Engineering Enzymes Through Genetic Selection

  • Published: Feb 3, 2011
  • Earliest Priority: Jan 09 2007
  • Family: 2
  • Cited Works: 7
  • Cited by: 0
  • Cites: 2
  • Sequences: 22
  • Additional Info: Cited Works Full text
Data obtained from: USPTO Fulltext
22 sequences found in this patent (in total)

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Download sequences in fasta format: 22 nucleotides

Displaying 1 - 10 of 22 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
17
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Xanthomonas axonopodis pv. citri str. 306

    Xanthomonas axonopodis pv. citri str. 306

    • Public DB hit
      GI:21240769
      AE008923
    • Hit length
      5,175,554 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AE008923
      0% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
2
Length
37
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
3
Length
36
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
4
Length
37
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
5
Length
36
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
6
Length
40
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
7
Length
46
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:207028087
      NM_002957
      1 of 15 hits reported for Homo sapiens.
    • Hit length
      5,547 bp
    • E Value
      2.38E-7
    • BLAST Score
      61.9 bits
    • Similarity
      97.14%
    • Coverage
      76.09%
    • Alignment (schematic)

      SEQ ID NO 7
      76.09% cov
      NM_002957
      0.63% cov
    • Alignment Length
      35 bp
    • CIGAR string
      30MN4M11H mismatches: 1 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208965437
      AB463220
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,403 bp
    • E Value
      2.38E-7
    • BLAST Score
      61.9 bits
    • Similarity
      97.14%
    • Coverage
      76.09%
    • Alignment (schematic)

      SEQ ID NO 7
      76.09% cov
      AB463220
      2.49% cov
    • Alignment Length
      35 bp
  • Cloning vector pFB-ERV

    Cloning vector pFB-ERV

    • Public DB hit
      GI:22786170
      AF264696
    • Hit length
      11,065 bp
    • E Value
      2.38E-7
    • BLAST Score
      61.9 bits
    • Similarity
      97.14%
    • Coverage
      76.09%
    • Alignment (schematic)

      SEQ ID NO 7
      76.09% cov
      AF264696
      0.32% cov
    • Alignment Length
      35 bp
  • Cloning vector pERV3

    Cloning vector pERV3

    • Public DB hit
      GI:4003526
      AF098284
    • Hit length
      8,363 bp
    • E Value
      2.38E-7
    • BLAST Score
      61.9 bits
    • Similarity
      97.14%
    • Coverage
      76.09%
    • Alignment (schematic)

      SEQ ID NO 7
      76.09% cov
      AF098284
      0.42% cov
    • Alignment Length
      35 bp
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334323756
      XM_001377398
      1 of 2 hits reported for Monodelphis domestica.
    • Hit length
      1,794 bp
    • E Value
      5.8E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      76.09%
    • Alignment (schematic)

      SEQ ID NO 7
      76.09% cov
      XM_001377398
      1.95% cov
    • Alignment Length
      35 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332833283
      XM_520345
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,150 bp
    • E Value
      5.8E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      76.09%
    • Alignment (schematic)

      SEQ ID NO 7
      76.09% cov
      XM_520345
      1.11% cov
    • Alignment Length
      35 bp
  • Tetraodon nigroviridis

    Tetraodon nigroviridis

    • Public DB hit
      GI:56298812
      CR706556
    • Hit length
      592 bp
    • E Value
      5.8E-5
    • BLAST Score
      54 bits
    • Similarity
      94.29%
    • Coverage
      76.09%
    • Alignment (schematic)

      SEQ ID NO 7
      76.09% cov
      CR706556
      5.91% cov
    • Alignment Length
      35 bp
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
8
Length
17
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Sporisorium reilianum SRZ2

    Sporisorium reilianum SRZ2

    • Public DB hit
      GI:319411478
      FQ311473
    • Hit length
      760,034 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      FQ311473
      0% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Zea mays subsp. mexicana

    Zea mays subsp. mexicana

    • Public DB hit
      GI:434645
      U03968
    • Hit length
      482 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      U03968
      3.53% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
9
Length
46
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332833283
      XM_520345
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,150 bp
    • E Value
      6.48E-14
    • BLAST Score
      83.8 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_520345
      1.46% cov
    • Alignment Length
      46 bp
    • CIGAR string
      39MN6M mismatches: 1 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:207028087
      NM_002957
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      5,547 bp
    • E Value
      6.48E-14
    • BLAST Score
      83.8 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_002957
      0.83% cov
    • Alignment Length
      46 bp
    • CIGAR string
      39MN6M mismatches: 1 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208965437
      AB463220
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,403 bp
    • E Value
      6.48E-14
    • BLAST Score
      83.8 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AB463220
      3.28% cov
    • Alignment Length
      46 bp
  • Cloning vector pFB-ERV

    Cloning vector pFB-ERV

    • Public DB hit
      GI:22786170
      AF264696
    • Hit length
      11,065 bp
    • E Value
      6.48E-14
    • BLAST Score
      83.8 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AF264696
      0.42% cov
    • Alignment Length
      46 bp
  • Cloning vector pERV3

    Cloning vector pERV3

    • Public DB hit
      GI:4003526
      AF098284
    • Hit length
      8,363 bp
    • E Value
      6.48E-14
    • BLAST Score
      83.8 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AF098284
      0.55% cov
    • Alignment Length
      46 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:84579196
      AB220499
    • Hit length
      1,724 bp
    • E Value
      1.58E-11
    • BLAST Score
      75.8 bits
    • Similarity
      97.62%
    • Coverage
      91.3%
    • Alignment (schematic)

      SEQ ID NO 9
      91.3% cov
      AB220499
      2.44% cov
    • Alignment Length
      42 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297685667
      XM_002820359
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,683 bp
    • E Value
      9.39E-7
    • BLAST Score
      60 bits
    • Similarity
      91.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002820359
      2.73% cov
    • Alignment Length
      46 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296191130
      XM_002743477
    • Hit length
      1,928 bp
    • E Value
      9.39E-7
    • BLAST Score
      60 bits
    • Similarity
      94.74%
    • Coverage
      82.61%
    • Alignment (schematic)

      SEQ ID NO 9
      82.61% cov
      XM_002743477
      1.97% cov
    • Alignment Length
      38 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194225998
      XM_001917365
    • Hit length
      1,965 bp
    • E Value
      9.39E-7
    • BLAST Score
      60 bits
    • Similarity
      94.74%
    • Coverage
      82.61%
    • Alignment (schematic)

      SEQ ID NO 9
      82.61% cov
      XM_001917365
      1.93% cov
    • Alignment Length
      38 bp
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
10
Length
66
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
3 times in PatSeqDB
Tools

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