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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
110 sequences found in this patent (in total)

Displaying 1 - 10 of 110 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
32
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
32
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
33
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
32
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
24
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Mycobacterium tuberculosis KZN 4207

    Mycobacterium tuberculosis KZN 4207

    • Public DB hit
      GI:328456706
      CP001662
    • Hit length
      4,394,985 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP001662
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253318418
      CP001658
    • Hit length
      4,398,250 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP001658
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium bovis BCG str. Tokyo 172

    Mycobacterium bovis BCG str. Tokyo 172

    • Public DB hit
      GI:224771496
      AP010918
    • Hit length
      4,371,711 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AP010918
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis F11

    Mycobacterium tuberculosis F11

    • Public DB hit
      GI:148719718
      CP000717
    • Hit length
      4,424,435 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000717
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis H37Ra

    Mycobacterium tuberculosis H37Ra

    • Public DB hit
      GI:148503909
      CP000611
    • Hit length
      4,419,977 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000611
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121491530
      AM408590
    • Hit length
      4,374,522 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AM408590
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:50952454
      AE000516
    • Hit length
      4,403,837 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AE000516
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:41353619
      BX842575
    • Hit length
      349,306 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BX842575
      0.01% cov
    • Alignment Length
      24 bp
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31617663
      BX248337
    • Hit length
      327,650 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BX248337
      0.01% cov
    • Alignment Length
      24 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
24
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Mycobacterium tuberculosis KZN 4207

    Mycobacterium tuberculosis KZN 4207

    • Public DB hit
      GI:328456706
      CP001662
    • Hit length
      4,394,985 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001662
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253318418
      CP001658
    • Hit length
      4,398,250 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001658
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium bovis BCG str. Tokyo 172

    Mycobacterium bovis BCG str. Tokyo 172

    • Public DB hit
      GI:224771496
      AP010918
    • Hit length
      4,371,711 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AP010918
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis F11

    Mycobacterium tuberculosis F11

    • Public DB hit
      GI:148719718
      CP000717
    • Hit length
      4,424,435 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000717
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis H37Ra

    Mycobacterium tuberculosis H37Ra

    • Public DB hit
      GI:148503909
      CP000611
    • Hit length
      4,419,977 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000611
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121491530
      AM408590
    • Hit length
      4,374,522 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AM408590
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:50952454
      AE000516
    • Hit length
      4,403,837 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AE000516
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:41353619
      BX842575
    • Hit length
      349,306 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      BX842575
      0.01% cov
    • Alignment Length
      24 bp
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31617663
      BX248337
    • Hit length
      327,650 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      BX248337
      0.01% cov
    • Alignment Length
      24 bp
  • Leishmania mexicana MHOM/GT/2001/U1103

    Leishmania mexicana MHOM/GT/2001/U1103

    • Public DB hit
      GI:322489601
      FR799567
    • Hit length
      610,423 bp
    • E Value
      2.62E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 6
      91.67% cov
      FR799567
      0% cov
    • Alignment Length
      22 bp
  • Opitutus terrae PB90-1

    Opitutus terrae PB90-1

    • Public DB hit
      GI:177839040
      CP001032
    • Hit length
      5,957,605 bp
    • E Value
      2.62E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 6
      91.67% cov
      CP001032
      0% cov
    • Alignment Length
      22 bp
  • Cyanidioschyzon merolae strain 10D

    Cyanidioschyzon merolae strain 10D

    • Public DB hit
      GI:151559133
      AP006490
    • Hit length
      739,753 bp
    • E Value
      2.62E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 6
      91.67% cov
      AP006490
      0% cov
    • Alignment Length
      22 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
24
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Streptomyces hygroscopicus

    Streptomyces hygroscopicus

    • Public DB hit
      GI:39932993
      AF506520
      1 of 2 hits reported for Streptomyces hygroscopicus.
    • Hit length
      13,513 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AF506520
      0.18% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptomyces fradiae

    Streptomyces fradiae

    • Public DB hit
      GI:62857275
      AB211959
      1 of 5 hits reported for Streptomyces fradiae.
    • Hit length
      39,237 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB211959
      0.06% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Arthrobacter sp. KW

    Arthrobacter sp. KW

    • Public DB hit
      GI:71558944
      DQ124296
    • Hit length
      17,246 bp
    • E Value
      1.07E-2
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 7
      91.67% cov
      DQ124296
      0.13% cov
    • Alignment Length
      22 bp
Occurrence
21 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
24
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Mycobacterium tuberculosis KZN 4207

    Mycobacterium tuberculosis KZN 4207

    • Public DB hit
      GI:328456706
      CP001662
    • Hit length
      4,394,985 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CP001662
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253318418
      CP001658
    • Hit length
      4,398,250 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CP001658
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium bovis BCG str. Tokyo 172

    Mycobacterium bovis BCG str. Tokyo 172

    • Public DB hit
      GI:224771496
      AP010918
    • Hit length
      4,371,711 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AP010918
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis F11

    Mycobacterium tuberculosis F11

    • Public DB hit
      GI:148719718
      CP000717
    • Hit length
      4,424,435 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CP000717
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis H37Ra

    Mycobacterium tuberculosis H37Ra

    • Public DB hit
      GI:148503909
      CP000611
    • Hit length
      4,419,977 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CP000611
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121491530
      AM408590
    • Hit length
      4,374,522 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AM408590
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:50952454
      AE000516
    • Hit length
      4,403,837 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AE000516
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:41353619
      BX842575
    • Hit length
      349,306 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      BX842575
      0.01% cov
    • Alignment Length
      24 bp
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31617663
      BX248337
    • Hit length
      327,650 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      BX248337
      0.01% cov
    • Alignment Length
      24 bp
  • Geobacter sp. M21

    Geobacter sp. M21

    • Public DB hit
      GI:251773506
      CP001661
    • Hit length
      4,745,806 bp
    • E Value
      2.62E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 8
      91.67% cov
      CP001661
      0% cov
    • Alignment Length
      22 bp
  • Azoarcus sp. BH72

    Azoarcus sp. BH72

    • Public DB hit
      GI:119668705
      AM406670
    • Hit length
      4,376,040 bp
    • E Value
      2.62E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 8
      91.67% cov
      AM406670
      0% cov
    • Alignment Length
      22 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
24
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Streptomyces venezuelae ATCC 10712

    Streptomyces venezuelae ATCC 10712

    • Public DB hit
      GI:328880049
      FR845719
    • Hit length
      8,226,158 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      FR845719
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pBKS::zeo-ID-hyg

    Cloning vector pBKS::zeo-ID-hyg

    • Public DB hit
      GI:302749838
      GU459080
    • Hit length
      4,786 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU459080
      0.5% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pGH1000A::zeo-ID

    Cloning vector pGH1000A::zeo-ID

    • Public DB hit
      GI:302749834
      GU459079
    • Hit length
      5,893 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU459079
      0.41% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pMV261hyg::GFP-ID

    Cloning vector pMV261hyg::GFP-ID

    • Public DB hit
      GI:302749817
      GU459074
    • Hit length
      5,464 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU459074
      0.44% cov
    • Alignment Length
      24 bp
  • Cloning vector pYUBDuet

    Cloning vector pYUBDuet

    • Public DB hit
      GI:317457388
      HQ247815
    • Hit length
      5,087 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      HQ247815
      0.47% cov
    • Alignment Length
      24 bp
  • Cloning vector pYUB28b

    Cloning vector pYUB28b

    • Public DB hit
      GI:317457387
      HQ247814
    • Hit length
      4,921 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      HQ247814
      0.49% cov
    • Alignment Length
      24 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312306062
      HQ259114
      1 of 4 hits reported for synthetic construct.
    • Hit length
      3,634 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      HQ259114
      0.66% cov
    • Alignment Length
      24 bp
  • Cloning vector pMQ351

    Cloning vector pMQ351

    • Public DB hit
      GI:312191039
      HQ418395
    • Hit length
      9,921 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      HQ418395
      0.24% cov
    • Alignment Length
      24 bp
  • Cloning vector pMQ353

    Cloning vector pMQ353

    • Public DB hit
      GI:301134304
      GU339053
    • Hit length
      8,843 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU339053
      0.27% cov
    • Alignment Length
      24 bp
  • Promoter probe vector pMQ354

    Promoter probe vector pMQ354

    • Public DB hit
      GI:301134303
      GU339052
    • Hit length
      8,422 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU339052
      0.28% cov
    • Alignment Length
      24 bp
  • Allelic replacement vector pMQ310

    Allelic replacement vector pMQ310

    • Public DB hit
      GI:301134302
      GU339051
    • Hit length
      5,461 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU339051
      0.44% cov
    • Alignment Length
      24 bp
  • Shuttle vector pMQ235

    Shuttle vector pMQ235

    • Public DB hit
      GI:301134301
      GU339050
    • Hit length
      9,568 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU339050
      0.25% cov
    • Alignment Length
      24 bp
  • Shuttle vector pMQ225

    Shuttle vector pMQ225

    • Public DB hit
      GI:301134300
      GU339049
    • Hit length
      7,076 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU339049
      0.34% cov
    • Alignment Length
      24 bp
  • Cloning vector pMQ352

    Cloning vector pMQ352

    • Public DB hit
      GI:301134299
      GU339048
    • Hit length
      8,677 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU339048
      0.28% cov
    • Alignment Length
      24 bp
  • Expression vector pMQ311

    Expression vector pMQ311

    • Public DB hit
      GI:301134298
      GU339047
    • Hit length
      7,084 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU339047
      0.34% cov
    • Alignment Length
      24 bp
  • Cloning vector pMQ300

    Cloning vector pMQ300

    • Public DB hit
      GI:301134293
      GU339046
    • Hit length
      6,432 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU339046
      0.37% cov
    • Alignment Length
      24 bp
  • Delivery vector pMQ299

    Delivery vector pMQ299

    • Public DB hit
      GI:301134292
      GU339045
    • Hit length
      6,913 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU339045
      0.35% cov
    • Alignment Length
      24 bp
  • Shuttle vector pMQ297

    Shuttle vector pMQ297

    • Public DB hit
      GI:301134291
      GU339044
    • Hit length
      6,261 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      GU339044
      0.38% cov
    • Alignment Length
      24 bp
  • Mycobacterial tetracycline-inducible vector pMEND-Lx

    Mycobacterial tetracycline-inducible vector pMEND-Lx

    • Public DB hit
      GI:295986906
      HM002749
    • Hit length
      8,798 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      HM002749
      0.27% cov
    • Alignment Length
      24 bp
  • Mycobacterial tetracycline-inducible vector pKW08-Lx

    Mycobacterial tetracycline-inducible vector pKW08-Lx

    • Public DB hit
      GI:295986902
      HM002748
    • Hit length
      7,960 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      HM002748
      0.3% cov
    • Alignment Length
      24 bp
  • Integrating expression vector pJEB403+drrA

    Integrating expression vector pJEB403+drrA

    • Public DB hit
      GI:219646793
      FJ009257
    • Hit length
      6,945 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      FJ009257
      0.35% cov
    • Alignment Length
      24 bp
  • Cloning vector pYT923hyg

    Cloning vector pYT923hyg

    • Public DB hit
      GI:254674503
      AB513495
    • Hit length
      11,784 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AB513495
      0.2% cov
    • Alignment Length
      24 bp
Occurrence
29 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
24
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Mycobacterium tuberculosis KZN 4207

    Mycobacterium tuberculosis KZN 4207

    • Public DB hit
      GI:328456706
      CP001662
    • Hit length
      4,394,985 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001662
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253318418
      CP001658
    • Hit length
      4,398,250 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001658
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium bovis BCG str. Tokyo 172

    Mycobacterium bovis BCG str. Tokyo 172

    • Public DB hit
      GI:224771496
      AP010918
    • Hit length
      4,371,711 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AP010918
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis

    Mycobacterium tuberculosis

    • Public DB hit
      GI:110671823
      DQ778958
    • Hit length
      360 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      DQ778958
      6.67% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis F11

    Mycobacterium tuberculosis F11

    • Public DB hit
      GI:148719718
      CP000717
    • Hit length
      4,424,435 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP000717
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis H37Ra

    Mycobacterium tuberculosis H37Ra

    • Public DB hit
      GI:148503909
      CP000611
    • Hit length
      4,419,977 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP000611
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121491530
      AM408590
    • Hit length
      4,374,522 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AM408590
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:50952454
      AE000516
    • Hit length
      4,403,837 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AE000516
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:41353619
      BX842575
    • Hit length
      349,306 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      BX842575
      0.01% cov
    • Alignment Length
      24 bp
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31617663
      BX248337
    • Hit length
      327,650 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      BX248337
      0.01% cov
    • Alignment Length
      24 bp
  • Postia placenta Mad-698-R

    Postia placenta Mad-698-R

    • Public DB hit
      GI:242217204
      XM_002474359
      1 of 4 hits reported for Postia placenta Mad-698-R.
    • Hit length
      369 bp
    • E Value
      2.62E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 10
      91.67% cov
      XM_002474359
      5.96% cov
    • Alignment Length
      22 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder

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