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Search for Biological Sequences disclosed in Patents

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Data obtained from: EPO Sequence Listings
65 sequences found in this patent (in total)

Displaying 1 - 10 of 65 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
3,147
Type
DNA
Locations
Undetermined

Declared organism:
Anaplasma phagocytophilum

Determined organism:
  • Anaplasma phagocytophilum str. HZ

    Anaplasma phagocytophilum str. HZ

    • Public DB hit
      GI:88597753
      CP000235
    • Hit length
      1,471,282 bp
    • E Value
      0E0
    • BLAST Score
      5,781.1 bits
    • Similarity
      99.97%
    • Coverage
      99.56%
    • Alignment (schematic)

      SEQ ID NO 1
      99.56% cov
      CP000235
      0.21% cov
    • Alignment Length
      3,133 bp
    • CIGAR string
      7H2350MN782M7H mismatches: 1 - insertions: 0 - deletions: 0
  • Anaplasma phagocytophilum

    Anaplasma phagocytophilum

    • Public DB hit
      GI:3033495
      AF020522
    • Hit length
      3,130 bp
    • E Value
      0E0
    • BLAST Score
      5,775.6 bits
    • Similarity
      99.97%
    • Coverage
      99.46%
    • Alignment (schematic)

      SEQ ID NO 1
      99.46% cov
      AF020522
      100% cov
    • Alignment Length
      3,130 bp
    • CIGAR string
      10H2347MN782M7H mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
619
Type
peptide
Locations
Undetermined

Declared organism:
Anaplasma phagocytophilum

Determined organism:
  • Anaplasma phagocytophilum str. HZ

    Anaplasma phagocytophilum str. HZ

    • Public DB hit
      GI:88607403
      YP_504667
    • Hit length
      619 aa
    • E Value
      0E0
    • BLAST Score
      1,223.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_504667
      100% cov
    • Alignment Length
      619 aa
    • CIGAR string
      619M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
4,724
Type
DNA
Locations
Undetermined

Declared organism:
Anaplasma phagocytophilum

Determined organism:
  • Anaplasma phagocytophilum

    Anaplasma phagocytophilum

    • Public DB hit
      GI:4335699
      AF020521
      1 of 23 hits reported for Anaplasma phagocytophilum.
    • Hit length
      4,691 bp
    • E Value
      0E0
    • BLAST Score
      8,582.5 bits
    • Similarity
      99.68%
    • Coverage
      99.36%
    • Alignment (schematic)

      SEQ ID NO 3
      99.36% cov
      AF020521
      100% cov
    • Alignment Length
      4,698 bp
    • CIGAR string
      30H22MD2MD138MN32MI304MD18MD4MD177MI75MN55MD194MI317MD151MI240MN1106MN1848M mismatches: 4 - insertions: 4 - deletions: 7
  • Anaplasma phagocytophilum str. HZ

    Anaplasma phagocytophilum str. HZ

    • Public DB hit
      GI:88597753
      CP000235
    • Hit length
      1,471,282 bp
    • E Value
      0E0
    • BLAST Score
      8,536.3 bits
    • Similarity
      99.47%
    • Coverage
      99.47%
    • Alignment (schematic)

      SEQ ID NO 3
      99.47% cov
      CP000235
      0.32% cov
    • Alignment Length
      4,706 bp
    • CIGAR string
      25H27MD2MD138MN32MI304MD18MD4MD177MI75MN55MD194MI317MD151MI240MN1106MN1286M2N14MD12MI5MN15MI89M2D74MN48MI298M mismatches: 8 - insertions: 7 - deletions: 10
  • Ehrlichia sp. 'CGE agent'

    Ehrlichia sp. 'CGE agent'

    • Public DB hit
      GI:7229258
      AF100894
    • Hit length
      3,740 bp
    • E Value
      0E0
    • BLAST Score
      6,457 bits
    • Similarity
      97.81%
    • Coverage
      79.25%
    • Alignment (schematic)

      SEQ ID NO 3
      79.25% cov
      AF100894
      100% cov
    • Alignment Length
      3,751 bp
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
748
Type
peptide
Locations
Undetermined

Declared organism:
Anaplasma phagocytophilum

Determined organism:
  • Ehrlichia sp.

    Ehrlichia sp.

    • Public DB hit
      GI:7514261
      T08612
    • Hit length
      748 aa
    • E Value
      0E0
    • BLAST Score
      1,523.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      T08612
      100% cov
    • Alignment Length
      748 aa
    • CIGAR string
      748M mismatches: 0 - insertions: 0 - deletions: 0
  • Anaplasma phagocytophilum str. HZ

    Anaplasma phagocytophilum str. HZ

    • Public DB hit
      GI:88607707
      YP_505319
      1 of 2 hits reported for Anaplasma phagocytophilum str. HZ.
    • Hit length
      1,232 aa
    • E Value
      0E0
    • BLAST Score
      1,522.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_505319
      60.71% cov
    • Alignment Length
      748 aa
    • CIGAR string
      748M mismatches: 0 - insertions: 0 - deletions: 0
  • Anaplasma phagocytophilum

    Anaplasma phagocytophilum

    • Public DB hit
      GI:7229241
      AAF42724
      1 of 22 hits reported for Anaplasma phagocytophilum.
    • Hit length
      1,232 aa
    • E Value
      0E0
    • BLAST Score
      1,522.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAF42724
      60.71% cov
    • Alignment Length
      748 aa
    • CIGAR string
      748M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
3,998
Type
DNA
Locations
Undetermined

Declared organism:
Anaplasma phagocytophilum

Determined organism:
  • Anaplasma phagocytophilum str. HZ

    Anaplasma phagocytophilum str. HZ

    • Public DB hit
      GI:88597753
      CP000235
    • Hit length
      1,471,282 bp
    • E Value
      0E0
    • BLAST Score
      7,291.7 bits
    • Similarity
      99.9%
    • Coverage
      99.05%
    • Alignment (schematic)

      SEQ ID NO 5
      99.05% cov
      CP000235
      0.27% cov
    • Alignment Length
      3,960 bp
    • CIGAR string
      7H1053MN626MN191MN5MN2081M31H mismatches: 4 - insertions: 0 - deletions: 0
  • Anaplasma phagocytophilum

    Anaplasma phagocytophilum

    • Public DB hit
      GI:3033497
      AF020523
    • Hit length
      3,950 bp
    • E Value
      0E0
    • BLAST Score
      7,278.8 bits
    • Similarity
      99.92%
    • Coverage
      98.8%
    • Alignment (schematic)

      SEQ ID NO 5
      98.8% cov
      AF020523
      100% cov
    • Alignment Length
      3,950 bp
    • CIGAR string
      10H1677MN191MN5MN2074M38H mismatches: 3 - insertions: 0 - deletions: 0
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
578
Type
peptide
Locations
Undetermined

Declared organism:
Anaplasma phagocytophilum

Determined organism:
  • Anaplasma phagocytophilum

    Anaplasma phagocytophilum

    • Public DB hit
      GI:3033498
      AAC12864
    • Hit length
      578 aa
    • E Value
      0E0
    • BLAST Score
      1,100.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAC12864
      100% cov
    • Alignment Length
      578 aa
    • CIGAR string
      578M mismatches: 0 - insertions: 0 - deletions: 0
  • Anaplasma phagocytophilum str. HZ

    Anaplasma phagocytophilum str. HZ

    • Public DB hit
      GI:88607748
      YP_505886
    • Hit length
      578 aa
    • E Value
      0E0
    • BLAST Score
      1,096.6 bits
    • Similarity
      99.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      YP_505886
      100% cov
    • Alignment Length
      578 aa
    • CIGAR string
      276MN301M mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
5,578
Type
DNA
Locations
Undetermined

Declared organism:
Anaplasma phagocytophilum

Determined organism:
  • Anaplasma phagocytophilum str. HZ

    Anaplasma phagocytophilum str. HZ

    • Public DB hit
      GI:88597753
      CP000235
    • Hit length
      1,471,282 bp
    • E Value
      0E0
    • BLAST Score
      5,812.5 bits
    • Similarity
      99.32%
    • Coverage
      57.64%
    • Alignment (schematic)

      SEQ ID NO 7
      57.64% cov
      CP000235
      0.22% cov
    • Alignment Length
      3,215 bp
    • CIGAR string
      1189H7MN5MN13M2N5MN3MN6MN5MN2MN61MN8MDNM2DN211MN150MN319M2N51MN929MN1210MN207M1174H mismatches: 19 - insertions: 0 - deletions: 3
  • Anaplasma phagocytophilum

    Anaplasma phagocytophilum

    • Public DB hit
      GI:3033495
      AF020522
      1 of 24 hits reported for Anaplasma phagocytophilum.
    • Hit length
      3,130 bp
    • E Value
      0E0
    • BLAST Score
      2,750.8 bits
    • Similarity
      96.91%
    • Coverage
      29.47%
    • Alignment (schematic)

      SEQ ID NO 7
      29.47% cov
      AF020522
      52.43% cov
    • Alignment Length
      1,652 bp
    • CIGAR string
      7H246MN79MN1051MN7MN3MN43MN2MNMND4MD3MNM2IMN6M3I3MN25MN3MN8MIMD8M3NM3D6MN11MN2MNMNI4MI3MNM2DMN6M3D3MN17MN6MNMN5MN17MNMN11MNMNMN7M3927H mismatches: 32 - insertions: 8 - deletions: 11
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
484
Type
peptide
Locations
Undetermined

Declared organism:
Anaplasma phagocytophilum

Determined organism:
  • Anaplasma phagocytophilum str. HZ

    Anaplasma phagocytophilum str. HZ

    • Public DB hit
      GI:88607403
      YP_504667
    • Hit length
      619 aa
    • E Value
      0E0
    • BLAST Score
      855.9 bits
    • Similarity
      89.64%
    • Coverage
      96.69%
    • Alignment (schematic)

      SEQ ID NO 8
      96.69% cov
      YP_504667
      80.78% cov
    • Alignment Length
      502 aa
    • CIGAR string
      377MN2M2N8M34I21MN2M2N14M7NMD2N8MNMNMN3MND3M2N2M2N16H mismatches: 23 - insertions: 34 - deletions: 2
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
33
Type
peptide
Locations
Undetermined

Declared organism:
Anaplasma phagocytophilum

Determined organism:
  • Ehrlichia sp.

    Ehrlichia sp.

    • Public DB hit
      GI:7514261
      T08612
    • Hit length
      748 aa
    • E Value
      2.75E-11
    • BLAST Score
      72.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      T08612
      4.41% cov
    • Alignment Length
      33 aa
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
  • Anaplasma phagocytophilum str. HZ

    Anaplasma phagocytophilum str. HZ

    • Public DB hit
      GI:88607707
      YP_505319
      1 of 2 hits reported for Anaplasma phagocytophilum str. HZ.
    • Hit length
      1,232 aa
    • E Value
      3.65E-11
    • BLAST Score
      72.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_505319
      2.68% cov
    • Alignment Length
      33 aa
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
  • Anaplasma phagocytophilum

    Anaplasma phagocytophilum

    • Public DB hit
      GI:7229241
      AAF42724
      1 of 22 hits reported for Anaplasma phagocytophilum.
    • Hit length
      1,232 aa
    • E Value
      3.65E-11
    • BLAST Score
      72.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AAF42724
      2.68% cov
    • Alignment Length
      33 aa
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
33
Type
peptide
Locations
Undetermined

Declared organism:
Anaplasma phagocytophilum

Determined organism:
  • Ehrlichia sp.

    Ehrlichia sp.

    • Public DB hit
      GI:7514261
      T08612
    • Hit length
      748 aa
    • E Value
      2.77E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      T08612
      4.41% cov
    • Alignment Length
      33 aa
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
  • Anaplasma phagocytophilum str. HZ

    Anaplasma phagocytophilum str. HZ

    • Public DB hit
      GI:88607707
      YP_505319
      1 of 2 hits reported for Anaplasma phagocytophilum str. HZ.
    • Hit length
      1,232 aa
    • E Value
      3.22E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      YP_505319
      2.68% cov
    • Alignment Length
      33 aa
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
  • Anaplasma phagocytophilum

    Anaplasma phagocytophilum

    • Public DB hit
      GI:7229241
      AAF42724
      1 of 22 hits reported for Anaplasma phagocytophilum.
    • Hit length
      1,232 aa
    • E Value
      3.22E-9
    • BLAST Score
      65.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAF42724
      2.68% cov
    • Alignment Length
      33 aa
    • CIGAR string
      33M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder

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