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Search for Biological Sequences disclosed in Patents

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Data obtained from: WIPO-PCT
190 sequences found in this patent (in total)

Displaying 1 - 10 of 190 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,407
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:257153318
      NM_001164528
      1 of 5 hits reported for Mus musculus.
    • Hit length
      8,260 bp
    • E Value
      0E0
    • BLAST Score
      1,077.7 bits
    • Similarity
      88.84%
    • Coverage
      62.62%
    • Alignment (schematic)

      SEQ ID NO 1
      62.62% cov
      NM_001164528
      10.73% cov
    • Alignment Length
      896 bp
    • CIGAR string
      2H6MI3MD6MI3MN2MN2MNMN10MN4MNMN4MI2MN3MD10MN3MN5MD13MIMI3MI4M2IMI3MN3MNMIMNMD3MD3MNMI2MN5MINMDMN3MNMI5MD5MNMDNMD2MI2MN28MN2MN2MN6M3N2MN8MN13MN23MN44MN8MN2MN2MN17MN2MN2MN14MN41MN3MN4MN6MNMN11MN32MN8MN5MN2MN5MN8MN14MN2MN35MN2MN5MN26MN23MN8MN11MN11MN2MN5MN2MNMN4MN3MN84MN9MN7MDMIMN14MN23MN14MN44MN8MN4M524H mismatches: 75 - insertions: 15 - deletions: 10
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:156120792
      NM_001102073
    • Hit length
      3,670 bp
    • E Value
      0E0
    • BLAST Score
      966.9 bits
    • Similarity
      87.09%
    • Coverage
      60.98%
    • Alignment (schematic)

      SEQ ID NO 1
      60.98% cov
      NM_001102073
      23.79% cov
    • Alignment Length
      883 bp
    • CIGAR string
      25H11MN4MIMD9MI5M2N9MD4MNMI5MI3MIN3MN2MIMIMI2MI9M4I2M2IM3I3MNMNM2N5MD2MD2N2MNMI3M2N4M2N3MN9MN3MD2MI2MN9MI6MD5MN6MN2MN2MDMIN3MN2MN2MN2MN18MDMI14MN50MNMN5MN6MN17MN2MN2MN2MN20MN17MN6MN10MN3MD2MI3MN4MN8MN2MN20MN11MN2MN23MN8MN17MN44MN23MN2MN20MN2MN8MN11MN14MN2MN7MN3MDMI3MNMNMN6MN7MN68MN6MN7MN18MN34MN8MN5M2N10MN2MN8MN8MN8MN4M524H mismatches: 79 - insertions: 25 - deletions: 10
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291397491
      XM_002715227
    • Hit length
      1,983 bp
    • E Value
      0E0
    • BLAST Score
      957.7 bits
    • Similarity
      86.54%
    • Coverage
      62.62%
    • Alignment (schematic)

      SEQ ID NO 1
      62.62% cov
      XM_002715227
      44.43% cov
    • Alignment Length
      899 bp
    • CIGAR string
      2H9MNMN4MI6MD4MNMDMN4MD4MIMIM2I2MI2M2N2MN3MD2MIMDN2MD5MDMNMNMN7MN17MD4MIM2NMI2MD2MDNM2NMDMIN2MI5M2N10MN6M2NM2NMD2MN2MI12MIMDN5M2N6MN2MN2MDMI4MN2MNMN23MNMN6MN8MN41MN20MN2MN2MN17MN29MN5MN5MN18MN8M2N3MN2MN29MN8MN5MN23MN5MN14MN26MN3MNMN8MN2MN2MN2MN11MN8MI3MD2M2N16MN11MN2MN8MI3MD2MN11MN2MN2MN4MN3MDMDMI3MI9MN73MN9MN7MN17MN8MN41MN11MN20MN8MN4M524H mismatches: 85 - insertions: 18 - deletions: 18
Occurrence
43 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
1,350
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:199589292
      FJ024498
    • Hit length
      2,589 bp
    • E Value
      0E0
    • BLAST Score
      972.5 bits
    • Similarity
      88.08%
    • Coverage
      61.04%
    • Alignment (schematic)

      SEQ ID NO 2
      61.04% cov
      FJ024498
      32.02% cov
    • Alignment Length
      839 bp
    • CIGAR string
      2H6MI3MD6MI3MN2MN2MNMN10MN4MNMN4MI2MN3MD10MN3MN5MD13MIMI3MI4M2IMI3MN3MNMIMNMD3MD3MNMI2MN5MINMDMN3MNMI5MD5MNMDNMD2MI2MN28MN2MN2MN6MNMN2MN8MN13MN23MN44MN8MN2MN2MN17MN2MN2MN14MN41MN3MN4MN6MNMN11MN32MN8MN5MN2MN5MN8MN14MN2MN35MN2MN5MN23MN2MN23MN8MN11MN11MN2MN5MN2MNMN4MN3MN27MN9MN7MDMIMN14MN23MN14MN44MN8MN4M524H mismatches: 75 - insertions: 15 - deletions: 10
Occurrence
43 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
639
Type
peptide
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:40786420
      NP_955383
    • Hit length
      639 aa
    • E Value
      0E0
    • BLAST Score
      1,319.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_955383
      100% cov
    • Alignment Length
      639 aa
    • CIGAR string
      639M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662822
      XP_002809886
    • Hit length
      639 aa
    • E Value
      0E0
    • BLAST Score
      1,315.1 bits
    • Similarity
      99.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002809886
      100% cov
    • Alignment Length
      639 aa
    • CIGAR string
      76MN308MN253M mismatches: 2 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:390477174
      XP_002807757
    • Hit length
      623 aa
    • E Value
      0E0
    • BLAST Score
      1,171.4 bits
    • Similarity
      98.72%
    • Coverage
      97.5%
    • Alignment (schematic)

      SEQ ID NO 3
      97.5% cov
      XP_002807757
      100% cov
    • Alignment Length
      623 aa
    • CIGAR string
      16H2MN90M2N19MN65MN146MN13MN85MN3MN17MN64M2N4MN39MN62M mismatches: 14 - insertions: 0 - deletions: 0
  • Otolemur garnettii

    Otolemur garnettii

    • Public DB hit
      GI:395825117
      XP_003785789
    • Hit length
      641 aa
    • E Value
      0E0
    • BLAST Score
      1,149 bits
    • Similarity
      96.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_003785789
      100% cov
    • Alignment Length
      641 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:156120793
      NP_001095543
    • Hit length
      640 aa
    • E Value
      0E0
    • BLAST Score
      1,122.8 bits
    • Similarity
      94.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001095543
      100% cov
    • Alignment Length
      640 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:199589285
      ACH90402
      1 of 4 hits reported for Mus musculus.
    • Hit length
      646 aa
    • E Value
      0E0
    • BLAST Score
      1,102.8 bits
    • Similarity
      93.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ACH90402
      100% cov
    • Alignment Length
      648 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:392332809
      XP_002724905
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      630 aa
    • E Value
      0E0
    • BLAST Score
      1,076.6 bits
    • Similarity
      93.83%
    • Coverage
      97.5%
    • Alignment (schematic)

      SEQ ID NO 3
      97.5% cov
      XP_002724905
      100% cov
    • Alignment Length
      632 aa
  • Loxodonta africana

    Loxodonta africana

    • Public DB hit
      GI:344287041
      XP_003415264
    • Hit length
      615 aa
    • E Value
      0E0
    • BLAST Score
      1,048.5 bits
    • Similarity
      92.64%
    • Coverage
      97.5%
    • Alignment (schematic)

      SEQ ID NO 3
      97.5% cov
      XP_003415264
      100% cov
    • Alignment Length
      625 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297281424
      XP_001088329
    • Hit length
      576 aa
    • E Value
      0E0
    • BLAST Score
      1,042.7 bits
    • Similarity
      89.42%
    • Coverage
      97.5%
    • Alignment (schematic)

      SEQ ID NO 3
      97.5% cov
      XP_001088329
      100% cov
    • Alignment Length
      624 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:345803302
      XP_547485
    • Hit length
      625 aa
    • E Value
      0E0
    • BLAST Score
      1,030 bits
    • Similarity
      92.82%
    • Coverage
      97.5%
    • Alignment (schematic)

      SEQ ID NO 3
      97.5% cov
      XP_547485
      100% cov
    • Alignment Length
      627 aa
  • Cavia porcellus

    Cavia porcellus

    • Public DB hit
      GI:348565857
      XP_003468719
    • Hit length
      709 aa
    • E Value
      0E0
    • BLAST Score
      963.4 bits
    • Similarity
      87.02%
    • Coverage
      97.65%
    • Alignment (schematic)

      SEQ ID NO 3
      97.65% cov
      XP_003468719
      81.38% cov
    • Alignment Length
      624 aa
Occurrence
131 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
254
Type
peptide
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:40786420
      NP_955383
    • Hit length
      639 aa
    • E Value
      1.09E-165
    • BLAST Score
      485 bits
    • Similarity
      98.72%
    • Coverage
      92.13%
    • Alignment (schematic)

      SEQ ID NO 4
      92.13% cov
      NP_955383
      36.62% cov
    • Alignment Length
      234 aa
    • CIGAR string
      158MNM2N67MN4M20H mismatches: 4 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:343962507
      BAK62841
    • Hit length
      317 aa
    • E Value
      7.23E-153
    • BLAST Score
      440.3 bits
    • Similarity
      98.62%
    • Coverage
      85.83%
    • Alignment (schematic)

      SEQ ID NO 4
      85.83% cov
      BAK62841
      68.77% cov
    • Alignment Length
      218 aa
    • CIGAR string
      16H142MNM2N67MN4M20H mismatches: 4 - insertions: 0 - deletions: 0
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:355746166
      EHH50791
    • Hit length
      476 aa
    • E Value
      6.16E-144
    • BLAST Score
      423.7 bits
    • Similarity
      99.06%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 4
      83.46% cov
      EHH50791
      44.54% cov
    • Alignment Length
      212 aa
    • CIGAR string
      158MNM2N50M42H mismatches: 3 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:380793153
      AFE68452
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      280 aa
    • E Value
      7.26E-144
    • BLAST Score
      416 bits
    • Similarity
      99.06%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 4
      83.46% cov
      AFE68452
      75.71% cov
    • Alignment Length
      212 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662822
      XP_002809886
    • Hit length
      639 aa
    • E Value
      5.69E-142
    • BLAST Score
      424.1 bits
    • Similarity
      98.58%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 4
      83.46% cov
      XP_002809886
      33.18% cov
    • Alignment Length
      212 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:199589297
      ACH90408
      1 of 6 hits reported for Mus musculus.
    • Hit length
      412 aa
    • E Value
      3.35E-138
    • BLAST Score
      406.8 bits
    • Similarity
      97.64%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 4
      83.46% cov
      ACH90408
      51.46% cov
    • Alignment Length
      212 aa
  • Otolemur garnettii

    Otolemur garnettii

    • Public DB hit
      GI:395825117
      XP_003785789
    • Hit length
      641 aa
    • E Value
      3.92E-135
    • BLAST Score
      406.8 bits
    • Similarity
      97.17%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 4
      83.46% cov
      XP_003785789
      33.07% cov
    • Alignment Length
      212 aa
  • Cricetulus griseus

    Cricetulus griseus

    • Public DB hit
      GI:354480303
      XP_003502347
      1 of 2 hits reported for Cricetulus griseus.
    • Hit length
      621 aa
    • E Value
      3.01E-134
    • BLAST Score
      403.7 bits
    • Similarity
      97.17%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 4
      83.46% cov
      XP_003502347
      34.14% cov
    • Alignment Length
      212 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:156120793
      NP_001095543
    • Hit length
      640 aa
    • E Value
      6.11E-134
    • BLAST Score
      403.7 bits
    • Similarity
      95.75%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 4
      83.46% cov
      NP_001095543
      33.12% cov
    • Alignment Length
      212 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291397492
      XP_002715273
    • Hit length
      660 aa
    • E Value
      8.59E-134
    • BLAST Score
      403.7 bits
    • Similarity
      97.17%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 4
      83.46% cov
      XP_002715273
      32.12% cov
    • Alignment Length
      212 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:392332817
      XP_003752702
    • Hit length
      571 aa
    • E Value
      7.66E-129
    • BLAST Score
      388.3 bits
    • Similarity
      98.47%
    • Coverage
      77.17%
    • Alignment (schematic)

      SEQ ID NO 4
      77.17% cov
      XP_003752702
      34.33% cov
    • Alignment Length
      196 aa
Occurrence
59 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
254
Type
peptide
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:40786420
      NP_955383
    • Hit length
      639 aa
    • E Value
      2.77E-170
    • BLAST Score
      496.5 bits
    • Similarity
      100%
    • Coverage
      92.13%
    • Alignment (schematic)

      SEQ ID NO 5
      92.13% cov
      NP_955383
      36.62% cov
    • Alignment Length
      234 aa
    • CIGAR string
      234M20H mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:355746166
      EHH50791
    • Hit length
      476 aa
    • E Value
      3.45E-170
    • BLAST Score
      490.3 bits
    • Similarity
      100%
    • Coverage
      92.13%
    • Alignment (schematic)

      SEQ ID NO 5
      92.13% cov
      EHH50791
      49.16% cov
    • Alignment Length
      234 aa
    • CIGAR string
      226MN7M20H mismatches: 1 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662822
      XP_002809886
    • Hit length
      639 aa
    • E Value
      1.37E-169
    • BLAST Score
      494.6 bits
    • Similarity
      99.57%
    • Coverage
      92.13%
    • Alignment (schematic)

      SEQ ID NO 5
      92.13% cov
      XP_002809886
      36.62% cov
    • Alignment Length
      234 aa
    • CIGAR string
      76MN157M20H mismatches: 1 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:380793153
      AFE68452
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      280 aa
    • E Value
      1.98E-169
    • BLAST Score
      481.1 bits
    • Similarity
      100%
    • Coverage
      92.13%
    • Alignment (schematic)

      SEQ ID NO 5
      92.13% cov
      AFE68452
      83.57% cov
    • Alignment Length
      234 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:343962507
      BAK62841
    • Hit length
      317 aa
    • E Value
      3.46E-157
    • BLAST Score
      451.4 bits
    • Similarity
      100%
    • Coverage
      85.83%
    • Alignment (schematic)

      SEQ ID NO 5
      85.83% cov
      BAK62841
      68.77% cov
    • Alignment Length
      218 aa
  • Cavia porcellus

    Cavia porcellus

    • Public DB hit
      GI:348565857
      XP_003468719
    • Hit length
      709 aa
    • E Value
      1.93E-154
    • BLAST Score
      458.4 bits
    • Similarity
      99.54%
    • Coverage
      86.22%
    • Alignment (schematic)

      SEQ ID NO 5
      86.22% cov
      XP_003468719
      30.89% cov
    • Alignment Length
      219 aa
  • Heterocephalus glaber

    Heterocephalus glaber

    • Public DB hit
      GI:351696233
      EHA99151
    • Hit length
      631 aa
    • E Value
      3.15E-152
    • BLAST Score
      450.3 bits
    • Similarity
      98.62%
    • Coverage
      85.83%
    • Alignment (schematic)

      SEQ ID NO 5
      85.83% cov
      EHA99151
      34.55% cov
    • Alignment Length
      218 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:199589297
      ACH90408
      1 of 6 hits reported for Mus musculus.
    • Hit length
      412 aa
    • E Value
      2.13E-141
    • BLAST Score
      414.8 bits
    • Similarity
      98.58%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 5
      83.46% cov
      ACH90408
      51.46% cov
    • Alignment Length
      212 aa
  • Otolemur garnettii

    Otolemur garnettii

    • Public DB hit
      GI:395825117
      XP_003785789
    • Hit length
      641 aa
    • E Value
      3.6E-138
    • BLAST Score
      414.5 bits
    • Similarity
      98.11%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 5
      83.46% cov
      XP_003785789
      33.07% cov
    • Alignment Length
      212 aa
  • Cricetulus griseus

    Cricetulus griseus

    • Public DB hit
      GI:354480303
      XP_003502347
      1 of 2 hits reported for Cricetulus griseus.
    • Hit length
      621 aa
    • E Value
      2.47E-137
    • BLAST Score
      411.8 bits
    • Similarity
      98.11%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 5
      83.46% cov
      XP_003502347
      34.14% cov
    • Alignment Length
      212 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291397492
      XP_002715273
    • Hit length
      660 aa
    • E Value
      4.69E-137
    • BLAST Score
      412.1 bits
    • Similarity
      98.11%
    • Coverage
      83.46%
    • Alignment (schematic)

      SEQ ID NO 5
      83.46% cov
      XP_002715273
      32.12% cov
    • Alignment Length
      212 aa
Occurrence
59 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
235
Type
peptide
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:119611185
      EAW90779
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      571 aa
    • E Value
      1.19E-151
    • BLAST Score
      445.7 bits
    • Similarity
      98.15%
    • Coverage
      91.91%
    • Alignment (schematic)

      SEQ ID NO 6
      91.91% cov
      EAW90779
      37.83% cov
    • Alignment Length
      216 aa
    • CIGAR string
      158MNM2N48MN4MN19H mismatches: 5 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:380793153
      AFE68452
    • Hit length
      280 aa
    • E Value
      1.08E-125
    • BLAST Score
      369 bits
    • Similarity
      89.9%
    • Coverage
      80.43%
    • Alignment (schematic)

      SEQ ID NO 6
      80.43% cov
      AFE68452
      74.29% cov
    • Alignment Length
      208 aa
    • CIGAR string
      158MNM2N4M19I23M46H mismatches: 3 - insertions: 19 - deletions: 0
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:355746166
      EHH50791
    • Hit length
      476 aa
    • E Value
      1.81E-125
    • BLAST Score
      375.6 bits
    • Similarity
      89.9%
    • Coverage
      80.43%
    • Alignment (schematic)

      SEQ ID NO 6
      80.43% cov
      EHH50791
      43.7% cov
    • Alignment Length
      208 aa
    • CIGAR string
      158MNM2N4M19I23M46H mismatches: 3 - insertions: 19 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:199589293
      ACH90406
      1 of 7 hits reported for Mus musculus.
    • Hit length
      627 aa
    • E Value
      1.03E-123
    • BLAST Score
      375.9 bits
    • Similarity
      97.41%
    • Coverage
      82.13%
    • Alignment (schematic)

      SEQ ID NO 6
      82.13% cov
      ACH90406
      30.78% cov
    • Alignment Length
      193 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662822
      XP_002809886
    • Hit length
      639 aa
    • E Value
      1.1E-123
    • BLAST Score
      376.3 bits
    • Similarity
      89.42%
    • Coverage
      80.43%
    • Alignment (schematic)

      SEQ ID NO 6
      80.43% cov
      XP_002809886
      32.55% cov
    • Alignment Length
      208 aa
  • Otolemur garnettii

    Otolemur garnettii

    • Public DB hit
      GI:395825117
      XP_003785789
    • Hit length
      641 aa
    • E Value
      1.09E-116
    • BLAST Score
      358.6 bits
    • Similarity
      87.98%
    • Coverage
      80.43%
    • Alignment (schematic)

      SEQ ID NO 6
      80.43% cov
      XP_003785789
      32.45% cov
    • Alignment Length
      208 aa
  • Cricetulus griseus

    Cricetulus griseus

    • Public DB hit
      GI:354480303
      XP_003502347
      1 of 2 hits reported for Cricetulus griseus.
    • Hit length
      621 aa
    • E Value
      4.81E-116
    • BLAST Score
      356.3 bits
    • Similarity
      87.98%
    • Coverage
      80.43%
    • Alignment (schematic)

      SEQ ID NO 6
      80.43% cov
      XP_003502347
      33.49% cov
    • Alignment Length
      208 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291397492
      XP_002715273
    • Hit length
      660 aa
    • E Value
      7.42E-116
    • BLAST Score
      356.7 bits
    • Similarity
      87.98%
    • Coverage
      80.43%
    • Alignment (schematic)

      SEQ ID NO 6
      80.43% cov
      XP_002715273
      31.52% cov
    • Alignment Length
      208 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:156120793
      NP_001095543
    • Hit length
      640 aa
    • E Value
      1.42E-115
    • BLAST Score
      355.5 bits
    • Similarity
      86.54%
    • Coverage
      80.43%
    • Alignment (schematic)

      SEQ ID NO 6
      80.43% cov
      NP_001095543
      32.5% cov
    • Alignment Length
      208 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:392332811
      XP_003752699
    • Hit length
      611 aa
    • E Value
      1.2E-114
    • BLAST Score
      352.4 bits
    • Similarity
      98.31%
    • Coverage
      75.32%
    • Alignment (schematic)

      SEQ ID NO 6
      75.32% cov
      XP_003752699
      28.97% cov
    • Alignment Length
      177 aa
Occurrence
59 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
1,287
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
43 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
428
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
Occurrence
55 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
524
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:6624884
      AL009182
    • Hit length
      111,020 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AL009182
      0.47% cov
    • Alignment Length
      524 bp
    • CIGAR string
      524M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
43 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
57
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332811140
      XM_513968
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      8,127 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_513968
      0.7% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326913098
      XM_003202831
      1 of 2 hits reported for Meleagris gallopavo.
    • Hit length
      1,956 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003202831
      2.91% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:312922347
      NM_199351
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      8,127 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_199351
      0.7% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301784008
      XM_002927378
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,052 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002927378
      2.78% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297662821
      XM_002809840
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,781 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002809840
      2.05% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297281423
      XM_001088329
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      2,437 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001088329
      2.34% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296229907
      XM_002807711
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,965 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002807711
      2.9% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291397491
      XM_002715227
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      1,983 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002715227
      2.87% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:257153318
      NM_001164528
      1 of 4 hits reported for Mus musculus.
    • Hit length
      8,260 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001164528
      0.69% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224044227
      XM_002191073
      1 of 2 hits reported for Taeniopygia guttata.
    • Hit length
      2,097 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002191073
      2.72% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:118083703
      XM_416658
    • Hit length
      3,851 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_416658
      1.48% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73961414
      XM_547485
    • Hit length
      2,223 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_547485
      2.56% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261857517
      AB527117
    • Hit length
      1,934 bp
    • E Value
      1.07E-20
    • BLAST Score
      106.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AB527117
      2.95% cov
    • Alignment Length
      57 bp
    • CIGAR string
      57M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
43 times in PatSeqDB
Tools
PatSeq Finder

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