Patents
US 7622283 B2

Methods For Synthesizing Mevalonate

Granted Patent
US 7622283 B2
199-477-640-454-808
Data obtained from: USPTO Fulltext DDBJ Pat EMBL-EBI Pat
13 sequences found in this patent (in total)

Filter sequences

Clear
Download sequences in fasta format: 13 nucleotides

Displaying 1 - 10 of 13 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
1,185
Sequence Type
nucleotide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
  • Escherichia coli DH1

    Escherichia coli DH1

    • Public DB hit
      GI:315134697
      AP012030
      1 of 2 hits reported for Escherichia coli DH1.
    • Hit length
      4,621,430 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AP012030
      0.03% cov
    • Alignment Length
      1,185 bp
    • CIGAR string
      1185M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli BL21(DE3)

    Escherichia coli BL21(DE3)

    • Public DB hit
      GI:313848522
      AM946981
      1 of 2 hits reported for Escherichia coli BL21(DE3).
    • Hit length
      4,558,947 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AM946981
      0.03% cov
    • Alignment Length
      1,185 bp
    • CIGAR string
      1185M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli ETEC H10407

    Escherichia coli ETEC H10407

    • Public DB hit
      GI:309700213
      FN649414
    • Hit length
      5,153,435 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FN649414
      0.02% cov
    • Alignment Length
      1,185 bp
    • CIGAR string
      1185M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli B str. REL606

    Escherichia coli B str. REL606

    • Public DB hit
      GI:253972022
      CP000819
    • Hit length
      4,629,812 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000819
      0.03% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli 'BL21-Gold(DE3)pLysS AG'

    Escherichia coli 'BL21-Gold(DE3)pLysS AG'

    • Public DB hit
      GI:253322479
      CP001665
    • Hit length
      4,570,938 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001665
      0.03% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli BW2952

    Escherichia coli BW2952

    • Public DB hit
      GI:238859724
      CP001396
    • Hit length
      4,578,159 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001396
      0.03% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli str. K-12 substr. DH10B

    Escherichia coli str. K-12 substr. DH10B

    • Public DB hit
      GI:169887498
      CP000948
    • Hit length
      4,686,137 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000948
      0.03% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli ATCC 8739

    Escherichia coli ATCC 8739

    • Public DB hit
      GI:169752989
      CP000946
    • Hit length
      4,746,218 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000946
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli str. K-12 substr. W3110

    Escherichia coli str. K-12 substr. W3110

    • Public DB hit
      GI:85674274
      AP009048
    • Hit length
      4,646,332 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AP009048
      0.03% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli str. K-12 substr. MG1655

    Escherichia coli str. K-12 substr. MG1655

    • Public DB hit
      GI:48994873
      U00096
    • Hit length
      4,639,675 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      U00096
      0.03% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli HS

    Escherichia coli HS

    • Public DB hit
      GI:157065147
      CP000802
    • Hit length
      4,643,538 bp
    • E Value
      0E0
    • BLAST Score
      2,172.8 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000802
      0.03% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli UMNK88

    Escherichia coli UMNK88

    • Public DB hit
      GI:332341332
      CP002729
    • Hit length
      5,186,416 bp
    • E Value
      0E0
    • BLAST Score
      2,128.5 bits
    • Similarity
      99.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002729
      0.02% cov
    • Alignment Length
      1,185 bp
  • Shigella sonnei Ss046

    Shigella sonnei Ss046

    • Public DB hit
      GI:73854091
      CP000038
    • Hit length
      4,825,265 bp
    • E Value
      0E0
    • BLAST Score
      2,084.1 bits
    • Similarity
      98.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000038
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli SMS-3-5

    Escherichia coli SMS-3-5

    • Public DB hit
      GI:170517292
      CP000970
    • Hit length
      5,068,389 bp
    • E Value
      0E0
    • BLAST Score
      2,067.5 bits
    • Similarity
      98.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000970
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli IAI39

    Escherichia coli IAI39

    • Public DB hit
      GI:218368405
      CU928164
    • Hit length
      5,132,068 bp
    • E Value
      0E0
    • BLAST Score
      2,062 bits
    • Similarity
      98.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CU928164
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli ABU 83972

    Escherichia coli ABU 83972

    • Public DB hit
      GI:307551844
      CP001671
    • Hit length
      5,131,397 bp
    • E Value
      0E0
    • BLAST Score
      2,050.9 bits
    • Similarity
      97.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001671
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli UMN026

    Escherichia coli UMN026

    • Public DB hit
      GI:218430358
      CU928163
    • Hit length
      5,202,090 bp
    • E Value
      0E0
    • BLAST Score
      2,050.9 bits
    • Similarity
      97.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CU928163
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli CFT073

    Escherichia coli CFT073

    • Public DB hit
      GI:26111730
      AE014075
    • Hit length
      5,231,428 bp
    • E Value
      0E0
    • BLAST Score
      2,050.9 bits
    • Similarity
      97.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AE014075
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli 042

    Escherichia coli 042

    • Public DB hit
      GI:284919779
      FN554766
    • Hit length
      5,241,977 bp
    • E Value
      0E0
    • BLAST Score
      2,045.4 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FN554766
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli UM146

    Escherichia coli UM146

    • Public DB hit
      GI:307625127
      CP002167
    • Hit length
      4,993,013 bp
    • E Value
      0E0
    • BLAST Score
      2,039.8 bits
    • Similarity
      97.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002167
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli IHE3034

    Escherichia coli IHE3034

    • Public DB hit
      GI:294489418
      CP001969
    • Hit length
      5,108,383 bp
    • E Value
      0E0
    • BLAST Score
      2,039.8 bits
    • Similarity
      97.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001969
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli S88

    Escherichia coli S88

    • Public DB hit
      GI:218363708
      CU928161
    • Hit length
      5,032,268 bp
    • E Value
      0E0
    • BLAST Score
      2,039.8 bits
    • Similarity
      97.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CU928161
      0.02% cov
    • Alignment Length
      1,185 bp
  • Escherichia coli UTI89

    Escherichia coli UTI89

    • Public DB hit
      GI:91070629
      CP000243
    • Hit length
      5,065,741 bp
    • E Value
      0E0
    • BLAST Score
      2,039.8 bits
    • Similarity
      97.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000243
      0.02% cov
    • Alignment Length
      1,185 bp
Occurrence
123 times in PatSeqDB
Tools
SEQ ID NO
2
Length
1,476
Sequence Type
nucleotide
Locations
Claims, Detailed Description, Summary
Declared organism
Artificial
Determined organism
  • Saccharomyces cerevisiae S288c

    Saccharomyces cerevisiae S288c

    • Public DB hit
      GI:296146993
      NM_001182489
      1 of 3 hits reported for Saccharomyces cerevisiae S288c.
    • Hit length
      1,476 bp
    • E Value
      0E0
    • BLAST Score
      2,726.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001182489
      100% cov
    • Alignment Length
      1,476 bp
    • CIGAR string
      1476M mismatches: 0 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae

    Saccharomyces cerevisiae

    • Public DB hit
      GI:927528
      Z50178
      1 of 3 hits reported for Saccharomyces cerevisiae.
    • Hit length
      21,330 bp
    • E Value
      0E0
    • BLAST Score
      2,726.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      Z50178
      6.92% cov
    • Alignment Length
      1,476 bp
  • Saccharomyces cerevisiae EC1118

    Saccharomyces cerevisiae EC1118

    • Public DB hit
      GI:259148440
      FN393082
    • Hit length
      888,813 bp
    • E Value
      0E0
    • BLAST Score
      2,721.2 bits
    • Similarity
      99.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      FN393082
      0.17% cov
    • Alignment Length
      1,476 bp
Occurrence
84 times in PatSeqDB
Tools
SEQ ID NO
3
Length
1,509
Sequence Type
nucleotide
Locations
Claims, Detailed Description, Summary
Declared organism
Artificial
Determined organism
  • Saccharomyces cerevisiae S288c

    Saccharomyces cerevisiae S288c

    • Public DB hit
      GI:296147042
      NM_001182434
      1 of 3 hits reported for Saccharomyces cerevisiae S288c.
    • Hit length
      3,165 bp
    • E Value
      0E0
    • BLAST Score
      2,782.2 bits
    • Similarity
      100%
    • Coverage
      99.8%
    • Alignment (schematic)

      SEQ ID NO 3
      99.8% cov
      NM_001182434
      47.58% cov
    • Alignment Length
      1,506 bp
    • CIGAR string
      3H1506M mismatches: 0 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae

    Saccharomyces cerevisiae

    • Public DB hit
      GI:587529
      Z46373
      1 of 2 hits reported for Saccharomyces cerevisiae.
    • Hit length
      25,135 bp
    • E Value
      0E0
    • BLAST Score
      2,782.2 bits
    • Similarity
      100%
    • Coverage
      99.8%
    • Alignment (schematic)

      SEQ ID NO 3
      99.8% cov
      Z46373
      5.99% cov
    • Alignment Length
      1,506 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:84312736
      DQ332473
    • Hit length
      3,165 bp
    • E Value
      0E0
    • BLAST Score
      2,780.3 bits
    • Similarity
      100%
    • Coverage
      99.73%
    • Alignment (schematic)

      SEQ ID NO 3
      99.73% cov
      DQ332473
      47.55% cov
    • Alignment Length
      1,505 bp
  • Saccharomyces cerevisiae EC1118

    Saccharomyces cerevisiae EC1118

    • Public DB hit
      GI:259148440
      FN393082
      1 of 2 hits reported for Saccharomyces cerevisiae EC1118.
    • Hit length
      888,813 bp
    • E Value
      0E0
    • BLAST Score
      2,765.6 bits
    • Similarity
      99.8%
    • Coverage
      99.8%
    • Alignment (schematic)

      SEQ ID NO 3
      99.8% cov
      FN393082
      0.17% cov
    • Alignment Length
      1,506 bp
  • Vanderwaltozyma polyspora DSM 70294

    Vanderwaltozyma polyspora DSM 70294

    • Public DB hit
      GI:156841149
      XM_001643900
    • Hit length
      3,198 bp
    • E Value
      0E0
    • BLAST Score
      948.5 bits
    • Similarity
      81.27%
    • Coverage
      78.53%
    • Alignment (schematic)

      SEQ ID NO 3
      78.53% cov
      XM_001643900
      37.05% cov
    • Alignment Length
      1,196 bp
  • Candida glabrata CBS 138

    Candida glabrata CBS 138

    • Public DB hit
      GI:50293712
      XM_449268
      1 of 2 hits reported for Candida glabrata CBS 138.
    • Hit length
      3,171 bp
    • E Value
      0E0
    • BLAST Score
      911.5 bits
    • Similarity
      80.33%
    • Coverage
      82.17%
    • Alignment (schematic)

      SEQ ID NO 3
      82.17% cov
      XM_449268
      39.1% cov
    • Alignment Length
      1,266 bp
  • Candida glabrata

    Candida glabrata

    • Public DB hit
      GI:196049179
      CR380958
    • Hit length
      1,455,689 bp
    • E Value
      0E0
    • BLAST Score
      911.5 bits
    • Similarity
      80.33%
    • Coverage
      82.17%
    • Alignment (schematic)

      SEQ ID NO 3
      82.17% cov
      CR380958
      0.09% cov
    • Alignment Length
      1,266 bp
  • Lachancea thermotolerans CBS 6340

    Lachancea thermotolerans CBS 6340

    • Public DB hit
      GI:255714307
      XM_002553390
      1 of 2 hits reported for Lachancea thermotolerans CBS 6340.
    • Hit length
      3,141 bp
    • E Value
      2.83E-146
    • BLAST Score
      529.3 bits
    • Similarity
      76.01%
    • Coverage
      72.23%
    • Alignment (schematic)

      SEQ ID NO 3
      72.23% cov
      XM_002553390
      34.7% cov
    • Alignment Length
      1,117 bp
Occurrence
48 times in PatSeqDB
Tools
SEQ ID NO
4
Length
1,332
Sequence Type
nucleotide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
  • Saccharomyces cerevisiae S288c

    Saccharomyces cerevisiae S288c

    • Public DB hit
      GI:296147327
      NM_001182715
      1 of 3 hits reported for Saccharomyces cerevisiae S288c.
    • Hit length
      1,332 bp
    • E Value
      0E0
    • BLAST Score
      2,459 bits
    • Similarity
      100%
    • Coverage
      99.92%
    • Alignment (schematic)

      SEQ ID NO 4
      99.92% cov
      NM_001182715
      99.92% cov
    • Alignment Length
      1,331 bp
    • CIGAR string
      1331M1H mismatches: 0 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae

    Saccharomyces cerevisiae

    • Public DB hit
      GI:854459
      Z49809
      1 of 3 hits reported for Saccharomyces cerevisiae.
    • Hit length
      28,201 bp
    • E Value
      0E0
    • BLAST Score
      2,459 bits
    • Similarity
      100%
    • Coverage
      99.92%
    • Alignment (schematic)

      SEQ ID NO 4
      99.92% cov
      Z49809
      4.72% cov
    • Alignment Length
      1,331 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:84313377
      DQ333114
    • Hit length
      1,332 bp
    • E Value
      0E0
    • BLAST Score
      2,459 bits
    • Similarity
      100%
    • Coverage
      99.92%
    • Alignment (schematic)

      SEQ ID NO 4
      99.92% cov
      DQ333114
      99.92% cov
    • Alignment Length
      1,331 bp
  • Saccharomyces cerevisiae EC1118

    Saccharomyces cerevisiae EC1118

    • Public DB hit
      GI:259148440
      FN393082
    • Hit length
      888,813 bp
    • E Value
      0E0
    • BLAST Score
      2,436.9 bits
    • Similarity
      99.7%
    • Coverage
      99.92%
    • Alignment (schematic)

      SEQ ID NO 4
      99.92% cov
      FN393082
      0.15% cov
    • Alignment Length
      1,331 bp
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
5
Length
1,356
Sequence Type
nucleotide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:84311934
      DQ331671
    • Hit length
      1,356 bp
    • E Value
      0E0
    • BLAST Score
      2,505.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      DQ331671
      100% cov
    • Alignment Length
      1,356 bp
    • CIGAR string
      1356M mismatches: 0 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae S288c

    Saccharomyces cerevisiae S288c

    • Public DB hit
      GI:296147339
      NM_001182727
      1 of 3 hits reported for Saccharomyces cerevisiae S288c.
    • Hit length
      1,356 bp
    • E Value
      0E0
    • BLAST Score
      2,503.3 bits
    • Similarity
      100%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 5
      99.93% cov
      NM_001182727
      99.93% cov
    • Alignment Length
      1,355 bp
    • CIGAR string
      1355M1H mismatches: 0 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae

    Saccharomyces cerevisiae

    • Public DB hit
      GI:887599
      Z49939
      1 of 2 hits reported for Saccharomyces cerevisiae.
    • Hit length
      40,397 bp
    • E Value
      0E0
    • BLAST Score
      2,503.3 bits
    • Similarity
      100%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 5
      99.93% cov
      Z49939
      3.35% cov
    • Alignment Length
      1,355 bp
  • Saccharomyces cerevisiae EC1118

    Saccharomyces cerevisiae EC1118

    • Public DB hit
      GI:259148440
      FN393082
    • Hit length
      888,813 bp
    • E Value
      0E0
    • BLAST Score
      2,486.7 bits
    • Similarity
      99.78%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 5
      99.93% cov
      FN393082
      0.15% cov
    • Alignment Length
      1,355 bp
Occurrence
22 times in PatSeqDB
Tools
SEQ ID NO
6
Length
1,191
Sequence Type
nucleotide
Locations
Detailed Description, Summary
Declared organism
Artificial
Determined organism
  • Saccharomyces cerevisiae S288c

    Saccharomyces cerevisiae S288c

    • Public DB hit
      GI:296147805
      NM_001183220
      1 of 3 hits reported for Saccharomyces cerevisiae S288c.
    • Hit length
      1,191 bp
    • E Value
      0E0
    • BLAST Score
      2,200.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001183220
      100% cov
    • Alignment Length
      1,191 bp
    • CIGAR string
      1191M mismatches: 0 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae

    Saccharomyces cerevisiae

    • Public DB hit
      GI:1302549
      Z71658
      1 of 4 hits reported for Saccharomyces cerevisiae.
    • Hit length
      2,032 bp
    • E Value
      0E0
    • BLAST Score
      2,200.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      Z71658
      58.61% cov
    • Alignment Length
      1,191 bp
  • Saccharomyces cerevisiae EC1118

    Saccharomyces cerevisiae EC1118

    • Public DB hit
      GI:290770991
      FN393083
    • Hit length
      219,572 bp
    • E Value
      0E0
    • BLAST Score
      2,189.4 bits
    • Similarity
      99.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FN393083
      0.54% cov
    • Alignment Length
      1,191 bp
Occurrence
144 times in PatSeqDB
Tools
SEQ ID NO
7
Length
9,253
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Saccharomyces cerevisiae S288c

    Saccharomyces cerevisiae S288c

    • Public DB hit
      GI:296147042
      NM_001182434
      1 of 6 hits reported for Saccharomyces cerevisiae S288c.
    • Hit length
      3,165 bp
    • E Value
      0E0
    • BLAST Score
      2,782.2 bits
    • Similarity
      100%
    • Coverage
      16.28%
    • Alignment (schematic)

      SEQ ID NO 7
      16.28% cov
      NM_001182434
      47.58% cov
    • Alignment Length
      1,506 bp
    • CIGAR string
      3373H1506M4374H mismatches: 0 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae

    Saccharomyces cerevisiae

    • Public DB hit
      GI:587529
      Z46373
      1 of 10 hits reported for Saccharomyces cerevisiae.
    • Hit length
      25,135 bp
    • E Value
      0E0
    • BLAST Score
      2,782.2 bits
    • Similarity
      100%
    • Coverage
      16.28%
    • Alignment (schematic)

      SEQ ID NO 7
      16.28% cov
      Z46373
      5.99% cov
    • Alignment Length
      1,506 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:84312736
      DQ332473
      1 of 3 hits reported for synthetic construct.
    • Hit length
      3,165 bp
    • E Value
      0E0
    • BLAST Score
      2,780.3 bits
    • Similarity
      100%
    • Coverage
      16.26%
    • Alignment (schematic)

      SEQ ID NO 7
      16.26% cov
      DQ332473
      47.55% cov
    • Alignment Length
      1,505 bp
  • Saccharomyces cerevisiae EC1118

    Saccharomyces cerevisiae EC1118

    • Public DB hit
      GI:259148440
      FN393082
    • Hit length
      888,813 bp
    • E Value
      0E0
    • BLAST Score
      2,765.6 bits
    • Similarity
      99.8%
    • Coverage
      16.28%
    • Alignment (schematic)

      SEQ ID NO 7
      16.28% cov
      FN393082
      0.17% cov
    • Alignment Length
      1,506 bp
  • Escherichia coli DH1

    Escherichia coli DH1

    • Public DB hit
      GI:315134697
      AP012030
    • Hit length
      4,621,430 bp
    • E Value
      0E0
    • BLAST Score
      2,209.7 bits
    • Similarity
      100%
    • Coverage
      12.93%
    • Alignment (schematic)

      SEQ ID NO 7
      12.93% cov
      AP012030
      0.03% cov
    • Alignment Length
      1,196 bp
  • Escherichia coli BL21(DE3)

    Escherichia coli BL21(DE3)

    • Public DB hit
      GI:313848522
      AM946981
    • Hit length
      4,558,947 bp
    • E Value
      0E0
    • BLAST Score
      2,209.7 bits
    • Similarity
      100%
    • Coverage
      12.93%
    • Alignment (schematic)

      SEQ ID NO 7
      12.93% cov
      AM946981
      0.03% cov
    • Alignment Length
      1,196 bp
Occurrence
20 times in PatSeqDB
Tools
SEQ ID NO
8
Length
4,760
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
20 times in PatSeqDB
Tools
SEQ ID NO
9
Length
4,482
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
20 times in PatSeqDB
Tools
SEQ ID NO
10
Length
549
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Escherichia coli DH1

    Escherichia coli DH1

    • Public DB hit
      GI:315134697
      AP012030
      1 of 2 hits reported for Escherichia coli DH1.
    • Hit length
      4,621,430 bp
    • E Value
      0E0
    • BLAST Score
      1,014.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AP012030
      0.01% cov
    • Alignment Length
      549 bp
    • CIGAR string
      549M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli ETEC H10407

    Escherichia coli ETEC H10407

    • Public DB hit
      GI:309700213
      FN649414
    • Hit length
      5,153,435 bp
    • E Value
      0E0
    • BLAST Score
      1,014.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      FN649414
      0.01% cov
    • Alignment Length
      549 bp
    • CIGAR string
      549M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli BW2952

    Escherichia coli BW2952

    • Public DB hit
      GI:238859724
      CP001396
    • Hit length
      4,578,159 bp
    • E Value
      0E0
    • BLAST Score
      1,014.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001396
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli str. K-12 substr. DH10B

    Escherichia coli str. K-12 substr. DH10B

    • Public DB hit
      GI:169887498
      CP000948
    • Hit length
      4,686,137 bp
    • E Value
      0E0
    • BLAST Score
      1,014.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP000948
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli str. K-12 substr. W3110

    Escherichia coli str. K-12 substr. W3110

    • Public DB hit
      GI:85674274
      AP009048
    • Hit length
      4,646,332 bp
    • E Value
      0E0
    • BLAST Score
      1,014.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AP009048
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli str. K-12 substr. MG1655

    Escherichia coli str. K-12 substr. MG1655

    • Public DB hit
      GI:48994873
      U00096
    • Hit length
      4,639,675 bp
    • E Value
      0E0
    • BLAST Score
      1,014.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      U00096
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli

    Escherichia coli

    • Public DB hit
      GI:4633512
      AF119715
      1 of 2 hits reported for Escherichia coli.
    • Hit length
      549 bp
    • E Value
      0E0
    • BLAST Score
      1,014.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AF119715
      100% cov
    • Alignment Length
      549 bp
  • Shigella dysenteriae Sd197

    Shigella dysenteriae Sd197

    • Public DB hit
      GI:81239530
      CP000034
    • Hit length
      4,369,232 bp
    • E Value
      0E0
    • BLAST Score
      970.6 bits
    • Similarity
      98.54%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP000034
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli KO11FL

    Escherichia coli KO11FL

    • Public DB hit
      GI:323376397
      CP002516
    • Hit length
      4,920,168 bp
    • E Value
      0E0
    • BLAST Score
      954 bits
    • Similarity
      98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002516
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli W

    Escherichia coli W

    • Public DB hit
      GI:315059226
      CP002185
    • Hit length
      4,900,968 bp
    • E Value
      0E0
    • BLAST Score
      954 bits
    • Similarity
      98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002185
      0.01% cov
    • Alignment Length
      549 bp
  • Shigella flexneri 2002017

    Shigella flexneri 2002017

    • Public DB hit
      GI:281599365
      CP001383
    • Hit length
      4,650,856 bp
    • E Value
      0E0
    • BLAST Score
      948.5 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001383
      0.01% cov
    • Alignment Length
      549 bp
  • Shigella flexneri 5 str. 8401

    Shigella flexneri 5 str. 8401

    • Public DB hit
      GI:110613622
      CP000266
    • Hit length
      4,574,284 bp
    • E Value
      0E0
    • BLAST Score
      948.5 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP000266
      0.01% cov
    • Alignment Length
      549 bp
  • Shigella flexneri 2a str. 301

    Shigella flexneri 2a str. 301

    • Public DB hit
      GI:24080789
      AE005674
    • Hit length
      4,607,203 bp
    • E Value
      0E0
    • BLAST Score
      948.5 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AE005674
      0.01% cov
    • Alignment Length
      549 bp
  • Shigella flexneri 2a str. 2457T

    Shigella flexneri 2a str. 2457T

    • Public DB hit
      GI:30043918
      AE014073
    • Hit length
      4,599,354 bp
    • E Value
      0E0
    • BLAST Score
      948.5 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AE014073
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli ABU 83972

    Escherichia coli ABU 83972

    • Public DB hit
      GI:307551844
      CP001671
    • Hit length
      5,131,397 bp
    • E Value
      0E0
    • BLAST Score
      937.4 bits
    • Similarity
      97.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001671
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli CFT073

    Escherichia coli CFT073

    • Public DB hit
      GI:26111730
      AE014075
    • Hit length
      5,231,428 bp
    • E Value
      0E0
    • BLAST Score
      937.4 bits
    • Similarity
      97.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AE014075
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli ED1a

    Escherichia coli ED1a

    • Public DB hit
      GI:218425442
      CU928162
    • Hit length
      5,209,548 bp
    • E Value
      0E0
    • BLAST Score
      920.8 bits
    • Similarity
      96.9%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CU928162
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli NA114

    Escherichia coli NA114

    • Public DB hit
      GI:333968017
      CP002797
    • Hit length
      4,935,241 bp
    • E Value
      0E0
    • BLAST Score
      915.2 bits
    • Similarity
      96.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002797
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli O83:H1 str. NRG 857C

    Escherichia coli O83:H1 str. NRG 857C

    • Public DB hit
      GI:312944605
      CP001855
    • Hit length
      4,747,819 bp
    • E Value
      0E0
    • BLAST Score
      915.2 bits
    • Similarity
      96.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001855
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli UM146

    Escherichia coli UM146

    • Public DB hit
      GI:307625127
      CP002167
    • Hit length
      4,993,013 bp
    • E Value
      0E0
    • BLAST Score
      915.2 bits
    • Similarity
      96.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002167
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli IHE3034

    Escherichia coli IHE3034

    • Public DB hit
      GI:294489418
      CP001969
    • Hit length
      5,108,383 bp
    • E Value
      0E0
    • BLAST Score
      915.2 bits
    • Similarity
      96.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001969
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli SE15

    Escherichia coli SE15

    • Public DB hit
      GI:281177210
      AP009378
    • Hit length
      4,717,338 bp
    • E Value
      0E0
    • BLAST Score
      915.2 bits
    • Similarity
      96.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AP009378
      0.01% cov
    • Alignment Length
      549 bp
  • Escherichia coli LF82

    Escherichia coli LF82

    • Public DB hit
      GI:222031834
      CU651637
    • Hit length
      4,773,108 bp
    • E Value
      0E0
    • BLAST Score
      915.2 bits
    • Similarity
      96.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CU651637
      0.01% cov
    • Alignment Length
      549 bp
Occurrence
129 times in PatSeqDB
Tools

Download Citation


Sign in to the Lens

Forgot Password? Register New Account
Feedback