Loading...

Search for Biological Sequences disclosed in Patents

Discover PatSeq Finder: Search and analyse similar sequence matches in the Lens PatSeq database effortlessly using PatSeq Finder. Scan 480M+ biological sequences disclosed in patents on a privacy-assured platform and give your IP strategy the edge.

View PatSeq Dismiss
Data obtained from: WIPO-PCT
1,039 sequences found in this patent (in total)

Displaying 1 - 10 of 1,039 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
5,120
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:119709831
      NM_002335
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      5,161 bp
    • E Value
      0E0
    • BLAST Score
      9,432 bits
    • Similarity
      99.96%
    • Coverage
      99.86%
    • Alignment (schematic)

      SEQ ID NO 1
      99.86% cov
      NM_002335
      99.07% cov
    • Alignment Length
      5,113 bp
    • CIGAR string
      7H1709MN2341MN1061M mismatches: 2 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114638793
      XM_508605
    • Hit length
      5,311 bp
    • E Value
      0E0
    • BLAST Score
      9,038.6 bits
    • Similarity
      99.56%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 1
      96.88% cov
      XM_508605
      93.39% cov
    • Alignment Length
      4,960 bp
    • CIGAR string
      160H584MN212MN137MN443MN80MN206MN41MN194MN17MN1112MN8MN68MN279MNMN122MN251MN11MN50MN64MN192MN536MN62MN268M mismatches: 22 - insertions: 0 - deletions: 0
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:206725494
      NM_001135199
    • Hit length
      5,163 bp
    • E Value
      0E0
    • BLAST Score
      8,486.5 bits
    • Similarity
      96.5%
    • Coverage
      99.82%
    • Alignment (schematic)

      SEQ ID NO 1
      99.82% cov
      NM_001135199
      98.78% cov
    • Alignment Length
      5,115 bp
    • CIGAR string
      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 mismatches: 160 - insertions: 4 - deletions: 15
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296218978
      XM_002755640
    • Hit length
      5,233 bp
    • E Value
      0E0
    • BLAST Score
      7,814.3 bits
    • Similarity
      95.11%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 1
      96.88% cov
      XM_002755640
      94.78% cov
    • Alignment Length
      4,966 bp
    • CIGAR string
      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 mismatches: 231 - insertions: 6 - deletions: 6
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297492243
      XM_002699405
      1 of 4 hits reported for Bos taurus.
    • Hit length
      5,648 bp
    • E Value
      0E0
    • BLAST Score
      6,721.1 bits
    • Similarity
      91.15%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 1
      96.88% cov
      XM_002699405
      87.78% cov
    • Alignment Length
      4,970 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194218563
      XM_001916973
    • Hit length
      4,872 bp
    • E Value
      0E0
    • BLAST Score
      6,577 bits
    • Similarity
      91.64%
    • Coverage
      92.93%
    • Alignment (schematic)

      SEQ ID NO 1
      92.93% cov
      XM_001916973
      97.66% cov
    • Alignment Length
      4,773 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:253314535
      NM_008513
      1 of 5 hits reported for Mus musculus.
    • Hit length
      5,172 bp
    • E Value
      0E0
    • BLAST Score
      5,746 bits
    • Similarity
      87.05%
    • Coverage
      99.86%
    • Alignment (schematic)

      SEQ ID NO 1
      99.86% cov
      NM_008513
      98.7% cov
    • Alignment Length
      5,141 bp
Occurrence
36 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
5,120
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:119709831
      NM_002335
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      5,161 bp
    • E Value
      0E0
    • BLAST Score
      9,426.4 bits
    • Similarity
      99.94%
    • Coverage
      99.86%
    • Alignment (schematic)

      SEQ ID NO 2
      99.86% cov
      NM_002335
      99.07% cov
    • Alignment Length
      5,113 bp
    • CIGAR string
      7H574MN1134MN2341MN1061M mismatches: 3 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114638793
      XM_508605
    • Hit length
      5,311 bp
    • E Value
      0E0
    • BLAST Score
      9,033.1 bits
    • Similarity
      99.54%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 2
      96.88% cov
      XM_508605
      93.39% cov
    • Alignment Length
      4,960 bp
    • CIGAR string
      160H421MN162MN212MN137MN443MN80MN206MN41MN194MN17MN1112MN8MN68MN279MNMN122MN251MN11MN50MN64MN192MN536MN62MN268M mismatches: 23 - insertions: 0 - deletions: 0
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:206725494
      NM_001135199
    • Hit length
      5,163 bp
    • E Value
      0E0
    • BLAST Score
      8,480.9 bits
    • Similarity
      96.48%
    • Coverage
      99.82%
    • Alignment (schematic)

      SEQ ID NO 2
      99.82% cov
      NM_001135199
      98.78% cov
    • Alignment Length
      5,115 bp
    • CIGAR string
      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 mismatches: 161 - insertions: 4 - deletions: 15
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296218978
      XM_002755640
    • Hit length
      5,233 bp
    • E Value
      0E0
    • BLAST Score
      7,808.8 bits
    • Similarity
      95.09%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 2
      96.88% cov
      XM_002755640
      94.78% cov
    • Alignment Length
      4,966 bp
    • CIGAR string
      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 mismatches: 232 - insertions: 6 - deletions: 6
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297492243
      XM_002699405
      1 of 4 hits reported for Bos taurus.
    • Hit length
      5,648 bp
    • E Value
      0E0
    • BLAST Score
      6,715.5 bits
    • Similarity
      91.13%
    • Coverage
      96.88%
    • Alignment (schematic)

      SEQ ID NO 2
      96.88% cov
      XM_002699405
      87.78% cov
    • Alignment Length
      4,970 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194218563
      XM_001916973
    • Hit length
      4,872 bp
    • E Value
      0E0
    • BLAST Score
      6,571.5 bits
    • Similarity
      91.62%
    • Coverage
      92.93%
    • Alignment (schematic)

      SEQ ID NO 2
      92.93% cov
      XM_001916973
      97.66% cov
    • Alignment Length
      4,773 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:253314535
      NM_008513
      1 of 5 hits reported for Mus musculus.
    • Hit length
      5,172 bp
    • E Value
      0E0
    • BLAST Score
      5,740.5 bits
    • Similarity
      87.03%
    • Coverage
      99.86%
    • Alignment (schematic)

      SEQ ID NO 2
      99.86% cov
      NM_008513
      98.7% cov
    • Alignment Length
      5,141 bp
Occurrence
37 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,615
Type
peptide
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:3582145
      BAA33051
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      1,615 aa
    • E Value
      0E0
    • BLAST Score
      3,335.8 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BAA33051
      100% cov
    • Alignment Length
      1,615 aa
    • CIGAR string
      153MN151MN22MN368MN917M mismatches: 4 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114638794
      XP_508605
    • Hit length
      1,701 aa
    • E Value
      0E0
    • BLAST Score
      3,214.9 bits
    • Similarity
      99.56%
    • Coverage
      98.58%
    • Alignment (schematic)

      SEQ ID NO 3
      98.58% cov
      XP_508605
      93.53% cov
    • Alignment Length
      1,592 aa
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:206725495
      NP_001128671
    • Hit length
      1,612 aa
    • E Value
      0E0
    • BLAST Score
      3,212.2 bits
    • Similarity
      99.62%
    • Coverage
      98.39%
    • Alignment (schematic)

      SEQ ID NO 3
      98.39% cov
      NP_001128671
      98.57% cov
    • Alignment Length
      1,589 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296218979
      XP_002755686
    • Hit length
      1,675 aa
    • E Value
      0E0
    • BLAST Score
      3,152.8 bits
    • Similarity
      98.49%
    • Coverage
      98.27%
    • Alignment (schematic)

      SEQ ID NO 3
      98.27% cov
      XP_002755686
      94.75% cov
    • Alignment Length
      1,587 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:119923053
      XP_614220
      1 of 2 hits reported for Bos taurus.
    • Hit length
      1,802 aa
    • E Value
      0E0
    • BLAST Score
      3,130.9 bits
    • Similarity
      98.36%
    • Coverage
      98.39%
    • Alignment (schematic)

      SEQ ID NO 3
      98.39% cov
      XP_614220
      88.18% cov
    • Alignment Length
      1,589 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194218564
      XP_001917008
    • Hit length
      1,623 aa
    • E Value
      0E0
    • BLAST Score
      3,115.5 bits
    • Similarity
      97.5%
    • Coverage
      98.58%
    • Alignment (schematic)

      SEQ ID NO 3
      98.58% cov
      XP_001917008
      98.4% cov
    • Alignment Length
      1,599 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281353403
      EFB28987
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,583 aa
    • E Value
      0E0
    • BLAST Score
      3,109.3 bits
    • Similarity
      97.86%
    • Coverage
      98.2%
    • Alignment (schematic)

      SEQ ID NO 3
      98.2% cov
      EFB28987
      100% cov
    • Alignment Length
      1,588 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:253314536
      NP_032539
      1 of 3 hits reported for Mus musculus.
    • Hit length
      1,614 aa
    • E Value
      0E0
    • BLAST Score
      3,070 bits
    • Similarity
      96.98%
    • Coverage
      98.39%
    • Alignment (schematic)

      SEQ ID NO 3
      98.39% cov
      NP_032539
      98.45% cov
    • Alignment Length
      1,589 aa
Occurrence
33 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
1,615
Type
peptide
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:3582145
      BAA33051
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      1,615 aa
    • E Value
      0E0
    • BLAST Score
      3,333.1 bits
    • Similarity
      99.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BAA33051
      100% cov
    • Alignment Length
      1,615 aa
    • CIGAR string
      153MN16MN134MN22MN368MN917M mismatches: 5 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114638794
      XP_508605
    • Hit length
      1,701 aa
    • E Value
      0E0
    • BLAST Score
      3,213.3 bits
    • Similarity
      99.5%
    • Coverage
      98.58%
    • Alignment (schematic)

      SEQ ID NO 4
      98.58% cov
      XP_508605
      93.53% cov
    • Alignment Length
      1,592 aa
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:206725495
      NP_001128671
    • Hit length
      1,612 aa
    • E Value
      0E0
    • BLAST Score
      3,209.1 bits
    • Similarity
      99.56%
    • Coverage
      98.39%
    • Alignment (schematic)

      SEQ ID NO 4
      98.39% cov
      NP_001128671
      98.57% cov
    • Alignment Length
      1,589 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296218979
      XP_002755686
    • Hit length
      1,675 aa
    • E Value
      0E0
    • BLAST Score
      3,148.6 bits
    • Similarity
      98.42%
    • Coverage
      98.27%
    • Alignment (schematic)

      SEQ ID NO 4
      98.27% cov
      XP_002755686
      94.75% cov
    • Alignment Length
      1,587 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:119923053
      XP_614220
      1 of 2 hits reported for Bos taurus.
    • Hit length
      1,802 aa
    • E Value
      0E0
    • BLAST Score
      3,128.2 bits
    • Similarity
      98.3%
    • Coverage
      98.39%
    • Alignment (schematic)

      SEQ ID NO 4
      98.39% cov
      XP_614220
      88.18% cov
    • Alignment Length
      1,589 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194218564
      XP_001917008
    • Hit length
      1,623 aa
    • E Value
      0E0
    • BLAST Score
      3,113.6 bits
    • Similarity
      97.44%
    • Coverage
      98.58%
    • Alignment (schematic)

      SEQ ID NO 4
      98.58% cov
      XP_001917008
      98.4% cov
    • Alignment Length
      1,599 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281353403
      EFB28987
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,583 aa
    • E Value
      0E0
    • BLAST Score
      3,107.4 bits
    • Similarity
      97.8%
    • Coverage
      98.2%
    • Alignment (schematic)

      SEQ ID NO 4
      98.2% cov
      EFB28987
      100% cov
    • Alignment Length
      1,588 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:253314536
      NP_032539
      1 of 3 hits reported for Mus musculus.
    • Hit length
      1,614 aa
    • E Value
      0E0
    • BLAST Score
      3,065.8 bits
    • Similarity
      96.92%
    • Coverage
      98.39%
    • Alignment (schematic)

      SEQ ID NO 4
      98.39% cov
      NP_032539
      98.45% cov
    • Alignment Length
      1,589 aa
Occurrence
35 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
3,096
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Occurrence
38 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
26,928
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:14028616
      AF283320
      1 of 19 hits reported for Homo sapiens.
    • Hit length
      122,056 bp
    • E Value
      0E0
    • BLAST Score
      42,824.9 bits
    • Similarity
      99.59%
    • Coverage
      87.21%
    • Alignment (schematic)

      SEQ ID NO 6
      87.21% cov
      AF283320
      19.23% cov
    • Alignment Length
      23,492 bp
    • CIGAR string
      5H745MN15MN7MN16MN11MN6MN4MN24MN47MN86MN27MN14MN10MN37MN3MN86MN1661MN504M3I176MN1317MN3981MD592MN10MN495MN21MD156MN93MN86MI28MN23MN25MN306MN3MN49MN70MN1271MN131MN2MNMD6MN3MN10MD7MN36MD62MN26MN119MN21MN5MN2MN146MN141MN12MNMI3MN2M3N919MN701MD10MD3MN16MN38MN10M2N137MN62MN67M2D3M6D233MI49MN982MN149MN227MN15MN969MI277MN36MN2055MN176MN14MD7MN206MD320MN9MN3MN826MN2017MD118M3438H mismatches: 72 - insertions: 7 - deletions: 18
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:165727231
      AC212251
    • Hit length
      215,503 bp
    • E Value
      0E0
    • BLAST Score
      3,011.2 bits
    • Similarity
      88.68%
    • Coverage
      9.22%
    • Alignment (schematic)

      SEQ ID NO 6
      9.22% cov
      AC212251
      1.16% cov
    • Alignment Length
      2,527 bp
    • CIGAR string
      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 mismatches: 208 - insertions: 44 - deletions: 34
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:125490659
      AC187742
    • Hit length
      182,736 bp
    • E Value
      0E0
    • BLAST Score
      745.3 bits
    • Similarity
      89.5%
    • Coverage
      2.21%
    • Alignment (schematic)

      SEQ ID NO 6
      2.21% cov
      AC187742
      0.32% cov
    • Alignment Length
      600 bp
    • CIGAR string
      2749H5MN5MN3MN27MN3MN10MN10MNMN8MD2MI6M2NMN3MD6MN14MD10M2N8MNMN11MN31MN5MN6MN27MDMNMI6M3N19MDMIN5MDN5MD8MD6MI6MNM2NMN9MN27MN4MN3MN40MN8MN2MN8MN19MN8MN6MN18MN31MN29MN16M4D12MN2M2N32M23583H mismatches: 47 - insertions: 4 - deletions: 12
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:33342323
      AC129881
    • Hit length
      177,987 bp
    • E Value
      0E0
    • BLAST Score
      712.1 bits
    • Similarity
      81%
    • Coverage
      3.54%
    • Alignment (schematic)

      SEQ ID NO 6
      3.54% cov
      AC129881
      0.52% cov
    • Alignment Length
      979 bp
    • CIGAR string
      19832H5MN14MN14MN16M2N4MDM6D8MN11MN27MNMN7MN3MIMN10MN3MD2MN4MN11MN18MN12MN6MN3MN30MN6M2DMN5MN11MN4MN20MD12M2D6M2D4MD2N2MN2MDNMDMDMDMDNM2N10MIN4MD2MI2MN2M2I2MI2MNMI5MI8MNM3N4MN3M3N8MNMDN3M2N3MNM2N2MN6MN2MN12MN4MDMI9MINMD4MIMI5M2D5M2NMIMNMD9M2D4NMN3MN4MD3NMD5MN2MN2MIMI3M3I3MN3MN10MN5M3N5MD3MI4MN4M2N10MN9M2N10MNMD2M3DMDNMDMN3MNMI2MINMNM4NMN4MI3MDNMDN2MDNMIMI2NMD3N7MD9MD22MN20MNMN6MN23MN4MN37MN8MN5MN3MN5MN4MN7MNM2I69MNMN14MN16M6143H mismatches: 115 - insertions: 26 - deletions: 45
Occurrence
38 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
29,430
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21728152
      AP002366
      1 of 20 hits reported for Homo sapiens.
    • Hit length
      198,720 bp
    • E Value
      0E0
    • BLAST Score
      53,993.5 bits
    • Similarity
      99.82%
    • Coverage
      99.87%
    • Alignment (schematic)

      SEQ ID NO 7
      99.87% cov
      AP002366
      14.79% cov
    • Alignment Length
      29,393 bp
    • CIGAR string
      2H432MN640MN1776MN118MN61MN1301MN8MN3MN8MN8MN24MN8MNMN2MN3MN33MN2MN14MN2MN3MN20MN3MN10MN2MN3MN45MI2576MD1204MN409MN7MN1030MN8MN44MN37MN576MN518MN27MN2MN1634MN2616MN2752MN43MN1250MN3841MI772MN328MN476MN1676MN881MN1397MD93MN142MN38MN433M37H mismatches: 49 - insertions: 2 - deletions: 2
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:165727231
      AC212251
    • Hit length
      215,503 bp
    • E Value
      0E0
    • BLAST Score
      5,712.8 bits
    • Similarity
      89.11%
    • Coverage
      15.89%
    • Alignment (schematic)

      SEQ ID NO 7
      15.89% cov
      AC212251
      2.14% cov
    • Alignment Length
      4,738 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:161621395
      AC197801
    • Hit length
      187,173 bp
    • E Value
      0E0
    • BLAST Score
      1,646.5 bits
    • Similarity
      89.92%
    • Coverage
      4.33%
    • Alignment (schematic)

      SEQ ID NO 7
      4.33% cov
      AC197801
      0.7% cov
    • Alignment Length
      1,309 bp
    • CIGAR string
      6947H17MN8MD4M2N29MNMN12MINMD10MN53M2N8MN23MN5MI22MIMN6M2N3MN2MN6MNMN6MN7MN11MN9M2N13MN3MN8M2N19MN7MN4MN4MN28MN50MN12M2DM2D9MN14MN3MN7MN59MN3M2I8MD5MN27MN11M3N7MN8MN32MN17MN15MN4MN3MN14MN15M2N45MN10MN19MN5MN46MN32MN14M2NI43MN20MN2MN5MN3MN12MN12MN6MIMD9M2N13MIMNMIM2I2MIMIM2I2MIMI3MIMIM2IMIM5IMI2M2IMI2MIM3I5MN15MN10MN2MN19MN2MN6M4N24MN6MN16MN11MI4M2N8MN20MN53M21210H mismatches: 88 - insertions: 36 - deletions: 8
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:121584210
      AC192258
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      189,780 bp
    • E Value
      0E0
    • BLAST Score
      691.8 bits
    • Similarity
      83.1%
    • Coverage
      2.62%
    • Alignment (schematic)

      SEQ ID NO 7
      2.62% cov
      AC192258
      0.41% cov
    • Alignment Length
      793 bp
    • CIGAR string
      2590H25MN12M2N20MN5MNMN7M2N5MN26MN6MIMN8M2N3MN6MN11MNMN10MN13MN6MD2NMI7MN3MN6MN11MN8MN21MN5MNMNMN7MN2MI2N8MN8MIMD4M3N4M4D4M2NMN6MN8M2I5MIMD3M2N8MN3MD2MI10MN6MN6MN2MN2MN9M2N9MN4MN5MN7MD2MI7M2N2MIMI2N6MN5MN9M5I2MIMNMN5MN2MN11MN3MN10MN2M2N3M2N2M2N5MN8MN11MN7M2N5MN21M2N4MDMN9MD2MI2N21MN31MN13MN2MN16MD3MI4MN3MNM2NMN11M2N3MI3MN2MNMN2M2N25MNMI4M26068H mismatches: 101 - insertions: 21 - deletions: 12
Occurrence
38 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
33,769
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21728152
      AP002366
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      198,720 bp
    • E Value
      0E0
    • BLAST Score
      50,446.1 bits
    • Similarity
      99.84%
    • Coverage
      81.28%
    • Alignment (schematic)

      SEQ ID NO 8
      81.28% cov
      AP002366
      13.81% cov
    • Alignment Length
      27,451 bp
    • CIGAR string
      6285H5MN4MN37MN5026MD17MD10MD1005MN126MN716MN511MN40MN551MN470MN7MN6MN6MN12MN47MN1009MI610MIMD211MN702MN40MN1425MNMN6MN6120MN514MD80MN2817MN1335MN231MN3MN344MN1402MN260MD15MN1374MN5MN290MN2MN12MD3M35H mismatches: 34 - insertions: 2 - deletions: 7
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:147907467
      AC200583
      1 of 9 hits reported for Macaca mulatta.
    • Hit length
      162,995 bp
    • E Value
      0E0
    • BLAST Score
      1,127.6 bits
    • Similarity
      88.3%
    • Coverage
      2.79%
    • Alignment (schematic)

      SEQ ID NO 8
      2.79% cov
      AC200583
      0.58% cov
    • Alignment Length
      957 bp
    • CIGAR string
      17132H9MN5MN12MN6MN9MN17MDMD3M2I21MN9MN5MN21MNMN3MN10MN2MNMN2MN11MN4MDMN9MI13MN10MN6MN21MN2MN2MN9MNMN2MN13MN14MN9MN4MNMN3MNMN4MNMD2MN2MD3MI5MD4MN4MN19MN37MN24MN6MN17MN32MN3M2N4MDNMI9MN12MI11MN9MN15MN4MN29MN27MN15MN3M2I6MI2MI6MN2MN2MN2MN6M2N6MNMN28M3N28M2N44MN6MN3MN2MN2MNMN2MN5MNMN4MI8M2I9MIMD8MN20MN13MNMN3MN5MN2MN12MN12MN2MNMN5M2N6MN3M15694H mismatches: 90 - insertions: 14 - deletions: 8
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:124249148
      AC192984
    • Hit length
      154,313 bp
    • E Value
      0E0
    • BLAST Score
      1,094.3 bits
    • Similarity
      86.5%
    • Coverage
      2.98%
    • Alignment (schematic)

      SEQ ID NO 8
      2.98% cov
      AC192984
      0.66% cov
    • Alignment Length
      1,030 bp
    • CIGAR string
      17056H4MN2MN5MN2MN3MNMI3MD7M2N5M2N2MDMI5M2NMN2MN2MN7MDMN3MIMD3MI4MI2MN5MN15MN12MN23MN21MN3MN3MN30MIMDMNMN10MN2MN4MN4MN2MN3MN6MN9M3I13MN2MN14MN7MN7MN3MNMN2MN2MN9MN4MN8MN4MN24MN6MN2M2DMN4MNM3DN2M2DMN2MD2MN4MD2N2MD34MIMD9MN10MNMN2MN20MI3MD34MN2MN16M2N3MN4MN12MI9M2I13M2N9MN15MN4MI2MD18MN4MN3MN32MN3MNMN2MNMN3M2I4M3I3MI4MN18MN7MN8MN20MNMN26MN34MN2MN17MN3MN6M2N2MN7MN4MI8M2I10MN31MN13MN4MN33MN4MN4M15707H mismatches: 97 - insertions: 24 - deletions: 18
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:116312199
      CT954310
    • Hit length
      191,812 bp
    • E Value
      0E0
    • BLAST Score
      954 bits
    • Similarity
      85.55%
    • Coverage
      2.72%
    • Alignment (schematic)

      SEQ ID NO 8
      2.72% cov
      CT954310
      0.48% cov
    • Alignment Length
      941 bp
    • CIGAR string
      17143H4MDMN4MN4M2N6MN8M2N5MN9MN3MNM2N3MIMNMD10MN10MN2MN4MDMIMN8MN11MN4MN7MN2MN2MNMN2M2N8MI2MDN5MD22M2N6M2N2MN4M2N5MN6MN2MN5MN2MN3M2I14MN13MN13MN2MN6M2NMN4MN3MI2MD4MDMD5M2N5MI3MD4MD4MI2MI3MI14MN6MN7M2N22M2N5MN16MN6MIN50MN4MN3MIMDMNMN31MN9M2N14MN4MN25MN3MN27MN15MN2MN5MI6MI3MI3MI3MI3MI3M2I3M3N6MN4MN2MN4MN18MN6MN15MN6M2N7MN7MN2MN12MN19MN2M2N6M2N2MN6MI24MN22MN11MN7MN2MN4MN2MDMN28MN4MN5M15706H mismatches: 103 - insertions: 21 - deletions: 12
Occurrence
38 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
72,049
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21728152
      AP002366
      1 of 15 hits reported for Homo sapiens.
    • Hit length
      198,720 bp
    • E Value
      0E0
    • BLAST Score
      91,812.9 bits
    • Similarity
      99.74%
    • Coverage
      69.54%
    • Alignment (schematic)

      SEQ ID NO 9
      69.54% cov
      AP002366
      25.22% cov
    • Alignment Length
      50,137 bp
    • CIGAR string
      38H4MI1044MN2283MN3543MD1440MNMIMN18MN6MN121M2I3627MN562MD317MN1182MN267MN2264MI190MN496MN57MN1036MN162MD401MIM2I4947MN3809M2N67MD113MN834MN2MNMNMNMNM2NMN12MN2MN2MN8MN689MN315MN606MIMI27M16I4M2I4M2I585MN1178MN332MN891MN2467MN72MD209MN910MD174MN16MN1196MN30MN122MD550MN1045MN1444MN1076MDMD57MDMD9M3D8M8D546MI117MN2015MN282MN101MN74MN96MN1393MI161MI948MN83MN327MD4MD4MD964MI4M2I7M4N5M5N3MNM2N7MI4MD8MN7MD3M21911H mismatches: 66 - insertions: 37 - deletions: 27
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114638793
      XM_508605
    • Hit length
      5,311 bp
    • E Value
      0E0
    • BLAST Score
      858 bits
    • Similarity
      99.57%
    • Coverage
      0.65%
    • Alignment (schematic)

      SEQ ID NO 9
      0.65% cov
      XM_508605
      8.85% cov
    • Alignment Length
      470 bp
    • CIGAR string
      70434H135MN62MN271M1145H mismatches: 2 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249868
      XM_003274029
    • Hit length
      5,335 bp
    • E Value
      0E0
    • BLAST Score
      835.8 bits
    • Similarity
      98.52%
    • Coverage
      0.66%
    • Alignment (schematic)

      SEQ ID NO 9
      0.66% cov
      XM_003274029
      8.87% cov
    • Alignment Length
      474 bp
    • CIGAR string
      70431H54MN83MN2MN83MN58MIMN43MD143M1145H mismatches: 5 - insertions: 1 - deletions: 1
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297687979
      XM_002821429
    • Hit length
      4,561 bp
    • E Value
      0E0
    • BLAST Score
      819.2 bits
    • Similarity
      98.09%
    • Coverage
      0.65%
    • Alignment (schematic)

      SEQ ID NO 9
      0.65% cov
      XM_002821429
      10.3% cov
    • Alignment Length
      470 bp
    • CIGAR string
      70434H99MN35MN2MN35MN35MN57MN3MN9MN130MN56M1145H mismatches: 9 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109109565
      XM_001115564
    • Hit length
      1,806 bp
    • E Value
      0E0
    • BLAST Score
      780.4 bits
    • Similarity
      96.81%
    • Coverage
      0.65%
    • Alignment (schematic)

      SEQ ID NO 9
      0.65% cov
      XM_001115564
      25.8% cov
    • Alignment Length
      470 bp
    • CIGAR string
      70434H30MI3MD5MN26MN68MN2MN35MN47MN45MN13MN97MDMD3MD7MN66MN7M1146H mismatches: 10 - insertions: 1 - deletions: 4
Occurrence
38 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
8,705
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21327917
      AP000807
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      204,439 bp
    • E Value
      0E0
    • BLAST Score
      14,960.8 bits
    • Similarity
      99.66%
    • Coverage
      94.05%
    • Alignment (schematic)

      SEQ ID NO 10
      94.05% cov
      AP000807
      4% cov
    • Alignment Length
      8,188 bp
    • CIGAR string
      387H4MN24MN78MN20MN1951MN6027MNMN2MN3MN4MN3MND2MI2M2NMD4MNMN2MNMD2MN2MN3MN6MN4MD2MN2MN4MN5M131H mismatches: 23 - insertions: 1 - deletions: 4
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114638793
      XM_508605
    • Hit length
      5,311 bp
    • E Value
      0E0
    • BLAST Score
      858 bits
    • Similarity
      99.57%
    • Coverage
      5.4%
    • Alignment (schematic)

      SEQ ID NO 10
      5.4% cov
      XM_508605
      8.85% cov
    • Alignment Length
      470 bp
    • CIGAR string
      4635H135MN62MN271M3600H mismatches: 2 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332249868
      XM_003274029
    • Hit length
      5,335 bp
    • E Value
      0E0
    • BLAST Score
      835.8 bits
    • Similarity
      98.52%
    • Coverage
      5.43%
    • Alignment (schematic)

      SEQ ID NO 10
      5.43% cov
      XM_003274029
      8.87% cov
    • Alignment Length
      474 bp
    • CIGAR string
      4632H54MN83MN2MN83MN58MIMN43MD143M3600H mismatches: 5 - insertions: 1 - deletions: 1
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297687979
      XM_002821429
    • Hit length
      4,561 bp
    • E Value
      0E0
    • BLAST Score
      819.2 bits
    • Similarity
      98.09%
    • Coverage
      5.4%
    • Alignment (schematic)

      SEQ ID NO 10
      5.4% cov
      XM_002821429
      10.3% cov
    • Alignment Length
      470 bp
    • CIGAR string
      4635H99MN35MN2MN35MN35MN57MN3MN9MN130MN56M3600H mismatches: 9 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109109565
      XM_001115564
    • Hit length
      1,806 bp
    • E Value
      0E0
    • BLAST Score
      780.4 bits
    • Similarity
      96.81%
    • Coverage
      5.39%
    • Alignment (schematic)

      SEQ ID NO 10
      5.39% cov
      XM_001115564
      25.8% cov
    • Alignment Length
      470 bp
    • CIGAR string
      4635H30MI3MD5MN26MN68MN2MN35MN47MN45MN13MN97MDMD3MD7MN66MN7M3601H mismatches: 10 - insertions: 1 - deletions: 4
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296218978
      XM_002755640
    • Hit length
      5,233 bp
    • E Value
      0E0
    • BLAST Score
      769.3 bits
    • Similarity
      96.18%
    • Coverage
      5.4%
    • Alignment (schematic)

      SEQ ID NO 10
      5.4% cov
      XM_002755640
      8.98% cov
    • Alignment Length
      471 bp
    • CIGAR string
      4635H6MN20MN11MN35MN44MN14MN2MN35MN29MN17MN17MN17MN23M2N42MD18MI49MN64MN10M3600H mismatches: 16 - insertions: 1 - deletions: 1
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:206725494
      NM_001135199
    • Hit length
      5,163 bp
    • E Value
      0E0
    • BLAST Score
      761.9 bits
    • Similarity
      96.15%
    • Coverage
      5.34%
    • Alignment (schematic)

      SEQ ID NO 10
      5.34% cov
      NM_001135199
      8.97% cov
    • Alignment Length
      467 bp
    • CIGAR string
      4635H30MI3MD5MN26MN68MN2MN27MN7MN47MN23MN11MN9MN13MN97MDMD3MD7MN66MI4M3605H mismatches: 12 - insertions: 2 - deletions: 4
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335281382
      XM_003122446
    • Hit length
      4,769 bp
    • E Value
      0E0
    • BLAST Score
      682.5 bits
    • Similarity
      93.15%
    • Coverage
      5.34%
    • Alignment (schematic)

      SEQ ID NO 10
      5.34% cov
      XM_003122446
      9.75% cov
    • Alignment Length
      467 bp
    • CIGAR string
      4635H15MN2MN2MN26MN2MN8MN74MN8MN8MN38MN5MN5MN8MN8MN14MN20MN21MNMN3MN11MN33MN29MN31MN8MD5MN4MN4MI2MD12MN5MI11MN7MN5M3605H mismatches: 28 - insertions: 2 - deletions: 2
Occurrence
38 times in PatSeqDB
Tools
PatSeq Finder

Filter Sequences

Clear

Sign in to the Lens

Forgot Password? Register New Account

Language Improvements

We have been busy updating our localisation and all existing languages.

Much of these translations have been done using machine translation with a check from a native speaker, however not all elements of the UI have been checked for each language. If you see a term that is not translated correctly or should be improved, please contact Support.

  Don't show again
Feedback