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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
10 sequences found in this patent (in total)

Displaying 1 - 10 of 10 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
2,962
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Not specified

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:3445467
      AJ006519
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      2,962 bp
    • E Value
      0E0
    • BLAST Score
      5,470.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AJ006519
      100% cov
    • Alignment Length
      2,962 bp
    • CIGAR string
      2962M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262325
      XM_001102636
    • Hit length
      3,820 bp
    • E Value
      0E0
    • BLAST Score
      2,222.6 bits
    • Similarity
      85.1%
    • Coverage
      75.12%
    • Alignment (schematic)

      SEQ ID NO 1
      75.12% cov
      XM_001102636
      58.17% cov
    • Alignment Length
      2,282 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114644824
      XM_001155207
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,947 bp
    • E Value
      0E0
    • BLAST Score
      2,218.9 bits
    • Similarity
      85.06%
    • Coverage
      75.12%
    • Alignment (schematic)

      SEQ ID NO 1
      75.12% cov
      XM_001155207
      56.35% cov
    • Alignment Length
      2,283 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21536348
      NM_001095
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      3,785 bp
    • E Value
      0E0
    • BLAST Score
      2,218.9 bits
    • Similarity
      85.06%
    • Coverage
      75.12%
    • Alignment (schematic)

      SEQ ID NO 1
      75.12% cov
      NM_001095
      58.76% cov
    • Alignment Length
      2,283 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296211623
      XM_002807101
    • Hit length
      3,783 bp
    • E Value
      0E0
    • BLAST Score
      2,169.1 bits
    • Similarity
      84.71%
    • Coverage
      75.12%
    • Alignment (schematic)

      SEQ ID NO 1
      75.12% cov
      XM_002807101
      58.79% cov
    • Alignment Length
      2,289 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
2
Length
513
Type
peptide
Locations
Claims, Fulltext

Declared organism:
Not specified

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:14799389
      CAC44267
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      559 aa
    • E Value
      0E0
    • BLAST Score
      1,068.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CAC44267
      91.77% cov
    • Alignment Length
      513 aa
    • CIGAR string
      81MN431M mismatches: 1 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:63003141
      BAD97849
      1 of 3 hits reported for Mus musculus.
    • Hit length
      559 aa
    • E Value
      0E0
    • BLAST Score
      1,050 bits
    • Similarity
      99.61%
    • Coverage
      99.42%
    • Alignment (schematic)

      SEQ ID NO 2
      99.42% cov
      BAD97849
      91.06% cov
    • Alignment Length
      510 aa
    • CIGAR string
      3HMN6MD69MN380MN50M mismatches: 3 - insertions: 0 - deletions: 1
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73996447
      XP_850400
    • Hit length
      559 aa
    • E Value
      0E0
    • BLAST Score
      1,020.8 bits
    • Similarity
      98.21%
    • Coverage
      98.05%
    • Alignment (schematic)

      SEQ ID NO 2
      98.05% cov
      XP_850400
      89.98% cov
    • Alignment Length
      503 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310947497
      ADP44689
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      562 aa
    • E Value
      0E0
    • BLAST Score
      1,013.1 bits
    • Similarity
      97.06%
    • Coverage
      99.22%
    • Alignment (schematic)

      SEQ ID NO 2
      99.22% cov
      ADP44689
      90.75% cov
    • Alignment Length
      511 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297691798
      XP_002823266
    • Hit length
      991 aa
    • E Value
      0E0
    • BLAST Score
      978.8 bits
    • Similarity
      93.46%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 2
      99.03% cov
      XP_002823266
      52.37% cov
    • Alignment Length
      520 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301774014
      XP_002922431
    • Hit length
      526 aa
    • E Value
      0E0
    • BLAST Score
      837 bits
    • Similarity
      83.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002922431
      100% cov
    • Alignment Length
      526 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291389117
      XP_002711188
    • Hit length
      526 aa
    • E Value
      0E0
    • BLAST Score
      835.9 bits
    • Similarity
      83.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002711188
      100% cov
    • Alignment Length
      526 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335287759
      XP_003126177
    • Hit length
      610 aa
    • E Value
      0E0
    • BLAST Score
      835.1 bits
    • Similarity
      96.89%
    • Coverage
      81.48%
    • Alignment (schematic)

      SEQ ID NO 2
      81.48% cov
      XP_003126177
      68.52% cov
    • Alignment Length
      418 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:300793750
      NP_001179862
    • Hit length
      526 aa
    • E Value
      0E0
    • BLAST Score
      833.2 bits
    • Similarity
      83.27%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001179862
      100% cov
    • Alignment Length
      526 aa
Occurrence
Tools
PatSeq Finder
SEQ ID NO
3
Length
960
Type
DNA
Locations
Claims, Fulltext

Declared organism:
Not specified

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:140970991
      NM_024154
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      3,771 bp
    • E Value
      0E0
    • BLAST Score
      1,310.4 bits
    • Similarity
      100%
    • Coverage
      73.85%
    • Alignment (schematic)

      SEQ ID NO 3
      73.85% cov
      NM_024154
      18.8% cov
    • Alignment Length
      709 bp
    • CIGAR string
      709M251H mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:45433492
      NM_009597
    • Hit length
      3,800 bp
    • E Value
      0E0
    • BLAST Score
      1,157.1 bits
    • Similarity
      96.18%
    • Coverage
      73.65%
    • Alignment (schematic)

      SEQ ID NO 3
      73.65% cov
      NM_009597
      18.61% cov
    • Alignment Length
      707 bp
    • CIGAR string
      6MN55MN20MN62MN65MN17MN5MN29MN5MN2MN5MN11MN44MN32MN32MN29MN32MN14MN5MN2MN14MN17MN23MN17MN14MN65MN38MN20M253H mismatches: 27 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332206269
      XR_120758
    • Hit length
      3,739 bp
    • E Value
      0E0
    • BLAST Score
      989.1 bits
    • Similarity
      85.47%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XR_120758
      25.73% cov
    • Alignment Length
      977 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114644824
      XM_001155207
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      3,947 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      91.37%
    • Coverage
      73.65%
    • Alignment (schematic)

      SEQ ID NO 3
      73.65% cov
      XM_001155207
      17.91% cov
    • Alignment Length
      707 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21536350
      NM_020039
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      3,923 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      91.37%
    • Coverage
      73.65%
    • Alignment (schematic)

      SEQ ID NO 3
      73.65% cov
      NM_020039
      18.02% cov
    • Alignment Length
      707 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301774013
      XM_002922385
    • Hit length
      1,581 bp
    • E Value
      0E0
    • BLAST Score
      957.7 bits
    • Similarity
      91.1%
    • Coverage
      73.65%
    • Alignment (schematic)

      SEQ ID NO 3
      73.65% cov
      XM_002922385
      44.72% cov
    • Alignment Length
      708 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296211623
      XM_002807101
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      3,783 bp
    • E Value
      0E0
    • BLAST Score
      952.1 bits
    • Similarity
      90.95%
    • Coverage
      73.65%
    • Alignment (schematic)

      SEQ ID NO 3
      73.65% cov
      XM_002807101
      18.69% cov
    • Alignment Length
      707 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194211970
      XM_001915905
    • Hit length
      4,504 bp
    • E Value
      0E0
    • BLAST Score
      952.1 bits
    • Similarity
      91.16%
    • Coverage
      73.02%
    • Alignment (schematic)

      SEQ ID NO 3
      73.02% cov
      XM_001915905
      15.56% cov
    • Alignment Length
      701 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
4
Length
319
Type
peptide
Locations
Claims, Fulltext

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:148672171
      EDL04118
      1 of 2 hits reported for Mus musculus.
    • Hit length
      527 aa
    • E Value
      1.2E-137
    • BLAST Score
      494.6 bits
    • Similarity
      100%
    • Coverage
      73.98%
    • Alignment (schematic)

      SEQ ID NO 4
      73.98% cov
      EDL04118
      44.78% cov
    • Alignment Length
      236 aa
    • CIGAR string
      236M83H mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13162349
      NP_077068
    • Hit length
      526 aa
    • E Value
      1.41E-137
    • BLAST Score
      494.2 bits
    • Similarity
      100%
    • Coverage
      73.98%
    • Alignment (schematic)

      SEQ ID NO 4
      73.98% cov
      NP_077068
      44.87% cov
    • Alignment Length
      236 aa
    • CIGAR string
      236M83H mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194211971
      XP_001915940
    • Hit length
      913 aa
    • E Value
      8.44E-136
    • BLAST Score
      488.4 bits
    • Similarity
      98.73%
    • Coverage
      73.98%
    • Alignment (schematic)

      SEQ ID NO 4
      73.98% cov
      XP_001915940
      25.85% cov
    • Alignment Length
      236 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:158261043
      BAF82699
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      528 aa
    • E Value
      1.06E-134
    • BLAST Score
      484.6 bits
    • Similarity
      98.73%
    • Coverage
      73.98%
    • Alignment (schematic)

      SEQ ID NO 4
      73.98% cov
      BAF82699
      44.7% cov
    • Alignment Length
      236 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301774014
      XP_002922431
    • Hit length
      526 aa
    • E Value
      1.29E-134
    • BLAST Score
      484.6 bits
    • Similarity
      98.73%
    • Coverage
      73.98%
    • Alignment (schematic)

      SEQ ID NO 4
      73.98% cov
      XP_002922431
      44.87% cov
    • Alignment Length
      236 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296211624
      XP_002807147
    • Hit length
      528 aa
    • E Value
      1.39E-134
    • BLAST Score
      484.2 bits
    • Similarity
      98.73%
    • Coverage
      73.98%
    • Alignment (schematic)

      SEQ ID NO 4
      73.98% cov
      XP_002807147
      44.7% cov
    • Alignment Length
      236 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291389117
      XP_002711188
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      526 aa
    • E Value
      1.48E-134
    • BLAST Score
      484.2 bits
    • Similarity
      98.73%
    • Coverage
      73.98%
    • Alignment (schematic)

      SEQ ID NO 4
      73.98% cov
      XP_002711188
      44.87% cov
    • Alignment Length
      236 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:300793750
      NP_001179862
    • Hit length
      526 aa
    • E Value
      4.4E-134
    • BLAST Score
      482.6 bits
    • Similarity
      98.73%
    • Coverage
      73.98%
    • Alignment (schematic)

      SEQ ID NO 4
      73.98% cov
      NP_001179862
      44.87% cov
    • Alignment Length
      236 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262328
      XP_002798614
    • Hit length
      574 aa
    • E Value
      4.79E-134
    • BLAST Score
      482.6 bits
    • Similarity
      98.73%
    • Coverage
      73.98%
    • Alignment (schematic)

      SEQ ID NO 4
      73.98% cov
      XP_002798614
      41.11% cov
    • Alignment Length
      236 aa
Occurrence
Tools
PatSeq Finder
SEQ ID NO
5
Length
526
Type
peptide
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13162349
      NP_077068
    • Hit length
      526 aa
    • E Value
      0E0
    • BLAST Score
      1,101.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_077068
      100% cov
    • Alignment Length
      526 aa
    • CIGAR string
      526M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:45433493
      NP_033727
      1 of 2 hits reported for Mus musculus.
    • Hit length
      526 aa
    • E Value
      0E0
    • BLAST Score
      1,100.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_033727
      100% cov
    • Alignment Length
      526 aa
    • CIGAR string
      475MN50M mismatches: 1 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301774014
      XP_002922431
    • Hit length
      526 aa
    • E Value
      0E0
    • BLAST Score
      1,085.9 bits
    • Similarity
      99.05%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002922431
      100% cov
    • Alignment Length
      526 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291389117
      XP_002711188
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      526 aa
    • E Value
      0E0
    • BLAST Score
      1,085.5 bits
    • Similarity
      99.05%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002711188
      100% cov
    • Alignment Length
      526 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:300793750
      NP_001179862
    • Hit length
      526 aa
    • E Value
      0E0
    • BLAST Score
      1,081.2 bits
    • Similarity
      98.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001179862
      100% cov
    • Alignment Length
      526 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21536349
      NP_001086
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      528 aa
    • E Value
      0E0
    • BLAST Score
      1,080.9 bits
    • Similarity
      98.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001086
      100% cov
    • Alignment Length
      528 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296211624
      XP_002807147
    • Hit length
      528 aa
    • E Value
      0E0
    • BLAST Score
      1,073.5 bits
    • Similarity
      97.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002807147
      100% cov
    • Alignment Length
      528 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262328
      XP_002798614
    • Hit length
      574 aa
    • E Value
      0E0
    • BLAST Score
      1,055.4 bits
    • Similarity
      90.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002798614
      100% cov
    • Alignment Length
      574 aa
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
28
Type
DNA
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:3445467
      AJ006519
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      2,962 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AJ006519
      0.95% cov
    • Alignment Length
      28 bp
    • CIGAR string
      28M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
Tools
PatSeq Finder
SEQ ID NO
7
Length
23
Type
DNA
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:140970991
      NM_024154
      1 of 5 hits reported for Rattus norvegicus.
    • Hit length
      3,771 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_024154
      0.61% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326936464
      XM_003214226
    • Hit length
      1,643 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003214226
      1.4% cov
    • Alignment Length
      23 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297691797
      XM_002823220
    • Hit length
      4,948 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002823220
      0.46% cov
    • Alignment Length
      23 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262327
      XM_002798568
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,958 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002798568
      0.58% cov
    • Alignment Length
      23 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296211623
      XM_002807101
    • Hit length
      3,783 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002807101
      0.61% cov
    • Alignment Length
      23 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291405563
      XM_002719224
      1 of 3 hits reported for Oryctolagus cuniculus.
    • Hit length
      1,539 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002719224
      1.49% cov
    • Alignment Length
      23 bp
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224099058
      XM_002193294
    • Hit length
      1,642 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002193294
      1.4% cov
    • Alignment Length
      23 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:239049298
      NM_214790
    • Hit length
      2,011 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_214790
      1.14% cov
    • Alignment Length
      23 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114644824
      XM_001155207
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,947 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_001155207
      0.58% cov
    • Alignment Length
      23 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:94957760
      NM_001040467
    • Hit length
      1,590 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001040467
      1.45% cov
    • Alignment Length
      23 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21536350
      NM_020039
    • Hit length
      3,923 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_020039
      0.59% cov
    • Alignment Length
      23 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
8
Length
23
Type
DNA
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335287758
      XM_003126129
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      1,833 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003126129
      1.25% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:300793749
      NM_001192933
      1 of 4 hits reported for Bos taurus.
    • Hit length
      2,037 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001192933
      1.13% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194211970
      XM_001915905
      1 of 2 hits reported for Equus caballus.
    • Hit length
      4,504 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_001915905
      0.51% cov
    • Alignment Length
      23 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:140970991
      NM_024154
      1 of 6 hits reported for Rattus norvegicus.
    • Hit length
      3,771 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_024154
      0.61% cov
    • Alignment Length
      23 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332206269
      XR_120758
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,739 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_120758
      0.62% cov
    • Alignment Length
      23 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262327
      XM_002798568
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,958 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002798568
      0.58% cov
    • Alignment Length
      23 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296211623
      XM_002807101
    • Hit length
      3,783 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002807101
      0.61% cov
    • Alignment Length
      23 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114644824
      XM_001155207
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,947 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_001155207
      0.58% cov
    • Alignment Length
      23 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21536350
      NM_020039
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      3,923 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_020039
      0.59% cov
    • Alignment Length
      23 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73996446
      XM_845307
    • Hit length
      1,680 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_845307
      1.37% cov
    • Alignment Length
      23 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
9
Length
24
Type
DNA
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:140970991
      NM_024154
      1 of 5 hits reported for Rattus norvegicus.
    • Hit length
      3,771 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_024154
      0.64% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326936464
      XM_003214226
      1 of 2 hits reported for Meleagris gallopavo.
    • Hit length
      1,643 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003214226
      1.46% cov
    • Alignment Length
      24 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301774013
      XM_002922385
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,581 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002922385
      1.52% cov
    • Alignment Length
      24 bp
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224099058
      XM_002193294
      1 of 2 hits reported for Taeniopygia guttata.
    • Hit length
      1,642 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002193294
      1.46% cov
    • Alignment Length
      24 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194211970
      XM_001915905
      1 of 2 hits reported for Equus caballus.
    • Hit length
      4,504 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_001915905
      0.53% cov
    • Alignment Length
      24 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:94957760
      NM_001040467
      1 of 2 hits reported for Gallus gallus.
    • Hit length
      1,590 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001040467
      1.51% cov
    • Alignment Length
      24 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:45433492
      NM_009597
      1 of 5 hits reported for Mus musculus.
    • Hit length
      3,800 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_009597
      0.63% cov
    • Alignment Length
      24 bp
  • Drosophila virilis

    Drosophila virilis

    • Public DB hit
      GI:195387805
      XM_002052547
    • Hit length
      1,638 bp
    • E Value
      6.63E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      95.83%
    • Alignment (schematic)

      SEQ ID NO 9
      95.83% cov
      XM_002052547
      1.4% cov
    • Alignment Length
      23 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
10
Length
23
Type
DNA
Locations
Fulltext

Declared organism:
Not specified

Determined organism:
Occurrence
Tools
PatSeq Finder

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