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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
17 sequences found in this patent (in total)

Displaying 1 - 10 of 17 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
189
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
66 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
63
Type
peptide
Locations
Claims, Detailed Description

Declared organism:
Artificial

Determined organism:
  • Sulfolobus solfataricus P2

    Sulfolobus solfataricus P2

    • Public DB hit
      GI:15899284
      NP_343889
      1 of 2 hits reported for Sulfolobus solfataricus P2.
    • Hit length
      68 aa
    • E Value
      8.76E-27
    • BLAST Score
      124 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_343889
      92.65% cov
    • Alignment Length
      63 aa
    • CIGAR string
      63M mismatches: 0 - insertions: 0 - deletions: 0
  • Sulfolobus solfataricus 98/2

    Sulfolobus solfataricus 98/2

    • Public DB hit
      GI:284174192
      ZP_06388161
    • Hit length
      64 aa
    • E Value
      1.04E-26
    • BLAST Score
      124 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_06388161
      98.44% cov
    • Alignment Length
      63 aa
    • CIGAR string
      63M mismatches: 0 - insertions: 0 - deletions: 0
  • Sulfolobus acidocaldarius

    Sulfolobus acidocaldarius

    • Public DB hit
      GI:5542098
      1BF4_A
    • Hit length
      63 aa
    • E Value
      1.12E-26
    • BLAST Score
      124 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      1BF4_A
      100% cov
    • Alignment Length
      63 aa
    • CIGAR string
      63M mismatches: 0 - insertions: 0 - deletions: 0
  • Sulfolobus solfataricus

    Sulfolobus solfataricus

    • Public DB hit
      GI:3891959
      1BBX_C
      1 of 6 hits reported for Sulfolobus solfataricus.
    • Hit length
      63 aa
    • E Value
      2.29E-26
    • BLAST Score
      122.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      1BBX_C
      100% cov
    • Alignment Length
      63 aa
  • Sulfolobus islandicus L.S.2.15

    Sulfolobus islandicus L.S.2.15

    • Public DB hit
      GI:227829822
      YP_002831601
    • Hit length
      64 aa
    • E Value
      6.99E-26
    • BLAST Score
      121.3 bits
    • Similarity
      98.41%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_002831601
      98.44% cov
    • Alignment Length
      63 aa
  • Sulfolobus islandicus M.14.25

    Sulfolobus islandicus M.14.25

    • Public DB hit
      GI:227828977
      YP_002830757
    • Hit length
      64 aa
    • E Value
      1.34E-25
    • BLAST Score
      120.2 bits
    • Similarity
      96.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_002830757
      98.44% cov
    • Alignment Length
      63 aa
  • Sulfolobus islandicus L.D.8.5

    Sulfolobus islandicus L.D.8.5

    • Public DB hit
      GI:284999273
      YP_003421041
    • Hit length
      64 aa
    • E Value
      2.47E-25
    • BLAST Score
      119.4 bits
    • Similarity
      96.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_003421041
      98.44% cov
    • Alignment Length
      63 aa
  • Sulfolobus islandicus REY15A

    Sulfolobus islandicus REY15A

    • Public DB hit
      GI:323474145
      ADX84751
    • Hit length
      64 aa
    • E Value
      2.49E-25
    • BLAST Score
      119.4 bits
    • Similarity
      96.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADX84751
      98.44% cov
    • Alignment Length
      63 aa
  • Sulfolobus tokodaii str. 7

    Sulfolobus tokodaii str. 7

    • Public DB hit
      GI:15920860
      NP_376529
    • Hit length
      64 aa
    • E Value
      6.33E-22
    • BLAST Score
      108.2 bits
    • Similarity
      92.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_376529
      96.88% cov
    • Alignment Length
      63 aa
  • Acidianus hospitalis W1

    Acidianus hospitalis W1

    • Public DB hit
      GI:332797929
      YP_004459429
    • Hit length
      62 aa
    • E Value
      8.63E-20
    • BLAST Score
      100.9 bits
    • Similarity
      93.22%
    • Coverage
      93.65%
    • Alignment (schematic)

      SEQ ID NO 2
      93.65% cov
      YP_004459429
      93.55% cov
    • Alignment Length
      59 aa
  • Sulfolobus acidocaldarius DSM 639

    Sulfolobus acidocaldarius DSM 639

    • Public DB hit
      GI:70606201
      YP_255071
    • Hit length
      65 aa
    • E Value
      2.51E-19
    • BLAST Score
      99.4 bits
    • Similarity
      88.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_255071
      95.38% cov
    • Alignment Length
      63 aa
Occurrence
122 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,899
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Thermus aquaticus

    Thermus aquaticus

    • Public DB hit
      GI:507890
      D32013
      1 of 3 hits reported for Thermus aquaticus.
    • Hit length
      3,026 bp
    • E Value
      0E0
    • BLAST Score
      3,003.8 bits
    • Similarity
      100%
    • Coverage
      85.62%
    • Alignment (schematic)

      SEQ ID NO 3
      85.62% cov
      D32013
      53.73% cov
    • Alignment Length
      1,626 bp
    • CIGAR string
      225H1626M48H mismatches: 0 - insertions: 0 - deletions: 0
  • Thermus sp. YSP2A.A1

    Thermus sp. YSP2A.A1

    • Public DB hit
      GI:210077500
      FJ358542
    • Hit length
      2,499 bp
    • E Value
      0E0
    • BLAST Score
      2,915.1 bits
    • Similarity
      99.02%
    • Coverage
      85.62%
    • Alignment (schematic)

      SEQ ID NO 3
      85.62% cov
      FJ358542
      65.07% cov
    • Alignment Length
      1,626 bp
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333965676
      CP002777
    • Hit length
      1,863,201 bp
    • E Value
      0E0
    • BLAST Score
      1,785 bits
    • Similarity
      86.74%
    • Coverage
      85.15%
    • Alignment (schematic)

      SEQ ID NO 3
      85.15% cov
      CP002777
      0.09% cov
    • Alignment Length
      1,637 bp
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55771382
      AP008226
      1 of 2 hits reported for Thermus thermophilus HB8.
    • Hit length
      1,849,742 bp
    • E Value
      0E0
    • BLAST Score
      1,751.7 bits
    • Similarity
      86.39%
    • Coverage
      85.15%
    • Alignment (schematic)

      SEQ ID NO 3
      85.15% cov
      AP008226
      0.09% cov
    • Alignment Length
      1,638 bp
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:199581286
      EU708319
      1 of 2 hits reported for Thermus thermophilus.
    • Hit length
      2,505 bp
    • E Value
      0E0
    • BLAST Score
      1,746.2 bits
    • Similarity
      86.34%
    • Coverage
      85.15%
    • Alignment (schematic)

      SEQ ID NO 3
      85.15% cov
      EU708319
      64.55% cov
    • Alignment Length
      1,640 bp
  • Expression vector pLED-HB

    Expression vector pLED-HB

    • Public DB hit
      GI:6009634
      AB025788
    • Hit length
      5,260 bp
    • E Value
      0E0
    • BLAST Score
      1,746.2 bits
    • Similarity
      86.32%
    • Coverage
      85.15%
    • Alignment (schematic)

      SEQ ID NO 3
      85.15% cov
      AB025788
      30.74% cov
    • Alignment Length
      1,638 bp
  • Thermus caldophilus

    Thermus caldophilus

    • Public DB hit
      GI:1470114
      U62584
    • Hit length
      2,760 bp
    • E Value
      0E0
    • BLAST Score
      1,729.6 bits
    • Similarity
      86.14%
    • Coverage
      85.15%
    • Alignment (schematic)

      SEQ ID NO 3
      85.15% cov
      U62584
      58.59% cov
    • Alignment Length
      1,638 bp
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46197919
      AE017221
    • Hit length
      1,894,877 bp
    • E Value
      0E0
    • BLAST Score
      1,718.5 bits
    • Similarity
      86.05%
    • Coverage
      85.15%
    • Alignment (schematic)

      SEQ ID NO 3
      85.15% cov
      AE017221
      0.09% cov
    • Alignment Length
      1,641 bp
  • Thermus sp. Fiji3.A1

    Thermus sp. Fiji3.A1

    • Public DB hit
      GI:210077510
      FJ358547
    • Hit length
      2,496 bp
    • E Value
      0E0
    • BLAST Score
      1,618.8 bits
    • Similarity
      84.93%
    • Coverage
      85.15%
    • Alignment (schematic)

      SEQ ID NO 3
      85.15% cov
      FJ358547
      64.78% cov
    • Alignment Length
      1,639 bp
  • Thermus scotoductus SA-01

    Thermus scotoductus SA-01

    • Public DB hit
      GI:320149275
      CP001962
    • Hit length
      2,346,803 bp
    • E Value
      0E0
    • BLAST Score
      1,500.6 bits
    • Similarity
      83.69%
    • Coverage
      84.94%
    • Alignment (schematic)

      SEQ ID NO 3
      84.94% cov
      CP001962
      0.07% cov
    • Alignment Length
      1,637 bp
  • Thermus sp. NMX2.A1

    Thermus sp. NMX2.A1

    • Public DB hit
      GI:210077502
      FJ358543
    • Hit length
      2,493 bp
    • E Value
      0E0
    • BLAST Score
      1,500.6 bits
    • Similarity
      83.7%
    • Coverage
      84.94%
    • Alignment (schematic)

      SEQ ID NO 3
      84.94% cov
      FJ358543
      64.7% cov
    • Alignment Length
      1,638 bp
  • Thermus sp. ATCC 27737

    Thermus sp. ATCC 27737

    • Public DB hit
      GI:210077498
      FJ358541
    • Hit length
      2,493 bp
    • E Value
      0E0
    • BLAST Score
      1,489.5 bits
    • Similarity
      83.57%
    • Coverage
      84.94%
    • Alignment (schematic)

      SEQ ID NO 3
      84.94% cov
      FJ358541
      64.7% cov
    • Alignment Length
      1,637 bp
  • Thermus sp. Tp10.A2

    Thermus sp. Tp10.A2

    • Public DB hit
      GI:210077508
      FJ358546
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,256.8 bits
    • Similarity
      81.28%
    • Coverage
      84.78%
    • Alignment (schematic)

      SEQ ID NO 3
      84.78% cov
      FJ358546
      64.11% cov
    • Alignment Length
      1,651 bp
  • Thermus sp. OH.A2

    Thermus sp. OH.A2

    • Public DB hit
      GI:210077504
      FJ358544
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,251.3 bits
    • Similarity
      81.38%
    • Coverage
      83.83%
    • Alignment (schematic)

      SEQ ID NO 3
      83.83% cov
      FJ358544
      63.39% cov
    • Alignment Length
      1,633 bp
  • Thermus filiformis

    Thermus filiformis

    • Public DB hit
      GI:2739138
      AF030320
      1 of 2 hits reported for Thermus filiformis.
    • Hit length
      2,760 bp
    • E Value
      0E0
    • BLAST Score
      1,251.3 bits
    • Similarity
      81.36%
    • Coverage
      83.83%
    • Alignment (schematic)

      SEQ ID NO 3
      83.83% cov
      AF030320
      57.46% cov
    • Alignment Length
      1,631 bp
  • Thermus sp. Wai28.A1

    Thermus sp. Wai28.A1

    • Public DB hit
      GI:210077512
      FJ358548
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,229.1 bits
    • Similarity
      80.99%
    • Coverage
      84.78%
    • Alignment (schematic)

      SEQ ID NO 3
      84.78% cov
      FJ358548
      64.11% cov
    • Alignment Length
      1,652 bp
  • Thermus sp. Tok23.A1

    Thermus sp. Tok23.A1

    • Public DB hit
      GI:210077506
      FJ358545
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,229.1 bits
    • Similarity
      80.99%
    • Coverage
      84.78%
    • Alignment (schematic)

      SEQ ID NO 3
      84.78% cov
      FJ358545
      64.11% cov
    • Alignment Length
      1,652 bp
Occurrence
42 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
632
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Thermus aquaticus

    Thermus aquaticus

    • Public DB hit
      GI:6730045
      5KTQ_A
      1 of 10 hits reported for Thermus aquaticus.
    • Hit length
      543 aa
    • E Value
      0E0
    • BLAST Score
      1,081.6 bits
    • Similarity
      100%
    • Coverage
      85.92%
    • Alignment (schematic)

      SEQ ID NO 4
      85.92% cov
      5KTQ_A
      100% cov
    • Alignment Length
      543 aa
    • CIGAR string
      74H543M15H mismatches: 0 - insertions: 0 - deletions: 0
  • Methylocystis sp. ATCC 49242

    Methylocystis sp. ATCC 49242

    • Public DB hit
      GI:323140021
      ZP_08075033
    • Hit length
      833 aa
    • E Value
      0E0
    • BLAST Score
      1,080.1 bits
    • Similarity
      99.63%
    • Coverage
      86.55%
    • Alignment (schematic)

      SEQ ID NO 4
      86.55% cov
      ZP_08075033
      65.67% cov
    • Alignment Length
      547 aa
    • CIGAR string
      70HM3N543M15H mismatches: 3 - insertions: 0 - deletions: 0
  • eukaryotic synthetic construct

    eukaryotic synthetic construct

    • Public DB hit
      GI:319802967
      BAJ61823
    • Hit length
      829 aa
    • E Value
      0E0
    • BLAST Score
      1,079.3 bits
    • Similarity
      99.63%
    • Coverage
      86.55%
    • Alignment (schematic)

      SEQ ID NO 4
      86.55% cov
      BAJ61823
      65.98% cov
    • Alignment Length
      547 aa
    • CIGAR string
      70HM3N543M15H mismatches: 3 - insertions: 0 - deletions: 0
  • Thermus sp. YSP2A.A1

    Thermus sp. YSP2A.A1

    • Public DB hit
      GI:210077501
      ACJ07015
    • Hit length
      832 aa
    • E Value
      0E0
    • BLAST Score
      1,067.8 bits
    • Similarity
      98.72%
    • Coverage
      86.55%
    • Alignment (schematic)

      SEQ ID NO 4
      86.55% cov
      ACJ07015
      65.75% cov
    • Alignment Length
      547 aa
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333966710
      AEG33475
    • Hit length
      831 aa
    • E Value
      0E0
    • BLAST Score
      960.3 bits
    • Similarity
      92.49%
    • Coverage
      86.39%
    • Alignment (schematic)

      SEQ ID NO 4
      86.39% cov
      AEG33475
      65.7% cov
    • Alignment Length
      546 aa
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55981023
      YP_144320
      1 of 2 hits reported for Thermus thermophilus HB8.
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      959.9 bits
    • Similarity
      92.49%
    • Coverage
      86.39%
    • Alignment (schematic)

      SEQ ID NO 4
      86.39% cov
      YP_144320
      65.47% cov
    • Alignment Length
      546 aa
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46198998
      YP_004665
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      959.5 bits
    • Similarity
      92.49%
    • Coverage
      86.39%
    • Alignment (schematic)

      SEQ ID NO 4
      86.39% cov
      YP_004665
      65.47% cov
    • Alignment Length
      546 aa
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:199581287
      ACH89345
      1 of 3 hits reported for Thermus thermophilus.
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      957.2 bits
    • Similarity
      92.31%
    • Coverage
      86.39%
    • Alignment (schematic)

      SEQ ID NO 4
      86.39% cov
      ACH89345
      65.47% cov
    • Alignment Length
      546 aa
  • Thermus caldophilus

    Thermus caldophilus

    • Public DB hit
      GI:2506365
      P80194
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      953.4 bits
    • Similarity
      92.12%
    • Coverage
      86.39%
    • Alignment (schematic)

      SEQ ID NO 4
      86.39% cov
      P80194
      65.47% cov
    • Alignment Length
      546 aa
  • Thermus sp. Fiji3.A1

    Thermus sp. Fiji3.A1

    • Public DB hit
      GI:210077511
      ACJ07020
    • Hit length
      831 aa
    • E Value
      0E0
    • BLAST Score
      945.7 bits
    • Similarity
      93.77%
    • Coverage
      86.39%
    • Alignment (schematic)

      SEQ ID NO 4
      86.39% cov
      ACJ07020
      65.7% cov
    • Alignment Length
      546 aa
Occurrence
44 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
2,763
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Thermus aquaticus

    Thermus aquaticus

    • Public DB hit
      GI:155128
      J04639
      1 of 3 hits reported for Thermus aquaticus.
    • Hit length
      2,626 bp
    • E Value
      0E0
    • BLAST Score
      4,593.7 bits
    • Similarity
      99.96%
    • Coverage
      90.12%
    • Alignment (schematic)

      SEQ ID NO 5
      90.12% cov
      J04639
      94.82% cov
    • Alignment Length
      2,490 bp
    • CIGAR string
      225H260MN2229M48H mismatches: 1 - insertions: 0 - deletions: 0
  • Thermus sp. YSP2A.A1

    Thermus sp. YSP2A.A1

    • Public DB hit
      GI:210077500
      FJ358542
    • Hit length
      2,499 bp
    • E Value
      0E0
    • BLAST Score
      4,444.2 bits
    • Similarity
      98.88%
    • Coverage
      90.12%
    • Alignment (schematic)

      SEQ ID NO 5
      90.12% cov
      FJ358542
      99.64% cov
    • Alignment Length
      2,491 bp
    • CIGAR string
      225H174MN54MN30MN194MN41MN110MN28MI3MDN25MN3MN158MN89MN36MN21MN64MN22MN144MN97MN47MN75MN94MN125MN162MN253MNMN9MN54MN350M48H mismatches: 26 - insertions: 1 - deletions: 1
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333965676
      CP002777
    • Hit length
      1,863,201 bp
    • E Value
      0E0
    • BLAST Score
      2,719.4 bits
    • Similarity
      86.53%
    • Coverage
      89.97%
    • Alignment (schematic)

      SEQ ID NO 5
      89.97% cov
      CP002777
      0.13% cov
    • Alignment Length
      2,517 bp
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55771382
      AP008226
      1 of 2 hits reported for Thermus thermophilus HB8.
    • Hit length
      1,849,742 bp
    • E Value
      0E0
    • BLAST Score
      2,719.4 bits
    • Similarity
      86.53%
    • Coverage
      89.97%
    • Alignment (schematic)

      SEQ ID NO 5
      89.97% cov
      AP008226
      0.13% cov
    • Alignment Length
      2,516 bp
  • Expression vector pLED-HB

    Expression vector pLED-HB

    • Public DB hit
      GI:6009634
      AB025788
    • Hit length
      5,260 bp
    • E Value
      0E0
    • BLAST Score
      2,713.8 bits
    • Similarity
      86.49%
    • Coverage
      89.97%
    • Alignment (schematic)

      SEQ ID NO 5
      89.97% cov
      AB025788
      47.38% cov
    • Alignment Length
      2,516 bp
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:199581286
      EU708319
      1 of 2 hits reported for Thermus thermophilus.
    • Hit length
      2,505 bp
    • E Value
      0E0
    • BLAST Score
      2,697.2 bits
    • Similarity
      86.39%
    • Coverage
      89.97%
    • Alignment (schematic)

      SEQ ID NO 5
      89.97% cov
      EU708319
      99.48% cov
    • Alignment Length
      2,520 bp
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46197919
      AE017221
    • Hit length
      1,894,877 bp
    • E Value
      0E0
    • BLAST Score
      2,697.2 bits
    • Similarity
      86.39%
    • Coverage
      89.97%
    • Alignment (schematic)

      SEQ ID NO 5
      89.97% cov
      AE017221
      0.13% cov
    • Alignment Length
      2,520 bp
  • Thermus caldophilus

    Thermus caldophilus

    • Public DB hit
      GI:1470114
      U62584
    • Hit length
      2,760 bp
    • E Value
      0E0
    • BLAST Score
      2,669.5 bits
    • Similarity
      86.17%
    • Coverage
      89.97%
    • Alignment (schematic)

      SEQ ID NO 5
      89.97% cov
      U62584
      90.29% cov
    • Alignment Length
      2,516 bp
  • Thermus sp. Fiji3.A1

    Thermus sp. Fiji3.A1

    • Public DB hit
      GI:210077510
      FJ358547
    • Hit length
      2,496 bp
    • E Value
      0E0
    • BLAST Score
      2,529.2 bits
    • Similarity
      85.21%
    • Coverage
      89.94%
    • Alignment (schematic)

      SEQ ID NO 5
      89.94% cov
      FJ358547
      99.8% cov
    • Alignment Length
      2,522 bp
  • Thermus scotoductus SA-01

    Thermus scotoductus SA-01

    • Public DB hit
      GI:320149275
      CP001962
    • Hit length
      2,346,803 bp
    • E Value
      0E0
    • BLAST Score
      2,300.2 bits
    • Similarity
      83.6%
    • Coverage
      89.97%
    • Alignment (schematic)

      SEQ ID NO 5
      89.97% cov
      CP001962
      0.11% cov
    • Alignment Length
      2,524 bp
  • Thermus sp. NMX2.A1

    Thermus sp. NMX2.A1

    • Public DB hit
      GI:210077502
      FJ358543
    • Hit length
      2,493 bp
    • E Value
      0E0
    • BLAST Score
      2,298.4 bits
    • Similarity
      83.59%
    • Coverage
      89.94%
    • Alignment (schematic)

      SEQ ID NO 5
      89.94% cov
      FJ358543
      99.8% cov
    • Alignment Length
      2,523 bp
  • Thermus sp. ATCC 27737

    Thermus sp. ATCC 27737

    • Public DB hit
      GI:210077498
      FJ358541
    • Hit length
      2,493 bp
    • E Value
      0E0
    • BLAST Score
      2,298.4 bits
    • Similarity
      83.59%
    • Coverage
      89.94%
    • Alignment (schematic)

      SEQ ID NO 5
      89.94% cov
      FJ358541
      99.8% cov
    • Alignment Length
      2,523 bp
  • Thermus sp. Tp10.A2

    Thermus sp. Tp10.A2

    • Public DB hit
      GI:210077508
      FJ358546
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,794.2 bits
    • Similarity
      80.44%
    • Coverage
      88.56%
    • Alignment (schematic)

      SEQ ID NO 5
      88.56% cov
      FJ358546
      97.8% cov
    • Alignment Length
      2,515 bp
  • Thermus sp. Tok23.A1

    Thermus sp. Tok23.A1

    • Public DB hit
      GI:210077506
      FJ358545
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,783.1 bits
    • Similarity
      80.35%
    • Coverage
      88.56%
    • Alignment (schematic)

      SEQ ID NO 5
      88.56% cov
      FJ358545
      97.8% cov
    • Alignment Length
      2,514 bp
  • Thermus sp. OH.A2

    Thermus sp. OH.A2

    • Public DB hit
      GI:210077504
      FJ358544
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,783.1 bits
    • Similarity
      80.46%
    • Coverage
      87.91%
    • Alignment (schematic)

      SEQ ID NO 5
      87.91% cov
      FJ358544
      97.08% cov
    • Alignment Length
      2,497 bp
  • Thermus filiformis

    Thermus filiformis

    • Public DB hit
      GI:2739138
      AF030320
      1 of 2 hits reported for Thermus filiformis.
    • Hit length
      2,760 bp
    • E Value
      0E0
    • BLAST Score
      1,777.6 bits
    • Similarity
      80.42%
    • Coverage
      87.91%
    • Alignment (schematic)

      SEQ ID NO 5
      87.91% cov
      AF030320
      88.01% cov
    • Alignment Length
      2,497 bp
  • Thermus sp. Wai28.A1

    Thermus sp. Wai28.A1

    • Public DB hit
      GI:210077512
      FJ358548
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,766.5 bits
    • Similarity
      80.25%
    • Coverage
      88.56%
    • Alignment (schematic)

      SEQ ID NO 5
      88.56% cov
      FJ358548
      97.8% cov
    • Alignment Length
      2,517 bp
Occurrence
42 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
920
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Thermus aquaticus

    Thermus aquaticus

    • Public DB hit
      GI:118828
      P19821
      1 of 3 hits reported for Thermus aquaticus.
    • Hit length
      832 aa
    • E Value
      0E0
    • BLAST Score
      1,647.9 bits
    • Similarity
      100%
    • Coverage
      90.22%
    • Alignment (schematic)

      SEQ ID NO 6
      90.22% cov
      P19821
      99.76% cov
    • Alignment Length
      830 aa
    • CIGAR string
      75H830M15H mismatches: 0 - insertions: 0 - deletions: 0
  • Methylocystis sp. ATCC 49242

    Methylocystis sp. ATCC 49242

    • Public DB hit
      GI:323140021
      ZP_08075033
    • Hit length
      833 aa
    • E Value
      0E0
    • BLAST Score
      1,646.3 bits
    • Similarity
      99.88%
    • Coverage
      90.22%
    • Alignment (schematic)

      SEQ ID NO 6
      90.22% cov
      ZP_08075033
      99.64% cov
    • Alignment Length
      830 aa
    • CIGAR string
      75H134MN695M15H mismatches: 1 - insertions: 0 - deletions: 0
  • eukaryotic synthetic construct

    eukaryotic synthetic construct

    • Public DB hit
      GI:319802967
      BAJ61823
    • Hit length
      829 aa
    • E Value
      0E0
    • BLAST Score
      1,646.3 bits
    • Similarity
      100%
    • Coverage
      90.11%
    • Alignment (schematic)

      SEQ ID NO 6
      90.11% cov
      BAJ61823
      100% cov
    • Alignment Length
      829 aa
  • Thermus sp. YSP2A.A1

    Thermus sp. YSP2A.A1

    • Public DB hit
      GI:210077501
      ACJ07015
    • Hit length
      832 aa
    • E Value
      0E0
    • BLAST Score
      1,629.8 bits
    • Similarity
      99.16%
    • Coverage
      90.22%
    • Alignment (schematic)

      SEQ ID NO 6
      90.22% cov
      ACJ07015
      99.76% cov
    • Alignment Length
      830 aa
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55981023
      YP_144320
      1 of 2 hits reported for Thermus thermophilus HB8.
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      1,446 bits
    • Similarity
      92.54%
    • Coverage
      90.11%
    • Alignment (schematic)

      SEQ ID NO 6
      90.11% cov
      YP_144320
      99.64% cov
    • Alignment Length
      831 aa
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333966710
      AEG33475
    • Hit length
      831 aa
    • E Value
      0E0
    • BLAST Score
      1,445.3 bits
    • Similarity
      92.53%
    • Coverage
      90%
    • Alignment (schematic)

      SEQ ID NO 6
      90% cov
      AEG33475
      99.88% cov
    • Alignment Length
      830 aa
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:1097211
      2113329A
      1 of 3 hits reported for Thermus thermophilus.
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      1,442.6 bits
    • Similarity
      92.42%
    • Coverage
      90.11%
    • Alignment (schematic)

      SEQ ID NO 6
      90.11% cov
      2113329A
      99.64% cov
    • Alignment Length
      831 aa
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46198998
      YP_004665
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      1,441.8 bits
    • Similarity
      92.42%
    • Coverage
      90.11%
    • Alignment (schematic)

      SEQ ID NO 6
      90.11% cov
      YP_004665
      99.64% cov
    • Alignment Length
      831 aa
  • Thermus sp. Fiji3.A1

    Thermus sp. Fiji3.A1

    • Public DB hit
      GI:210077511
      ACJ07020
    • Hit length
      831 aa
    • E Value
      0E0
    • BLAST Score
      1,434.1 bits
    • Similarity
      93.73%
    • Coverage
      90%
    • Alignment (schematic)

      SEQ ID NO 6
      90% cov
      ACJ07020
      99.88% cov
    • Alignment Length
      830 aa
  • Thermus caldophilus

    Thermus caldophilus

    • Public DB hit
      GI:2506365
      P80194
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      1,430.6 bits
    • Similarity
      91.94%
    • Coverage
      90.11%
    • Alignment (schematic)

      SEQ ID NO 6
      90.11% cov
      P80194
      99.64% cov
    • Alignment Length
      831 aa
  • Thermus sp. NMX2.A1

    Thermus sp. NMX2.A1

    • Public DB hit
      GI:210077503
      ACJ07016
    • Hit length
      830 aa
    • E Value
      0E0
    • BLAST Score
      1,419.1 bits
    • Similarity
      92.64%
    • Coverage
      90%
    • Alignment (schematic)

      SEQ ID NO 6
      90% cov
      ACJ07016
      99.88% cov
    • Alignment Length
      829 aa
  • Thermus scotoductus SA-01

    Thermus scotoductus SA-01

    • Public DB hit
      GI:320450017
      YP_004202113
    • Hit length
      830 aa
    • E Value
      0E0
    • BLAST Score
      1,416.4 bits
    • Similarity
      92.52%
    • Coverage
      90%
    • Alignment (schematic)

      SEQ ID NO 6
      90% cov
      YP_004202113
      99.88% cov
    • Alignment Length
      829 aa
  • Thermus sp. ATCC 27737

    Thermus sp. ATCC 27737

    • Public DB hit
      GI:210077499
      ACJ07014
    • Hit length
      830 aa
    • E Value
      0E0
    • BLAST Score
      1,384 bits
    • Similarity
      91.07%
    • Coverage
      90%
    • Alignment (schematic)

      SEQ ID NO 6
      90% cov
      ACJ07014
      99.88% cov
    • Alignment Length
      829 aa
  • Thermus sp. Tok23.A1

    Thermus sp. Tok23.A1

    • Public DB hit
      GI:210077507
      ACJ07018
    • Hit length
      833 aa
    • E Value
      0E0
    • BLAST Score
      1,278.5 bits
    • Similarity
      87.19%
    • Coverage
      90.11%
    • Alignment (schematic)

      SEQ ID NO 6
      90.11% cov
      ACJ07018
      99.88% cov
    • Alignment Length
      835 aa
  • Thermus filiformis

    Thermus filiformis

    • Public DB hit
      GI:38146983
      AAR11876
    • Hit length
      833 aa
    • E Value
      0E0
    • BLAST Score
      1,278.1 bits
    • Similarity
      87.17%
    • Coverage
      90%
    • Alignment (schematic)

      SEQ ID NO 6
      90% cov
      AAR11876
      99.76% cov
    • Alignment Length
      834 aa
  • Thermus sp. Tp10.A2

    Thermus sp. Tp10.A2

    • Public DB hit
      GI:210077509
      ACJ07019
    • Hit length
      833 aa
    • E Value
      0E0
    • BLAST Score
      1,277.7 bits
    • Similarity
      87.17%
    • Coverage
      90%
    • Alignment (schematic)

      SEQ ID NO 6
      90% cov
      ACJ07019
      99.76% cov
    • Alignment Length
      834 aa
Occurrence
44 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
2,535
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pyrococcus furiosus DSM 3638

    Pyrococcus furiosus DSM 3638

    • Public DB hit
      GI:18980902
      AE009950
    • Hit length
      1,908,256 bp
    • E Value
      0E0
    • BLAST Score
      4,294.6 bits
    • Similarity
      100%
    • Coverage
      91.72%
    • Alignment (schematic)

      SEQ ID NO 7
      91.72% cov
      AE009950
      0.12% cov
    • Alignment Length
      2,325 bp
    • CIGAR string
      2325M210H mismatches: 0 - insertions: 0 - deletions: 0
  • Pyrococcus woesei

    Pyrococcus woesei

    • Public DB hit
      GI:2347062
      U84155
    • Hit length
      2,345 bp
    • E Value
      0E0
    • BLAST Score
      4,294.6 bits
    • Similarity
      100%
    • Coverage
      91.72%
    • Alignment (schematic)

      SEQ ID NO 7
      91.72% cov
      U84155
      99.15% cov
    • Alignment Length
      2,325 bp
    • CIGAR string
      2325M210H mismatches: 0 - insertions: 0 - deletions: 0
  • Pyrococcus furiosus

    Pyrococcus furiosus

    • Public DB hit
      GI:216917
      D12983
    • Hit length
      2,785 bp
    • E Value
      0E0
    • BLAST Score
      4,294.6 bits
    • Similarity
      100%
    • Coverage
      91.72%
    • Alignment (schematic)

      SEQ ID NO 7
      91.72% cov
      D12983
      83.48% cov
    • Alignment Length
      2,325 bp
    • CIGAR string
      2325M210H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
33 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
844
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pyrococcus furiosus DSM 3638

    Pyrococcus furiosus DSM 3638

    • Public DB hit
      GI:18976584
      NP_577941
    • Hit length
      775 aa
    • E Value
      0E0
    • BLAST Score
      1,563.1 bits
    • Similarity
      100%
    • Coverage
      91.82%
    • Alignment (schematic)

      SEQ ID NO 8
      91.82% cov
      NP_577941
      100% cov
    • Alignment Length
      775 aa
    • CIGAR string
      775M69H mismatches: 0 - insertions: 0 - deletions: 0
  • Pyrococcus furiosus

    Pyrococcus furiosus

    • Public DB hit
      GI:185177517
      2JGU_A
      1 of 2 hits reported for Pyrococcus furiosus.
    • Hit length
      775 aa
    • E Value
      0E0
    • BLAST Score
      1,547.7 bits
    • Similarity
      99.61%
    • Coverage
      91.82%
    • Alignment (schematic)

      SEQ ID NO 8
      91.82% cov
      2JGU_A
      100% cov
    • Alignment Length
      775 aa
    • CIGAR string
      95MN72MN13MN2MNMN76M2N139M3N367M69H mismatches: 10 - insertions: 0 - deletions: 0
  • Pyrococcus glycovorans

    Pyrococcus glycovorans

    • Public DB hit
      GI:7288074
      CAB81809
      1 of 2 hits reported for Pyrococcus glycovorans.
    • Hit length
      775 aa
    • E Value
      0E0
    • BLAST Score
      1,342 bits
    • Similarity
      94.06%
    • Coverage
      91.71%
    • Alignment (schematic)

      SEQ ID NO 8
      91.71% cov
      CAB81809
      99.87% cov
    • Alignment Length
      774 aa
  • Pyrococcus sp.

    Pyrococcus sp.

    • Public DB hit
      GI:436495
      AAA67131
    • Hit length
      775 aa
    • E Value
      0E0
    • BLAST Score
      1,340.5 bits
    • Similarity
      93.8%
    • Coverage
      91.71%
    • Alignment (schematic)

      SEQ ID NO 8
      91.71% cov
      AAA67131
      99.87% cov
    • Alignment Length
      774 aa
  • Thermococcus gammatolerans EJ3

    Thermococcus gammatolerans EJ3

    • Public DB hit
      GI:240103512
      YP_002959821
    • Hit length
      775 aa
    • E Value
      0E0
    • BLAST Score
      1,305 bits
    • Similarity
      90.56%
    • Coverage
      91.59%
    • Alignment (schematic)

      SEQ ID NO 8
      91.59% cov
      YP_002959821
      99.61% cov
    • Alignment Length
      773 aa
  • Pyrococcus sp. ST700

    Pyrococcus sp. ST700

    • Public DB hit
      GI:10799869
      CAC12847
    • Hit length
      759 aa
    • E Value
      0E0
    • BLAST Score
      1,302 bits
    • Similarity
      92.11%
    • Coverage
      89.93%
    • Alignment (schematic)

      SEQ ID NO 8
      89.93% cov
      CAC12847
      100% cov
    • Alignment Length
      760 aa
  • Pyrococcus sp. NA2

    Pyrococcus sp. NA2

    • Public DB hit
      GI:332158501
      YP_004423780
    • Hit length
      775 aa
    • E Value
      0E0
    • BLAST Score
      1,301.6 bits
    • Similarity
      92.27%
    • Coverage
      91.82%
    • Alignment (schematic)

      SEQ ID NO 8
      91.82% cov
      YP_004423780
      100% cov
    • Alignment Length
      776 aa
  • Pyrococcus abyssi GE5

    Pyrococcus abyssi GE5

    • Public DB hit
      GI:14521919
      NP_127396
    • Hit length
      771 aa
    • E Value
      0E0
    • BLAST Score
      1,299.6 bits
    • Similarity
      92.6%
    • Coverage
      91.23%
    • Alignment (schematic)

      SEQ ID NO 8
      91.23% cov
      NP_127396
      99.74% cov
    • Alignment Length
      770 aa
  • Thermococcus gorgonarius

    Thermococcus gorgonarius

    • Public DB hit
      GI:6015025
      P56689
      1 of 4 hits reported for Thermococcus gorgonarius.
    • Hit length
      773 aa
    • E Value
      0E0
    • BLAST Score
      1,299.3 bits
    • Similarity
      90.3%
    • Coverage
      91.59%
    • Alignment (schematic)

      SEQ ID NO 8
      91.59% cov
      P56689
      99.87% cov
    • Alignment Length
      773 aa
  • Pyrococcus abyssi

    Pyrococcus abyssi

    • Public DB hit
      GI:327507712
      P0CL76
      1 of 2 hits reported for Pyrococcus abyssi.
    • Hit length
      771 aa
    • E Value
      0E0
    • BLAST Score
      1,298.5 bits
    • Similarity
      92.34%
    • Coverage
      91.23%
    • Alignment (schematic)

      SEQ ID NO 8
      91.23% cov
      P0CL76
      99.74% cov
    • Alignment Length
      770 aa
  • Thermococcus sp. 9oN-7

    Thermococcus sp. 9oN-7

    • Public DB hit
      GI:3913540
      Q56366
      1 of 2 hits reported for Thermococcus sp. 9oN-7.
    • Hit length
      775 aa
    • E Value
      0E0
    • BLAST Score
      1,298.5 bits
    • Similarity
      90.43%
    • Coverage
      91.59%
    • Alignment (schematic)

      SEQ ID NO 8
      91.59% cov
      Q56366
      99.61% cov
    • Alignment Length
      773 aa
  • Thermococcus kodakarensis KOD1

    Thermococcus kodakarensis KOD1

    • Public DB hit
      GI:52696275
      1WNS_A
      1 of 2 hits reported for Thermococcus kodakarensis KOD1.
    • Hit length
      774 aa
    • E Value
      0E0
    • BLAST Score
      1,271.1 bits
    • Similarity
      90.43%
    • Coverage
      91.59%
    • Alignment (schematic)

      SEQ ID NO 8
      91.59% cov
      1WNS_A
      99.74% cov
    • Alignment Length
      773 aa
  • Thermococcus guaymasensis

    Thermococcus guaymasensis

    • Public DB hit
      GI:237506873
      ACQ99189
    • Hit length
      775 aa
    • E Value
      0E0
    • BLAST Score
      1,269.6 bits
    • Similarity
      89.65%
    • Coverage
      91.59%
    • Alignment (schematic)

      SEQ ID NO 8
      91.59% cov
      ACQ99189
      99.61% cov
    • Alignment Length
      773 aa
Occurrence
42 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
1,904
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Thermus aquaticus

    Thermus aquaticus

    • Public DB hit
      GI:507890
      D32013
      1 of 3 hits reported for Thermus aquaticus.
    • Hit length
      3,026 bp
    • E Value
      0E0
    • BLAST Score
      2,996.4 bits
    • Similarity
      99.94%
    • Coverage
      85.35%
    • Alignment (schematic)

      SEQ ID NO 9
      85.35% cov
      D32013
      53.73% cov
    • Alignment Length
      1,626 bp
    • CIGAR string
      231H547MI1078M48H mismatches: 0 - insertions: 1 - deletions: 0
  • Thermus sp. YSP2A.A1

    Thermus sp. YSP2A.A1

    • Public DB hit
      GI:210077500
      FJ358542
    • Hit length
      2,499 bp
    • E Value
      0E0
    • BLAST Score
      2,907.7 bits
    • Similarity
      98.95%
    • Coverage
      85.35%
    • Alignment (schematic)

      SEQ ID NO 9
      85.35% cov
      FJ358542
      65.07% cov
    • Alignment Length
      1,626 bp
    • CIGAR string
      231H56MN36MN21MN64MN22MN144MN97MN47MN52MI22MN94MN125MN162MN253MNMN9MN54MN350M48H mismatches: 16 - insertions: 1 - deletions: 0
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333965676
      CP002777
    • Hit length
      1,863,201 bp
    • E Value
      0E0
    • BLAST Score
      1,777.6 bits
    • Similarity
      86.68%
    • Coverage
      84.87%
    • Alignment (schematic)

      SEQ ID NO 9
      84.87% cov
      CP002777
      0.09% cov
    • Alignment Length
      1,637 bp
    • CIGAR string
      238H49MN2MN2MN6M3N14MN2MN3M3N2MN9MIMD5M2N8MN8M2NMN2MIN4MD4NM2N2MNMN6MN7MIMD5MN2MN8MN5MDNMI4MN3MD3MI6MN2MN2MNMN4M2N6MN35MN26MN11MN17MN2MNM3NMN6MDMI3MN2MN8MIMN3MDN5MINMD3NMNMN16MN12MN4M2N8MNMN6MIMN3MDN23MN5M2NMN17MIN3MN4MD9MNMN2MN8MI2MD11M2NMI15MN40MN3MN13MI2MD11MNMN9MNMN5MN23MN2MN12MNMN29MN3MN19MN4MN7MNMN6MNMN4MN4MN7MN35MN14MN5MN11MN8MN23MD6MI21MNMN7MN3MNMI3MDN33MNMN2MN2MN14MN15MN17M2N12M2N7MN22MN39M2NMN8MN17MN5M2NMN14MN8MN12MIMD21MN29MN2MN17MN4MN6MN8MN11M2NM2NMN11MN5MIMDMN17MDMI7MN2MN56MN2MN18MNMN2MNIMD3MN9MNMN8MN17M2N4MN8M2N3MNMN4MN4M2N5M2D4M2I11MN7M2N2M2N8MN14MN14MN14MN10M50H mismatches: 177 - insertions: 21 - deletions: 20
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55771382
      AP008226
      1 of 2 hits reported for Thermus thermophilus HB8.
    • Hit length
      1,849,742 bp
    • E Value
      0E0
    • BLAST Score
      1,744.4 bits
    • Similarity
      86.32%
    • Coverage
      84.87%
    • Alignment (schematic)

      SEQ ID NO 9
      84.87% cov
      AP008226
      0.09% cov
    • Alignment Length
      1,638 bp
    • CIGAR string
      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 mismatches: 181 - insertions: 22 - deletions: 21
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:199581286
      EU708319
      1 of 2 hits reported for Thermus thermophilus.
    • Hit length
      2,505 bp
    • E Value
      0E0
    • BLAST Score
      1,738.8 bits
    • Similarity
      86.28%
    • Coverage
      84.87%
    • Alignment (schematic)

      SEQ ID NO 9
      84.87% cov
      EU708319
      64.55% cov
    • Alignment Length
      1,640 bp
    • CIGAR string
      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 mismatches: 178 - insertions: 24 - deletions: 23
  • Expression vector pLED-HB

    Expression vector pLED-HB

    • Public DB hit
      GI:6009634
      AB025788
    • Hit length
      5,260 bp
    • E Value
      0E0
    • BLAST Score
      1,738.8 bits
    • Similarity
      86.26%
    • Coverage
      84.87%
    • Alignment (schematic)

      SEQ ID NO 9
      84.87% cov
      AB025788
      30.74% cov
    • Alignment Length
      1,638 bp
    • CIGAR string
      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 mismatches: 182 - insertions: 22 - deletions: 21
  • Thermus caldophilus

    Thermus caldophilus

    • Public DB hit
      GI:1470114
      U62584
    • Hit length
      2,760 bp
    • E Value
      0E0
    • BLAST Score
      1,722.2 bits
    • Similarity
      86.08%
    • Coverage
      84.87%
    • Alignment (schematic)

      SEQ ID NO 9
      84.87% cov
      U62584
      58.59% cov
    • Alignment Length
      1,638 bp
    • CIGAR string
      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 mismatches: 185 - insertions: 22 - deletions: 21
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46197919
      AE017221
    • Hit length
      1,894,877 bp
    • E Value
      0E0
    • BLAST Score
      1,711.1 bits
    • Similarity
      85.98%
    • Coverage
      84.87%
    • Alignment (schematic)

      SEQ ID NO 9
      84.87% cov
      AE017221
      0.09% cov
    • Alignment Length
      1,641 bp
    • CIGAR string
      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 mismatches: 181 - insertions: 25 - deletions: 24
  • Thermus sp. Fiji3.A1

    Thermus sp. Fiji3.A1

    • Public DB hit
      GI:210077510
      FJ358547
    • Hit length
      2,496 bp
    • E Value
      0E0
    • BLAST Score
      1,611.4 bits
    • Similarity
      84.87%
    • Coverage
      84.87%
    • Alignment (schematic)

      SEQ ID NO 9
      84.87% cov
      FJ358547
      64.78% cov
    • Alignment Length
      1,639 bp
    • CIGAR string
      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 mismatches: 203 - insertions: 23 - deletions: 22
  • Thermus scotoductus SA-01

    Thermus scotoductus SA-01

    • Public DB hit
      GI:320149275
      CP001962
    • Hit length
      2,346,803 bp
    • E Value
      0E0
    • BLAST Score
      1,493.2 bits
    • Similarity
      83.63%
    • Coverage
      84.66%
    • Alignment (schematic)

      SEQ ID NO 9
      84.66% cov
      CP001962
      0.07% cov
    • Alignment Length
      1,637 bp
    • CIGAR string
      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 mismatches: 219 - insertions: 25 - deletions: 24
  • Thermus sp. NMX2.A1

    Thermus sp. NMX2.A1

    • Public DB hit
      GI:210077502
      FJ358543
    • Hit length
      2,493 bp
    • E Value
      0E0
    • BLAST Score
      1,493.2 bits
    • Similarity
      83.64%
    • Coverage
      84.66%
    • Alignment (schematic)

      SEQ ID NO 9
      84.66% cov
      FJ358543
      64.7% cov
    • Alignment Length
      1,638 bp
    • CIGAR string
      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 mismatches: 217 - insertions: 26 - deletions: 25
  • Thermus sp. ATCC 27737

    Thermus sp. ATCC 27737

    • Public DB hit
      GI:210077498
      FJ358541
    • Hit length
      2,493 bp
    • E Value
      0E0
    • BLAST Score
      1,482.1 bits
    • Similarity
      83.51%
    • Coverage
      84.66%
    • Alignment (schematic)

      SEQ ID NO 9
      84.66% cov
      FJ358541
      64.7% cov
    • Alignment Length
      1,637 bp
    • CIGAR string
      242H24MI2MD9M2N7M2NMN2MN6M3N14MN2MN3MN10MNM2N3MI3MN4MD8MN5M4N2MD2M3NMI3N5MNMN13MINMD5MN2MN8MN5MD2NMI2MN14MN4MDN2MI2N7MN2MN35M4N7MN21MN5MN10MN6MN2MNM2NM2N6MDMI6MN2MN6MDMDMN2M2IN3MNM6N2MNMNMN2MN6MN14MN15MN7M2N2MDMIN5MN26MN5MN3MN4MN2MIN3MN4MD4MN10M3N3MNMNM2N13MI4M2N9MN17MN5M2N13M2N19MN2MN2MN3MN22MN32MD2MIMNM2NMN19MNM2N7MN15M2N5MN14MN2MI5M2N2MI2M2D2M2N9M2N2MN5MN29MN9MNMN2M4N8MN8MN14MN8MD3MI2MN3MNMN6M2N9MN11M4N2M2N25MN6MN4MN2MN11MN2MN11MN13MN3MN3M2N12MN9MDMI15MI5MDN4M2N6M2I2N2M2D20M2NMN11MN8MN5MN23M2N7MN11MINMD9MN11MN29MNM2N2MN3MN7MI4MD3MNM2N42MN5MIMDMN29MN26MN14MN17MN23MND3M3NMN3MIMNIMDMN2MN5MN5MN15MNMN11MNMNMN9M2NM2N4MNMN11M2N6MN5MN2MN5M2N4MN23MN14MN10M50H mismatches: 221 - insertions: 25 - deletions: 24
  • Thermus sp. Tp10.A2

    Thermus sp. Tp10.A2

    • Public DB hit
      GI:210077508
      FJ358546
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,249.5 bits
    • Similarity
      81.22%
    • Coverage
      84.51%
    • Alignment (schematic)

      SEQ ID NO 9
      84.51% cov
      FJ358546
      64.11% cov
    • Alignment Length
      1,651 bp
    • CIGAR string
      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 mismatches: 221 - insertions: 42 - deletions: 47
  • Thermus sp. OH.A2

    Thermus sp. OH.A2

    • Public DB hit
      GI:210077504
      FJ358544
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,243.9 bits
    • Similarity
      81.32%
    • Coverage
      83.56%
    • Alignment (schematic)

      SEQ ID NO 9
      83.56% cov
      FJ358544
      63.39% cov
    • Alignment Length
      1,633 bp
    • CIGAR string
      234H3MN3MN24MN20M2NMN26MN2MN14MN2MN3MDMINMN17MDM2NMN2MI2MINMDMNMN5M2D2M2I5MN8MN6MD2MI2MN5MN6MDMI4MN8MN3MD3M3N5MDM2NMI3M2NMI9MNMN2M2NMN17M2N6MI3MD27MD3MI4M2N8MN2MNMN4MN5MDMI3MN14M2D3MIMI3MNM6N5M3D3N2MD2MDMD6MN5MN4MN10MN7MIMN3MDN3MN17MDMI7MNMN8MI2N3MD3MDNMI4MNMN3MNMN3MN3MDNMI7MNM2N5MN4M2NMI10MN31MN32MD4MN2MI2MD2MINMN3M2N12MN15MD2MD2M2IM2NMN15MNMN19M3N5MN14M2N7MN12MNMN6MN2M2I4M2D3MN7MIMD10MN2MN35MN5M4N8MN8MN14MN8MD6MI3MNMN6M2N7MNMN17MNI2MND4MNIMD6MIMND6MN6MN4MN14MN2MN13M2N10MN7M2N9MN2MN9MD2MI12MNMN2I5M4NM2D7M4N21M2N10MN11MN5MN6MNMN14MNMN3M2NI2MD2MN7M2N7MN14MN29MN2MD3MI15MN3MN6MN14MN6MNM2NMN5MN5MN5MNM3N7M2NDM2N2MI13MN5MN20MN20MN6MNMN2MN5MN17M2N2M4N8MIM2NDMN5MN5MN17MN4MNI3MNMND2M2N9M3I2M2N5M3D3MN16M3NM2N2MN7MN9MN14M79H mismatches: 216 - insertions: 42 - deletions: 47
  • Thermus filiformis

    Thermus filiformis

    • Public DB hit
      GI:2739138
      AF030320
      1 of 2 hits reported for Thermus filiformis.
    • Hit length
      2,760 bp
    • E Value
      0E0
    • BLAST Score
      1,243.9 bits
    • Similarity
      81.3%
    • Coverage
      83.56%
    • Alignment (schematic)

      SEQ ID NO 9
      83.56% cov
      AF030320
      57.46% cov
    • Alignment Length
      1,631 bp
    • CIGAR string
      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 mismatches: 220 - insertions: 40 - deletions: 45
  • Thermus sp. Wai28.A1

    Thermus sp. Wai28.A1

    • Public DB hit
      GI:210077512
      FJ358548
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,221.8 bits
    • Similarity
      80.93%
    • Coverage
      84.51%
    • Alignment (schematic)

      SEQ ID NO 9
      84.51% cov
      FJ358548
      64.11% cov
    • Alignment Length
      1,652 bp
    • CIGAR string
      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 mismatches: 224 - insertions: 43 - deletions: 48
  • Thermus sp. Tok23.A1

    Thermus sp. Tok23.A1

    • Public DB hit
      GI:210077506
      FJ358545
    • Hit length
      2,502 bp
    • E Value
      0E0
    • BLAST Score
      1,221.8 bits
    • Similarity
      80.94%
    • Coverage
      84.51%
    • Alignment (schematic)

      SEQ ID NO 9
      84.51% cov
      FJ358545
      64.11% cov
    • Alignment Length
      1,653 bp
    • CIGAR string
      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 mismatches: 222 - insertions: 44 - deletions: 49
Occurrence
33 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
634
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Thermus aquaticus

    Thermus aquaticus

    • Public DB hit
      GI:6730045
      5KTQ_A
      1 of 10 hits reported for Thermus aquaticus.
    • Hit length
      543 aa
    • E Value
      0E0
    • BLAST Score
      1,080.9 bits
    • Similarity
      100%
    • Coverage
      85.65%
    • Alignment (schematic)

      SEQ ID NO 10
      85.65% cov
      5KTQ_A
      100% cov
    • Alignment Length
      543 aa
    • CIGAR string
      76H543M15H mismatches: 0 - insertions: 0 - deletions: 0
  • Methylocystis sp. ATCC 49242

    Methylocystis sp. ATCC 49242

    • Public DB hit
      GI:323140021
      ZP_08075033
    • Hit length
      833 aa
    • E Value
      0E0
    • BLAST Score
      1,079.3 bits
    • Similarity
      99.63%
    • Coverage
      86.28%
    • Alignment (schematic)

      SEQ ID NO 10
      86.28% cov
      ZP_08075033
      65.67% cov
    • Alignment Length
      547 aa
    • CIGAR string
      72HM3N543M15H mismatches: 3 - insertions: 0 - deletions: 0
  • eukaryotic synthetic construct

    eukaryotic synthetic construct

    • Public DB hit
      GI:319802967
      BAJ61823
    • Hit length
      829 aa
    • E Value
      0E0
    • BLAST Score
      1,078.5 bits
    • Similarity
      99.63%
    • Coverage
      86.28%
    • Alignment (schematic)

      SEQ ID NO 10
      86.28% cov
      BAJ61823
      65.98% cov
    • Alignment Length
      547 aa
  • Thermus sp. YSP2A.A1

    Thermus sp. YSP2A.A1

    • Public DB hit
      GI:210077501
      ACJ07015
    • Hit length
      832 aa
    • E Value
      0E0
    • BLAST Score
      1,068.1 bits
    • Similarity
      98.72%
    • Coverage
      86.28%
    • Alignment (schematic)

      SEQ ID NO 10
      86.28% cov
      ACJ07015
      65.75% cov
    • Alignment Length
      547 aa
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46198998
      YP_004665
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      959.5 bits
    • Similarity
      92.49%
    • Coverage
      86.12%
    • Alignment (schematic)

      SEQ ID NO 10
      86.12% cov
      YP_004665
      65.47% cov
    • Alignment Length
      546 aa
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333966710
      AEG33475
    • Hit length
      831 aa
    • E Value
      0E0
    • BLAST Score
      959.1 bits
    • Similarity
      92.49%
    • Coverage
      86.12%
    • Alignment (schematic)

      SEQ ID NO 10
      86.12% cov
      AEG33475
      65.7% cov
    • Alignment Length
      546 aa
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55981023
      YP_144320
      1 of 2 hits reported for Thermus thermophilus HB8.
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      958.7 bits
    • Similarity
      92.49%
    • Coverage
      86.12%
    • Alignment (schematic)

      SEQ ID NO 10
      86.12% cov
      YP_144320
      65.47% cov
    • Alignment Length
      546 aa
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:199581287
      ACH89345
      1 of 3 hits reported for Thermus thermophilus.
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      957.2 bits
    • Similarity
      92.31%
    • Coverage
      86.12%
    • Alignment (schematic)

      SEQ ID NO 10
      86.12% cov
      ACH89345
      65.47% cov
    • Alignment Length
      546 aa
  • Thermus caldophilus

    Thermus caldophilus

    • Public DB hit
      GI:2506365
      P80194
    • Hit length
      834 aa
    • E Value
      0E0
    • BLAST Score
      953.4 bits
    • Similarity
      92.12%
    • Coverage
      86.12%
    • Alignment (schematic)

      SEQ ID NO 10
      86.12% cov
      P80194
      65.47% cov
    • Alignment Length
      546 aa
  • Thermus sp. Fiji3.A1

    Thermus sp. Fiji3.A1

    • Public DB hit
      GI:210077511
      ACJ07020
    • Hit length
      831 aa
    • E Value
      0E0
    • BLAST Score
      945.3 bits
    • Similarity
      93.77%
    • Coverage
      86.12%
    • Alignment (schematic)

      SEQ ID NO 10
      86.12% cov
      ACJ07020
      65.7% cov
    • Alignment Length
      546 aa
Occurrence
42 times in PatSeqDB
Tools
PatSeq Finder

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