Loading...

Search for Biological Sequences disclosed in Patents

Discover PatSeq Finder: Search and analyse similar sequence matches in the Lens PatSeq database effortlessly using PatSeq Finder. Scan 480M+ biological sequences disclosed in patents on a privacy-assured platform and give your IP strategy the edge.

View PatSeq Dismiss
Data obtained from: USPTO Fulltext
7 sequences found in this patent (in total)

Displaying 7 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
29
Type
RNA
Locations
Claims, Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
29
Type
RNA
Locations
Claims, Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
29
Type
RNA
Locations
Claims, Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
29
Type
RNA
Locations
Claims, Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
94
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Bacillus subtilis BSn5

    Bacillus subtilis BSn5

    • Public DB hit
      GI:320017650
      CP002468
    • Hit length
      4,093,599 bp
    • E Value
      3.08E-39
    • BLAST Score
      169.2 bits
    • Similarity
      100%
    • Coverage
      96.81%
    • Alignment (schematic)

      SEQ ID NO 5
      96.81% cov
      CP002468
      0% cov
    • Alignment Length
      91 bp
    • CIGAR string
      91M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus subtilis subsp. subtilis str. 168

    Bacillus subtilis subsp. subtilis str. 168

    • Public DB hit
      GI:225184640
      AL009126
    • Hit length
      4,215,606 bp
    • E Value
      3.08E-39
    • BLAST Score
      169.2 bits
    • Similarity
      100%
    • Coverage
      96.81%
    • Alignment (schematic)

      SEQ ID NO 5
      96.81% cov
      AL009126
      0% cov
    • Alignment Length
      91 bp
    • CIGAR string
      91M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus subtilis

    Bacillus subtilis

    • Public DB hit
      GI:2293135
      AF008220
      1 of 3 hits reported for Bacillus subtilis.
    • Hit length
      220,060 bp
    • E Value
      3.08E-39
    • BLAST Score
      169.2 bits
    • Similarity
      100%
    • Coverage
      96.81%
    • Alignment (schematic)

      SEQ ID NO 5
      96.81% cov
      AF008220
      0.04% cov
    • Alignment Length
      91 bp
    • CIGAR string
      91M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus subtilis subsp. spizizenii str. W23

    Bacillus subtilis subsp. spizizenii str. W23

    • Public DB hit
      GI:305410941
      CP002183
    • Hit length
      4,027,676 bp
    • E Value
      1.44E-37
    • BLAST Score
      163.6 bits
    • Similarity
      98.9%
    • Coverage
      96.81%
    • Alignment (schematic)

      SEQ ID NO 5
      96.81% cov
      CP002183
      0% cov
    • Alignment Length
      91 bp
  • Bacillus atrophaeus 1942

    Bacillus atrophaeus 1942

    • Public DB hit
      GI:310867486
      CP002207
    • Hit length
      4,168,266 bp
    • E Value
      1.88E-26
    • BLAST Score
      126.7 bits
    • Similarity
      91.49%
    • Coverage
      96.81%
    • Alignment (schematic)

      SEQ ID NO 5
      96.81% cov
      CP002207
      0% cov
    • Alignment Length
      94 bp
  • Bacillus amyloliquefaciens LL3

    Bacillus amyloliquefaciens LL3

    • Public DB hit
      GI:328909959
      CP002634
    • Hit length
      3,995,227 bp
    • E Value
      5.31E-17
    • BLAST Score
      95.3 bits
    • Similarity
      87.21%
    • Coverage
      90.43%
    • Alignment (schematic)

      SEQ ID NO 5
      90.43% cov
      CP002634
      0% cov
    • Alignment Length
      86 bp
  • Bacillus amyloliquefaciens TA208

    Bacillus amyloliquefaciens TA208

    • Public DB hit
      GI:328551700
      CP002627
    • Hit length
      3,937,511 bp
    • E Value
      5.31E-17
    • BLAST Score
      95.3 bits
    • Similarity
      87.21%
    • Coverage
      90.43%
    • Alignment (schematic)

      SEQ ID NO 5
      90.43% cov
      CP002627
      0% cov
    • Alignment Length
      86 bp
  • Bacillus amyloliquefaciens DSM 7

    Bacillus amyloliquefaciens DSM 7

    • Public DB hit
      GI:307604755
      FN597644
    • Hit length
      3,980,199 bp
    • E Value
      5.31E-17
    • BLAST Score
      95.3 bits
    • Similarity
      87.21%
    • Coverage
      90.43%
    • Alignment (schematic)

      SEQ ID NO 5
      90.43% cov
      FN597644
      0% cov
    • Alignment Length
      86 bp
  • Bacillus amyloliquefaciens subsp. plantarum str. FZB42

    Bacillus amyloliquefaciens subsp. plantarum str. FZB42

    • Public DB hit
      GI:154350369
      CP000560
    • Hit length
      3,918,589 bp
    • E Value
      2.47E-15
    • BLAST Score
      89.8 bits
    • Similarity
      86.05%
    • Coverage
      90.43%
    • Alignment (schematic)

      SEQ ID NO 5
      90.43% cov
      CP000560
      0% cov
    • Alignment Length
      86 bp
  • Bacillus licheniformis DSM 13 = ATCC 14580

    Bacillus licheniformis DSM 13 = ATCC 14580

    • Public DB hit
      GI:145902672
      CP000002
      1 of 2 hits reported for Bacillus licheniformis DSM 13 = ATCC 14580.
    • Hit length
      4,222,597 bp
    • E Value
      1.16E-8
    • BLAST Score
      67.6 bits
    • Similarity
      80.61%
    • Coverage
      96.81%
    • Alignment (schematic)

      SEQ ID NO 5
      96.81% cov
      CP000002
      0% cov
    • Alignment Length
      98 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
32
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Bacillus subtilis BSn5

    Bacillus subtilis BSn5

    • Public DB hit
      GI:320017650
      CP002468
    • Hit length
      4,093,599 bp
    • E Value
      2.78E-8
    • BLAST Score
      63.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002468
      0% cov
    • Alignment Length
      32 bp
    • CIGAR string
      32M mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus subtilis subsp. subtilis str. 168

    Bacillus subtilis subsp. subtilis str. 168

    • Public DB hit
      GI:225184640
      AL009126
    • Hit length
      4,215,606 bp
    • E Value
      2.78E-8
    • BLAST Score
      63.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AL009126
      0% cov
    • Alignment Length
      32 bp
    • CIGAR string
      32M mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus subtilis

    Bacillus subtilis

    • Public DB hit
      GI:2293135
      AF008220
      1 of 3 hits reported for Bacillus subtilis.
    • Hit length
      220,060 bp
    • E Value
      2.78E-8
    • BLAST Score
      63.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AF008220
      0.01% cov
    • Alignment Length
      32 bp
    • CIGAR string
      32M mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus subtilis subsp. spizizenii str. W23

    Bacillus subtilis subsp. spizizenii str. W23

    • Public DB hit
      GI:305410941
      CP002183
    • Hit length
      4,027,676 bp
    • E Value
      6.77E-6
    • BLAST Score
      56 bits
    • Similarity
      96.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002183
      0% cov
    • Alignment Length
      32 bp
  • Bacillus atrophaeus 1942

    Bacillus atrophaeus 1942

    • Public DB hit
      GI:310867486
      CP002207
    • Hit length
      4,168,266 bp
    • E Value
      1.65E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002207
      0% cov
    • Alignment Length
      32 bp
  • Bacillus thuringiensis serovar finitimus YBT-020

    Bacillus thuringiensis serovar finitimus YBT-020

    • Public DB hit
      GI:324323994
      CP002508
    • Hit length
      5,355,490 bp
    • E Value
      6.52E-3
    • BLAST Score
      46.1 bits
    • Similarity
      93.55%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 6
      96.88% cov
      CP002508
      0% cov
    • Alignment Length
      31 bp
  • Bacillus anthracis str. A0248

    Bacillus anthracis str. A0248

    • Public DB hit
      GI:229264291
      CP001598
    • Hit length
      5,227,419 bp
    • E Value
      6.52E-3
    • BLAST Score
      46.1 bits
    • Similarity
      93.55%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 6
      96.88% cov
      CP001598
      0% cov
    • Alignment Length
      31 bp
  • Bacillus anthracis str. CDC 684

    Bacillus anthracis str. CDC 684

    • Public DB hit
      GI:227002338
      CP001215
    • Hit length
      5,230,115 bp
    • E Value
      6.52E-3
    • BLAST Score
      46.1 bits
    • Similarity
      93.55%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 6
      96.88% cov
      CP001215
      0% cov
    • Alignment Length
      31 bp
  • Bacillus cereus Q1

    Bacillus cereus Q1

    • Public DB hit
      GI:221237819
      CP000227
    • Hit length
      5,214,195 bp
    • E Value
      6.52E-3
    • BLAST Score
      46.1 bits
    • Similarity
      93.55%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 6
      96.88% cov
      CP000227
      0% cov
    • Alignment Length
      31 bp
  • Bacillus anthracis str. 'Ames Ancestor'

    Bacillus anthracis str. 'Ames Ancestor'

    • Public DB hit
      GI:50082967
      AE017334
    • Hit length
      5,227,419 bp
    • E Value
      6.52E-3
    • BLAST Score
      46.1 bits
    • Similarity
      93.55%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 6
      96.88% cov
      AE017334
      0% cov
    • Alignment Length
      31 bp
  • Bacillus anthracis str. Sterne

    Bacillus anthracis str. Sterne

    • Public DB hit
      GI:49176966
      AE017225
    • Hit length
      5,228,663 bp
    • E Value
      6.52E-3
    • BLAST Score
      46.1 bits
    • Similarity
      93.55%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 6
      96.88% cov
      AE017225
      0% cov
    • Alignment Length
      31 bp
  • Bacillus cereus ATCC 10987

    Bacillus cereus ATCC 10987

    • Public DB hit
      GI:42740913
      AE017194
    • Hit length
      5,224,283 bp
    • E Value
      6.52E-3
    • BLAST Score
      46.1 bits
    • Similarity
      93.55%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 6
      96.88% cov
      AE017194
      0% cov
    • Alignment Length
      31 bp
  • Bacillus anthracis str. Ames

    Bacillus anthracis str. Ames

    • Public DB hit
      GI:30260185
      AE016879
    • Hit length
      5,227,293 bp
    • E Value
      6.52E-3
    • BLAST Score
      46.1 bits
    • Similarity
      93.55%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 6
      96.88% cov
      AE016879
      0% cov
    • Alignment Length
      31 bp
  • Geobacillus thermoglucosidasius C56-YS93

    Geobacillus thermoglucosidasius C56-YS93

    • Public DB hit
      GI:335360401
      CP002835
    • Hit length
      3,893,306 bp
    • E Value
      4.02E-1
    • BLAST Score
      40.1 bits
    • Similarity
      90.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002835
      0% cov
    • Alignment Length
      32 bp
  • Enterococcus faecalis OG1RF

    Enterococcus faecalis OG1RF

    • Public DB hit
      GI:327533853
      CP002621
    • Hit length
      2,739,625 bp
    • E Value
      4.02E-1
    • BLAST Score
      40.1 bits
    • Similarity
      90.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002621
      0% cov
    • Alignment Length
      32 bp
  • Enterococcus faecalis 62

    Enterococcus faecalis 62

    • Public DB hit
      GI:323478858
      CP002491
    • Hit length
      2,988,673 bp
    • E Value
      4.02E-1
    • BLAST Score
      40.1 bits
    • Similarity
      90.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002491
      0% cov
    • Alignment Length
      32 bp
  • Geobacillus sp. Y4.1MC1

    Geobacillus sp. Y4.1MC1

    • Public DB hit
      GI:311214252
      CP002293
    • Hit length
      3,840,330 bp
    • E Value
      4.02E-1
    • BLAST Score
      40.1 bits
    • Similarity
      90.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002293
      0% cov
    • Alignment Length
      32 bp
  • Enterococcus sp. 7L76

    Enterococcus sp. 7L76

    • Public DB hit
      GI:295112306
      FP929058
    • Hit length
      3,096,657 bp
    • E Value
      4.02E-1
    • BLAST Score
      40.1 bits
    • Similarity
      90.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FP929058
      0% cov
    • Alignment Length
      32 bp
  • Geobacillus sp. WCH70

    Geobacillus sp. WCH70

    • Public DB hit
      GI:239805877
      CP001638
    • Hit length
      3,464,618 bp
    • E Value
      4.02E-1
    • BLAST Score
      40.1 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001638
      0% cov
    • Alignment Length
      32 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
32
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Bacillus subtilis BSn5

    Bacillus subtilis BSn5

    • Public DB hit
      GI:320017650
      CP002468
    • Hit length
      4,093,599 bp
    • E Value
      2.78E-8
    • BLAST Score
      63.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002468
      0% cov
    • Alignment Length
      32 bp
    • CIGAR string
      32M mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus subtilis subsp. subtilis str. 168

    Bacillus subtilis subsp. subtilis str. 168

    • Public DB hit
      GI:225184640
      AL009126
    • Hit length
      4,215,606 bp
    • E Value
      2.78E-8
    • BLAST Score
      63.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AL009126
      0% cov
    • Alignment Length
      32 bp
    • CIGAR string
      32M mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus subtilis

    Bacillus subtilis

    • Public DB hit
      GI:2293135
      AF008220
      1 of 3 hits reported for Bacillus subtilis.
    • Hit length
      220,060 bp
    • E Value
      2.78E-8
    • BLAST Score
      63.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AF008220
      0.01% cov
    • Alignment Length
      32 bp
    • CIGAR string
      32M mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus atrophaeus 1942

    Bacillus atrophaeus 1942

    • Public DB hit
      GI:310867486
      CP002207
    • Hit length
      4,168,266 bp
    • E Value
      1.1E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 7
      96.88% cov
      CP002207
      0% cov
    • Alignment Length
      31 bp
  • Bacillus subtilis subsp. spizizenii str. W23

    Bacillus subtilis subsp. spizizenii str. W23

    • Public DB hit
      GI:305410941
      CP002183
    • Hit length
      4,027,676 bp
    • E Value
      1.1E-7
    • BLAST Score
      61.9 bits
    • Similarity
      100%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 7
      96.88% cov
      CP002183
      0% cov
    • Alignment Length
      31 bp
  • Bacillus amyloliquefaciens LL3

    Bacillus amyloliquefaciens LL3

    • Public DB hit
      GI:328909959
      CP002634
    • Hit length
      3,995,227 bp
    • E Value
      1.02E-1
    • BLAST Score
      42.1 bits
    • Similarity
      93.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002634
      0% cov
    • Alignment Length
      33 bp
  • Bacillus amyloliquefaciens TA208

    Bacillus amyloliquefaciens TA208

    • Public DB hit
      GI:328551700
      CP002627
    • Hit length
      3,937,511 bp
    • E Value
      1.02E-1
    • BLAST Score
      42.1 bits
    • Similarity
      93.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002627
      0% cov
    • Alignment Length
      33 bp
  • Bacillus amyloliquefaciens DSM 7

    Bacillus amyloliquefaciens DSM 7

    • Public DB hit
      GI:307604755
      FN597644
    • Hit length
      3,980,199 bp
    • E Value
      1.02E-1
    • BLAST Score
      42.1 bits
    • Similarity
      93.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      FN597644
      0% cov
    • Alignment Length
      33 bp
  • Bacillus amyloliquefaciens subsp. plantarum str. FZB42

    Bacillus amyloliquefaciens subsp. plantarum str. FZB42

    • Public DB hit
      GI:154350369
      CP000560
    • Hit length
      3,918,589 bp
    • E Value
      1.02E-1
    • BLAST Score
      42.1 bits
    • Similarity
      93.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP000560
      0% cov
    • Alignment Length
      33 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder

Filter Sequences

Clear

Sign in to the Lens

Forgot Password? Register New Account

Language Improvements

We have been busy updating our localisation and all existing languages.

Much of these translations have been done using machine translation with a check from a native speaker, however not all elements of the UI have been checked for each language. If you see a term that is not translated correctly or should be improved, please contact Support.

  Don't show again
Feedback