Sequences - The Lens - Free & Open Patent and Scholarly Search

Search for Biological Sequences disclosed in Patents

Discover PatSeq Finder: Search and analyse similar sequence matches in the Lens PatSeq database effortlessly using PatSeq Finder. Scan 480M+ biological sequences disclosed in patents on a privacy-assured platform and give your IP strategy the edge.

View PatSeq Dismiss

Data obtained from: USPTO Fulltext

38 sequences found in this patent (in total)

Displaying 1 - 10 of 38 sequences

SEQ ID NO

Length

Type

Locations

Organisms

Occurrence

Tools

SEQ ID NO

Length

2,233

Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism:
Influenza A

Determined organism:

Influenza A virus (A/reassortant/NYMC X-179A(California/07/2009 x NYMC X-157)(H1N1))
Influenza A virus (A/reassortant/NYMC X-179A(California/07/2009 x NYMC X-157)(H1N1))
Public DB hit
GI:292495987
CY058518

Hit length
2,233 bp

E Value
0E0

BLAST Score
4,124.7 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
CY058518

100% cov

Alignment Length
2,233 bp

CIGAR string
2233M mismatches: 0 - insertions: 0 - deletions: 0
Influenza A virus (A/reassortant/NYMC X-179(California/07/2009 x NYMC X-157)(H1N1))
Influenza A virus (A/reassortant/NYMC X-179(California/07/2009 x NYMC X-157)(H1N1))
Public DB hit
GI:292495969
CY058510

Hit length
2,233 bp

E Value
0E0

BLAST Score
4,113.6 bits

Similarity

99.91%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
CY058510

100% cov

Alignment Length
2,233 bp

CIGAR string
1690MN169MN372M mismatches: 2 - insertions: 0 - deletions: 0
Influenza A virus (A/lvPR8/34(H1N1))
Influenza A virus (A/lvPR8/34(H1N1))
Public DB hit
GI:145322850
EF190981

Hit length
2,233 bp

E Value
0E0

BLAST Score
4,113.6 bits

Similarity

99.91%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
EF190981

100% cov

Alignment Length
2,233 bp

CIGAR string
1409MN641MN181M mismatches: 2 - insertions: 0 - deletions: 0
Influenza A virus (A/England/939/69(H3N2)) x (A/PR/8/34(H1N1))
Influenza A virus (A/England/939/69(H3N2)) x (A/PR/8/34(H1N1))
Public DB hit
GI:38198583
AJ605763

Hit length
2,233 bp

E Value
0E0

BLAST Score
4,113.6 bits

Similarity

99.91%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
AJ605763

100% cov

Alignment Length
2,233 bp
Influenza A virus (A/reassortant/NYMC X-175C(Uruguay/716/2007 x Puerto Rico/8/1934)(H3N2))
Influenza A virus (A/reassortant/NYMC X-175C(Uruguay/716/2007 x Puerto Rico/8/1934)(H3N2))
Public DB hit
GI:292495951
CY058502

Hit length
2,233 bp

E Value
0E0

BLAST Score
4,108.1 bits

Similarity

99.87%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
CY058502

100% cov

Alignment Length
2,233 bp
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Public DB hit
GI:21693166
AF389117

Hit length
2,233 bp

E Value
0E0

BLAST Score
4,108.1 bits

Similarity

99.87%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
AF389117

100% cov

Alignment Length
2,233 bp
Influenza A virus (A/X-31(H3N2))
Influenza A virus (A/X-31(H3N2))
Public DB hit
GI:9049385
AB036780

Hit length
2,233 bp

E Value
0E0

BLAST Score
4,108.1 bits

Similarity

99.87%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
AB036780

100% cov

Alignment Length
2,233 bp
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Public DB hit
GI:126599259
EF467820

Hit length
2,233 bp

E Value
0E0

BLAST Score
4,102.5 bits

Similarity

99.82%

Coverage

100%

Alignment (schematic)

SEQ ID NO 1

100% cov
EF467820

100% cov

Alignment Length
2,233 bp
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Public DB hit
GI:323697394
CY084179

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084179

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Public DB hit
GI:323697375
CY084171

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084171

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Public DB hit
GI:323697356
CY084163

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084163

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Public DB hit
GI:323697318
CY084147

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084147

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Public DB hit
GI:323697299
CY084139

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084139

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Public DB hit
GI:323697280
CY084131

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084131

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Public DB hit
GI:323697261
CY084123

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084123

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Public DB hit
GI:323696944
CY084115

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084115

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Public DB hit
GI:323696925
CY084107

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084107

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Public DB hit
GI:323696428
CY084075

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084075

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Public DB hit
GI:323696390
CY084059

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084059

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Public DB hit
GI:323696137
CY084051

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084051

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-CV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV6/1934(H1N1))
Public DB hit
GI:323696118
CY084043

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084043

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Public DB hit
GI:323696099
CY084035

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084035

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-CV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV2/1934(H1N1))
Public DB hit
GI:323696080
CY084027

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084027

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-CV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV1/1934(H1N1))
Public DB hit
GI:323696061
CY084019

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,078.5 bits

Similarity

100%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084019

100% cov

Alignment Length
2,208 bp
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Public DB hit
GI:323697413
CY084187

Hit length
2,208 bp

E Value
0E0

BLAST Score
4,073 bits

Similarity

99.95%

Coverage

98.88%

Alignment (schematic)

SEQ ID NO 1

98.88% cov
CY084187

100% cov

Alignment Length
2,208 bp

Occurrence

85 times in PatSeqDB

in 15 families
(12 referenced in claims)
in 79 documents

Tools

PatSeq Finder

SEQ ID NO

Length

2,341

Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism:
Influenza A

Determined organism:

Influenza A virus (A/reassortant/NYMC X-175C(Uruguay/716/2007 x Puerto Rico/8/1934)(H3N2))
Influenza A virus (A/reassortant/NYMC X-175C(Uruguay/716/2007 x Puerto Rico/8/1934)(H3N2))
Public DB hit
GI:292495948
CY058501

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,313 bits

Similarity

99.91%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
CY058501

100% cov

Alignment Length
2,341 bp

CIGAR string
1029MN681MN629M mismatches: 2 - insertions: 0 - deletions: 0
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Public DB hit
GI:126599244
EF467819

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,313 bits

Similarity

99.91%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
EF467819

100% cov

Alignment Length
2,341 bp

CIGAR string
1203MN507MN629M mismatches: 2 - insertions: 0 - deletions: 0
Influenza A virus (A/lvPR8/34(H1N1))
Influenza A virus (A/lvPR8/34(H1N1))
Public DB hit
GI:145322848
EF190980

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,307.5 bits

Similarity

99.87%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
EF190980

100% cov

Alignment Length
2,341 bp

CIGAR string
1711MN71MN195MN361M mismatches: 3 - insertions: 0 - deletions: 0
Influenza A virus (A/X-31(H3N2))
Influenza A virus (A/X-31(H3N2))
Public DB hit
GI:9049387
AB036781

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,290.9 bits

Similarity

99.74%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
AB036781

100% cov

Alignment Length
2,341 bp
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Public DB hit
GI:21693164
AF389116

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,279.8 bits

Similarity

99.66%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
AF389116

100% cov

Alignment Length
2,341 bp
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Public DB hit
GI:323697415
CY084188

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084188

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Public DB hit
GI:323697396
CY084180

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084180

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Public DB hit
GI:323697377
CY084172

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084172

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Public DB hit
GI:323697358
CY084164

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084164

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Public DB hit
GI:323697339
CY084156

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084156

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Public DB hit
GI:323697320
CY084148

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084148

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Public DB hit
GI:323697301
CY084140

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084140

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Public DB hit
GI:323697282
CY084132

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084132

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Public DB hit
GI:323697263
CY084124

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084124

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Public DB hit
GI:323696927
CY084108

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084108

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Public DB hit
GI:323696908
CY084100

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084100

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Public DB hit
GI:323696889
CY084092

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084092

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Public DB hit
GI:323696449
CY084084

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084084

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Public DB hit
GI:323696430
CY084076

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084076

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Public DB hit
GI:323696411
CY084068

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084068

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Public DB hit
GI:323696392
CY084060

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084060

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Public DB hit
GI:323696139
CY084052

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084052

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV6/1934(H1N1))
Public DB hit
GI:323696120
CY084044

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084044

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Public DB hit
GI:323696101
CY084036

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084036

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV2/1934(H1N1))
Public DB hit
GI:323696082
CY084028

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 2

98.93% cov
CY084028

100% cov

Alignment Length
2,316 bp

Occurrence

71 times in PatSeqDB

in 13 families
(9 referenced in claims)
in 69 documents

Tools

PatSeq Finder

SEQ ID NO

Length

2,341

Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism:
Influenza A

Determined organism:

Influenza A virus (A/reassortant/NYMC X-179A(California/07/2009 x NYMC X-157)(H1N1))
Influenza A virus (A/reassortant/NYMC X-179A(California/07/2009 x NYMC X-157)(H1N1))
Public DB hit
GI:292495983
CY058516

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,313 bits

Similarity

99.91%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CY058516

100% cov

Alignment Length
2,341 bp

CIGAR string
48MN1255MN1036M mismatches: 2 - insertions: 0 - deletions: 0
Influenza A virus (A/reassortant/NYMC X-179(California/07/2009 x NYMC X-157)(H1N1))
Influenza A virus (A/reassortant/NYMC X-179(California/07/2009 x NYMC X-157)(H1N1))
Public DB hit
GI:292495965
CY058508

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,313 bits

Similarity

99.91%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CY058508

100% cov

Alignment Length
2,341 bp

CIGAR string
48MN1255MN1036M mismatches: 2 - insertions: 0 - deletions: 0
Influenza A virus (A/lvPR8/34(H1N1))
Influenza A virus (A/lvPR8/34(H1N1))
Public DB hit
GI:145322846
EF190979

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,307.5 bits

Similarity

99.87%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
EF190979

100% cov

Alignment Length
2,341 bp

CIGAR string
48MN1255MN826MN209M mismatches: 3 - insertions: 0 - deletions: 0
Influenza A virus (A/swine/Shandong/3/2005(H3N2))
Influenza A virus (A/swine/Shandong/3/2005(H3N2))
Public DB hit
GI:157421854
EU116038

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,302 bits

Similarity

99.83%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
EU116038

100% cov

Alignment Length
2,341 bp
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Public DB hit
GI:21693162
AF389115

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,302 bits

Similarity

99.83%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
AF389115

100% cov

Alignment Length
2,341 bp
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Public DB hit
GI:126599228
EF467818

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,296.4 bits

Similarity

99.79%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
EF467818

100% cov

Alignment Length
2,342 bp
Influenza A virus (A/X-31(H3N2))
Influenza A virus (A/X-31(H3N2))
Public DB hit
GI:9049389
AB036782

Hit length
2,341 bp

E Value
0E0

BLAST Score
4,290.9 bits

Similarity

99.74%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
AB036782

100% cov

Alignment Length
2,341 bp
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Public DB hit
GI:323697418
CY084189

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084189

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Public DB hit
GI:323697399
CY084181

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084181

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Public DB hit
GI:323697380
CY084173

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084173

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Public DB hit
GI:323697361
CY084165

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084165

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Public DB hit
GI:323697342
CY084157

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084157

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Public DB hit
GI:323697304
CY084141

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084141

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Public DB hit
GI:323696949
CY084117

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084117

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Public DB hit
GI:323696930
CY084109

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084109

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Public DB hit
GI:323696911
CY084101

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084101

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Public DB hit
GI:323696892
CY084093

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084093

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Public DB hit
GI:323696452
CY084085

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084085

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Public DB hit
GI:323696414
CY084069

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084069

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Public DB hit
GI:323696395
CY084061

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084061

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Public DB hit
GI:323696142
CY084053

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084053

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV6/1934(H1N1))
Public DB hit
GI:323696123
CY084045

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084045

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Public DB hit
GI:323696104
CY084037

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084037

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV2/1934(H1N1))
Public DB hit
GI:323696085
CY084029

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084029

100% cov

Alignment Length
2,316 bp
Influenza A virus (A/Puerto Rico/8-CV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV1/1934(H1N1))
Public DB hit
GI:323696066
CY084021

Hit length
2,316 bp

E Value
0E0

BLAST Score
4,278 bits

Similarity

100%

Coverage

98.93%

Alignment (schematic)

SEQ ID NO 3

98.93% cov
CY084021

100% cov

Alignment Length
2,316 bp

Occurrence

98 times in PatSeqDB

in 18 families
(13 referenced in claims)
in 92 documents

Tools

PatSeq Finder

SEQ ID NO

Length

1,565

Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism:
Influenza A

Determined organism:

Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Public DB hit
GI:126599284
EF467822
1 of 4 hits reported for Influenza A virus (A/Puerto Rico/8/1934(H1N1)).

Hit length
1,565 bp

E Value
0E0

BLAST Score
2,891.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
EF467822

100% cov

Alignment Length
1,565 bp

CIGAR string
1565M mismatches: 0 - insertions: 0 - deletions: 0
Influenza A virus (A/X-31(H3N2))
Influenza A virus (A/X-31(H3N2))
Public DB hit
GI:9049383
AB036779

Hit length
1,565 bp

E Value
0E0

BLAST Score
2,891.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
AB036779

100% cov

Alignment Length
1,565 bp

CIGAR string
1565M mismatches: 0 - insertions: 0 - deletions: 0
Influenza A virus (A/swine/Wuhan/10/2010(H1N1))
Influenza A virus (A/swine/Wuhan/10/2010(H1N1))
Public DB hit
GI:333891319
JF793556

Hit length
1,565 bp

E Value
0E0

BLAST Score
2,880 bits

Similarity

99.87%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
JF793556

100% cov

Alignment Length
1,565 bp
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Public DB hit
GI:323697408
CY084185

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084185

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Public DB hit
GI:323697389
CY084177

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084177

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Public DB hit
GI:323697370
CY084169

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084169

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Public DB hit
GI:323697351
CY084161

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084161

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Public DB hit
GI:323697332
CY084153

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084153

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Public DB hit
GI:323697313
CY084145

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084145

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Public DB hit
GI:323697294
CY084137

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084137

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Public DB hit
GI:323697275
CY084129

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084129

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Public DB hit
GI:323697256
CY084121

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084121

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Public DB hit
GI:323696939
CY084113

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084113

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Public DB hit
GI:323696920
CY084105

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084105

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Public DB hit
GI:323696901
CY084097

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084097

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Public DB hit
GI:323696882
CY084089

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084089

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Public DB hit
GI:323696442
CY084081

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084081

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Public DB hit
GI:323696423
CY084073

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084073

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Public DB hit
GI:323696404
CY084065

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084065

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Public DB hit
GI:323696385
CY084057

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084057

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Public DB hit
GI:323696132
CY084049

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084049

100% cov

Alignment Length
1,552 bp
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Public DB hit
GI:323696094
CY084033

Hit length
1,552 bp

E Value
0E0

BLAST Score
2,867.1 bits

Similarity

100%

Coverage

99.17%

Alignment (schematic)

SEQ ID NO 4

99.17% cov
CY084033

100% cov

Alignment Length
1,552 bp

Occurrence

91 times in PatSeqDB

in 19 families
(13 referenced in claims)
in 87 documents

Tools

PatSeq Finder

SEQ ID NO

Length

1,027

Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism:
Influenza A

Determined organism:

Influenza A virus (A/reassortant/NYMC X-179A(California/07/2009 x NYMC X-157)(H1N1))
Influenza A virus (A/reassortant/NYMC X-179A(California/07/2009 x NYMC X-157)(H1N1))
Public DB hit
GI:292495995
CY058522

Hit length
1,027 bp

E Value
0E0

BLAST Score
1,892.1 bits

Similarity

99.9%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
CY058522

100% cov

Alignment Length
1,027 bp

CIGAR string
3MN1023M mismatches: 1 - insertions: 0 - deletions: 0
Influenza A virus (A/lvPR8/34(H1N1))
Influenza A virus (A/lvPR8/34(H1N1))
Public DB hit
GI:145322858
EF190985

Hit length
1,027 bp

E Value
0E0

BLAST Score
1,892.1 bits

Similarity

99.9%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
EF190985

100% cov

Alignment Length
1,027 bp

CIGAR string
3MN1023M mismatches: 1 - insertions: 0 - deletions: 0
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Public DB hit
GI:126599292
EF467824
1 of 2 hits reported for Influenza A virus (A/Puerto Rico/8/1934(H1N1)).

Hit length
1,027 bp

E Value
0E0

BLAST Score
1,886.5 bits

Similarity

99.81%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
EF467824

100% cov

Alignment Length
1,027 bp

CIGAR string
3MN680MN342M mismatches: 2 - insertions: 0 - deletions: 0
Influenza A virus (A/England/939/69 x A/PR/8/34)
Influenza A virus (A/England/939/69 x A/PR/8/34)
Public DB hit
GI:10241738
AJ298948

Hit length
1,027 bp

E Value
0E0

BLAST Score
1,886.5 bits

Similarity

99.81%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AJ298948

100% cov

Alignment Length
1,027 bp
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Public DB hit
GI:21693174
AF389121

Hit length
1,027 bp

E Value
0E0

BLAST Score
1,881 bits

Similarity

99.71%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AF389121

100% cov

Alignment Length
1,027 bp
Influenza A virus (A/X-31(H3N2))
Influenza A virus (A/X-31(H3N2))
Public DB hit
GI:9049380
AB036778

Hit length
1,027 bp

E Value
0E0

BLAST Score
1,869.9 bits

Similarity

99.51%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AB036778

100% cov

Alignment Length
1,027 bp
Influenza A virus (A/hvPR8/34(H1N1))
Influenza A virus (A/hvPR8/34(H1N1))
Public DB hit
GI:145322840
EF190977

Hit length
1,027 bp

E Value
0E0

BLAST Score
1,864.4 bits

Similarity

99.42%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
EF190977

100% cov

Alignment Length
1,027 bp
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Public DB hit
GI:323697403
CY084183

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084183

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Public DB hit
GI:323697384
CY084175

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084175

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Public DB hit
GI:323697365
CY084167

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084167

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Public DB hit
GI:323697346
CY084159

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084159

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Public DB hit
GI:323697327
CY084151

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084151

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Public DB hit
GI:323697308
CY084143

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084143

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Public DB hit
GI:323697289
CY084135

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084135

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Public DB hit
GI:323697270
CY084127

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084127

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Public DB hit
GI:323697251
CY084119

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084119

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Public DB hit
GI:323696934
CY084111

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084111

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Public DB hit
GI:323696915
CY084103

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084103

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Public DB hit
GI:323696896
CY084095

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084095

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Public DB hit
GI:323696877
CY084087

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084087

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Public DB hit
GI:323696437
CY084079

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084079

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Public DB hit
GI:323696418
CY084071

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084071

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Public DB hit
GI:323696399
CY084063

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084063

100% cov

Alignment Length
1,002 bp
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Public DB hit
GI:323696380
CY084055

Hit length
1,002 bp

E Value
0E0

BLAST Score
1,851.5 bits

Similarity

100%

Coverage

97.57%

Alignment (schematic)

SEQ ID NO 5

97.57% cov
CY084055

100% cov

Alignment Length
1,002 bp

Occurrence

185 times in PatSeqDB

in 24 extended families
(17 referenced in claims)
in 25 simple families
(18 referenced in claims)
in 165 documents

Tools

PatSeq Finder

SEQ ID NO

Length

890

Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism:
Influenza A

Determined organism:

Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Public DB hit
GI:126599211
EF467817
1 of 2 hits reported for Influenza A virus (A/Puerto Rico/8/1934(H1N1)).

Hit length
890 bp

E Value
0E0

BLAST Score
1,639.1 bits

Similarity

99.89%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
EF467817

100% cov

Alignment Length
890 bp

CIGAR string
109MN780M mismatches: 1 - insertions: 0 - deletions: 0
Influenza A virus (A/Leningrad/1954/1(H1N1))
Influenza A virus (A/Leningrad/1954/1(H1N1))
Public DB hit
GI:60716
X52146

Hit length
890 bp

E Value
0E0

BLAST Score
1,633.6 bits

Similarity

99.78%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
X52146

100% cov

Alignment Length
890 bp

CIGAR string
109MN188MN591M mismatches: 2 - insertions: 0 - deletions: 0
Influenza A virus (A/X-31(H3N2))
Influenza A virus (A/X-31(H3N2))
Public DB hit
GI:9049377
AB036777

Hit length
890 bp

E Value
0E0

BLAST Score
1,622.5 bits

Similarity

99.55%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AB036777

100% cov

Alignment Length
890 bp

CIGAR string
20MN88MN753MN2MN23M mismatches: 4 - insertions: 0 - deletions: 0
Influenza A virus (A/lvPR8/34(H1N1))
Influenza A virus (A/lvPR8/34(H1N1))
Public DB hit
GI:145322861
EF190986

Hit length
890 bp

E Value
0E0

BLAST Score
1,611.4 bits

Similarity

99.33%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
EF190986

100% cov

Alignment Length
890 bp
Influenza A virus (A/reassortant/NYMC X-175C(Uruguay/716/2007 x Puerto Rico/8/1934)(H3N2))
Influenza A virus (A/reassortant/NYMC X-175C(Uruguay/716/2007 x Puerto Rico/8/1934)(H3N2))
Public DB hit
GI:292495962
CY058507

Hit length
890 bp

E Value
0E0

BLAST Score
1,605.9 bits

Similarity

99.21%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
CY058507

100% cov

Alignment Length
890 bp
Influenza A virus (A/reassortant/NYMC X-179(California/07/2009 x NYMC X-157)(H1N1))
Influenza A virus (A/reassortant/NYMC X-179(California/07/2009 x NYMC X-157)(H1N1))
Public DB hit
GI:292495980
CY058515

Hit length
890 bp

E Value
0E0

BLAST Score
1,600.3 bits

Similarity

99.1%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
CY058515

100% cov

Alignment Length
890 bp
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Public DB hit
GI:21693177
AF389122

Hit length
890 bp

E Value
0E0

BLAST Score
1,600.3 bits

Similarity

99.1%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF389122

100% cov

Alignment Length
890 bp
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Public DB hit
GI:323697410
CY084186

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084186

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Public DB hit
GI:323697391
CY084178

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084178

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Public DB hit
GI:323697372
CY084170

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084170

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Public DB hit
GI:323697353
CY084162

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084162

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Public DB hit
GI:323697334
CY084154

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084154

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Public DB hit
GI:323697315
CY084146

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084146

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Public DB hit
GI:323697296
CY084138

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084138

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Public DB hit
GI:323697277
CY084130

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084130

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Public DB hit
GI:323697258
CY084122

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084122

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Public DB hit
GI:323696941
CY084114

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084114

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Public DB hit
GI:323696922
CY084106

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084106

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Public DB hit
GI:323696903
CY084098

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084098

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Public DB hit
GI:323696884
CY084090

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084090

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Public DB hit
GI:323696444
CY084082

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084082

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Public DB hit
GI:323696425
CY084074

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084074

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Public DB hit
GI:323696406
CY084066

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084066

100% cov

Alignment Length
865 bp
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Public DB hit
GI:323696387
CY084058

Hit length
865 bp

E Value
0E0

BLAST Score
1,598.5 bits

Similarity

100%

Coverage

97.19%

Alignment (schematic)

SEQ ID NO 6

97.19% cov
CY084058

100% cov

Alignment Length
865 bp

Occurrence

86 times in PatSeqDB

in 17 families
(12 referenced in claims)
in 84 documents

Tools

PatSeq Finder

SEQ ID NO

Length

1,775

Type

nucleotide

Locations

Claims, Detailed Description

Declared organism:
Influenza A

Determined organism:

Influenza A virus (A/lvPR8/34(H1N1))
Influenza A virus (A/lvPR8/34(H1N1))
Public DB hit
GI:145322852
EF190982

Hit length
1,775 bp

E Value
0E0

BLAST Score
3,273.4 bits

Similarity

99.94%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
EF190982

100% cov

Alignment Length
1,775 bp

CIGAR string
1056MN718M mismatches: 1 - insertions: 0 - deletions: 0
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Public DB hit
GI:126599270
EF467821
1 of 2 hits reported for Influenza A virus (A/Puerto Rico/8/1934(H1N1)).

Hit length
1,775 bp

E Value
0E0

BLAST Score
3,273.4 bits

Similarity

99.94%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
EF467821

100% cov

Alignment Length
1,775 bp

CIGAR string
1041MN733M mismatches: 1 - insertions: 0 - deletions: 0
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Public DB hit
GI:21693168
AF389118

Hit length
1,775 bp

E Value
0E0

BLAST Score
3,256.8 bits

Similarity

99.77%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
AF389118

100% cov

Alignment Length
1,775 bp

CIGAR string
59MN590MN390MN703MN29M mismatches: 4 - insertions: 0 - deletions: 0
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Public DB hit
GI:323697401
CY084182

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,232.8 bits

Similarity

100%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084182

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-WG/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-WG/1934(H1N1))
Public DB hit
GI:323696030
CY084006

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,232.8 bits

Similarity

100%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084006

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Public DB hit
GI:323697306
CY084142

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084142

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Public DB hit
GI:323697287
CY084134

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084134

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV2/1934(H1N1))
Public DB hit
GI:323697268
CY084126

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084126

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Public DB hit
GI:323696932
CY084110

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084110

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV9/1934(H1N1))
Public DB hit
GI:323696913
CY084102

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084102

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Public DB hit
GI:323696894
CY084094

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084094

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Public DB hit
GI:323696435
CY084078

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084078

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Public DB hit
GI:323696416
CY084070

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084070

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Public DB hit
GI:323696397
CY084062

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084062

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Public DB hit
GI:323696378
CY084054

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084054

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Public DB hit
GI:323696125
CY084046

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084046

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-CV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV6/1934(H1N1))
Public DB hit
GI:323696106
CY084038

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084038

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Public DB hit
GI:323696087
CY084030

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084030

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-CV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV2/1934(H1N1))
Public DB hit
GI:323696068
CY084022

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084022

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-CV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV1/1934(H1N1))
Public DB hit
GI:323696049
CY084014

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.94%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084014

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Public DB hit
GI:323697382
CY084174

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,221.7 bits

Similarity

99.89%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084174

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Public DB hit
GI:323697363
CY084166

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,221.7 bits

Similarity

99.89%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084166

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Public DB hit
GI:323697344
CY084158

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,221.7 bits

Similarity

99.89%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084158

100% cov

Alignment Length
1,750 bp
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Public DB hit
GI:323697325
CY084150

Hit length
1,750 bp

E Value
0E0

BLAST Score
3,221.7 bits

Similarity

99.89%

Coverage

98.59%

Alignment (schematic)

SEQ ID NO 7

98.59% cov
CY084150

100% cov

Alignment Length
1,750 bp

Occurrence

81 times in PatSeqDB

in 14 families
(4 referenced in claims)
in 79 documents

Tools

PatSeq Finder

SEQ ID NO

Length

1,413

Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism:
Influenza A

Determined organism:

Influenza A virus (A/lvPR8/34(H1N1))
Influenza A virus (A/lvPR8/34(H1N1))
Public DB hit
GI:145322856
EF190984

Hit length
1,413 bp

E Value
0E0

BLAST Score
2,604.9 bits

Similarity

99.93%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
EF190984

100% cov

Alignment Length
1,413 bp

CIGAR string
3MN1409M mismatches: 1 - insertions: 0 - deletions: 0
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8/1934(H1N1))
Public DB hit
GI:126599290
EF467823
1 of 2 hits reported for Influenza A virus (A/Puerto Rico/8/1934(H1N1)).

Hit length
1,413 bp

E Value
0E0

BLAST Score
2,593.8 bits

Similarity

99.79%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
EF467823

100% cov

Alignment Length
1,413 bp

CIGAR string
3MN8MN759MN640M mismatches: 3 - insertions: 0 - deletions: 0
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
Public DB hit
GI:21693172
AF389120

Hit length
1,413 bp

E Value
0E0

BLAST Score
2,577.2 bits

Similarity

99.58%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
AF389120

100% cov

Alignment Length
1,413 bp

CIGAR string
3MN38MN368MN447MN281MN68MN202M mismatches: 6 - insertions: 0 - deletions: 0
Influenza A virus (A/Puerto Rico/8/1934(Cambridge)(H1N1))
Influenza A virus (A/Puerto Rico/8/1934(Cambridge)(H1N1))
Public DB hit
GI:324507
J02146

Hit length
1,413 bp

E Value
0E0

BLAST Score
2,566.1 bits

Similarity

99.43%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
J02146

100% cov

Alignment Length
1,413 bp
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-V24/1934(H1N1))
Public DB hit
GI:323697406
CY084184

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084184

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))
Public DB hit
GI:323697387
CY084176

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084176

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV7/1934(H1N1))
Public DB hit
GI:323697368
CY084168

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084168

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV6/1934(H1N1))
Public DB hit
GI:323697349
CY084160

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084160

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV5/1934(H1N1))
Public DB hit
GI:323697330
CY084152

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084152

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV4/1934(H1N1))
Public DB hit
GI:323697311
CY084144

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084144

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV3/1934(H1N1))
Public DB hit
GI:323697292
CY084136

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084136

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-KV1/1934(H1N1))
Public DB hit
GI:323697254
CY084120

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084120

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV18/1934(H1N1))
Public DB hit
GI:323696937
CY084112

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084112

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV3/1934(H1N1))
Public DB hit
GI:323696899
CY084096

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084096

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV2/1934(H1N1))
Public DB hit
GI:323696880
CY084088

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084088

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-JV1/1934(H1N1))
Public DB hit
GI:323696440
CY084080

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084080

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV10/1934(H1N1))
Public DB hit
GI:323696421
CY084072

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084072

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV9/1934(H1N1))
Public DB hit
GI:323696402
CY084064

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084064

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV8/1934(H1N1))
Public DB hit
GI:323696383
CY084056

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084056

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV7/1934(H1N1))
Public DB hit
GI:323696130
CY084048

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084048

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-CV6/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV6/1934(H1N1))
Public DB hit
GI:323696111
CY084040

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084040

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV5/1934(H1N1))
Public DB hit
GI:323696092
CY084032

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084032

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-CV2/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-CV2/1934(H1N1))
Public DB hit
GI:323696073
CY084024

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084024

100% cov

Alignment Length
1,388 bp
Influenza A virus (A/Puerto Rico/8-WG/1934(H1N1))
Influenza A virus (A/Puerto Rico/8-WG/1934(H1N1))
Public DB hit
GI:323696035
CY084008

Hit length
1,388 bp

E Value
0E0

BLAST Score
2,564.3 bits

Similarity

100%

Coverage

98.23%

Alignment (schematic)

SEQ ID NO 8

98.23% cov
CY084008

100% cov

Alignment Length
1,388 bp

Occurrence

77 times in PatSeqDB

in 13 families
(3 referenced in claims)
in 75 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

nucleotide

Locations

Detailed Description

Declared organism:
Artificial

Determined organism:

Occurrence

22 times in PatSeqDB

in 2 families
in 20 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

nucleotide

Locations

Detailed Description

Declared organism:
Artificial

Determined organism:

Influenza A virus (A/California/VRDL191/2009(H1N1))
Influenza A virus (A/California/VRDL191/2009(H1N1))
Public DB hit
GI:336475897
CY092351

Hit length
2,317 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY092351

1.04% cov

Alignment Length
24 bp

CIGAR string
24M mismatches: 0 - insertions: 0 - deletions: 0
Influenza A virus (A/California/VRDL190/2009(H1N1))
Influenza A virus (A/California/VRDL190/2009(H1N1))
Public DB hit
GI:336475878
CY092343

Hit length
2,317 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY092343

1.04% cov

Alignment Length
24 bp

CIGAR string
24M mismatches: 0 - insertions: 0 - deletions: 0
Influenza A virus (A/California/VRDL372/2009(H1N1))
Influenza A virus (A/California/VRDL372/2009(H1N1))
Public DB hit
GI:336020302
CY092099

Hit length
2,284 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY092099

1.05% cov

Alignment Length
24 bp

CIGAR string
24M mismatches: 0 - insertions: 0 - deletions: 0
Influenza A virus (A/Taiwan/1/1986(H1N1))
Influenza A virus (A/Taiwan/1/1986(H1N1))
Public DB hit
GI:330871638
JF816651
1 of 12 hits reported for Influenza A virus (A/Taiwan/1/1986(H1N1)).

Hit length
2,341 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
JF816651

1.03% cov

Alignment Length
24 bp
Influenza A virus (A/KOL/46/2009(H1N1))
Influenza A virus (A/KOL/46/2009(H1N1))
Public DB hit
GI:331693865
HQ154076

Hit length
2,274 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
HQ154076

1.06% cov

Alignment Length
24 bp
Influenza A virus (A/Boston/32/2009(H1N1))
Influenza A virus (A/Boston/32/2009(H1N1))
Public DB hit
GI:329047546
CY089787

Hit length
2,314 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY089787

1.04% cov

Alignment Length
24 bp
Influenza A virus (A/Boston/87/2009(H1N1))
Influenza A virus (A/Boston/87/2009(H1N1))
Public DB hit
GI:329047486
CY089763

Hit length
2,317 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY089763

1.04% cov

Alignment Length
24 bp
Influenza A virus (A/Boston/19/2009(H1N1))
Influenza A virus (A/Boston/19/2009(H1N1))
Public DB hit
GI:329047376
CY089715

Hit length
2,314 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY089715

1.04% cov

Alignment Length
24 bp
Influenza A virus (A/Boston/6/2009(H1N1))
Influenza A virus (A/Boston/6/2009(H1N1))
Public DB hit
GI:327407025
CY089041

Hit length
2,314 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY089041

1.04% cov

Alignment Length
24 bp
Influenza A virus (A/Boston/94/2009(H1N1))
Influenza A virus (A/Boston/94/2009(H1N1))
Public DB hit
GI:327408951
CY089177

Hit length
2,314 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY089177

1.04% cov

Alignment Length
24 bp
Influenza A virus (A/Boston/82/2009(H1N1))
Influenza A virus (A/Boston/82/2009(H1N1))
Public DB hit
GI:327408932
CY089169

Hit length
2,314 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY089169

1.04% cov

Alignment Length
24 bp
Influenza A virus (A/Boston/59/2009(H1N1))
Influenza A virus (A/Boston/59/2009(H1N1))
Public DB hit
GI:327408275
CY089113

Hit length
2,314 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY089113

1.04% cov

Alignment Length
24 bp
Influenza A virus (A/Boston/54/2009(H1N1))
Influenza A virus (A/Boston/54/2009(H1N1))
Public DB hit
GI:327408056
CY089105

Hit length
2,314 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY089105

1.04% cov

Alignment Length
24 bp
Influenza A virus (A/Boston/50/2009(H1N1))
Influenza A virus (A/Boston/50/2009(H1N1))
Public DB hit
GI:327407780
CY089097

Hit length
2,314 bp

E Value
6.88E-4

BLAST Score
48.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY089097

1.04% cov

Alignment Length
24 bp

Occurrence

22 times in PatSeqDB

in 2 families
in 20 documents

Tools

PatSeq Finder

Search for Biological Sequences disclosed in Patents

38 sequences found in this patent (in total)

Displaying 1 - 10 of 38 sequences

Influenza A virus (A/reassortant/NYMC X-179A(California/07/2009 x NYMC X-157)(H1N1))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Influenza A virus (A/reassortant/NYMC X-179(California/07/2009 x NYMC X-157)(H1N1))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Influenza A virus (A/lvPR8/34(H1N1))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Influenza A virus (A/England/939/69(H3N2)) x (A/PR/8/34(H1N1))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Influenza A virus (A/reassortant/NYMC X-175C(Uruguay/716/2007 x Puerto Rico/8/1934)(H3N2))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Influenza A virus (A/X-31(H3N2))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Influenza A virus (A/Puerto Rico/8/1934(H1N1))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Influenza A virus (A/Puerto Rico/8-KV8/1934(H1N1))

Public DB hit