Frazzled Nucleotide Sequence, Expression Product, Composition And Use

  • Published: Jul 2, 2009
  • Earliest Priority: Jul 11 1997
  • Family: 17
  • Cited Works: 0
  • Cited by: 0
  • Cites: 0
  • Sequences: 18
  • Additional Info:
Data obtained from: EMBL-EBI Pat DDBJ Pat NCBI GenBank (DDBJ)
18 sequences found in this patent (in total)

Filter sequences

Clear
Download sequences in fasta format: 9 peptides 9 DNAs

Displaying 1 - 10 of 18 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
2,190
Sequence Type
DNA
Locations
Undetermined
Declared organism
Xenopus laevis (African clawed frog)
Determined organism
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:191961809
      NM_001128651
      1 of 2 hits reported for Xenopus (Silurana) tropicalis.
    • Hit length
      6,713 bp
    • E Value
      0E0
    • BLAST Score
      1,844.1 bits
    • Similarity
      90.67%
    • Coverage
      63.42%
    • Alignment (schematic)

      SEQ ID NO 1
      63.42% cov
      NM_001128651
      20.77% cov
    • Alignment Length
      1,404 bp
    • CIGAR string
      800H11MN3MN12M2N5MN9MN12MI2MD3MN13MNMN14MNMN3MN11MN7MN6MN14MN13MN15MN53MN2MN26MN20MN2MN5MN5MN8MN32MN68MN32MN11MN2MN2MN35MN29MN2MN9MN16MN26MN2MN11MN20MN35MN30MN7MN5MN5MN5MN7MN3MIMD5MN4MN2MNMN3MN57MN7MN2MN5MI4MD4MN3MN19MN8MN14MN2MN2MN3MN49MNMN9MN41MN35MN15MN7MN19MN3MN51MN7MN3M2NMN9MN10MN3MD2MI6MN2MI4MD2MI5MN2MN3MN2MD3MN4MN3MNM2I11MI3MD6MN6M2NMN3MN2MN6MI2MN4MNM2I18MN12MIMIMN5MN6MN3MIMND2MN7MD15MN13MN9MD9MN3MN2MN3M1H mismatches: 106 - insertions: 15 - deletions: 10
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
2
Length
1,140
Sequence Type
DNA
Locations
Undetermined
Declared organism
Xenopus laevis (African clawed frog)
Determined organism
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:148225309
      NM_001088521
      1 of 4 hits reported for Xenopus laevis.
    • Hit length
      1,123 bp
    • E Value
      0E0
    • BLAST Score
      2,074.9 bits
    • Similarity
      100%
    • Coverage
      98.51%
    • Alignment (schematic)

      SEQ ID NO 2
      98.51% cov
      NM_001088521
      100% cov
    • Alignment Length
      1,123 bp
    • CIGAR string
      1123M17H mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:113205881
      NM_001044506
    • Hit length
      1,204 bp
    • E Value
      0E0
    • BLAST Score
      1,452.6 bits
    • Similarity
      90.59%
    • Coverage
      95.53%
    • Alignment (schematic)

      SEQ ID NO 2
      95.53% cov
      NM_001044506
      92.94% cov
    • Alignment Length
      1,127 bp
    • CIGAR string
      6H26MN14MIM2I30MN7MD2MI7MN24MN17MNM2N4MN6MN12MN57MN5MN10M2N14MN20MN42MN10MN24MN52MN29MIMD11MN31MN5MN2MN2MN17MN11MN20MN36MNMIMD3MN9MN20MN44MN11MN11MN10MN54MN6M2N9MN36MD3MNMI28MN5M2N4MN5MNMN2MN10MN14MND8M2I3M2I9MIMNMN3MDMI14MN6MN6MN23M5IMIM2I2M2IM4I2M3IM2I2M4I2MI8MNMNMN3MIMDMD5MN18MN58M45H mismatches: 60 - insertions: 38 - deletions: 8
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
3
Length
1,146
Sequence Type
DNA
Locations
Undetermined
Declared organism
Xenopus laevis (African clawed frog)
Determined organism
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:7839500
      AF255340
      1 of 4 hits reported for Xenopus laevis.
    • Hit length
      1,485 bp
    • E Value
      0E0
    • BLAST Score
      1,960.4 bits
    • Similarity
      99.72%
    • Coverage
      93.37%
    • Alignment (schematic)

      SEQ ID NO 3
      93.37% cov
      AF255340
      72.12% cov
    • Alignment Length
      1,071 bp
    • CIGAR string
      28H518MN200MN275MI75M48H mismatches: 2 - insertions: 1 - deletions: 0
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:284005009
      NM_001016688
      1 of 4 hits reported for Xenopus (Silurana) tropicalis.
    • Hit length
      1,033 bp
    • E Value
      0E0
    • BLAST Score
      1,168.2 bits
    • Similarity
      90.92%
    • Coverage
      75.83%
    • Alignment (schematic)

      SEQ ID NO 3
      75.83% cov
      NM_001016688
      84.12% cov
    • Alignment Length
      870 bp
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
4
Length
502
Sequence Type
DNA
Locations
Undetermined
Declared organism
Xenopus laevis (African clawed frog)
Determined organism
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:148225309
      NM_001088521
      1 of 5 hits reported for Xenopus laevis.
    • Hit length
      1,123 bp
    • E Value
      0E0
    • BLAST Score
      902.3 bits
    • Similarity
      99.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001088521
      44.43% cov
    • Alignment Length
      502 bp
    • CIGAR string
      39MDM2D321MN137M mismatches: 1 - insertions: 0 - deletions: 3
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:113205881
      NM_001044506
    • Hit length
      1,204 bp
    • E Value
      0E0
    • BLAST Score
      750.9 bits
    • Similarity
      93.66%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001044506
      41.69% cov
    • Alignment Length
      505 bp
  • Ambystoma mexicanum

    Ambystoma mexicanum

    • Public DB hit
      GI:14280009
      AF308868
    • Hit length
      1,220 bp
    • E Value
      3.71E-51
    • BLAST Score
      211.6 bits
    • Similarity
      76.81%
    • Coverage
      81.87%
    • Alignment (schematic)

      SEQ ID NO 4
      81.87% cov
      AF308868
      33.69% cov
    • Alignment Length
      427 bp
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
5
Length
15
Sequence Type
DNA
Locations
Undetermined
Declared organism
Xenopus laevis (African clawed frog)
Determined organism
Occurrence
85 times in PatSeqDB
Tools
SEQ ID NO
6
Length
34
Sequence Type
DNA
Locations
Undetermined
Declared organism
Xenopus laevis (African clawed frog)
Determined organism
Occurrence
77 times in PatSeqDB
Tools
SEQ ID NO
7
Length
68
Sequence Type
DNA
Locations
Undetermined
Declared organism
Xenopus laevis (African clawed frog)
Determined organism
  • Expression vector AF286077

    Expression vector AF286077

    • Public DB hit
      GI:12034712
      AF286077
    • Hit length
      8,799 bp
    • E Value
      1.48E-25
    • BLAST Score
      123 bits
    • Similarity
      100%
    • Coverage
      97.06%
    • Alignment (schematic)

      SEQ ID NO 7
      97.06% cov
      AF286077
      0.75% cov
    • Alignment Length
      66 bp
    • CIGAR string
      66M2H mismatches: 0 - insertions: 0 - deletions: 0
  • Retroviral Tet-shRNA expression vector TtRMPVIR

    Retroviral Tet-shRNA expression vector TtRMPVIR

    • Public DB hit
      GI:313652104
      HQ456318
    • Hit length
      9,040 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      HQ456318
      0.72% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Retroviral Tet-shRNA expression vector TRMPVIR

    Retroviral Tet-shRNA expression vector TRMPVIR

    • Public DB hit
      GI:313652099
      HQ456317
    • Hit length
      9,173 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      HQ456317
      0.71% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Targeting vector Ptbp1

    Targeting vector Ptbp1

    • Public DB hit
      GI:307557308
      HM588137
    • Hit length
      14,874 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      HM588137
      0.44% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • PiggyBac insertional mutagenesis vector Slingshot-PB

    PiggyBac insertional mutagenesis vector Slingshot-PB

    • Public DB hit
      GI:294985311
      GU937109
    • Hit length
      15,199 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      GU937109
      0.43% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Lentivirus shuttle vector pLV.FLPe.PurR

    Lentivirus shuttle vector pLV.FLPe.PurR

    • Public DB hit
      GI:288191513
      GU253314
    • Hit length
      9,650 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      GU253314
      0.67% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Rabies virus-derived expression vector pTIT-L

    Rabies virus-derived expression vector pTIT-L

    • Public DB hit
      GI:283825304
      GU299215
    • Hit length
      9,575 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      GU299215
      0.68% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Rabies virus-derived expression vector pTIT-G

    Rabies virus-derived expression vector pTIT-G

    • Public DB hit
      GI:283825301
      GU299214
    • Hit length
      4,932 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      GU299214
      1.32% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Rabies virus-derived expression vector pTIT-P

    Rabies virus-derived expression vector pTIT-P

    • Public DB hit
      GI:283825298
      GU299213
    • Hit length
      4,026 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      GU299213
      1.61% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Rabies virus-derived expression vector pTIT-N

    Rabies virus-derived expression vector pTIT-N

    • Public DB hit
      GI:283825295
      GU299212
    • Hit length
      4,535 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      GU299212
      1.43% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Exchangeable gene trap vector pU-22

    Exchangeable gene trap vector pU-22

    • Public DB hit
      GI:157734259
      AB362337
    • Hit length
      6,582 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      AB362337
      0.99% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Expression vector pCeMM-CTAP(SG)

    Expression vector pCeMM-CTAP(SG)

    • Public DB hit
      GI:138375594
      EF467048
    • Hit length
      6,884 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      EF467048
      0.94% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Expression vector pCeMM-NTAP(GS)

    Expression vector pCeMM-NTAP(GS)

    • Public DB hit
      GI:138375580
      EF467047
    • Hit length
      6,860 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      EF467047
      0.95% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Retroviral vector pCX4redEX*

    Retroviral vector pCX4redEX*

    • Public DB hit
      GI:129560438
      AB296084
    • Hit length
      6,152 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      AB296084
      1.06% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Retroviral vector pCX4gfp*

    Retroviral vector pCX4gfp*

    • Public DB hit
      GI:129560435
      AB296083
    • Hit length
      6,203 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      AB296083
      1.05% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Expression vector pCeMM-CTAP(SG)-Gw

    Expression vector pCeMM-CTAP(SG)-Gw

    • Public DB hit
      GI:126034360
      EF143814
    • Hit length
      8,766 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      EF143814
      0.74% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Lentiviral vector pNL-GFP-RRE(SA)

    Lentiviral vector pNL-GFP-RRE(SA)

    • Public DB hit
      GI:125747096
      EF408805
    • Hit length
      9,669 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      EF408805
      0.67% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Expression vector pCeMM-NTAP(GS)-Gw

    Expression vector pCeMM-NTAP(GS)-Gw

    • Public DB hit
      GI:119394410
      EF143813
    • Hit length
      8,577 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      EF143813
      0.76% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pTCCR-Auto

    Cloning vector pTCCR-Auto

    • Public DB hit
      GI:45861238
      AY569780
    • Hit length
      12,404 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      AY569780
      0.52% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pTCCR

    Cloning vector pTCCR

    • Public DB hit
      GI:45861232
      AY569779
    • Hit length
      8,811 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      AY569779
      0.74% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Exchangeable gene trap vector pU-Hachi

    Exchangeable gene trap vector pU-Hachi

    • Public DB hit
      GI:82940954
      AB242616
    • Hit length
      10,032 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      AB242616
      0.65% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Retrotransposon vector MEL/ELM

    Retrotransposon vector MEL/ELM

    • Public DB hit
      GI:31414875
      AY260554
    • Hit length
      9,945 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      AY260554
      0.65% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Retrotransposon vector ELM 5

    Retrotransposon vector ELM 5

    • Public DB hit
      GI:31414872
      AY260553
    • Hit length
      10,047 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      AY260553
      0.65% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pFB-ERV

    Cloning vector pFB-ERV

    • Public DB hit
      GI:22786170
      AF264696
    • Hit length
      11,065 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      AF264696
      0.59% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
  • Exchangeable gene trap vector pU-18

    Exchangeable gene trap vector pU-18

    • Public DB hit
      GI:63253290
      AB212854
    • Hit length
      9,667 bp
    • E Value
      5.34E-25
    • BLAST Score
      121.2 bits
    • Similarity
      100%
    • Coverage
      95.59%
    • Alignment (schematic)

      SEQ ID NO 7
      95.59% cov
      AB212854
      0.67% cov
    • Alignment Length
      65 bp
    • CIGAR string
      65M3H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
85 times in PatSeqDB
Tools
SEQ ID NO
8
Length
27
Sequence Type
DNA
Locations
Undetermined
Declared organism
Xenopus laevis (African clawed frog)
Determined organism
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:148226911
      NM_001088556
      1 of 5 hits reported for Xenopus laevis.
    • Hit length
      2,723 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001088556
      0.99% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
9
Length
27
Sequence Type
DNA
Locations
Undetermined
Declared organism
Xenopus laevis (African clawed frog)
Determined organism
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:148225309
      NM_001088521
      1 of 5 hits reported for Xenopus laevis.
    • Hit length
      1,123 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001088521
      2.4% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:113205881
      NM_001044506
      1 of 2 hits reported for Xenopus (Silurana) tropicalis.
    • Hit length
      1,204 bp
    • E Value
      4.35E-3
    • BLAST Score
      46.1 bits
    • Similarity
      96.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001044506
      2.24% cov
    • Alignment Length
      27 bp
    • CIGAR string
      8MN18M mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
10
Length
281
Sequence Type
peptide
Locations
Undetermined
Declared organism
Xenopus laevis (African clawed frog)
Determined organism
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:148225310
      NP_001081990
      1 of 2 hits reported for Xenopus laevis.
    • Hit length
      280 aa
    • E Value
      2.96E-140
    • BLAST Score
      503.1 bits
    • Similarity
      99.61%
    • Coverage
      91.1%
    • Alignment (schematic)

      SEQ ID NO 10
      91.1% cov
      NP_001081990
      91.07% cov
    • Alignment Length
      256 aa
    • CIGAR string
      17MD235MNMN25H mismatches: 2 - insertions: 0 - deletions: 1
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:113205882
      NP_001037971
    • Hit length
      281 aa
    • E Value
      4.57E-134
    • BLAST Score
      482.3 bits
    • Similarity
      97.66%
    • Coverage
      91.1%
    • Alignment (schematic)

      SEQ ID NO 10
      91.1% cov
      NP_001037971
      91.1% cov
    • Alignment Length
      256 aa
    • CIGAR string
      8MN5MN13MN10MN10MN3MN24MN26MN11MN27MN16MN30M3N36MN19M3N25H mismatches: 18 - insertions: 0 - deletions: 0
  • Ambystoma mexicanum

    Ambystoma mexicanum

    • Public DB hit
      GI:14280010
      AAK58842
    • Hit length
      284 aa
    • E Value
      1.08E-105
    • BLAST Score
      387.9 bits
    • Similarity
      81.96%
    • Coverage
      90.39%
    • Alignment (schematic)

      SEQ ID NO 10
      90.39% cov
      AAK58842
      89.08% cov
    • Alignment Length
      255 aa
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:118082168
      XP_415985
    • Hit length
      286 aa
    • E Value
      4.58E-99
    • BLAST Score
      365.9 bits
    • Similarity
      79.92%
    • Coverage
      90.04%
    • Alignment (schematic)

      SEQ ID NO 10
      90.04% cov
      XP_415985
      88.81% cov
    • Alignment Length
      254 aa
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326911295
      XP_003201996
    • Hit length
      286 aa
    • E Value
      4.58E-98
    • BLAST Score
      362.8 bits
    • Similarity
      79.13%
    • Coverage
      90.04%
    • Alignment (schematic)

      SEQ ID NO 10
      90.04% cov
      XP_003201996
      88.81% cov
    • Alignment Length
      254 aa
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224093488
      XP_002189723
    • Hit length
      277 aa
    • E Value
      1.24E-92
    • BLAST Score
      344.7 bits
    • Similarity
      79.75%
    • Coverage
      85.77%
    • Alignment (schematic)

      SEQ ID NO 10
      85.77% cov
      XP_002189723
      87.36% cov
    • Alignment Length
      242 aa
  • Tetraodon nigroviridis

    Tetraodon nigroviridis

    • Public DB hit
      GI:47224395
      CAG08645
    • Hit length
      282 aa
    • E Value
      2.32E-81
    • BLAST Score
      307.4 bits
    • Similarity
      76.6%
    • Coverage
      82.92%
    • Alignment (schematic)

      SEQ ID NO 10
      82.92% cov
      CAG08645
      82.98% cov
    • Alignment Length
      235 aa
Occurrence
7 times in PatSeqDB
Tools

Feedback