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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
14 sequences found in this patent (in total)

Displaying 1 - 10 of 14 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
23
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
91 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
23
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332864298
      XM_001135162
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      1,117 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_001135162
      2.06% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332245637
      XM_003271916
    • Hit length
      1,289 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003271916
      1.78% cov
    • Alignment Length
      23 bp
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326913131
      XM_003202847
    • Hit length
      2,713 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003202847
      0.85% cov
    • Alignment Length
      23 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:301601612
      NR_036440
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      1,084 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_036440
      2.12% cov
    • Alignment Length
      23 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297691038
      XR_094635
      1 of 4 hits reported for Pongo abelii.
    • Hit length
      1,374 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XR_094635
      1.67% cov
    • Alignment Length
      23 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296211692
      XM_002752481
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,368 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002752481
      1.68% cov
    • Alignment Length
      23 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:295390144
      NR_033594
      1 of 2 hits reported for Mus musculus.
    • Hit length
      1,040 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_033594
      2.21% cov
    • Alignment Length
      23 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291384154
      XR_084854
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      1,074 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XR_084854
      2.14% cov
    • Alignment Length
      23 bp
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224044219
      XM_002193494
    • Hit length
      2,567 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002193494
      0.9% cov
    • Alignment Length
      23 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:169234975
      NM_001114955
    • Hit length
      1,083 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001114955
      2.12% cov
    • Alignment Length
      23 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:260269517
      NM_001009178
    • Hit length
      1,388 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001009178
      1.66% cov
    • Alignment Length
      23 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:45382672
      NM_205472
    • Hit length
      2,375 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_205472
      0.97% cov
    • Alignment Length
      23 bp
Occurrence
150 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:205361202
      NG_008492
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      12,663 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NG_008492
      0.17% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332825914
      XM_519665
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,886 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_519665
      0.57% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332247564
      XM_003272882
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,873 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003272882
      0.57% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297299108
      XM_001107100
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,696 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_001107100
      0.6% cov
    • Alignment Length
      22 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296221729
      XM_002756830
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,369 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002756830
      0.93% cov
    • Alignment Length
      22 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:295851028
      XR_084882
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      2,212 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XR_084882
      0.99% cov
    • Alignment Length
      22 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197098511
      NM_001133022
    • Hit length
      3,858 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001133022
      0.57% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208966849
      AB463926
      1 of 5 hits reported for synthetic construct.
    • Hit length
      1,646 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB463926
      1.34% cov
    • Alignment Length
      22 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90082127
      AB173283
    • Hit length
      2,345 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB173283
      0.94% cov
    • Alignment Length
      22 bp
Occurrence
94 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:205361202
      NG_008492
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      12,663 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NG_008492
      0.17% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332825914
      XM_519665
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,886 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_519665
      0.57% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297299108
      XM_001107100
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,696 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_001107100
      0.6% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197098511
      NM_001133022
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,858 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001133022
      0.57% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208966849
      AB463926
      1 of 4 hits reported for synthetic construct.
    • Hit length
      1,646 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB463926
      1.34% cov
    • Alignment Length
      22 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90082127
      AB173283
    • Hit length
      2,345 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB173283
      0.94% cov
    • Alignment Length
      22 bp
Occurrence
81 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:184160977
      NG_007553
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      14,631 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NG_007553
      0.15% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843440
      XM_510285
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,705 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_510285
      0.59% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332247387
      XM_003272793
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,431 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003272793
      1.54% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696238
      XM_002825263
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,193 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002825263
      1% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297296093
      XM_001088312
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      1,388 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001088312
      1.59% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:307684627
      AB590199
      1 of 4 hits reported for synthetic construct.
    • Hit length
      1,148 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB590199
      1.92% cov
    • Alignment Length
      22 bp
Occurrence
96 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:184160977
      NG_007553
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      14,631 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NG_007553
      0.15% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335279920
      XM_003353414
      1 of 5 hits reported for Sus scrofa.
    • Hit length
      1,189 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003353414
      1.85% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332247389
      XM_003272794
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      1,195 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003272794
      1.84% cov
    • Alignment Length
      22 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696240
      XM_002825264
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      1,769 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002825264
      1.24% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297296095
      XM_002804710
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      1,364 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002804710
      1.61% cov
    • Alignment Length
      22 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296214270
      XM_002753576
      1 of 6 hits reported for Callithrix jacchus.
    • Hit length
      1,195 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002753576
      1.84% cov
    • Alignment Length
      22 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194206829
      XM_001503650
    • Hit length
      1,330 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001503650
      1.65% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:307684627
      AB590199
    • Hit length
      1,148 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AB590199
      1.92% cov
    • Alignment Length
      22 bp
Occurrence
96 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
25
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819548
      XM_517231
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,098 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_517231
      1.19% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332233177
      XM_003265732
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,022 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003265732
      1.24% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673716
      XM_002814854
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,098 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002814854
      1.19% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4501988
      NM_001134
      1 of 17 hits reported for Homo sapiens.
    • Hit length
      2,032 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001134
      1.23% cov
    • Alignment Length
      25 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:123994854
      DQ894103
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,870 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      DQ894103
      1.34% cov
    • Alignment Length
      25 bp
Occurrence
101 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
25
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:298919218
      NG_023028
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      26,560 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NG_023028
      0.09% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819548
      XM_517231
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      2,098 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_517231
      1.19% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673716
      XM_002814854
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,098 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002814854
      1.19% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297292740
      XM_001103873
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      2,376 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_001103873
      1.05% cov
    • Alignment Length
      25 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:123994854
      DQ894103
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,870 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      DQ894103
      1.34% cov
    • Alignment Length
      25 bp
  • Gorilla gorilla

    Gorilla gorilla

    • Public DB hit
      GI:817963
      M38272
    • Hit length
      26,833 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      M38272
      0.09% cov
    • Alignment Length
      25 bp
Occurrence
101 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
23
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:193211392
      NG_008108
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      37,632 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NG_008108
      0.06% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Neophocaena phocaenoides

    Neophocaena phocaenoides

    • Public DB hit
      GI:224549517
      FJ176356
    • Hit length
      382 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      FJ176356
      6.02% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Physeter catodon

    Physeter catodon

    • Public DB hit
      GI:118201590
      EF087955
    • Hit length
      344 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      EF087955
      6.69% cov
    • Alignment Length
      23 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818349
      XM_516875
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,877 bp
    • E Value
      8.59E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 9
      95.65% cov
      XM_516875
      0.57% cov
    • Alignment Length
      22 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332214754
      XM_003256452
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,876 bp
    • E Value
      8.59E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 9
      95.65% cov
      XM_003256452
      0.57% cov
    • Alignment Length
      22 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297672475
      XM_002814276
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,773 bp
    • E Value
      8.59E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 9
      95.65% cov
      XM_002814276
      0.58% cov
    • Alignment Length
      22 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296227569
      XM_002759385
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,622 bp
    • E Value
      8.59E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 9
      95.65% cov
      XM_002759385
      1.36% cov
    • Alignment Length
      22 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:157073967
      NM_001103222
      1 of 2 hits reported for Bos taurus.
    • Hit length
      2,725 bp
    • E Value
      8.59E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 9
      95.65% cov
      NM_001103222
      0.81% cov
    • Alignment Length
      22 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:146198736
      NM_001081879
    • Hit length
      1,922 bp
    • E Value
      8.59E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 9
      95.65% cov
      NM_001081879
      1.14% cov
    • Alignment Length
      22 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:148236168
      NM_001097417
    • Hit length
      1,946 bp
    • E Value
      8.59E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 9
      95.65% cov
      NM_001097417
      1.13% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261859323
      AB528020
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,589 bp
    • E Value
      8.59E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 9
      95.65% cov
      AB528020
      1.38% cov
    • Alignment Length
      22 bp
Occurrence
36 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
20
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:193211392
      NG_008108
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      37,632 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NG_008108
      0.05% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332818349
      XM_516875
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,877 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_516875
      0.52% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332214754
      XM_003256452
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,876 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003256452
      0.52% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297672475
      XM_002814276
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,773 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002814276
      0.53% cov
    • Alignment Length
      20 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:157073967
      NM_001103222
    • Hit length
      2,725 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 10
      95% cov
      NM_001103222
      0.7% cov
    • Alignment Length
      19 bp
Occurrence
36 times in PatSeqDB
Tools
PatSeq Finder

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