Cytoplasmic Hybrid Plant Belonging To The Genus Lactuca And Method For Production Thereof

  • Published: Jul 30, 2008
  • Earliest Priority: Oct 26 2005
  • Family: 19
  • Cited Works: 0
  • Cited by: 4
  • Cites: 0
  • Sequences: 18
  • Additional Info:
Data obtained from: EPO Sequence Listings
18 sequences found in this patent (in total)

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Download sequences in fasta format: 18 DNAs

Displaying 11 - 18 of 18 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
11
Length
22
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Helianthus annuus

    Helianthus annuus

    • Public DB hit
      GI:1403507
      X98362
    • Hit length
      1,583 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      X98362
      1.39% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Helianthus petiolaris

    Helianthus petiolaris

    • Public DB hit
      GI:515775
      Z35295
    • Hit length
      1,741 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      Z35295
      1.26% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
9 times in PatSeqDB
Tools
SEQ ID NO
12
Length
21
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224142793
      XM_002335925
      1 of 3 hits reported for Populus trichocarpa.
    • Hit length
      1,182 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 12
      100% cov
      XM_002335925
      1.78% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:30678491
      NM_126762
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      1,467 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 12
      100% cov
      NM_126762
      1.43% cov
    • Alignment Length
      21 bp
  • Beta vulgaris subsp. maritima

    Beta vulgaris subsp. maritima

    • Public DB hit
      GI:320148698
      FP885876
      1 of 3 hits reported for Beta vulgaris subsp. maritima.
    • Hit length
      72,121 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 12
      100% cov
      FP885876
      0.03% cov
    • Alignment Length
      21 bp
  • Hibiscus cannabinus

    Hibiscus cannabinus

    • Public DB hit
      GI:310757471
      HM535787
      1 of 2 hits reported for Hibiscus cannabinus.
    • Hit length
      1,179 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 12
      100% cov
      HM535787
      1.78% cov
    • Alignment Length
      21 bp
  • Silene latifolia

    Silene latifolia

    • Public DB hit
      GI:301338014
      HM562727
      1 of 2 hits reported for Silene latifolia.
    • Hit length
      253,413 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 12
      100% cov
      HM562727
      0.01% cov
    • Alignment Length
      21 bp
  • Silene noctiflora

    Silene noctiflora

    • Public DB hit
      GI:296040670
      HM099790
    • Hit length
      1,170 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 12
      100% cov
      HM099790
      1.79% cov
    • Alignment Length
      21 bp
  • Gypsophila repens

    Gypsophila repens

    • Public DB hit
      GI:215400908
      EU883282
    • Hit length
      1,041 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 12
      100% cov
      EU883282
      2.02% cov
    • Alignment Length
      21 bp
  • Silene nutans

    Silene nutans

    • Public DB hit
      GI:215400904
      EU883280
      1 of 11 hits reported for Silene nutans.
    • Hit length
      1,041 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 12
      100% cov
      EU883280
      2.02% cov
    • Alignment Length
      21 bp
Occurrence
9 times in PatSeqDB
Tools
SEQ ID NO
13
Length
20
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Vigna radiata

    Vigna radiata

    • Public DB hit
      GI:308206734
      HM367685
    • Hit length
      401,262 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      HM367685
      0% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Beta vulgaris subsp. maritima

    Beta vulgaris subsp. maritima

    • Public DB hit
      GI:320148698
      FP885876
      1 of 3 hits reported for Beta vulgaris subsp. maritima.
    • Hit length
      72,121 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      FP885876
      0.03% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Lotus japonicus

    Lotus japonicus

    • Public DB hit
      GI:292744447
      AK336843
    • Hit length
      1,151 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      AK336843
      1.74% cov
    • Alignment Length
      20 bp
  • Cucurbita pepo

    Cucurbita pepo

    • Public DB hit
      GI:259156800
      GQ856148
    • Hit length
      982,833 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      GQ856148
      0% cov
    • Alignment Length
      20 bp
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:239764757
      GQ220325
      1 of 3 hits reported for Vitis vinifera.
    • Hit length
      202,122 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      GQ220325
      0.01% cov
    • Alignment Length
      20 bp
  • Medicago truncatula

    Medicago truncatula

    • Public DB hit
      GI:223556040
      AC144406
    • Hit length
      78,597 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      AC144406
      0.03% cov
    • Alignment Length
      20 bp
  • Carica papaya

    Carica papaya

    • Public DB hit
      GI:170522360
      EU431224
    • Hit length
      476,890 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      EU431224
      0% cov
    • Alignment Length
      20 bp
  • Beta vulgaris subsp. vulgaris

    Beta vulgaris subsp. vulgaris

    • Public DB hit
      GI:87248049
      DQ381462
      1 of 3 hits reported for Beta vulgaris subsp. vulgaris.
    • Hit length
      1,682 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      DQ381462
      1.19% cov
    • Alignment Length
      20 bp
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:49256807
      Y08501
    • Hit length
      366,924 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      Y08501
      0.01% cov
    • Alignment Length
      20 bp
  • Brassica napus

    Brassica napus

    • Public DB hit
      GI:37591045
      AP006444
      1 of 3 hits reported for Brassica napus.
    • Hit length
      221,853 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      AP006444
      0.01% cov
    • Alignment Length
      20 bp
  • Magnolia x soulangeana

    Magnolia x soulangeana

    • Public DB hit
      GI:25987148
      AF319171
    • Hit length
      4,180 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      AF319171
      0.48% cov
    • Alignment Length
      20 bp
  • Helianthus annuus

    Helianthus annuus

    • Public DB hit
      GI:25987145
      AF319170
    • Hit length
      5,893 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      AF319170
      0.34% cov
    • Alignment Length
      20 bp
  • Oenothera berteroana

    Oenothera berteroana

    • Public DB hit
      GI:12796
      X61030
      1 of 2 hits reported for Oenothera berteroana.
    • Hit length
      753 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 13
      100% cov
      X61030
      2.66% cov
    • Alignment Length
      20 bp
Occurrence
9 times in PatSeqDB
Tools
SEQ ID NO
14
Length
20
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Platanus occidentalis

    Platanus occidentalis

    • Public DB hit
      GI:302748964
      GU351777
    • Hit length
      1,449 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 14
      100% cov
      GU351777
      1.38% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Menyanthes trifoliata

    Menyanthes trifoliata

    • Public DB hit
      GI:302748876
      GU351733
    • Hit length
      1,476 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 14
      100% cov
      GU351733
      1.36% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Alseuosmia macrophylla

    Alseuosmia macrophylla

    • Public DB hit
      GI:302748532
      GU351559
    • Hit length
      1,293 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 14
      100% cov
      GU351559
      1.55% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Anthodiscus amazonicus

    Anthodiscus amazonicus

    • Public DB hit
      GI:288191117
      FJ669584
    • Hit length
      1,517 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 14
      100% cov
      FJ669584
      1.32% cov
    • Alignment Length
      20 bp
  • Elaeodendron orientale

    Elaeodendron orientale

    • Public DB hit
      GI:133907834
      EF135439
    • Hit length
      1,443 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 14
      100% cov
      EF135439
      1.39% cov
    • Alignment Length
      20 bp
  • Caryocar glabrum

    Caryocar glabrum

    • Public DB hit
      GI:133907810
      EF135427
    • Hit length
      1,442 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 14
      100% cov
      EF135427
      1.39% cov
    • Alignment Length
      20 bp
  • Helianthus annuus

    Helianthus annuus

    • Public DB hit
      GI:25987145
      AF319170
    • Hit length
      5,893 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 14
      100% cov
      AF319170
      0.34% cov
    • Alignment Length
      20 bp
  • Stachyurus praecox

    Stachyurus praecox

    • Public DB hit
      GI:302749048
      GU351819
    • Hit length
      1,503 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 14
      95% cov
      GU351819
      1.26% cov
    • Alignment Length
      19 bp
Occurrence
9 times in PatSeqDB
Tools
SEQ ID NO
15
Length
20
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297815333
      XM_002875504
    • Hit length
      1,004 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      XM_002875504
      1.99% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225466397
      XR_077988
    • Hit length
      1,778 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      XR_077988
      1.12% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nelumbo nucifera

    Nelumbo nucifera

    • Public DB hit
      GI:224474201
      FJ754270
    • Hit length
      163,307 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      FJ754270
      0.01% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nelumbo lutea

    Nelumbo lutea

    • Public DB hit
      GI:224474113
      FJ754269
    • Hit length
      163,206 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      FJ754269
      0.01% cov
    • Alignment Length
      20 bp
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:332656411
      CP002687
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      18,585,056 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      CP002687
      0% cov
    • Alignment Length
      20 bp
  • Theobroma cacao

    Theobroma cacao

    • Public DB hit
      GI:328924764
      HQ336404
    • Hit length
      160,604 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HQ336404
      0.01% cov
    • Alignment Length
      20 bp
  • Triticum aestivum

    Triticum aestivum

    • Public DB hit
      GI:291498594
      GU985444
    • Hit length
      647,559 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      GU985444
      0% cov
    • Alignment Length
      20 bp
  • Hevea brasiliensis

    Hevea brasiliensis

    • Public DB hit
      GI:308523486
      HQ285842
    • Hit length
      161,191 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HQ285842
      0.01% cov
    • Alignment Length
      20 bp
  • Pyrenaria hirta

    Pyrenaria hirta

    • Public DB hit
      GI:325610403
      HM164070
    • Hit length
      22,864 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HM164070
      0.09% cov
    • Alignment Length
      20 bp
  • Ternstroemia gymnanthera

    Ternstroemia gymnanthera

    • Public DB hit
      GI:325610397
      HM164069
    • Hit length
      22,638 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HM164069
      0.09% cov
    • Alignment Length
      20 bp
  • Stewartia malacodendron

    Stewartia malacodendron

    • Public DB hit
      GI:325610383
      HM164067
    • Hit length
      22,847 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HM164067
      0.09% cov
    • Alignment Length
      20 bp
  • Stewartia rubiginosa

    Stewartia rubiginosa

    • Public DB hit
      GI:325610376
      HM164066
    • Hit length
      23,004 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HM164066
      0.09% cov
    • Alignment Length
      20 bp
  • Stewartia crassifolia

    Stewartia crassifolia

    • Public DB hit
      GI:325610372
      HM164065
    • Hit length
      22,133 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HM164065
      0.09% cov
    • Alignment Length
      20 bp
  • Gordonia lasianthus

    Gordonia lasianthus

    • Public DB hit
      GI:325610368
      HM164064
    • Hit length
      19,984 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HM164064
      0.1% cov
    • Alignment Length
      20 bp
  • Franklinia alatamaha

    Franklinia alatamaha

    • Public DB hit
      GI:325610360
      HM164063
    • Hit length
      25,408 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HM164063
      0.08% cov
    • Alignment Length
      20 bp
  • Diospyros rhombifolia

    Diospyros rhombifolia

    • Public DB hit
      GI:325610353
      HM164061
    • Hit length
      18,516 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HM164061
      0.11% cov
    • Alignment Length
      20 bp
  • Camellia obtusifolia

    Camellia obtusifolia

    • Public DB hit
      GI:325610345
      HM164060
    • Hit length
      25,652 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HM164060
      0.08% cov
    • Alignment Length
      20 bp
  • Fragaria vesca subsp. vesca

    Fragaria vesca subsp. vesca

    • Public DB hit
      GI:324022756
      JF345175
    • Hit length
      155,691 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      JF345175
      0.01% cov
    • Alignment Length
      20 bp
  • Gossypium thurberi

    Gossypium thurberi

    • Public DB hit
      GI:290775771
      GU907100
    • Hit length
      160,264 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      GU907100
      0.01% cov
    • Alignment Length
      20 bp
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:322394252
      HQ874649
    • Hit length
      502,773 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HQ874649
      0% cov
    • Alignment Length
      20 bp
  • Vigna radiata

    Vigna radiata

    • Public DB hit
      GI:308206734
      HM367685
    • Hit length
      401,262 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      HM367685
      0% cov
    • Alignment Length
      20 bp
  • Microlaena stipoides

    Microlaena stipoides

    • Public DB hit
      GI:290790831
      GU592211
    • Hit length
      134,551 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      GU592211
      0.01% cov
    • Alignment Length
      20 bp
  • Potamophila parviflora

    Potamophila parviflora

    • Public DB hit
      GI:290790763
      GU592210
    • Hit length
      134,551 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      GU592210
      0.01% cov
    • Alignment Length
      20 bp
  • Oryza australiensis

    Oryza australiensis

    • Public DB hit
      GI:290790694
      GU592209
    • Hit length
      134,549 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 15
      100% cov
      GU592209
      0.01% cov
    • Alignment Length
      20 bp
Occurrence
9 times in PatSeqDB
Tools
SEQ ID NO
16
Length
27
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Beta vulgaris subsp. maritima

    Beta vulgaris subsp. maritima

    • Public DB hit
      GI:320147991
      FP885871
      1 of 3 hits reported for Beta vulgaris subsp. maritima.
    • Hit length
      269,136 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      FP885871
      0.01% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Silene latifolia

    Silene latifolia

    • Public DB hit
      GI:301338014
      HM562727
    • Hit length
      253,413 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      HM562727
      0.01% cov
    • Alignment Length
      27 bp
  • Pleurozia purpurea

    Pleurozia purpurea

    • Public DB hit
      GI:262190488
      FJ999996
    • Hit length
      168,526 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      FJ999996
      0.02% cov
    • Alignment Length
      27 bp
  • Cycas taitungensis

    Cycas taitungensis

    • Public DB hit
      GI:166706933
      AP009381
    • Hit length
      414,903 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      AP009381
      0.01% cov
    • Alignment Length
      27 bp
  • Helianthus annuus

    Helianthus annuus

    • Public DB hit
      GI:115635714
      AM183221
      1 of 3 hits reported for Helianthus annuus.
    • Hit length
      6,772 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      AM183221
      0.4% cov
    • Alignment Length
      27 bp
  • Physcomitrella patens

    Physcomitrella patens

    • Public DB hit
      GI:90991378
      AB251495
    • Hit length
      105,340 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      AB251495
      0.03% cov
    • Alignment Length
      27 bp
  • Marchantia polymorpha

    Marchantia polymorpha

    • Public DB hit
      GI:786182
      M68929
    • Hit length
      186,609 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      M68929
      0.01% cov
    • Alignment Length
      27 bp
  • Chara vulgaris

    Chara vulgaris

    • Public DB hit
      GI:32966584
      AY267353
    • Hit length
      67,737 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      AY267353
      0.04% cov
    • Alignment Length
      27 bp
  • Beta vulgaris subsp. vulgaris

    Beta vulgaris subsp. vulgaris

    • Public DB hit
      GI:47118321
      BA000009
      1 of 2 hits reported for Beta vulgaris subsp. vulgaris.
    • Hit length
      368,801 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      BA000009
      0.01% cov
    • Alignment Length
      27 bp
  • Coccomyxa subellipsoidea C-169

    Coccomyxa subellipsoidea C-169

    • Public DB hit
      GI:325070719
      HQ874522
    • Hit length
      65,497 bp
    • E Value
      4.35E-3
    • BLAST Score
      46.1 bits
    • Similarity
      96.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      HQ874522
      0.04% cov
    • Alignment Length
      27 bp
  • Deinococcus proteolyticus MRP

    Deinococcus proteolyticus MRP

    • Public DB hit
      GI:324314064
      CP002536
    • Hit length
      2,147,060 bp
    • E Value
      4.35E-3
    • BLAST Score
      46.1 bits
    • Similarity
      96.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      CP002536
      0% cov
    • Alignment Length
      27 bp
  • Deinococcus maricopensis DSM 21211

    Deinococcus maricopensis DSM 21211

    • Public DB hit
      GI:319753907
      CP002454
    • Hit length
      3,498,530 bp
    • E Value
      4.35E-3
    • BLAST Score
      46.1 bits
    • Similarity
      96.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      CP002454
      0% cov
    • Alignment Length
      27 bp
  • Meiothermus ruber DSM 1279

    Meiothermus ruber DSM 1279

    • Public DB hit
      GI:290469363
      CP001743
    • Hit length
      3,097,457 bp
    • E Value
      4.35E-3
    • BLAST Score
      46.1 bits
    • Similarity
      96.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 16
      100% cov
      CP001743
      0% cov
    • Alignment Length
      27 bp
Occurrence
9 times in PatSeqDB
Tools
SEQ ID NO
17
Length
26
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:30678459
      NM_147273
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      514 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      NM_147273
      5.06% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Triticum aestivum

    Triticum aestivum

    • Public DB hit
      GI:291498594
      GU985444
      1 of 2 hits reported for Triticum aestivum.
    • Hit length
      647,559 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      GU985444
      0% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:322394252
      HQ874649
    • Hit length
      502,773 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      HQ874649
      0.01% cov
    • Alignment Length
      26 bp
  • Beta vulgaris subsp. maritima

    Beta vulgaris subsp. maritima

    • Public DB hit
      GI:320147991
      FP885871
      1 of 3 hits reported for Beta vulgaris subsp. maritima.
    • Hit length
      269,136 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      FP885871
      0.01% cov
    • Alignment Length
      26 bp
  • Citrullus lanatus

    Citrullus lanatus

    • Public DB hit
      GI:259156760
      GQ856147
    • Hit length
      379,236 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      GQ856147
      0.01% cov
    • Alignment Length
      26 bp
  • Oryza sativa Indica Group

    Oryza sativa Indica Group

    • Public DB hit
      GI:285026150
      AP011077
    • Hit length
      434,735 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      AP011077
      0.01% cov
    • Alignment Length
      26 bp
  • Oryza rufipogon

    Oryza rufipogon

    • Public DB hit
      GI:285026108
      AP011076
    • Hit length
      559,045 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      AP011076
      0% cov
    • Alignment Length
      26 bp
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:239764757
      GQ220325
      1 of 4 hits reported for Vitis vinifera.
    • Hit length
      202,122 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      GQ220325
      0.01% cov
    • Alignment Length
      26 bp
  • Carica papaya

    Carica papaya

    • Public DB hit
      GI:170522360
      EU431224
    • Hit length
      476,890 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      EU431224
      0.01% cov
    • Alignment Length
      26 bp
  • Bambusa oldhamii

    Bambusa oldhamii

    • Public DB hit
      GI:164422210
      EU365401
    • Hit length
      509,941 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      EU365401
      0.01% cov
    • Alignment Length
      26 bp
  • Helianthus annuus

    Helianthus annuus

    • Public DB hit
      GI:155029062
      X87209
    • Hit length
      3,125 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      X87209
      0.83% cov
    • Alignment Length
      26 bp
  • Zea mays subsp. mays

    Zea mays subsp. mays

    • Public DB hit
      GI:119710194
      DQ490951
      1 of 2 hits reported for Zea mays subsp. mays.
    • Hit length
      557,162 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      DQ490951
      0% cov
    • Alignment Length
      26 bp
  • Tripsacum dactyloides

    Tripsacum dactyloides

    • Public DB hit
      GI:114432085
      DQ984517
    • Hit length
      704,100 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      DQ984517
      0% cov
    • Alignment Length
      26 bp
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:114309646
      DQ984518
    • Hit length
      468,628 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      DQ984518
      0.01% cov
    • Alignment Length
      26 bp
  • Zea luxurians

    Zea luxurians

    • Public DB hit
      GI:110287586
      DQ645537
    • Hit length
      539,368 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      DQ645537
      0% cov
    • Alignment Length
      26 bp
  • Zea mays subsp. parviglumis

    Zea mays subsp. parviglumis

    • Public DB hit
      GI:102567956
      DQ645539
    • Hit length
      680,603 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      DQ645539
      0% cov
    • Alignment Length
      26 bp
  • Zea perennis

    Zea perennis

    • Public DB hit
      GI:102567891
      DQ645538
    • Hit length
      570,354 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 17
      100% cov
      DQ645538
      0% cov
    • Alignment Length
      26 bp
Occurrence
9 times in PatSeqDB
Tools
SEQ ID NO
18
Length
20
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297815335
      XM_002875505
      1 of 2 hits reported for Arabidopsis lyrata subsp. lyrata.
    • Hit length
      611 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      XM_002875505
      3.27% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:330250293
      CP002685
    • Hit length
      19,698,289 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      CP002685
      0% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Triticum aestivum

    Triticum aestivum

    • Public DB hit
      GI:291498594
      GU985444
      1 of 4 hits reported for Triticum aestivum.
    • Hit length
      647,559 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      GU985444
      0% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:322394252
      HQ874649
    • Hit length
      502,773 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      HQ874649
      0% cov
    • Alignment Length
      20 bp
  • Vigna radiata

    Vigna radiata

    • Public DB hit
      GI:308206734
      HM367685
    • Hit length
      401,262 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      HM367685
      0% cov
    • Alignment Length
      20 bp
  • Beta vulgaris subsp. maritima

    Beta vulgaris subsp. maritima

    • Public DB hit
      GI:320147991
      FP885871
      1 of 3 hits reported for Beta vulgaris subsp. maritima.
    • Hit length
      269,136 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      FP885871
      0.01% cov
    • Alignment Length
      20 bp
  • Silene latifolia

    Silene latifolia

    • Public DB hit
      GI:301338014
      HM562727
    • Hit length
      253,413 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      HM562727
      0.01% cov
    • Alignment Length
      20 bp
  • Triticum turgidum subsp. durum

    Triticum turgidum subsp. durum

    • Public DB hit
      GI:255091041
      GQ409824
    • Hit length
      152,605 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      GQ409824
      0.01% cov
    • Alignment Length
      20 bp
  • Cucurbita pepo

    Cucurbita pepo

    • Public DB hit
      GI:259156800
      GQ856148
    • Hit length
      982,833 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      GQ856148
      0% cov
    • Alignment Length
      20 bp
  • Citrullus lanatus

    Citrullus lanatus

    • Public DB hit
      GI:259156760
      GQ856147
    • Hit length
      379,236 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      GQ856147
      0.01% cov
    • Alignment Length
      20 bp
  • Oryza sativa Indica Group

    Oryza sativa Indica Group

    • Public DB hit
      GI:285026150
      AP011077
    • Hit length
      434,735 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      AP011077
      0% cov
    • Alignment Length
      20 bp
  • Oryza rufipogon

    Oryza rufipogon

    • Public DB hit
      GI:285026108
      AP011076
    • Hit length
      559,045 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      AP011076
      0% cov
    • Alignment Length
      20 bp
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:239764757
      GQ220325
      1 of 2 hits reported for Vitis vinifera.
    • Hit length
      202,122 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      GQ220325
      0.01% cov
    • Alignment Length
      20 bp
  • Carica papaya

    Carica papaya

    • Public DB hit
      GI:170522360
      EU431224
    • Hit length
      476,890 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      EU431224
      0% cov
    • Alignment Length
      20 bp
  • Bambusa oldhamii

    Bambusa oldhamii

    • Public DB hit
      GI:164422210
      EU365401
    • Hit length
      509,941 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      EU365401
      0% cov
    • Alignment Length
      20 bp
  • Oryza minuta

    Oryza minuta

    • Public DB hit
      GI:193788749
      AC229748
    • Hit length
      89,902 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      AC229748
      0.02% cov
    • Alignment Length
      20 bp
  • Cycas taitungensis

    Cycas taitungensis

    • Public DB hit
      GI:166706933
      AP009381
    • Hit length
      414,903 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      AP009381
      0% cov
    • Alignment Length
      20 bp
  • Helianthus annuus

    Helianthus annuus

    • Public DB hit
      GI:155029062
      X87209
    • Hit length
      3,125 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 18
      100% cov
      X87209
      0.64% cov
    • Alignment Length
      20 bp
Occurrence
9 times in PatSeqDB
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