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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
151 sequences found in this patent (in total)

Displaying 1 - 10 of 151 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
43
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
2110 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
41
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
2105 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
2,290
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:37181667
      AY358274
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      2,290 bp
    • E Value
      0E0
    • BLAST Score
      4,229.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AY358274
      100% cov
    • Alignment Length
      2,290 bp
    • CIGAR string
      2290M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114626736
      XM_520266
    • Hit length
      3,614 bp
    • E Value
      0E0
    • BLAST Score
      4,163.5 bits
    • Similarity
      99.52%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 3
      99.87% cov
      XM_520266
      63.28% cov
    • Alignment Length
      2,287 bp
    • CIGAR string
      411MN156MN8MN15MN239MN113MN26MN45MN91MN910MN125MN137M3H mismatches: 11 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297685383
      XM_002820224
    • Hit length
      3,366 bp
    • E Value
      0E0
    • BLAST Score
      4,043.4 bits
    • Similarity
      98.6%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 3
      99.87% cov
      XM_002820224
      67.86% cov
    • Alignment Length
      2,288 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332230058
      XM_003264156
    • Hit length
      3,616 bp
    • E Value
      0E0
    • BLAST Score
      4,019.4 bits
    • Similarity
      98.38%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 3
      99.87% cov
      XM_003264156
      63.25% cov
    • Alignment Length
      2,287 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296190851
      XM_002743327
    • Hit length
      2,250 bp
    • E Value
      0E0
    • BLAST Score
      2,961.3 bits
    • Similarity
      95.9%
    • Coverage
      79.83%
    • Alignment (schematic)

      SEQ ID NO 3
      79.83% cov
      XM_002743327
      81.29% cov
    • Alignment Length
      1,830 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194225840
      XM_001501670
    • Hit length
      3,542 bp
    • E Value
      0E0
    • BLAST Score
      2,804.3 bits
    • Similarity
      89.8%
    • Coverage
      95.5%
    • Alignment (schematic)

      SEQ ID NO 3
      95.5% cov
      XM_001501670
      62.45% cov
    • Alignment Length
      2,226 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312152531
      HQ448298
    • Hit length
      1,581 bp
    • E Value
      0E0
    • BLAST Score
      2,737.9 bits
    • Similarity
      100%
    • Coverage
      64.72%
    • Alignment (schematic)

      SEQ ID NO 3
      64.72% cov
      HQ448298
      93.74% cov
    • Alignment Length
      1,482 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73968022
      XM_537840
    • Hit length
      2,345 bp
    • E Value
      0E0
    • BLAST Score
      2,486.7 bits
    • Similarity
      88.36%
    • Coverage
      90.57%
    • Alignment (schematic)

      SEQ ID NO 3
      90.57% cov
      XM_537840
      88.78% cov
    • Alignment Length
      2,097 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:158262678
      NM_001109946
    • Hit length
      1,991 bp
    • E Value
      0E0
    • BLAST Score
      2,318.7 bits
    • Similarity
      90.59%
    • Coverage
      77.21%
    • Alignment (schematic)

      SEQ ID NO 3
      77.21% cov
      NM_001109946
      87.64% cov
    • Alignment Length
      1,774 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301761905
      XM_002916324
    • Hit length
      1,634 bp
    • E Value
      0E0
    • BLAST Score
      2,218.9 bits
    • Similarity
      91.17%
    • Coverage
      71.97%
    • Alignment (schematic)

      SEQ ID NO 3
      71.97% cov
      XM_002916324
      99.51% cov
    • Alignment Length
      1,654 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:141803564
      NM_011923
    • Hit length
      3,444 bp
    • E Value
      0E0
    • BLAST Score
      2,170.9 bits
    • Similarity
      86.45%
    • Coverage
      87.42%
    • Alignment (schematic)

      SEQ ID NO 3
      87.42% cov
      NM_011923
      58.39% cov
    • Alignment Length
      2,044 bp
Occurrence
714 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
493
Type
peptide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:6912236
      NP_036230
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      493 aa
    • E Value
      0E0
    • BLAST Score
      1,034.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_036230
      100% cov
    • Alignment Length
      493 aa
    • CIGAR string
      493M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332230059
      XP_003264204
    • Hit length
      493 aa
    • E Value
      0E0
    • BLAST Score
      1,031.6 bits
    • Similarity
      99.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003264204
      100% cov
    • Alignment Length
      493 aa
    • CIGAR string
      12MN6MN188MN284M mismatches: 3 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114626737
      XP_520266
    • Hit length
      493 aa
    • E Value
      0E0
    • BLAST Score
      1,028.1 bits
    • Similarity
      99.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_520266
      100% cov
    • Alignment Length
      493 aa
    • CIGAR string
      16MN2MN147MN325M mismatches: 3 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:149038973
      EDL93193
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      493 aa
    • E Value
      0E0
    • BLAST Score
      936 bits
    • Similarity
      96.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EDL93193
      100% cov
    • Alignment Length
      493 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:157954420
      NP_001103284
    • Hit length
      493 aa
    • E Value
      0E0
    • BLAST Score
      935.3 bits
    • Similarity
      98.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001103284
      100% cov
    • Alignment Length
      493 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:158262679
      NP_001103416
    • Hit length
      493 aa
    • E Value
      0E0
    • BLAST Score
      934.1 bits
    • Similarity
      98.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001103416
      100% cov
    • Alignment Length
      493 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:31560520
      NP_036053
      1 of 2 hits reported for Mus musculus.
    • Hit length
      493 aa
    • E Value
      0E0
    • BLAST Score
      929.5 bits
    • Similarity
      96.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_036053
      100% cov
    • Alignment Length
      493 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149738036
      XP_001501720
    • Hit length
      494 aa
    • E Value
      0E0
    • BLAST Score
      927.5 bits
    • Similarity
      96.56%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001501720
      100% cov
    • Alignment Length
      494 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73968023
      XP_537840
    • Hit length
      493 aa
    • E Value
      0E0
    • BLAST Score
      927.2 bits
    • Similarity
      97.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_537840
      100% cov
    • Alignment Length
      493 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296190852
      XP_002743373
    • Hit length
      582 aa
    • E Value
      0E0
    • BLAST Score
      921.8 bits
    • Similarity
      98.88%
    • Coverage
      90.87%
    • Alignment (schematic)

      SEQ ID NO 4
      90.87% cov
      XP_002743373
      76.98% cov
    • Alignment Length
      448 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291408319
      XP_002720461
    • Hit length
      493 aa
    • E Value
      0E0
    • BLAST Score
      913.7 bits
    • Similarity
      97.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002720461
      100% cov
    • Alignment Length
      493 aa
Occurrence
872 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
33
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332230058
      XM_003264156
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,616 bp
    • E Value
      7.61E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003264156
      0.91% cov
    • Alignment Length
      33 bp
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:157954413
      NM_001109811
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      2,852 bp
    • E Value
      7.61E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_001109811
      1.16% cov
    • Alignment Length
      33 bp
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114626736
      XM_520266
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,614 bp
    • E Value
      7.61E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_520266
      0.91% cov
    • Alignment Length
      33 bp
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:34577067
      NM_012098
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      3,572 bp
    • E Value
      7.61E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_012098
      0.92% cov
    • Alignment Length
      33 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312152531
      HQ448298
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,581 bp
    • E Value
      7.61E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      HQ448298
      2.09% cov
    • Alignment Length
      33 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296190851
      XM_002743327
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,250 bp
    • E Value
      1.86E-6
    • BLAST Score
      58 bits
    • Similarity
      96.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002743327
      1.47% cov
    • Alignment Length
      33 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:158262678
      NM_001109946
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      1,991 bp
    • E Value
      1.86E-6
    • BLAST Score
      58 bits
    • Similarity
      96.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_001109946
      1.66% cov
    • Alignment Length
      33 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:141803564
      NM_011923
      1 of 4 hits reported for Mus musculus.
    • Hit length
      3,444 bp
    • E Value
      1.86E-6
    • BLAST Score
      58 bits
    • Similarity
      96.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_011923
      0.96% cov
    • Alignment Length
      33 bp
Occurrence
66 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
41
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297685383
      XM_002820224
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,366 bp
    • E Value
      2.07E-13
    • BLAST Score
      81.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002820224
      1.22% cov
    • Alignment Length
      41 bp
    • CIGAR string
      41M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:157954413
      NM_001109811
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      2,852 bp
    • E Value
      2.07E-13
    • BLAST Score
      81.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001109811
      1.44% cov
    • Alignment Length
      41 bp
    • CIGAR string
      41M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114626736
      XM_520266
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,614 bp
    • E Value
      2.07E-13
    • BLAST Score
      81.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_520266
      1.13% cov
    • Alignment Length
      41 bp
    • CIGAR string
      41M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:34577067
      NM_012098
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      3,572 bp
    • E Value
      2.07E-13
    • BLAST Score
      81.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_012098
      1.15% cov
    • Alignment Length
      41 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312152531
      HQ448298
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,581 bp
    • E Value
      2.07E-13
    • BLAST Score
      81.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      HQ448298
      2.59% cov
    • Alignment Length
      41 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332230058
      XM_003264156
    • Hit length
      3,616 bp
    • E Value
      5.05E-11
    • BLAST Score
      73.8 bits
    • Similarity
      97.56%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003264156
      1.13% cov
    • Alignment Length
      41 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296190851
      XM_002743327
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,250 bp
    • E Value
      1.23E-8
    • BLAST Score
      65.9 bits
    • Similarity
      95.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002743327
      1.82% cov
    • Alignment Length
      41 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291408318
      XM_002720415
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      1,482 bp
    • E Value
      1.23E-8
    • BLAST Score
      65.9 bits
    • Similarity
      95.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002720415
      2.77% cov
    • Alignment Length
      41 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194225840
      XM_001501670
    • Hit length
      3,542 bp
    • E Value
      1.23E-8
    • BLAST Score
      65.9 bits
    • Similarity
      95.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001501670
      1.16% cov
    • Alignment Length
      41 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:158262678
      NM_001109946
    • Hit length
      1,991 bp
    • E Value
      1.23E-8
    • BLAST Score
      65.9 bits
    • Similarity
      95.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001109946
      2.06% cov
    • Alignment Length
      41 bp
Occurrence
66 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
33
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114626736
      XM_520266
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,614 bp
    • E Value
      7.61E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_520266
      0.91% cov
    • Alignment Length
      33 bp
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:34577067
      NM_012098
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      3,572 bp
    • E Value
      7.61E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_012098
      0.92% cov
    • Alignment Length
      33 bp
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312152531
      HQ448298
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,581 bp
    • E Value
      7.61E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      HQ448298
      2.09% cov
    • Alignment Length
      33 bp
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332230058
      XM_003264156
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,616 bp
    • E Value
      1.86E-6
    • BLAST Score
      58 bits
    • Similarity
      96.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003264156
      0.91% cov
    • Alignment Length
      33 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297685383
      XM_002820224
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,366 bp
    • E Value
      1.86E-6
    • BLAST Score
      58 bits
    • Similarity
      96.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002820224
      0.98% cov
    • Alignment Length
      33 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296190851
      XM_002743327
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,250 bp
    • E Value
      1.86E-6
    • BLAST Score
      58 bits
    • Similarity
      96.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002743327
      1.47% cov
    • Alignment Length
      33 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:157954413
      NM_001109811
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      2,852 bp
    • E Value
      1.86E-6
    • BLAST Score
      58 bits
    • Similarity
      96.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001109811
      1.16% cov
    • Alignment Length
      33 bp
Occurrence
66 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
1,218
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:37182218
      AY358548
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      1,218 bp
    • E Value
      0E0
    • BLAST Score
      2,250.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AY358548
      100% cov
    • Alignment Length
      1,218 bp
    • CIGAR string
      1218M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:74141717
      AK166167
      1 of 2 hits reported for Mus musculus.
    • Hit length
      3,092 bp
    • E Value
      0E0
    • BLAST Score
      1,002 bits
    • Similarity
      82.63%
    • Coverage
      96.63%
    • Alignment (schematic)

      SEQ ID NO 8
      96.63% cov
      AK166167
      37.58% cov
    • Alignment Length
      1,203 bp
Occurrence
182 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
117
Type
peptide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:193786558
      BAG51341
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      576 aa
    • E Value
      1.85E-62
    • BLAST Score
      242.7 bits
    • Similarity
      99.15%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      BAG51341
      20.31% cov
    • Alignment Length
      117 aa
    • CIGAR string
      116MN mismatches: 1 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097860
      NP_001126179
    • Hit length
      576 aa
    • E Value
      7.16E-62
    • BLAST Score
      240.7 bits
    • Similarity
      98.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_001126179
      20.31% cov
    • Alignment Length
      117 aa
    • CIGAR string
      36MN79MN mismatches: 2 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227918
      XP_003263140
    • Hit length
      576 aa
    • E Value
      4.06E-61
    • BLAST Score
      238.4 bits
    • Similarity
      97.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_003263140
      20.31% cov
    • Alignment Length
      117 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297284088
      XP_001096448
    • Hit length
      535 aa
    • E Value
      7.1E-61
    • BLAST Score
      237.3 bits
    • Similarity
      97.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_001096448
      21.87% cov
    • Alignment Length
      117 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:149032444
      EDL87335
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      576 aa
    • E Value
      3.54E-51
    • BLAST Score
      205.3 bits
    • Similarity
      93.16%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      EDL87335
      20.31% cov
    • Alignment Length
      117 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296231170
      XP_002761046
    • Hit length
      576 aa
    • E Value
      1.5E-49
    • BLAST Score
      199.9 bits
    • Similarity
      97.41%
    • Coverage
      99.15%
    • Alignment (schematic)

      SEQ ID NO 9
      99.15% cov
      XP_002761046
      20.14% cov
    • Alignment Length
      116 aa
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:75048744
      Q95LP3
    • Hit length
      576 aa
    • E Value
      2.01E-49
    • BLAST Score
      199.5 bits
    • Similarity
      97.41%
    • Coverage
      99.15%
    • Alignment (schematic)

      SEQ ID NO 9
      99.15% cov
      Q95LP3
      20.14% cov
    • Alignment Length
      116 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301752924
      XP_002912305
    • Hit length
      576 aa
    • E Value
      2.13E-47
    • BLAST Score
      192.6 bits
    • Similarity
      94.83%
    • Coverage
      99.15%
    • Alignment (schematic)

      SEQ ID NO 9
      99.15% cov
      XP_002912305
      20.14% cov
    • Alignment Length
      116 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311257229
      XP_003127018
    • Hit length
      576 aa
    • E Value
      3.12E-47
    • BLAST Score
      192.2 bits
    • Similarity
      95.69%
    • Coverage
      99.15%
    • Alignment (schematic)

      SEQ ID NO 9
      99.15% cov
      XP_003127018
      20.14% cov
    • Alignment Length
      116 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:74141718
      BAE38607
    • Hit length
      117 aa
    • E Value
      9.96E-47
    • BLAST Score
      190.3 bits
    • Similarity
      94.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      BAE38607
      100% cov
    • Alignment Length
      117 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291390178
      XP_002711584
    • Hit length
      576 aa
    • E Value
      1.25E-46
    • BLAST Score
      190.3 bits
    • Similarity
      94.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002711584
      20.31% cov
    • Alignment Length
      117 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73949786
      XP_850920
    • Hit length
      576 aa
    • E Value
      1.71E-46
    • BLAST Score
      189.5 bits
    • Similarity
      94.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_850920
      20.31% cov
    • Alignment Length
      117 aa
Occurrence
185 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
1,231
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:158260942
      AK289960
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      1,397 bp
    • E Value
      0E0
    • BLAST Score
      2,246.6 bits
    • Similarity
      99.92%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 10
      99.03% cov
      AK289960
      87.26% cov
    • Alignment Length
      1,219 bp
    • CIGAR string
      12H151MN1067M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332861768
      XM_001138460
    • Hit length
      2,691 bp
    • E Value
      0E0
    • BLAST Score
      2,241.1 bits
    • Similarity
      99.84%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 10
      99.03% cov
      XM_001138460
      45.3% cov
    • Alignment Length
      1,219 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297304901
      XM_001084335
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      2,726 bp
    • E Value
      0E0
    • BLAST Score
      2,169.1 bits
    • Similarity
      98.77%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 10
      99.03% cov
      XM_001084335
      44.72% cov
    • Alignment Length
      1,219 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296236555
      XM_002807918
    • Hit length
      2,659 bp
    • E Value
      0E0
    • BLAST Score
      2,089.7 bits
    • Similarity
      97.62%
    • Coverage
      98.94%
    • Alignment (schematic)

      SEQ ID NO 10
      98.94% cov
      XM_002807918
      45.81% cov
    • Alignment Length
      1,221 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194228336
      XM_001915813
    • Hit length
      2,657 bp
    • E Value
      0E0
    • BLAST Score
      1,895.8 bits
    • Similarity
      94.76%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 10
      99.03% cov
      XM_001915813
      45.84% cov
    • Alignment Length
      1,222 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90077475
      AB171355
    • Hit length
      1,725 bp
    • E Value
      0E0
    • BLAST Score
      1,749.9 bits
    • Similarity
      98.58%
    • Coverage
      80.34%
    • Alignment (schematic)

      SEQ ID NO 10
      80.34% cov
      AB171355
      57.33% cov
    • Alignment Length
      989 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:149642760
      NM_001098892
    • Hit length
      2,366 bp
    • E Value
      0E0
    • BLAST Score
      1,718.5 bits
    • Similarity
      92.79%
    • Coverage
      96.43%
    • Alignment (schematic)

      SEQ ID NO 10
      96.43% cov
      NM_001098892
      50.3% cov
    • Alignment Length
      1,193 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:207080069
      NM_001135296
    • Hit length
      2,041 bp
    • E Value
      0E0
    • BLAST Score
      1,692.7 bits
    • Similarity
      99.25%
    • Coverage
      76.12%
    • Alignment (schematic)

      SEQ ID NO 10
      76.12% cov
      NM_001135296
      45.91% cov
    • Alignment Length
      937 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:31542808
      NM_010200
    • Hit length
      2,506 bp
    • E Value
      0E0
    • BLAST Score
      1,644.6 bits
    • Similarity
      91.25%
    • Coverage
      98.46%
    • Alignment (schematic)

      SEQ ID NO 10
      98.46% cov
      NM_010200
      48.28% cov
    • Alignment Length
      1,223 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74008558
      XM_549294
    • Hit length
      2,377 bp
    • E Value
      0E0
    • BLAST Score
      1,622.5 bits
    • Similarity
      90.83%
    • Coverage
      98.78%
    • Alignment (schematic)

      SEQ ID NO 10
      98.78% cov
      XM_549294
      51.03% cov
    • Alignment Length
      1,222 bp
Occurrence
797 times in PatSeqDB
Tools
PatSeq Finder

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