 2

94.9% cov
XP_002710103

35.64% cov

Alignment Length
280 aa
Macaca mulatta
Macaca mulatta
Public DB hit
GI:109102146
XP_001096970

Hit length
447 aa

E Value
8.87E-111

BLAST Score
405.2 bits

Similarity

96.44%

Coverage

95.58%

Alignment (schematic)

SEQ ID NO 2

95.58% cov
XP_001096970

62.86% cov

Alignment Length
281 aa
Bos taurus
Bos taurus
Public DB hit
GI:329663454
NP_001193030
1 of 2 hits reported for Bos taurus.

Hit length
450 aa

E Value
3.67E-105

BLAST Score
386.3 bits

Similarity

87.46%

Coverage

97.62%

Alignment (schematic)

SEQ ID NO 2

97.62% cov
NP_001193030

63.56% cov

Alignment Length
287 aa
Chlorocebus aethiops
Chlorocebus aethiops
Public DB hit
GI:50400625
Q9BDW8

Hit length
447 aa

E Value
1.61E-104

BLAST Score
384.4 bits

Similarity

96.8%

Coverage

95.58%

Alignment (schematic)

SEQ ID NO 2

95.58% cov
Q9BDW8

62.86% cov

Alignment Length
281 aa
Macaca fascicularis
Macaca fascicularis
Public DB hit
GI:13489043
AAK27794

Hit length
294 aa

E Value
6.64E-104

BLAST Score
382.1 bits

Similarity

96.8%

Coverage

95.58%

Alignment (schematic)

SEQ ID NO 2

95.58% cov
AAK27794

95.58% cov

Alignment Length
281 aa

Occurrence

13 times in PatSeqDB

in 2 simple families
(2 referenced in claims)
in 10 documents

Tools

SEQ ID NO

Length

1,207

Sequence Type

nucleotide

Locations

Detailed Description, Drawings, Summary

Declared organism

Not specified

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:5123452
NM_000557
1 of 6 hits reported for Homo sapiens.

Hit length
2,383 bp

E Value
0E0

BLAST Score
2,224.5 bits

Similarity

99.92%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
NM_000557

50.65% cov

Alignment Length
1,207 bp

CIGAR string
417MN789M mismatches: 1 - insertions: 0 - deletions: 0
synthetic construct
synthetic construct
Public DB hit
GI:307686238
AB590895
1 of 3 hits reported for synthetic construct.

Hit length
1,520 bp

E Value
0E0

BLAST Score
2,218.9 bits

Similarity

99.92%

Coverage

99.75%

Alignment (schematic)

SEQ ID NO 3

99.75% cov
AB590895

79.21% cov

Alignment Length
1,204 bp

CIGAR string
417MN786M3H mismatches: 1 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332858211
XM_530287

Hit length
2,593 bp

E Value
0E0

BLAST Score
2,202.3 bits

Similarity

99.59%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
XM_530287

46.55% cov

Alignment Length
1,207 bp

CIGAR string
49MN367MN108MN131MN382MN165M mismatches: 5 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297706977
XM_002830249

Hit length
2,597 bp

E Value
0E0

BLAST Score
2,163.5 bits

Similarity

99.01%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
XM_002830249

46.48% cov

Alignment Length
1,207 bp

CIGAR string
6MN14MN170MN224MN2MN37MN51MN15MN115MN15MN2MN352MN192M mismatches: 12 - insertions: 0 - deletions: 0
Papio anubis
Papio anubis
Public DB hit
GI:281182742
NM_001169009

Hit length
1,500 bp

E Value
0E0

BLAST Score
2,124.8 bits

Similarity

98.43%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
NM_001169009

80.47% cov

Alignment Length
1,207 bp

CIGAR string
6MN83MN74MN20MN5MN224MN17MN18MN71MN131MN7MN26MN2MN86MN45MN67MN110MN26MN20MN150M mismatches: 19 - insertions: 0 - deletions: 0
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297259935
XM_001099806

Hit length
2,381 bp

E Value
0E0

BLAST Score
2,108.1 bits

Similarity

98.18%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
XM_001099806

50.69% cov

Alignment Length
1,207 bp

CIGAR string
6MN83MN7MN61MN4MN20MN5MN224MN17MN18MN12MN58MN131MN7MN26MN89MN20MN24MN67MN110MN26MN20MN150M mismatches: 22 - insertions: 0 - deletions: 0
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296199734
XM_002747244

Hit length
2,376 bp

E Value
0E0

BLAST Score
1,991.8 bits

Similarity

96.51%

Coverage

99.75%

Alignment (schematic)

SEQ ID NO 3

99.75% cov
XM_002747244

50.67% cov

Alignment Length
1,205 bp

CIGAR string
3H24MN6MN22MN32MN6MN10MN47MN3MN4MN8MN8MN2MN5MN6MN63MN153MN29MN38MN38M2N19MN8MN5MN96MN31MN2MN92MN8MN8MN5MN77MN23MN2MN62MN8MN20MDMI25MN5MN11MN20MN17MN114M mismatches: 40 - insertions: 1 - deletions: 1
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:284005390
NM_001171487

Hit length
1,503 bp

E Value
0E0

BLAST Score
1,888.4 bits

Similarity

94.95%

Coverage

99.83%

Alignment (schematic)

SEQ ID NO 3

99.83% cov
NM_001171487

80.17% cov

Alignment Length
1,208 bp

CIGAR string
2H4MN32MN2MN6MN2MN4MN2MN29MN2MN14MN56MN14MN5MN5MN149MN2MN50MN14MN5MN16MN6MN5MN10MN9MI2MD42MN11M2N37MN62MN30MN28MN2MN2MDMNMI14MN8MN8MN5MN38MN11MN8MN23MN11MN2MN11MI3MD38MN5MN23MN53MN5MN8MN20MN26MN5MN32MN11MN26MN77MN15M mismatches: 55 - insertions: 3 - deletions: 3
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332249056
XM_003273629

Hit length
1,643 bp

E Value
0E0

BLAST Score
1,820.1 bits

Similarity

98.64%

Coverage

85.09%

Alignment (schematic)

SEQ ID NO 3

85.09% cov
XM_003273629

62.51% cov

Alignment Length
1,027 bp

CIGAR string
6MN83MN74MN19MN6MN32MN191MN108MN19MN111MN34MN119MN185MN20MN6M180H mismatches: 14 - insertions: 0 - deletions: 0
Bos taurus
Bos taurus
Public DB hit
GI:300795907
NM_001192273
1 of 2 hits reported for Bos taurus.

Hit length
1,500 bp

E Value
0E0

BLAST Score
1,805.3 bits

Similarity

93.71%

Coverage

99.83%

Alignment (schematic)

SEQ ID NO 3

99.83% cov
NM_001192273

80.33% cov

Alignment Length
1,208 bp

CIGAR string
2H4MN32MN8MI2M3N2MDMN5MN23MN2MN2MN9MN4MN5MN11MDMI28MN3MN4MN2MN17MN5MN11MN87MN54MN54MN2MN11MN22MN3M2N12MN9MI2MD30MN23M2N16MN20MN53MN12MN26MN5MN22MN29MN47MN8MN11MN8MN41MN11MN8MN14MN2MN10M2N5MN17MN32MN8MN5MN5MN32MN8MN26MN2MN2MN44MN21MN16MN5MN5MN5MN14MN32MN15M mismatches: 70 - insertions: 3 - deletions: 3

Occurrence

10 times in PatSeqDB

in 2 simple families
(2 referenced in claims)
in 10 documents

Tools

SEQ ID NO

Length

120

Sequence Type

peptide

Locations

Detailed Description, Summary

Declared organism

Not specified

Determined organism

Meleagris gallopavo
Meleagris gallopavo
Public DB hit
GI:326931656
XP_003211943

Hit length
500 aa

E Value
1.09E-68

BLAST Score
263.5 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_003211943

24% cov

Alignment Length
120 aa

CIGAR string
45MN74M mismatches: 1 - insertions: 0 - deletions: 0
Taeniopygia guttata
Taeniopygia guttata
Public DB hit
GI:224077422
XP_002186862

Hit length
500 aa

E Value
2.41E-68

BLAST Score
262.3 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_002186862

24% cov

Alignment Length
120 aa

CIGAR string
11MN33MN74M mismatches: 2 - insertions: 0 - deletions: 0
Gallus gallus
Gallus gallus
Public DB hit
GI:45383482
NP_989669

Hit length
500 aa

E Value
6.29E-68

BLAST Score
260.8 bits

Similarity

99.17%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
NP_989669

24% cov

Alignment Length
120 aa

CIGAR string
16MN28MN74M mismatches: 2 - insertions: 0 - deletions: 0
Callicebus moloch
Callicebus moloch
Public DB hit
GI:169731512
ACA64884

Hit length
501 aa

E Value
7.75E-68

BLAST Score
260.4 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
ACA64884

23.95% cov

Alignment Length
120 aa
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296199735
XP_002747290
1 of 2 hits reported for Callithrix jacchus.

Hit length
501 aa

E Value
7.94E-68

BLAST Score
260.4 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_002747290

23.95% cov

Alignment Length
120 aa
Otolemur garnettii
Otolemur garnettii
Public DB hit
GI:197215640
ACH53032

Hit length
498 aa

E Value
8.01E-68

BLAST Score
260.4 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
ACH53032

24.1% cov

Alignment Length
120 aa
Pongo abelii
Pongo abelii
Public DB hit
GI:297706978
XP_002830295

Hit length
501 aa

E Value
8.08E-68

BLAST Score
260.4 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_002830295

23.95% cov

Alignment Length
120 aa
Homo sapiens
Homo sapiens
Public DB hit
GI:119596614
EAW76208
1 of 3 hits reported for Homo sapiens.

Hit length
501 aa

E Value
8.35E-68

BLAST Score
260.4 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
EAW76208

23.95% cov

Alignment Length
120 aa
Pan troglodytes
Pan troglodytes
Public DB hit
GI:114681692
XP_530287
1 of 2 hits reported for Pan troglodytes.

Hit length
501 aa

E Value
8.78E-68

BLAST Score
260.4 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_530287

23.95% cov

Alignment Length
120 aa
Oryctolagus cuniculus
Oryctolagus cuniculus
Public DB hit
GI:284005391
NP_001164958

Hit length
500 aa

E Value
9.79E-68

BLAST Score
260.4 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
NP_001164958

24% cov

Alignment Length
120 aa
Macaca mulatta
Macaca mulatta
Public DB hit
GI:109092216
XP_001099806

Hit length
499 aa

E Value
1.05E-67

BLAST Score
260 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_001099806

24.05% cov

Alignment Length
120 aa
Papio anubis
Papio anubis
Public DB hit
GI:281182743
NP_001162480

Hit length
499 aa

E Value
1.11E-67

BLAST Score
260 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
NP_001162480

24.05% cov

Alignment Length
120 aa
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:109471161
XP_001066344

Hit length
495 aa

E Value
1.77E-67

BLAST Score
259.2 bits

Similarity

99.17%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
XP_001066344

24.24% cov

Alignment Length
120 aa

Occurrence

83 times in PatSeqDB

in 14 extended families
(7 referenced in claims)
in 16 simple families
(9 referenced in claims)
in 80 documents

Tools

SEQ ID NO

Length

128

Sequence Type

nucleotide

Locations

Detailed Description, Summary

Declared organism

Not specified

Determined organism

Pan troglodytes
Pan troglodytes
Public DB hit
GI:332812707
XM_003308907
1 of 2 hits reported for Pan troglodytes.

Hit length
2,000 bp

E Value
7.82E-37

BLAST Score
161.8 bits

Similarity

95.96%

Coverage

77.34%

Alignment (schematic)

SEQ ID NO 5

77.34% cov
XM_003308907

4.95% cov

Alignment Length
99 bp

CIGAR string
5H4MNMN2MN8MN80M24H mismatches: 4 - insertions: 0 - deletions: 0
Homo sapiens
Homo sapiens
Public DB hit
GI:61835231
NM_182828
1 of 7 hits reported for Homo sapiens.

Hit length
1,994 bp

E Value
7.82E-37

BLAST Score
161.8 bits

Similarity

95.96%

Coverage

77.34%

Alignment (schematic)

SEQ ID NO 5

77.34% cov
NM_182828

4.96% cov

Alignment Length
99 bp

CIGAR string
5H4MNMN2MN8MN80M24H mismatches: 4 - insertions: 0 - deletions: 0
synthetic construct
synthetic construct
Public DB hit
GI:182887860
BC160118

Hit length
1,414 bp

E Value
7.82E-37

BLAST Score
161.8 bits

Similarity

95.96%

Coverage

77.34%

Alignment (schematic)

SEQ ID NO 5

77.34% cov
BC160118

7% cov

Alignment Length
99 bp

CIGAR string
5H4MNMN2MN8MN80M24H mismatches: 4 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297668102
XM_002812249

Hit length
1,995 bp

E Value
3.64E-35

BLAST Score
156.2 bits

Similarity

94.12%

Coverage

79.69%

Alignment (schematic)

SEQ ID NO 5

79.69% cov
XM_002812249

5.11% cov

Alignment Length
102 bp

CIGAR string
5H4MNMN2MN8MN14MN36MN31M21H mismatches: 6 - insertions: 0 - deletions: 0
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332253824
XM_003275985

Hit length
2,006 bp

E Value
1.69E-33

BLAST Score
150.7 bits

Similarity

93.14%

Coverage

79.69%

Alignment (schematic)

SEQ ID NO 5

79.69% cov
XM_003275985

5.08% cov

Alignment Length
102 bp

CIGAR string
5H4MNMN2MN8MN14MN26MN9MN31M21H mismatches: 7 - insertions: 0 - deletions: 0
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296224399
XM_002757998

Hit length
1,350 bp

E Value
1.7E-28

BLAST Score
134.1 bits

Similarity

90.2%

Coverage

79.69%

Alignment (schematic)

SEQ ID NO 5

79.69% cov
XM_002757998

7.56% cov

Alignment Length
102 bp

CIGAR string
5H4MNMN2MN8M2N28MN6MN14MN4MN8MN17M21H mismatches: 10 - insertions: 0 - deletions: 0
Monodelphis domestica
Monodelphis domestica
Public DB hit
GI:126345276
XM_001370621
1 of 2 hits reported for Monodelphis domestica.

Hit length
1,386 bp

E Value
7.93E-27

BLAST Score
128.5 bits

Similarity

89.22%

Coverage

79.69%

Alignment (schematic)

SEQ ID NO 5

79.69% cov
XM_001370621

7.36% cov

Alignment Length
102 bp

CIGAR string
5H4MNMN2MN8MN5MN30MNMN11M2N4MN8MN17M21H mismatches: 11 - insertions: 0 - deletions: 0
Canis lupus familiaris
Canis lupus familiaris
Public DB hit
GI:73980594
XM_540103
1 of 2 hits reported for Canis lupus familiaris.

Hit length
678 bp

E Value
7.93E-27

BLAST Score
128.5 bits

Similarity

89.22%

Coverage

79.69%

Alignment (schematic)

SEQ ID NO 5

79.69% cov
XM_540103

15.04% cov

Alignment Length
102 bp

CIGAR string
5H4MNMN2MN8MN36MNMN11M2N4MN8MN8MN8M21H mismatches: 11 - insertions: 0 - deletions: 0
Sus scrofa
Sus scrofa
Public DB hit
GI:335285833
XM_003354910

Hit length
1,738 bp

E Value
1.72E-23

BLAST Score
117.5 bits

Similarity

87.25%

Coverage

79.69%

Alignment (schematic)

SEQ ID NO 5

79.69% cov
XM_003354910

5.87% cov

Alignment Length
102 bp

CIGAR string
5H4MNMN2MN45MNMN2MN2MN2MN2M2N4MN8MN8MN8M21H mismatches: 13 - insertions: 0 - deletions: 0

Occurrence

10 times in PatSeqDB

in 2 simple families
in 10 documents

Tools

SEQ ID NO

Length

Sequence Type

peptide

Locations

Detailed Description, Summary

Declared organism

Not specified

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:40786371
BAD07014
1 of 4 hits reported for Homo sapiens.

Hit length
453 aa

E Value
1.52E-8

BLAST Score
63.5 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
BAD07014

5.52% cov

Alignment Length
25 aa

CIGAR string
25M mismatches: 0 - insertions: 0 - deletions: 0
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332253825
XP_003276033

Hit length
450 aa

E Value
1.65E-8

BLAST Score
63.5 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_003276033

5.56% cov

Alignment Length
25 aa

CIGAR string
25M mismatches: 0 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297668103
XP_002812295

Hit length
447 aa

E Value
1.88E-8

BLAST Score
63.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_002812295

5.59% cov

Alignment Length
25 aa
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332812708
XP_003308955

Hit length
471 aa

E Value
3.55E-8

BLAST Score
62.4 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_003308955

5.31% cov

Alignment Length
25 aa
Petromyzon marinus
Petromyzon marinus
Public DB hit
GI:308513114
ADO33110

Hit length
518 aa

E Value
6.11E-8

BLAST Score
61.6 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
ADO33110

4.83% cov

Alignment Length
25 aa
Taeniopygia guttata
Taeniopygia guttata
Public DB hit
GI:224077422
XP_002186862

Hit length
500 aa

E Value
6.21E-8

BLAST Score
61.6 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_002186862

5% cov

Alignment Length
25 aa
Gallus gallus
Gallus gallus
Public DB hit
GI:45383482
NP_989669

Hit length
500 aa

E Value
6.27E-8

BLAST Score
61.6 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
NP_989669

5% cov

Alignment Length
25 aa
Meleagris gallopavo
Meleagris gallopavo
Public DB hit
GI:326931656
XP_003211943

Hit length
500 aa

E Value
6.59E-8

BLAST Score
61.6 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_003211943

5% cov

Alignment Length
25 aa
Danio rerio
Danio rerio
Public DB hit
GI:18858749
NP_571062
1 of 3 hits reported for Danio rerio.

Hit length
412 aa

E Value
8.19E-8

BLAST Score
61.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
NP_571062

6.07% cov

Alignment Length
25 aa
Anolis carolinensis
Anolis carolinensis
Public DB hit
GI:327271487
XP_003220519

Hit length
501 aa

E Value
1.15E-7

BLAST Score
60.8 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
XP_003220519

4.99% cov

Alignment Length
25 aa
Xenopus laevis
Xenopus laevis
Public DB hit
GI:147903589
NP_001086466

Hit length
494 aa

E Value
2.4E-7

BLAST Score
59.7 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
NP_001086466

5.06% cov

Alignment Length
25 aa

Occurrence

13 times in PatSeqDB

in 2 simple families
in 10 documents

Tools

SEQ ID NO

Length

128

Sequence Type

nucleotide

Locations

Detailed Description, Summary

Declared organism

Not specified

Determined organism

Homo sapiens
Homo sapiens
Public DB hit
GI:212549732
NG_008981
1 of 8 hits reported for Homo sapiens.

Hit length
25,463 bp

E Value
7.82E-37

BLAST Score
161.8 bits

Similarity

94.29%

Coverage

82.03%

Alignment (schematic)

SEQ ID NO 7

82.03% cov
NG_008981

0.41% cov

Alignment Length
105 bp

CIGAR string
5H6MN11MN5MN5MN8MN2MN62M18H mismatches: 6 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332830936
XM_003311878
1 of 2 hits reported for Pan troglodytes.

Hit length
1,689 bp

E Value
7.82E-37

BLAST Score
161.8 bits

Similarity

94.29%

Coverage

82.03%

Alignment (schematic)

SEQ ID NO 7

82.03% cov
XM_003311878

6.22% cov

Alignment Length
105 bp

CIGAR string
5H6MN11MN5MN5MN8MN2MN62M18H mismatches: 6 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297683339
XM_002819298
1 of 2 hits reported for Pongo abelii.

Hit length
1,750 bp

E Value
7.82E-37

BLAST Score
161.8 bits

Similarity

94.29%

Coverage

82.03%

Alignment (schematic)

SEQ ID NO 7

82.03% cov
XM_002819298

6% cov

Alignment Length
105 bp

CIGAR string
5H6MN11MN5MN5MN8MN2MN62M18H mismatches: 6 - insertions: 0 - deletions: 0
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297299803
XM_001090825
1 of 2 hits reported for Macaca mulatta.

Hit length
3,678 bp

E Value
7.82E-37

BLAST Score
161.8 bits

Similarity

94.29%

Coverage

82.03%

Alignment (schematic)

SEQ ID NO 7

82.03% cov
XM_001090825

2.85% cov

Alignment Length
105 bp

CIGAR string
5H6MN11MN5MN5MN8MN2MN62M18H mismatches: 6 - insertions: 0 - deletions: 0
Monodelphis domestica
Monodelphis domestica
Public DB hit
GI:126345276
XM_001370621
1 of 2 hits reported for Monodelphis domestica.

Hit length
1,386 bp

E Value
7.82E-37

BLAST Score
161.8 bits

Similarity

94.29%

Coverage

82.03%

Alignment (schematic)

SEQ ID NO 7

82.03% cov
XM_001370621

7.58% cov

Alignment Length
105 bp

CIGAR string
5H6MN8MN2MN5MN29MN2MN47M18H mismatches: 6 - insertions: 0 - deletions: 0
Canis lupus familiaris
Canis lupus familiaris
Public DB hit
GI:73980594
XM_540103
1 of 2 hits reported for Canis lupus familiaris.

Hit length
678 bp

E Value
7.82E-37

BLAST Score
161.8 bits

Similarity

94.29%

Coverage

82.03%

Alignment (schematic)

SEQ ID NO 7

82.03% cov
XM_540103

15.49% cov

Alignment Length
105 bp

CIGAR string
5H6MN8MN2MN35MN2MN35MN11M18H mismatches: 6 - insertions: 0 - deletions: 0
synthetic construct
synthetic construct
Public DB hit
GI:162319385
BC156445

Hit length
1,429 bp

E Value
7.82E-37

BLAST Score
161.8 bits

Similarity

94.29%

Coverage

82.03%

Alignment (schematic)

SEQ ID NO 7

82.03% cov
BC156445

7.35% cov

Alignment Length
105 bp

CIGAR string
5H6MN11MN5MN5MN8MN2MN62M18H mismatches: 6 - insertions: 0 - deletions: 0
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332238384
XM_003268329
1 of 2 hits reported for Nomascus leucogenys.

Hit length
1,762 bp

E Value
3.64E-35

BLAST Score
156.2 bits

Similarity

93.33%

Coverage

82.03%

Alignment (schematic)

SEQ ID NO 7

82.03% cov
XM_003268329

5.96% cov

Alignment Length
105 bp

CIGAR string
5H6MN11MN5MN2MN2MN8MN2MN62M18H mismatches: 7 - insertions: 0 - deletions: 0
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296226963
XM_002759127
1 of 2 hits reported for Callithrix jacchus.

Hit length
1,644 bp

E Value
3.64E-35

BLAST Score
156.2 bits

Similarity

93.33%

Coverage

82.03%

Alignment (schematic)

SEQ ID NO 7

82.03% cov
XM_002759127

6.39% cov

Alignment Length
105 bp

CIGAR string
5H6MN11MN2MN2MN5MN8MN2MN62M18H mismatches: 7 - insertions: 0 - deletions: 0
Bos taurus
Bos taurus
Public DB hit
GI:262118221
NM_001001140

Hit length
1,693 bp

E Value
1.69E-33

BLAST Score
150.7 bits

Similarity

92.38%

Coverage

82.03%

Alignment (schematic)

SEQ ID NO 7

82.03% cov
NM_001001140

6.2% cov

Alignment Length
105 bp

CIGAR string
5H6MN11MN5MN5MN8MN14MN2MN14MN32M18H mismatches: 8 - insertions: 0 - deletions: 0

Occurrence

10 times in PatSeqDB

in 2 simple families
in 10 documents

Tools

SEQ ID NO

Length

Sequence Type

peptide

Locations

Detailed Description, Summary

Declared organism

Not specified

Determined organism

Mus musculus
Mus musculus
Public DB hit
GI:33859664
NP_038555
1 of 4 hits reported for Mus musculus.

Hit length
453 aa

E Value
8.6E-9

BLAST Score
64.3 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
NP_038555

5.52% cov

Alignment Length
25 aa

CIGAR string
25M mismatches: 0 - insertions: 0 - deletions: 0
Bos taurus
Bos taurus
Public DB hit
GI:329663454
NP_001193030

Hit length
450 aa

E Value
1.12E-8

BLAST Score
63.9 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
NP_001193030

5.56% cov

Alignment Length
25 aa
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296224400
XP_002758044

Hit length
449 aa

E Value
1.34E-8

BLAST Score
63.9 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
XP_002758044

5.57% cov

Alignment Length
25 aa
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:281332214
NP_001163821

Hit length
449 aa

E Value
1.82E-8

BLAST Score
63.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
NP_001163821

5.57% cov

Alignment Length
25 aa
Sus scrofa
Sus scrofa
Public DB hit
GI:335285834
XP_003354958

Hit length
449 aa

E Value
1.93E-8

BLAST Score
63.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
XP_003354958

5.57% cov

Alignment Length
25 aa
Chlorocebus aethiops
Chlorocebus aethiops
Public DB hit
GI:50400625
Q9BDW8

Hit length
447 aa

E Value
2.57E-8

BLAST Score
62.8 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
Q9BDW8

5.59% cov

Alignment Length
25 aa
Macaca mulatta
Macaca mulatta
Public DB hit
GI:109102146
XP_001096970

Hit length
447 aa

E Value
2.65E-8

BLAST Score
62.8 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
XP_001096970

5.59% cov

Alignment Length
25 aa
Danio rerio
Danio rerio
Public DB hit
GI:229606120
NP_001153466
1 of 3 hits reported for Danio rerio.

Hit length
404 aa

E Value
3.16E-8

BLAST Score
62.4 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
NP_001153466

6.19% cov

Alignment Length
25 aa
Xenopus laevis
Xenopus laevis
Public DB hit
GI:148231972
NP_001079209

Hit length
413 aa

E Value
4.92E-8

BLAST Score
62 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
NP_001079209

6.05% cov

Alignment Length
25 aa
Xenopus (Silurana) tropicalis
Xenopus (Silurana) tropicalis
Public DB hit
GI:301609981
XP_002934530

Hit length
414 aa

E Value
6.87E-8

BLAST Score
61.6 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
XP_002934530

6.04% cov

Alignment Length
25 aa
Petromyzon marinus
Petromyzon marinus
Public DB hit
GI:308513114
ADO33110

Hit length
518 aa

E Value
7.04E-8

BLAST Score
61.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
ADO33110

4.83% cov

Alignment Length
25 aa

Occurrence

13 times in PatSeqDB

in 2 simple families
in 10 documents

Tools

SEQ ID NO

Length

3,585

Sequence Type

nucleotide

Locations

Summary

Declared organism

Not specified

Determined organism

Occurrence

10 times in PatSeqDB

in 2 simple families
in 10 documents

Tools

SEQ ID NO

Length

272

Sequence Type

nucleotide

Locations

Detailed Description, Summary

Declared organism

Not specified

Determined organism

Mus musculus
Mus musculus
Public DB hit
GI:33859663
NM_013527
1 of 5 hits reported for Mus musculus.

Hit length
1,399 bp

E Value
4.73E-127

BLAST Score
462.8 bits

Similarity

98.84%

Coverage

95.22%

Alignment (schematic)

SEQ ID NO 10

95.22% cov
NM_013527

18.51% cov

Alignment Length
259 bp

CIGAR string
6H8MN230MN5MN13M7H mismatches: 3 - insertions: 0 - deletions: 0
synthetic construct
synthetic construct
Public DB hit
GI:162318267
BC156128

Hit length
1,423 bp

E Value
4.73E-127

BLAST Score
462.8 bits

Similarity

98.84%

Coverage

95.22%

Alignment (schematic)

SEQ ID NO 10

95.22% cov
BC156128

18.2% cov

Alignment Length
259 bp

CIGAR string
6H8MN230MN5MN13M7H mismatches: 3 - insertions: 0 - deletions: 0
Rattus norvegicus
Rattus norvegicus
Public DB hit
GI:281332213
NM_001170350

Hit length
1,660 bp

E Value
1.34E-112

BLAST Score
414.8 bits

Similarity

95.72%

Coverage

94.49%

Alignment (schematic)

SEQ ID NO 10

94.49% cov
NM_001170350

15.48% cov

Alignment Length
257 bp

CIGAR string
6H8MN110MN26MN2MN2MN27MNMN5MN11MN11MN26MN17M9H mismatches: 11 - insertions: 0 - deletions: 0
Macaca mulatta
Macaca mulatta
Public DB hit
GI:297265516
XM_001096970

Hit length
3,147 bp

E Value
2.95E-99

BLAST Score
370.5 bits

Similarity

92.31%

Coverage

95.59%

Alignment (schematic)

SEQ ID NO 10

95.59% cov
XM_001096970

8.26% cov

Alignment Length
260 bp

CIGAR string
5H30MN5M2N10MN2MN26MN23MN11MN32MN5MN5MN11MN8M2NMN5MN11MN11MN11MN2MN31M7H mismatches: 20 - insertions: 0 - deletions: 0
Macaca fascicularis
Macaca fascicularis
Public DB hit
GI:13489042
AF254567

Hit length
2,694 bp

E Value
2.95E-99

BLAST Score
370.5 bits

Similarity

92.31%

Coverage

95.59%

Alignment (schematic)

SEQ ID NO 10

95.59% cov
AF254567

9.65% cov

Alignment Length
260 bp

CIGAR string
5H30MN5M2N10MN2MN26MN23MN11MN32MN5MN5MN11MN8M2NMN5MN11MN11MN11MN2MN31M7H mismatches: 20 - insertions: 0 - deletions: 0
Nomascus leucogenys
Nomascus leucogenys
Public DB hit
GI:332253824
XM_003275985
1 of 2 hits reported for Nomascus leucogenys.

Hit length
2,006 bp

E Value
1.37E-97

BLAST Score
364.9 bits

Similarity

91.92%

Coverage

95.59%

Alignment (schematic)

SEQ ID NO 10

95.59% cov
XM_003275985

12.96% cov

Alignment Length
260 bp

CIGAR string
5H36M2NMN5MN5MN15MN4MN5MN8MN8MN5MN44MN5MN5MN11MN9MNMN5MN11MN11MN14MN31M7H mismatches: 21 - insertions: 0 - deletions: 0
Canis lupus familiaris
Canis lupus familiaris
Public DB hit
GI:73980594
XM_540103
1 of 2 hits reported for Canis lupus familiaris.

Hit length
678 bp

E Value
1.37E-97

BLAST Score
364.9 bits

Similarity

91.92%

Coverage

95.59%

Alignment (schematic)

SEQ ID NO 10

95.59% cov
XM_540103

38.35% cov

Alignment Length
260 bp

CIGAR string
5H9MN26M2NMN11MN17MN8MN2MN20MN2MN14MN32MN5MN20M2NMN5MN11MN11MN2MN23MN19M7H mismatches: 21 - insertions: 0 - deletions: 0
Pongo abelii
Pongo abelii
Public DB hit
GI:297668102
XM_002812249
1 of 2 hits reported for Pongo abelii.

Hit length
1,995 bp

E Value
6.39E-96

BLAST Score
359.4 bits

Similarity

91.54%

Coverage

95.59%

Alignment (schematic)

SEQ ID NO 10

95.59% cov
XM_002812249

13.03% cov

Alignment Length
260 bp

CIGAR string
5H36M2NMN5MN5MN15MN10MN8MN8MN5MN44MN5MN5MN11MN8M2NMN5MN11MN11MN5MN8MN31M7H mismatches: 22 - insertions: 0 - deletions: 0
Bos taurus
Bos taurus
Public DB hit
GI:297480567
XM_002691470
1 of 4 hits reported for Bos taurus.

Hit length
1,353 bp

E Value
6.39E-96

BLAST Score
359.4 bits

Similarity

91.6%

Coverage

95.59%

Alignment (schematic)

SEQ ID NO 10

95.59% cov
XM_002691470

19.22% cov

Alignment Length
262 bp

CIGAR string
5H9MN26M2NMN29MN8MN2MN14MN5MN29MN11MD4MIMN2MN26M2NMN5MD3MI8MN11MN26MN19M7H mismatches: 18 - insertions: 2 - deletions: 2
Callithrix jacchus
Callithrix jacchus
Public DB hit
GI:296224399
XM_002757998

Hit length
1,350 bp

E Value
2.97E-94

BLAST Score
353.8 bits

Similarity

91.15%

Coverage

95.59%

Alignment (schematic)

SEQ ID NO 10

95.59% cov
XM_002757998

19.26% cov

Alignment Length
260 bp

CIGAR string
5H3MN5MN21MN4M2NMN11MN8MN17MN17MN5MN29MN14MN5MN5MN11MN8M2NMN5MN11MN11MN14MN31M7H mismatches: 23 - insertions: 0 - deletions: 0
Chlorocebus aethiops
Chlorocebus aethiops
Public DB hit
GI:13568983
AF254569

Hit length
2,169 bp

E Value
2.97E-94

BLAST Score
353.8 bits

Similarity

91.15%

Coverage

95.59%

Alignment (schematic)

SEQ ID NO 10

95.59% cov
AF254569

11.99% cov

Alignment Length
260 bp

CIGAR string
5H30MN5M2N10MN2MN26MN17MN5MN11MN11MN20MN2MN2MN5MN11MN8M2NMN5MN11MN11MN11MN2MN31M7H mismatches: 23 - insertions: 0 - deletions: 0
Pan troglodytes
Pan troglodytes
Public DB hit
GI:332812707
XM_003308907

Hit length
2,000 bp

E Value
1.38E-92

BLAST Score
348.3 bits

Similarity

90.77%

Coverage

95.59%

Alignment (schematic)

SEQ ID NO 10

95.59% cov
XM_003308907

13% cov

Alignment Length
260 bp

CIGAR string
5H36M2NMN11MN15MN10MN3MN4MN8MN5MN8MN32MN2MN5MN5MN11MN5MN2M2NMN5MN11MN11MN14MN31M7H mismatches: 24 - insertions: 0 - deletions: 0

Occurrence

10 times in PatSeqDB

in 2 simple families
in 10 documents

Tools

Filter sequences

Displaying 1 - 10 of 35 sequences

Homo sapiens

Public DB hit

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CIGAR string

Pan troglodytes

Public DB hit

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CIGAR string

synthetic construct

Public DB hit

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CIGAR string

Pongo abelii

Public DB hit

Hit length

E Value

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Alignment (schematic)

Alignment Length

CIGAR string

Nomascus leucogenys

Public DB hit

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E Value

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Alignment Length

CIGAR string

Macaca fascicularis

Public DB hit

Hit length

E Value

BLAST Score

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Alignment (schematic)

Alignment Length

CIGAR string

Macaca mulatta

Public DB hit

Hit length

E Value

BLAST Score

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Alignment (schematic)

Alignment Length

CIGAR string

Chlorocebus aethiops

Public DB hit

Hit length

E Value

BLAST Score

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Alignment (schematic)