Loading...

Search for Biological Sequences disclosed in Patents

Discover PatSeq Finder: Search and analyse similar sequence matches in the Lens PatSeq database effortlessly using PatSeq Finder. Scan 480M+ biological sequences disclosed in patents on a privacy-assured platform and give your IP strategy the edge.

View PatSeq Dismiss
Data obtained from: DDBJ Pat NCBI GenBank EMBL-EBI Pat USPTO Fulltext
90 sequences found in this patent (in total)

Displaying 1 - 10 of 90 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:187960074
      NG_007666
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      10,309 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NG_007666
      0.19% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332835465
      XM_003312846
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      992 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003312846
      2.02% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332264654
      XR_123255
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,097 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XR_123255
      1.82% cov
    • Alignment Length
      20 bp
  • Propithecus coquereli

    Propithecus coquereli

    • Public DB hit
      GI:187609538
      EU605940
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605940
      2.63% cov
    • Alignment Length
      20 bp
  • Varecia rubra

    Varecia rubra

    • Public DB hit
      GI:187609536
      EU605939
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605939
      2.63% cov
    • Alignment Length
      20 bp
  • Varecia variegata variegata

    Varecia variegata variegata

    • Public DB hit
      GI:187609534
      EU605938
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605938
      2.63% cov
    • Alignment Length
      20 bp
  • Nycticebus coucang

    Nycticebus coucang

    • Public DB hit
      GI:187609532
      EU605937
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605937
      2.63% cov
    • Alignment Length
      20 bp
  • Eulemur macaco macaco

    Eulemur macaco macaco

    • Public DB hit
      GI:187609530
      EU605936
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605936
      2.63% cov
    • Alignment Length
      20 bp
  • Eulemur flavifrons

    Eulemur flavifrons

    • Public DB hit
      GI:187609528
      EU605935
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605935
      2.63% cov
    • Alignment Length
      20 bp
  • Eulemur mongoz

    Eulemur mongoz

    • Public DB hit
      GI:187609526
      EU605934
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605934
      2.63% cov
    • Alignment Length
      20 bp
  • Eulemur rufus

    Eulemur rufus

    • Public DB hit
      GI:187609524
      EU605933
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605933
      2.63% cov
    • Alignment Length
      20 bp
  • Eulemur albifrons

    Eulemur albifrons

    • Public DB hit
      GI:187609522
      EU605932
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605932
      2.63% cov
    • Alignment Length
      20 bp
  • Cheirogaleus medius

    Cheirogaleus medius

    • Public DB hit
      GI:187609520
      EU605931
    • Hit length
      760 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EU605931
      2.63% cov
    • Alignment Length
      20 bp
Occurrence
1578 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:142380030
      NM_029780
      1 of 14 hits reported for Mus musculus.
    • Hit length
      3,066 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_029780
      0.65% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:40254798
      NM_012639
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      2,970 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_012639
      0.67% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Moloney murine sarcoma virus

    Moloney murine sarcoma virus

    • Public DB hit
      GI:332206
      K01691
      1 of 2 hits reported for Moloney murine sarcoma virus.
    • Hit length
      1,514 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      K01691
      1.32% cov
    • Alignment Length
      20 bp
Occurrence
1461 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,608
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:1711116
      U79012
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      1,608 bp
    • E Value
      0E0
    • BLAST Score
      2,970.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      U79012
      100% cov
    • Alignment Length
      1,608 bp
    • CIGAR string
      1608M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332816103
      XM_001153669
    • Hit length
      1,856 bp
    • E Value
      0E0
    • BLAST Score
      2,918.8 bits
    • Similarity
      99.56%
    • Coverage
      99.56%
    • Alignment (schematic)

      SEQ ID NO 3
      99.56% cov
      XM_001153669
      86.26% cov
    • Alignment Length
      1,601 bp
    • CIGAR string
      7H265MN50MN30MN7MN5MN767MN323MN147M mismatches: 7 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332231709
      XM_003264989
    • Hit length
      1,856 bp
    • E Value
      0E0
    • BLAST Score
      2,846.8 bits
    • Similarity
      98.75%
    • Coverage
      99.56%
    • Alignment (schematic)

      SEQ ID NO 3
      99.56% cov
      XM_003264989
      86.26% cov
    • Alignment Length
      1,601 bp
    • CIGAR string
      7H10MN23MN200MN8MN20MN50MN30MN7MN5MN44MN65MN20MN20MN92MN173MN350MN2MN317MN11MN83MN51M mismatches: 20 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296225869
      XM_002758639
    • Hit length
      1,843 bp
    • E Value
      0E0
    • BLAST Score
      2,741.5 bits
    • Similarity
      97.57%
    • Coverage
      99.56%
    • Alignment (schematic)

      SEQ ID NO 3
      99.56% cov
      XM_002758639
      86.87% cov
    • Alignment Length
      1,602 bp
    • CIGAR string
      7H9MN24MN74MN59MN74MN20MN47MN2MN29MDMI13MN50MN40MN16MN22MN32MN2MN5MN41MN29MN77MN44MN50MN191MN14MN38MN5MN8MN59MN92MN5MN110MN65MN14MN59MN5MN83MN17MN5MN33M mismatches: 37 - insertions: 1 - deletions: 1
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136280
      NM_001032860
    • Hit length
      1,759 bp
    • E Value
      0E0
    • BLAST Score
      2,726.8 bits
    • Similarity
      98.57%
    • Coverage
      95.9%
    • Alignment (schematic)

      SEQ ID NO 3
      95.9% cov
      NM_001032860
      87.66% cov
    • Alignment Length
      1,543 bp
    • CIGAR string
      66H110MN74MN20MN39MN10MN29MDMI7MN5MN53MN47MN29MN14MN20MN197MN53MN191MN110MN50MN83MN134MN98MN147M mismatches: 20 - insertions: 1 - deletions: 1
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:15723731
      AY048695
    • Hit length
      1,765 bp
    • E Value
      0E0
    • BLAST Score
      2,710.2 bits
    • Similarity
      98.38%
    • Coverage
      95.9%
    • Alignment (schematic)

      SEQ ID NO 3
      95.9% cov
      AY048695
      87.37% cov
    • Alignment Length
      1,543 bp
    • CIGAR string
      66H110MN74MN20MN39MN10MN29MDMI7MN5MN5MN47MN47MN29MN14MN20MN197MN53MN191MN26MN83MN50MN48MN34MN134MN98MN147M mismatches: 23 - insertions: 1 - deletions: 1
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
27
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:226061859
      NG_011749
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      153,507 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NG_011749
      0.02% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332816103
      XM_001153669
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,856 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_001153669
      1.45% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332231709
      XM_003264989
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,856 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003264989
      1.45% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296225869
      XM_002758639
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,843 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002758639
      1.47% cov
    • Alignment Length
      27 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301771797
      XM_002921267
    • Hit length
      1,820 bp
    • E Value
      2.79E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      92.59%
    • Alignment (schematic)

      SEQ ID NO 4
      92.59% cov
      XM_002921267
      1.37% cov
    • Alignment Length
      25 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:115546442
      AK230961
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      1,867 bp
    • E Value
      4.35E-3
    • BLAST Score
      46.1 bits
    • Similarity
      96.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AK230961
      1.45% cov
    • Alignment Length
      27 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149728265
      XM_001492411
      1 of 2 hits reported for Equus caballus.
    • Hit length
      1,814 bp
    • E Value
      6.79E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      92.59%
    • Alignment (schematic)

      SEQ ID NO 4
      92.59% cov
      XM_001492411
      1.38% cov
    • Alignment Length
      25 bp
Occurrence
53 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:226061859
      NG_011749
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      153,507 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NG_011749
      0.01% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332816103
      XM_001153669
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,856 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001153669
      1.08% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332231709
      XM_003264989
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,856 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003264989
      1.08% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301771797
      XM_002921267
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,820 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002921267
      1.1% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296225869
      XM_002758639
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,843 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002758639
      1.09% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136280
      NM_001032860
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,759 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_001032860
      1.14% cov
    • Alignment Length
      20 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:21552436
      AY048698
      1 of 3 hits reported for Macaca fascicularis.
    • Hit length
      1,849 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AY048698
      1.08% cov
    • Alignment Length
      20 bp
Occurrence
57 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
31
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:226061859
      NG_011749
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      153,507 bp
    • E Value
      1.01E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NG_011749
      0.02% cov
    • Alignment Length
      31 bp
    • CIGAR string
      31M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332816103
      XM_001153669
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,856 bp
    • E Value
      1.01E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001153669
      1.67% cov
    • Alignment Length
      31 bp
    • CIGAR string
      31M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332231709
      XM_003264989
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,856 bp
    • E Value
      1.01E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003264989
      1.67% cov
    • Alignment Length
      31 bp
    • CIGAR string
      31M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296225869
      XM_002758639
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,843 bp
    • E Value
      1.01E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002758639
      1.68% cov
    • Alignment Length
      31 bp
  • Felis catus

    Felis catus

    • Public DB hit
      GI:163929561
      NM_001113176
      1 of 2 hits reported for Felis catus.
    • Hit length
      1,841 bp
    • E Value
      1.01E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001113176
      1.68% cov
    • Alignment Length
      31 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:103472123
      NM_001024632
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      1,830 bp
    • E Value
      1.01E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001024632
      1.69% cov
    • Alignment Length
      31 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:187960102
      NM_011146
      1 of 9 hits reported for Mus musculus.
    • Hit length
      1,769 bp
    • E Value
      1.01E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_011146
      1.75% cov
    • Alignment Length
      31 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136280
      NM_001032860
    • Hit length
      1,759 bp
    • E Value
      1.01E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001032860
      1.76% cov
    • Alignment Length
      31 bp
Occurrence
53 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
19
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:163954974
      NG_007073
    • Hit length
      10,880 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NG_007073
      0.17% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332860561
      XR_019963
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,220 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_019963
      1.56% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249238
      XM_003273723
      1 of 3 hits reported for Nomascus leucogenys.
    • Hit length
      1,433 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003273723
      1.33% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:306482640
      NM_001195426
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      1,106 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001195426
      1.72% cov
    • Alignment Length
      19 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297709813
      XR_095997
    • Hit length
      1,237 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_095997
      1.54% cov
    • Alignment Length
      19 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296235519
      XM_002762889
      1 of 14 hits reported for Callithrix jacchus.
    • Hit length
      1,146 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002762889
      1.66% cov
    • Alignment Length
      19 bp
Occurrence
2414 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:163954974
      NG_007073
    • Hit length
      10,880 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NG_007073
      0.18% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332860561
      XR_019963
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      1,220 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_019963
      1.64% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249238
      XM_003273723
      1 of 5 hits reported for Nomascus leucogenys.
    • Hit length
      1,433 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003273723
      1.4% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297709736
      XR_095984
      1 of 5 hits reported for Pongo abelii.
    • Hit length
      1,239 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_095984
      1.61% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297303688
      XR_010863
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,073 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_010863
      1.86% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296238394
      XR_091313
      1 of 8 hits reported for Callithrix jacchus.
    • Hit length
      1,051 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_091313
      1.9% cov
    • Alignment Length
      20 bp
Occurrence
2570 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:294610684
      NG_017077
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      590,310 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NG_017077
      0% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332838388
      XM_508955
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,422 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_508955
      1.41% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249238
      XM_003273723
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,433 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003273723
      1.4% cov
    • Alignment Length
      20 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297678549
      XR_093697
    • Hit length
      1,070 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XR_093697
      1.87% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297303688
      XR_010863
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      1,073 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XR_010863
      1.86% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296238891
      XR_091402
      1 of 15 hits reported for Callithrix jacchus.
    • Hit length
      888 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XR_091402
      2.25% cov
    • Alignment Length
      20 bp
Occurrence
1657 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
1,100
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2605488
      AB005520
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      1,100 bp
    • E Value
      0E0
    • BLAST Score
      2,032.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AB005520
      100% cov
    • Alignment Length
      1,100 bp
    • CIGAR string
      1100M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder

Filter Sequences

Clear

Sign in to the Lens

Forgot Password? Register New Account

Language Improvements

We have been busy updating our localisation and all existing languages.

Much of these translations have been done using machine translation with a check from a native speaker, however not all elements of the UI have been checked for each language. If you see a term that is not translated correctly or should be improved, please contact Support.

  Don't show again
Feedback