Cytokine Receptor Zalpha11

  • Published: Sep 30, 2009
  • Earliest Priority: Sep 23 1998
  • Family: 35
  • Cited Works: 186
  • Cited by: 0
  • Cites: 46
  • Sequences: 91
  • Additional Info: Cited Works
Data obtained from: EMBL-EBI Pat DDBJ Pat
91 sequences found in this patent (in total)

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Download sequences in fasta format: 9 peptides 82 DNAs

Displaying 71 - 80 of 91 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
71
Length
23
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:254826720
      NM_021887
      1 of 14 hits reported for Mus musculus.
    • Hit length
      2,607 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 71
      100% cov
      NM_021887
      0.88% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Monosiga brevicollis MX1

    Monosiga brevicollis MX1

    • Public DB hit
      GI:167526534
      XM_001747549
    • Hit length
      1,490 bp
    • E Value
      8.28E0
    • BLAST Score
      34.2 bits
    • Similarity
      95.24%
    • Coverage
      91.3%
    • Alignment (schematic)

      SEQ ID NO 71
      91.3% cov
      XM_001747549
      1.41% cov
    • Alignment Length
      21 bp
Occurrence
31 times in PatSeqDB
Tools
SEQ ID NO
72
Length
23
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:254826720
      NM_021887
      1 of 14 hits reported for Mus musculus.
    • Hit length
      2,607 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 72
      100% cov
      NM_021887
      0.88% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:60223062
      NM_001012469
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      2,426 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 72
      100% cov
      NM_001012469
      0.95% cov
    • Alignment Length
      23 bp
Occurrence
31 times in PatSeqDB
Tools
SEQ ID NO
73
Length
27
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Phalacrocorax carbo

    Phalacrocorax carbo

    • Public DB hit
      GI:121309838
      AB264540
    • Hit length
      2,484 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AB264540
      1.09% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Bombyx mori

    Bombyx mori

    • Public DB hit
      GI:118496041
      AB284983
    • Hit length
      1,510 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AB284983
      1.79% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Haematobia irritans irritans

    Haematobia irritans irritans

    • Public DB hit
      GI:31377444
      AF034643
    • Hit length
      1,521 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AF034643
      1.78% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:63852091
      AB182999
    • Hit length
      1,373 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AB182999
      1.97% cov
    • Alignment Length
      27 bp
  • Anguilla japonica

    Anguilla japonica

    • Public DB hit
      GI:63852079
      AB182645
    • Hit length
      1,398 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AB182645
      1.93% cov
    • Alignment Length
      27 bp
  • Aspergillus oryzae

    Aspergillus oryzae

    • Public DB hit
      GI:57157149
      AB070845
    • Hit length
      3,392 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AB070845
      0.8% cov
    • Alignment Length
      27 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:57157103
      AB032017
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      2,740 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AB032017
      0.99% cov
    • Alignment Length
      27 bp
  • Marsupenaeus japonicus

    Marsupenaeus japonicus

    • Public DB hit
      GI:37196921
      AB121211
      1 of 3 hits reported for Marsupenaeus japonicus.
    • Hit length
      3,176 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AB121211
      0.85% cov
    • Alignment Length
      27 bp
  • Petunia x hybrida

    Petunia x hybrida

    • Public DB hit
      GI:34393751
      AB098525
    • Hit length
      2,786 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AB098525
      0.97% cov
    • Alignment Length
      27 bp
  • Fucus vesiculosus

    Fucus vesiculosus

    • Public DB hit
      GI:13560097
      AJ310908
    • Hit length
      1,530 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AJ310908
      1.76% cov
    • Alignment Length
      27 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:12034658
      AF222713
    • Hit length
      4,288 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AF222713
      0.63% cov
    • Alignment Length
      27 bp
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:9187882
      AJ272202
    • Hit length
      2,452 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AJ272202
      1.1% cov
    • Alignment Length
      27 bp
  • Phascolion strombus

    Phascolion strombus

    • Public DB hit
      GI:4468654
      AJ004937
    • Hit length
      2,274 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AJ004937
      1.19% cov
    • Alignment Length
      27 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:3355756
      AJ009799
    • Hit length
      4,018 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AJ009799
      0.67% cov
    • Alignment Length
      27 bp
  • Squalus acanthias

    Squalus acanthias

    • Public DB hit
      GI:3116065
      AJ223716
      1 of 3 hits reported for Squalus acanthias.
    • Hit length
      3,105 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AJ223716
      0.87% cov
    • Alignment Length
      27 bp
  • Malus domestica

    Malus domestica

    • Public DB hit
      GI:2924324
      Z93765
    • Hit length
      1,971 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      Z93765
      1.37% cov
    • Alignment Length
      27 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:1869966
      Y09827
    • Hit length
      5,915 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      Y09827
      0.46% cov
    • Alignment Length
      27 bp
  • Nicotiana tabacum

    Nicotiana tabacum

    • Public DB hit
      GI:1781296
      Y10472
    • Hit length
      1,616 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      Y10472
      1.67% cov
    • Alignment Length
      27 bp
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:20330085
      AJ306902
    • Hit length
      483 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 73
      100% cov
      AJ306902
      5.59% cov
    • Alignment Length
      27 bp
Occurrence
1227 times in PatSeqDB
Tools
SEQ ID NO
74
Length
22
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:254826720
      NM_021887
      1 of 14 hits reported for Mus musculus.
    • Hit length
      2,607 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 74
      100% cov
      NM_021887
      0.84% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Monosiga brevicollis MX1

    Monosiga brevicollis MX1

    • Public DB hit
      GI:167526534
      XM_001747549
    • Hit length
      1,490 bp
    • E Value
      6.21E0
    • BLAST Score
      34.2 bits
    • Similarity
      95.24%
    • Coverage
      95.45%
    • Alignment (schematic)

      SEQ ID NO 74
      95.45% cov
      XM_001747549
      1.41% cov
    • Alignment Length
      21 bp
Occurrence
31 times in PatSeqDB
Tools
SEQ ID NO
75
Length
23
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:254826720
      NM_021887
      1 of 14 hits reported for Mus musculus.
    • Hit length
      2,607 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 75
      100% cov
      NM_021887
      0.88% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:327199328
      AC243682
      1 of 10 hits reported for Rattus norvegicus.
    • Hit length
      185,698 bp
    • E Value
      3.4E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      91.3%
    • Alignment (schematic)

      SEQ ID NO 75
      91.3% cov
      AC243682
      0.01% cov
    • Alignment Length
      21 bp
Occurrence
31 times in PatSeqDB
Tools
SEQ ID NO
76
Length
23
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:331702904
      FR832872
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      2,415 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      FR832872
      0.95% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Amborella trichopoda

    Amborella trichopoda

    • Public DB hit
      GI:291196872
      FN263366
    • Hit length
      2,828 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      FN263366
      0.81% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryzias latipes

    Oryzias latipes

    • Public DB hit
      GI:254553051
      AB353140
    • Hit length
      2,611 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB353140
      0.88% cov
    • Alignment Length
      23 bp
  • Anguilla anguilla

    Anguilla anguilla

    • Public DB hit
      GI:219920734
      FM173264
    • Hit length
      3,937 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      FM173264
      0.58% cov
    • Alignment Length
      23 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:213385144
      AB218812
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      1,280 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB218812
      1.8% cov
    • Alignment Length
      23 bp
  • uncultured prokaryote

    uncultured prokaryote

    • Public DB hit
      GI:195550234
      EU923100
      1 of 2 hits reported for uncultured prokaryote.
    • Hit length
      328 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      EU923100
      7.01% cov
    • Alignment Length
      23 bp
  • Papilio xuthus

    Papilio xuthus

    • Public DB hit
      GI:183979248
      AB264711
    • Hit length
      3,121 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB264711
      0.74% cov
    • Alignment Length
      23 bp
  • Rousettus leschenaultii

    Rousettus leschenaultii

    • Public DB hit
      GI:157041184
      AB296066
    • Hit length
      1,262 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB296066
      1.82% cov
    • Alignment Length
      23 bp
  • Cucumis sativus

    Cucumis sativus

    • Public DB hit
      GI:156765916
      D89732
    • Hit length
      1,761 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      D89732
      1.31% cov
    • Alignment Length
      23 bp
  • Kryptolebias marmoratus

    Kryptolebias marmoratus

    • Public DB hit
      GI:114325207
      DQ423779
    • Hit length
      2,021 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      DQ423779
      1.14% cov
    • Alignment Length
      23 bp
  • Lethenteron camtschaticum

    Lethenteron camtschaticum

    • Public DB hit
      GI:148537260
      AB286673
    • Hit length
      716 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB286673
      3.21% cov
    • Alignment Length
      23 bp
  • Phalacrocorax carbo

    Phalacrocorax carbo

    • Public DB hit
      GI:121309838
      AB264540
    • Hit length
      2,484 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB264540
      0.93% cov
    • Alignment Length
      23 bp
  • Musa acuminata AAA Group

    Musa acuminata AAA Group

    • Public DB hit
      GI:121309567
      AB266318
    • Hit length
      2,320 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB266318
      0.99% cov
    • Alignment Length
      23 bp
  • Bombyx mori

    Bombyx mori

    • Public DB hit
      GI:118496041
      AB284983
    • Hit length
      1,510 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB284983
      1.52% cov
    • Alignment Length
      23 bp
  • Eublepharis macularius

    Eublepharis macularius

    • Public DB hit
      GI:87251941
      AB240529
    • Hit length
      2,028 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB240529
      1.13% cov
    • Alignment Length
      23 bp
  • Haematobia irritans irritans

    Haematobia irritans irritans

    • Public DB hit
      GI:31377444
      AF034643
    • Hit length
      1,521 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AF034643
      1.51% cov
    • Alignment Length
      23 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:63852091
      AB182999
    • Hit length
      1,373 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB182999
      1.68% cov
    • Alignment Length
      23 bp
  • Anguilla japonica

    Anguilla japonica

    • Public DB hit
      GI:63852079
      AB182645
    • Hit length
      1,398 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB182645
      1.65% cov
    • Alignment Length
      23 bp
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:62149357
      AB194775
    • Hit length
      7,092 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB194775
      0.32% cov
    • Alignment Length
      23 bp
  • Daucus carota

    Daucus carota

    • Public DB hit
      GI:16444921
      AB057371
    • Hit length
      660 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 76
      100% cov
      AB057371
      3.48% cov
    • Alignment Length
      23 bp
Occurrence
806 times in PatSeqDB
Tools
SEQ ID NO
77
Length
23
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:254826720
      NM_021887
      1 of 16 hits reported for Mus musculus.
    • Hit length
      2,607 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 77
      100% cov
      NM_021887
      0.88% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
31 times in PatSeqDB
Tools
SEQ ID NO
78
Length
592
Sequence Type
DNA
Locations
Fulltext
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:254826720
      NM_021887
      1 of 10 hits reported for Mus musculus.
    • Hit length
      2,607 bp
    • E Value
      0E0
    • BLAST Score
      1,050 bits
    • Similarity
      99.31%
    • Coverage
      97.8%
    • Alignment (schematic)

      SEQ ID NO 78
      97.8% cov
      NM_021887
      22.21% cov
    • Alignment Length
      579 bp
    • CIGAR string
      13H29MN359MN4MN91MN92M mismatches: 4 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:298887347
      FQ226709
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      2,285 bp
    • E Value
      1.03E-176
    • BLAST Score
      629 bits
    • Similarity
      87.99%
    • Coverage
      90.2%
    • Alignment (schematic)

      SEQ ID NO 78
      90.2% cov
      FQ226709
      23.37% cov
    • Alignment Length
      541 bp
Occurrence
31 times in PatSeqDB
Tools
SEQ ID NO
79
Length
52
Sequence Type
peptide
Locations
Fulltext
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:34785554
      AAH57861
      1 of 5 hits reported for Mus musculus.
    • Hit length
      268 aa
    • E Value
      1.99E-21
    • BLAST Score
      106.3 bits
    • Similarity
      98.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 79
      100% cov
      AAH57861
      19.4% cov
    • Alignment Length
      52 aa
    • CIGAR string
      21MN30M mismatches: 1 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:60223063
      NP_001012487
    • Hit length
      521 aa
    • E Value
      4.76E-14
    • BLAST Score
      82 bits
    • Similarity
      88.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 79
      100% cov
      NP_001012487
      9.98% cov
    • Alignment Length
      52 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301782449
      XP_002926640
    • Hit length
      545 aa
    • E Value
      1.97E-10
    • BLAST Score
      69.7 bits
    • Similarity
      76.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 79
      100% cov
      XP_002926640
      9.54% cov
    • Alignment Length
      52 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311251367
      XP_003124575
    • Hit length
      538 aa
    • E Value
      2.25E-5
    • BLAST Score
      53.1 bits
    • Similarity
      76.32%
    • Coverage
      73.08%
    • Alignment (schematic)

      SEQ ID NO 79
      73.08% cov
      XP_003124575
      7.06% cov
    • Alignment Length
      38 aa
Occurrence
32 times in PatSeqDB
Tools
SEQ ID NO
80
Length
1,229
Sequence Type
DNA
Locations
Fulltext
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:254826720
      NM_021887
      1 of 14 hits reported for Mus musculus.
    • Hit length
      2,607 bp
    • E Value
      0E0
    • BLAST Score
      2,248.5 bits
    • Similarity
      99.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 80
      100% cov
      NM_021887
      47.14% cov
    • Alignment Length
      1,229 bp
    • CIGAR string
      58MN144MN72MN170MN781M mismatches: 4 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:298887347
      FQ226709
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      2,285 bp
    • E Value
      0E0
    • BLAST Score
      1,701.9 bits
    • Similarity
      92.03%
    • Coverage
      99.92%
    • Alignment (schematic)

      SEQ ID NO 80
      99.92% cov
      FQ226709
      52.65% cov
    • Alignment Length
      1,230 bp
Occurrence
29 times in PatSeqDB
Tools

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