Patents
US 10174085 B2

Toxoid Peptides Derived From Phenol Soluble Modulin, Delta Toxin, Superantigens, And Fusions Thereof

Granted Patent
US 10174085 B2
064-987-911-666-568
Data obtained from: EMBL-EBI Pat DDBJ Pat NCBI GenBank USPTO Fulltext
66 sequences found in this patent (in total)

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Download sequences in fasta format: 57 peptides 9 nucleotides

Displaying 1 - 10 of 66 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
26
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Staphylococcus aureus
Determined organism
  • Staphylococcus aureus subsp. aureus MRSA252

    Staphylococcus aureus subsp. aureus MRSA252

    • Public DB hit
      GI:49484261
      YP_041485
    • Hit length
      45 aa
    • E Value
      1.85E-5
    • BLAST Score
      53.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_041485
      57.78% cov
    • Alignment Length
      26 aa
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus Mu50

    Staphylococcus aureus subsp. aureus Mu50

    • Public DB hit
      GI:15925025
      NP_372559
    • Hit length
      44 aa
    • E Value
      1.93E-5
    • BLAST Score
      53.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_372559
      59.09% cov
    • Alignment Length
      26 aa
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus aureus O11

    Staphylococcus aureus O11

    • Public DB hit
      GI:323439901
      EGA97617
    • Hit length
      29 aa
    • E Value
      2.98E-5
    • BLAST Score
      52.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EGA97617
      89.66% cov
    • Alignment Length
      26 aa
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus JH9

    Staphylococcus aureus subsp. aureus JH9

    • Public DB hit
      GI:148268488
      YP_001247431
    • Hit length
      26 aa
    • E Value
      3.37E-5
    • BLAST Score
      52.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_001247431
      100% cov
    • Alignment Length
      26 aa
  • Staphylococcus aureus subsp. aureus MSSA476

    Staphylococcus aureus subsp. aureus MSSA476

    • Public DB hit
      GI:49486830
      YP_044051
    • Hit length
      45 aa
    • E Value
      8.66E-5
    • BLAST Score
      51.2 bits
    • Similarity
      96.15%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_044051
      57.78% cov
    • Alignment Length
      26 aa
  • Staphylococcus aureus subsp. aureus MW2

    Staphylococcus aureus subsp. aureus MW2

    • Public DB hit
      GI:21283688
      NP_646776
      1 of 2 hits reported for Staphylococcus aureus subsp. aureus MW2.
    • Hit length
      44 aa
    • E Value
      9.41E-5
    • BLAST Score
      50.8 bits
    • Similarity
      96.15%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_646776
      59.09% cov
    • Alignment Length
      26 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:237640367
      2KAM_A
    • Hit length
      26 aa
    • E Value
      1.67E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      96.15%
    • Alignment (schematic)

      SEQ ID NO 1
      96.15% cov
      2KAM_A
      96.15% cov
    • Alignment Length
      25 aa
  • Staphylococcus epidermidis

    Staphylococcus epidermidis

    • Public DB hit
      GI:3320007
      CAA89192
      1 of 2 hits reported for Staphylococcus epidermidis.
    • Hit length
      26 aa
    • E Value
      2.15E-3
    • BLAST Score
      46.6 bits
    • Similarity
      92%
    • Coverage
      96.15%
    • Alignment (schematic)

      SEQ ID NO 1
      96.15% cov
      CAA89192
      96.15% cov
    • Alignment Length
      25 aa
  • Staphylococcus epidermidis ATCC 12228

    Staphylococcus epidermidis ATCC 12228

    • Public DB hit
      GI:27468552
      NP_765189
    • Hit length
      25 aa
    • E Value
      2.21E-3
    • BLAST Score
      46.6 bits
    • Similarity
      92%
    • Coverage
      96.15%
    • Alignment (schematic)

      SEQ ID NO 1
      96.15% cov
      NP_765189
      100% cov
    • Alignment Length
      25 aa
  • Staphylococcus warneri

    Staphylococcus warneri

    • Public DB hit
      GI:3687337
      CAA11544
      1 of 2 hits reported for Staphylococcus warneri.
    • Hit length
      25 aa
    • E Value
      4.48E-2
    • BLAST Score
      42 bits
    • Similarity
      84%
    • Coverage
      96.15%
    • Alignment (schematic)

      SEQ ID NO 1
      96.15% cov
      CAA11544
      100% cov
    • Alignment Length
      25 aa
  • Staphylococcus simulans

    Staphylococcus simulans

    • Public DB hit
      GI:3687334
      CAA11542
    • Hit length
      26 aa
    • E Value
      9.35E-1
    • BLAST Score
      37.7 bits
    • Similarity
      80.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CAA11542
      100% cov
    • Alignment Length
      26 aa
Occurrence
74 times in PatSeqDB
Tools
SEQ ID NO
2
Length
26
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
Occurrence
8 times in PatSeqDB
Tools
SEQ ID NO
3
Length
26
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
Occurrence
8 times in PatSeqDB
Tools
SEQ ID NO
4
Length
26
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
Occurrence
8 times in PatSeqDB
Tools
SEQ ID NO
5
Length
26
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
Occurrence
8 times in PatSeqDB
Tools
SEQ ID NO
6
Length
22
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Staphylococcus aureus
Determined organism
  • Staphylococcus aureus O11

    Staphylococcus aureus O11

    • Public DB hit
      GI:323439248
      EGA96974
    • Hit length
      28 aa
    • E Value
      1.22E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EGA96974
      78.57% cov
    • Alignment Length
      22 aa
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus USA300_TCH1516

    Staphylococcus aureus subsp. aureus USA300_TCH1516

    • Public DB hit
      GI:205829845
      P0C814
    • Hit length
      22 aa
    • E Value
      1.61E-2
    • BLAST Score
      43.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      P0C814
      100% cov
    • Alignment Length
      22 aa
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus MRSA252

    Staphylococcus aureus subsp. aureus MRSA252

    • Public DB hit
      GI:206557894
      P0C812
    • Hit length
      22 aa
    • E Value
      6.31E-2
    • BLAST Score
      41.6 bits
    • Similarity
      100%
    • Coverage
      95.45%
    • Alignment (schematic)

      SEQ ID NO 6
      95.45% cov
      P0C812
      95.45% cov
    • Alignment Length
      21 aa
    • CIGAR string
      21M1H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
55 times in PatSeqDB
Tools
SEQ ID NO
7
Length
22
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
  • Staphylococcus aureus O11

    Staphylococcus aureus O11

    • Public DB hit
      GI:323439248
      EGA96974
    • Hit length
      28 aa
    • E Value
      4.16E-2
    • BLAST Score
      42 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EGA96974
      78.57% cov
    • Alignment Length
      22 aa
    • CIGAR string
      13MN8M mismatches: 1 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus USA300_TCH1516

    Staphylococcus aureus subsp. aureus USA300_TCH1516

    • Public DB hit
      GI:205829845
      P0C814
    • Hit length
      22 aa
    • E Value
      4.96E-2
    • BLAST Score
      42 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      P0C814
      100% cov
    • Alignment Length
      22 aa
    • CIGAR string
      13MN8M mismatches: 1 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus MRSA252

    Staphylococcus aureus subsp. aureus MRSA252

    • Public DB hit
      GI:206557894
      P0C812
    • Hit length
      22 aa
    • E Value
      1.95E-1
    • BLAST Score
      39.7 bits
    • Similarity
      95.24%
    • Coverage
      95.45%
    • Alignment (schematic)

      SEQ ID NO 7
      95.45% cov
      P0C812
      95.45% cov
    • Alignment Length
      21 aa
    • CIGAR string
      13MN7M1H mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
10 times in PatSeqDB
Tools
SEQ ID NO
8
Length
22
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
Occurrence
8 times in PatSeqDB
Tools
SEQ ID NO
9
Length
22
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
Occurrence
8 times in PatSeqDB
Tools
SEQ ID NO
10
Length
22
Sequence Type
peptide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
Occurrence
8 times in PatSeqDB
Tools

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