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Search for Biological Sequences disclosed in Patents

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Data obtained from: EMBL-EBI Pat EPO Sequence Listings
171 sequences found in this patent (in total)

Displaying 1 - 10 of 171 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
166
Type
peptide
Locations
Undetermined

Declared organism:
Chlamydia trachomatis

Determined organism:
  • Chlamydia trachomatis D/UW-3/CX

    Chlamydia trachomatis D/UW-3/CX

    • Public DB hit
      GI:15605521
      NP_220307
    • Hit length
      166 aa
    • E Value
      3.28E-92
    • BLAST Score
      341.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_220307
      100% cov
    • Alignment Length
      166 aa
    • CIGAR string
      166M mismatches: 0 - insertions: 0 - deletions: 0
  • Chlamydia trachomatis 434/Bu

    Chlamydia trachomatis 434/Bu

    • Public DB hit
      GI:166154130
      YP_001654248
    • Hit length
      166 aa
    • E Value
      4.11E-91
    • BLAST Score
      337.8 bits
    • Similarity
      99.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_001654248
      100% cov
    • Alignment Length
      166 aa
    • CIGAR string
      108MN57M mismatches: 1 - insertions: 0 - deletions: 0
  • Chlamydia trachomatis G/11222

    Chlamydia trachomatis G/11222

    • Public DB hit
      GI:296437267
      ADH19437
    • Hit length
      127 aa
    • E Value
      9.86E-68
    • BLAST Score
      260.4 bits
    • Similarity
      100%
    • Coverage
      76.51%
    • Alignment (schematic)

      SEQ ID NO 1
      76.51% cov
      ADH19437
      100% cov
    • Alignment Length
      127 aa
    • CIGAR string
      39H127M mismatches: 0 - insertions: 0 - deletions: 0
  • Chlamydia muridarum str. Nigg

    Chlamydia muridarum str. Nigg

    • Public DB hit
      GI:15834791
      NP_296550
    • Hit length
      166 aa
    • E Value
      1.59E-67
    • BLAST Score
      259.6 bits
    • Similarity
      91.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_296550
      100% cov
    • Alignment Length
      167 aa
  • Chlamydia trachomatis 6276

    Chlamydia trachomatis 6276

    • Public DB hit
      GI:255311622
      ZP_05354192
    • Hit length
      127 aa
    • E Value
      1.01E-66
    • BLAST Score
      256.9 bits
    • Similarity
      99.21%
    • Coverage
      76.51%
    • Alignment (schematic)

      SEQ ID NO 1
      76.51% cov
      ZP_05354192
      100% cov
    • Alignment Length
      127 aa
Occurrence
31 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
20
Type
peptide
Locations
Undetermined

Declared organism:
Chlamydia trachomatis

Determined organism:
  • Chlamydia trachomatis D/UW-3/CX

    Chlamydia trachomatis D/UW-3/CX

    • Public DB hit
      GI:15605521
      NP_220307
    • Hit length
      166 aa
    • E Value
      1.74E-3
    • BLAST Score
      46.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_220307
      12.05% cov
    • Alignment Length
      20 aa
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Chlamydia trachomatis 434/Bu

    Chlamydia trachomatis 434/Bu

    • Public DB hit
      GI:166154130
      YP_001654248
    • Hit length
      166 aa
    • E Value
      1.75E-3
    • BLAST Score
      46.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_001654248
      12.05% cov
    • Alignment Length
      20 aa
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Chlamydia trachomatis G/11222

    Chlamydia trachomatis G/11222

    • Public DB hit
      GI:296437267
      ADH19437
    • Hit length
      127 aa
    • E Value
      2.02E-3
    • BLAST Score
      46.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADH19437
      15.75% cov
    • Alignment Length
      20 aa
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Chlamydia trachomatis 6276

    Chlamydia trachomatis 6276

    • Public DB hit
      GI:255311622
      ZP_05354192
    • Hit length
      127 aa
    • E Value
      2.09E-3
    • BLAST Score
      46.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_05354192
      15.75% cov
    • Alignment Length
      20 aa
  • Chlamydia muridarum str. Nigg

    Chlamydia muridarum str. Nigg

    • Public DB hit
      GI:15834791
      NP_296550
    • Hit length
      166 aa
    • E Value
      1.58E-1
    • BLAST Score
      40 bits
    • Similarity
      90%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_296550
      12.05% cov
    • Alignment Length
      20 aa
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
4
Type
peptide
Locations
Undetermined

Declared organism:
Chlamydia trachomatis

Occurrence
41 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
4
Type
peptide
Locations
Undetermined

Declared organism:
Chlamydia trachomatis

Occurrence
72 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
4
Type
peptide
Locations
Undetermined

Declared organism:
Chlamydia trachomatis

Occurrence
46 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
4
Type
peptide
Locations
Undetermined

Declared organism:
Chlamydia trachomatis

Occurrence
29 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
4
Type
peptide
Locations
Undetermined

Declared organism:
Chlamydia trachomatis

Occurrence
40 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
4
Type
peptide
Locations
Undetermined

Declared organism:
Chlamydia trachomatis

Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
4
Type
peptide
Locations
Undetermined

Declared organism:
Chlamydia trachomatis

Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
4
Type
peptide
Locations
Undetermined

Declared organism:
Chlamydia trachomatis

Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder

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