Cold-adapted Equine Influenza Viruses

  • Published: Apr 26, 2007
  • Earliest Priority: Feb 16 2000
  • Family: 20
  • Cited Works: 0
  • Cited by: 2
  • Cites: 8
  • Sequences: 130
  • Additional Info: Full text
Data obtained from: USPTO Fulltext
130 sequences found in this patent (in total)

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Download sequences in fasta format: 39 peptides 91 nucleotides

Displaying 1 - 10 of 130 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
18
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308470152
      XM_003097263
      1 of 3 hits reported for Caenorhabditis remanei.
    • Hit length
      4,365 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003097263
      0.41% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:301617512
      XM_002938140
    • Hit length
      1,900 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002938140
      0.95% cov
    • Alignment Length
      18 bp
  • Drosophila sechellia

    Drosophila sechellia

    • Public DB hit
      GI:195340258
      XM_002036697
    • Hit length
      309 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002036697
      5.83% cov
    • Alignment Length
      18 bp
  • Culex quinquefasciatus

    Culex quinquefasciatus

    • Public DB hit
      GI:170052793
      XM_001862348
    • Hit length
      827 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001862348
      2.18% cov
    • Alignment Length
      18 bp
  • Cryptosporidium hominis TU502

    Cryptosporidium hominis TU502

    • Public DB hit
      GI:67581119
      XM_659743
    • Hit length
      387 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_659743
      4.65% cov
    • Alignment Length
      18 bp
  • uncultured bacterium

    uncultured bacterium

    • Public DB hit
      GI:337294962
      FR852462
    • Hit length
      1,006 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FR852462
      1.79% cov
    • Alignment Length
      18 bp
  • Cloning vector pAW8ENdeI-C3HA

    Cloning vector pAW8ENdeI-C3HA

    • Public DB hit
      GI:336089660
      JF340118
    • Hit length
      8,433 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF340118
      0.21% cov
    • Alignment Length
      18 bp
  • Cloning vector pAW8ENdeI-CTAP

    Cloning vector pAW8ENdeI-CTAP

    • Public DB hit
      GI:336089658
      JF340117
    • Hit length
      8,892 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF340117
      0.2% cov
    • Alignment Length
      18 bp
  • Cloning vector pAW8ENdeI-cyEGFP

    Cloning vector pAW8ENdeI-cyEGFP

    • Public DB hit
      GI:336089656
      JF340116
    • Hit length
      9,057 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF340116
      0.2% cov
    • Alignment Length
      18 bp
  • Cloning vector pAW8ENdeI

    Cloning vector pAW8ENdeI

    • Public DB hit
      GI:336089653
      JF340115
    • Hit length
      8,289 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF340115
      0.22% cov
    • Alignment Length
      18 bp
  • Gene deletion vector pEMG

    Gene deletion vector pEMG

    • Public DB hit
      GI:335893243
      JF965437
    • Hit length
      3,168 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF965437
      0.57% cov
    • Alignment Length
      18 bp
  • Cloning vector pBOB

    Cloning vector pBOB

    • Public DB hit
      GI:335355349
      JF927991
    • Hit length
      8,730 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF927991
      0.21% cov
    • Alignment Length
      18 bp
  • Expression vector pLoxGentrc

    Expression vector pLoxGentrc

    • Public DB hit
      GI:334265229
      JF934954
    • Hit length
      6,295 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF934954
      0.29% cov
    • Alignment Length
      18 bp
  • Cloning vector pPLV34

    Cloning vector pPLV34

    • Public DB hit
      GI:334085873
      JF909487
    • Hit length
      5,606 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF909487
      0.32% cov
    • Alignment Length
      18 bp
  • Cloning vector pPLV33

    Cloning vector pPLV33

    • Public DB hit
      GI:334085870
      JF909486
    • Hit length
      5,251 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF909486
      0.34% cov
    • Alignment Length
      18 bp
  • Cloning vector pPLV32

    Cloning vector pPLV32

    • Public DB hit
      GI:334085867
      JF909485
    • Hit length
      4,898 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF909485
      0.37% cov
    • Alignment Length
      18 bp
  • Cloning vector pPLV31

    Cloning vector pPLV31

    • Public DB hit
      GI:334085864
      JF909484
    • Hit length
      9,507 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF909484
      0.19% cov
    • Alignment Length
      18 bp
  • Cloning vector pPLV30

    Cloning vector pPLV30

    • Public DB hit
      GI:334085861
      JF909483
    • Hit length
      9,152 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF909483
      0.2% cov
    • Alignment Length
      18 bp
  • Cloning vector pPLV29

    Cloning vector pPLV29

    • Public DB hit
      GI:334085858
      JF909482
    • Hit length
      8,799 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF909482
      0.2% cov
    • Alignment Length
      18 bp
  • Cloning vector pPLV28

    Cloning vector pPLV28

    • Public DB hit
      GI:334085855
      JF909481
    • Hit length
      6,389 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF909481
      0.28% cov
    • Alignment Length
      18 bp
  • Cloning vector pPLV27

    Cloning vector pPLV27

    • Public DB hit
      GI:334085852
      JF909480
    • Hit length
      6,750 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF909480
      0.27% cov
    • Alignment Length
      18 bp
  • Cloning vector pPLV26

    Cloning vector pPLV26

    • Public DB hit
      GI:334085849
      JF909479
    • Hit length
      6,395 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF909479
      0.28% cov
    • Alignment Length
      18 bp
  • Cloning vector pPLV25

    Cloning vector pPLV25

    • Public DB hit
      GI:334085846
      JF909478
    • Hit length
      6,042 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      JF909478
      0.3% cov
    • Alignment Length
      18 bp
Occurrence
1618 times in PatSeqDB
Tools
SEQ ID NO
2
Length
20
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Plasmodium berghei ANKA

    Plasmodium berghei ANKA

    • Public DB hit
      GI:68059336
      XM_666562
    • Hit length
      827 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_666562
      2.42% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pFA-pHluorin-ARG4

    Cloning vector pFA-pHluorin-ARG4

    • Public DB hit
      GI:336287747
      JN051501
    • Hit length
      5,412 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051501
      0.37% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pFA-pHluorin-URA3

    Cloning vector pFA-pHluorin-URA3

    • Public DB hit
      GI:336287744
      JN051500
    • Hit length
      4,803 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051500
      0.42% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pFA-LIFEACT-GFP-URA3

    Cloning vector pFA-LIFEACT-GFP-URA3

    • Public DB hit
      GI:336287741
      JN051499
    • Hit length
      5,074 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051499
      0.39% cov
    • Alignment Length
      20 bp
  • Cloning vector pFA-TagRFP-T-CdHIS1

    Cloning vector pFA-TagRFP-T-CdHIS1

    • Public DB hit
      GI:336287738
      JN051498
    • Hit length
      4,627 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051498
      0.43% cov
    • Alignment Length
      20 bp
  • Cloning vector pFA-TagRFP-T-CmLEU2

    Cloning vector pFA-TagRFP-T-CmLEU2

    • Public DB hit
      GI:336287735
      JN051497
    • Hit length
      4,822 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051497
      0.41% cov
    • Alignment Length
      20 bp
  • Cloning vector pFA-TagRFP-T-ARG4

    Cloning vector pFA-TagRFP-T-ARG4

    • Public DB hit
      GI:336287732
      JN051496
    • Hit length
      5,433 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051496
      0.37% cov
    • Alignment Length
      20 bp
  • Cloning vector pFA-TagRFP-T-URA3

    Cloning vector pFA-TagRFP-T-URA3

    • Public DB hit
      GI:336287729
      JN051495
    • Hit length
      4,824 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JN051495
      0.41% cov
    • Alignment Length
      20 bp
  • Cloning vector pBOB

    Cloning vector pBOB

    • Public DB hit
      GI:335355349
      JF927991
    • Hit length
      8,730 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF927991
      0.23% cov
    • Alignment Length
      20 bp
  • uncultured Mortierella

    uncultured Mortierella

    • Public DB hit
      GI:334904541
      JF831505
      1 of 2 hits reported for uncultured Mortierella.
    • Hit length
      767 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF831505
      2.61% cov
    • Alignment Length
      20 bp
  • uncultured Trichoderma

    uncultured Trichoderma

    • Public DB hit
      GI:334904520
      JF831474
    • Hit length
      816 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF831474
      2.45% cov
    • Alignment Length
      20 bp
  • Cloning vector pTrypRNAiGate

    Cloning vector pTrypRNAiGate

    • Public DB hit
      GI:334854400
      JF748716
    • Hit length
      9,177 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF748716
      0.22% cov
    • Alignment Length
      20 bp
  • Sebastes schlegelii

    Sebastes schlegelii

    • Public DB hit
      GI:335316739
      HQ712167
    • Hit length
      1,940 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      HQ712167
      1.03% cov
    • Alignment Length
      20 bp
  • Frankia symbiont of Datisca glomerata

    Frankia symbiont of Datisca glomerata

    • Public DB hit
      GI:334861322
      CP002802
    • Hit length
      12,355 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002802
      0.16% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV34

    Cloning vector pPLV34

    • Public DB hit
      GI:334085873
      JF909487
    • Hit length
      5,606 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909487
      0.36% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV33

    Cloning vector pPLV33

    • Public DB hit
      GI:334085870
      JF909486
    • Hit length
      5,251 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909486
      0.38% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV32

    Cloning vector pPLV32

    • Public DB hit
      GI:334085867
      JF909485
    • Hit length
      4,898 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909485
      0.41% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV31

    Cloning vector pPLV31

    • Public DB hit
      GI:334085864
      JF909484
    • Hit length
      9,507 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909484
      0.21% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV30

    Cloning vector pPLV30

    • Public DB hit
      GI:334085861
      JF909483
    • Hit length
      9,152 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909483
      0.22% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV29

    Cloning vector pPLV29

    • Public DB hit
      GI:334085858
      JF909482
    • Hit length
      8,799 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909482
      0.23% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV28

    Cloning vector pPLV28

    • Public DB hit
      GI:334085855
      JF909481
    • Hit length
      6,389 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909481
      0.31% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV27

    Cloning vector pPLV27

    • Public DB hit
      GI:334085852
      JF909480
    • Hit length
      6,750 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909480
      0.3% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV26

    Cloning vector pPLV26

    • Public DB hit
      GI:334085849
      JF909479
    • Hit length
      6,395 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909479
      0.31% cov
    • Alignment Length
      20 bp
  • Cloning vector pPLV25

    Cloning vector pPLV25

    • Public DB hit
      GI:334085846
      JF909478
    • Hit length
      6,042 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909478
      0.33% cov
    • Alignment Length
      20 bp
Occurrence
3926 times in PatSeqDB
Tools
SEQ ID NO
3
Length
25
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
28 times in PatSeqDB
Tools
SEQ ID NO
4
Length
26
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
28 times in PatSeqDB
Tools
SEQ ID NO
5
Length
1,241
Sequence Type
nucleotide
Locations
Detailed Description, Summary
Declared organism
Equine influenza virus H3N8
Determined organism
Occurrence
28 times in PatSeqDB
Tools
SEQ ID NO
6
Length
404
Sequence Type
peptide
Locations
Claims, Detailed Description, Summary
Declared organism
Equine influenza virus H3N8
Determined organism
Occurrence
32 times in PatSeqDB
Tools
SEQ ID NO
7
Length
1,214
Sequence Type
nucleotide
Locations
Detailed Description, Summary
Declared organism
Equine influenza virus H3N8
Determined organism
Occurrence
28 times in PatSeqDB
Tools
SEQ ID NO
8
Length
1,241
Sequence Type
nucleotide
Locations
Detailed Description, Summary
Declared organism
Equine influenza virus H3N8
Determined organism
Occurrence
28 times in PatSeqDB
Tools
SEQ ID NO
9
Length
404
Sequence Type
peptide
Locations
Claims, Detailed Description, Summary
Declared organism
Equine influenza virus H3N8
Determined organism
Occurrence
32 times in PatSeqDB
Tools
SEQ ID NO
10
Length
1,214
Sequence Type
nucleotide
Locations
Detailed Description, Summary
Declared organism
Equine influenza virus H3N8
Determined organism
Occurrence
28 times in PatSeqDB
Tools

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