US 2005/0042229 A1 - Influenza Hemagglutinin And Neuraminidase Variants - The Lens

Data obtained from: USPTO Fulltext

68 sequences found in this patent (in total)

Download sequences in fasta format: 34 peptides 34 nucleotides

Displaying 1 - 10 of 68 sequences

SEQ ID NO

Length

Sequence Type

Locations

Declared organism

Determined organism

Occurrence

Tools

SEQ ID NO

Length

1,745

Sequence Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism

Influenza A virus

Determined organism

Influenza A virus (A/Shangdong/9/1993(H3N2))
Influenza A virus (A/Shangdong/9/1993(H3N2))
Public DB hit
GI:218875078
CY036903

Hit length
1,715 bp

E Value
0E0

BLAST Score
3,157 bits

Similarity

99.88%

Coverage

98.28%

Alignment (schematic)

SEQ ID NO 1

98.28% cov
CY036903

100% cov

Alignment Length
1,715 bp

CIGAR string
20H784MN442MN487M10H mismatches: 2 - insertions: 0 - deletions: 0
Influenza A virus (A/X-117(Puerto Rico/8/1934-Beijing/32/1992)(H3N2))
Influenza A virus (A/X-117(Puerto Rico/8/1934-Beijing/32/1992)(H3N2))
Public DB hit
GI:218664133
CY036807

Hit length
1,723 bp

E Value
0E0

BLAST Score
3,138.6 bits

Similarity

99.54%

Coverage

98.74%

Alignment (schematic)

SEQ ID NO 1

98.74% cov
CY036807

100% cov

Alignment Length
1,723 bp

CIGAR string
12H180MN33MN147MN116MN46MN96MN259MN69MN769M10H mismatches: 8 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/760/1993(H3N2))
Influenza A virus (A/New York/760/1993(H3N2))
Public DB hit
GI:109915300
CY012144

Hit length
1,723 bp

E Value
0E0

BLAST Score
3,133 bits

Similarity

99.48%

Coverage

98.74%

Alignment (schematic)

SEQ ID NO 1

98.74% cov
CY012144

100% cov

Alignment Length
1,723 bp

CIGAR string
11H132MN48MN33MN24MN239MN253MN219MN278MN224MN264M11H mismatches: 9 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/768/1993(H3N2))
Influenza A virus (A/New York/768/1993(H3N2))
Public DB hit
GI:112788974
CY013621

Hit length
1,725 bp

E Value
0E0

BLAST Score
3,125.7 bits

Similarity

99.36%

Coverage

98.85%

Alignment (schematic)

SEQ ID NO 1

98.85% cov
CY013621

100% cov

Alignment Length
1,725 bp
Influenza A virus (A/Beijing/32/1992(H3N2))
Influenza A virus (A/Beijing/32/1992(H3N2))
Public DB hit
GI:194304840
CY033606

Hit length
1,715 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.53%

Coverage

98.28%

Alignment (schematic)

SEQ ID NO 1

98.28% cov
CY033606

100% cov

Alignment Length
1,715 bp
Influenza A virus (A/New York/803/1993(H3N2))
Influenza A virus (A/New York/803/1993(H3N2))
Public DB hit
GI:112789373
CY013789

Hit length
1,724 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.36%

Coverage

98.8%

Alignment (schematic)

SEQ ID NO 1

98.8% cov
CY013789

100% cov

Alignment Length
1,724 bp
Influenza A virus (A/New York/788/1993(H3N2))
Influenza A virus (A/New York/788/1993(H3N2))
Public DB hit
GI:112789145
CY013693

Hit length
1,724 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.36%

Coverage

98.8%

Alignment (schematic)

SEQ ID NO 1

98.8% cov
CY013693

100% cov

Alignment Length
1,724 bp
Influenza A virus (A/New York/781/1993(H3N2))
Influenza A virus (A/New York/781/1993(H3N2))
Public DB hit
GI:110734227
CY013184

Hit length
1,724 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.36%

Coverage

98.8%

Alignment (schematic)

SEQ ID NO 1

98.8% cov
CY013184

100% cov

Alignment Length
1,724 bp
Influenza A virus (A/New York/754/1993(H3N2))
Influenza A virus (A/New York/754/1993(H3N2))
Public DB hit
GI:110734189
CY013168

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.42%

Coverage

98.62%

Alignment (schematic)

SEQ ID NO 1

98.62% cov
CY013168

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/762/1993(H3N2))
Influenza A virus (A/New York/762/1993(H3N2))
Public DB hit
GI:109915338
CY012160

Hit length
1,727 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.31%

Coverage

98.97%

Alignment (schematic)

SEQ ID NO 1

98.97% cov
CY012160

100% cov

Alignment Length
1,727 bp
Influenza A virus (A/New York/798/1993(H3N2))
Influenza A virus (A/New York/798/1993(H3N2))
Public DB hit
GI:112789297
CY013757

Hit length
1,723 bp

E Value
0E0

BLAST Score
3,122 bits

Similarity

99.36%

Coverage

98.74%

Alignment (schematic)

SEQ ID NO 1

98.74% cov
CY013757

100% cov

Alignment Length
1,723 bp
Influenza A virus (A/New York/769/1993(H3N2))
Influenza A virus (A/New York/769/1993(H3N2))
Public DB hit
GI:112788993
CY013629

Hit length
1,723 bp

E Value
0E0

BLAST Score
3,122 bits

Similarity

99.36%

Coverage

98.74%

Alignment (schematic)

SEQ ID NO 1

98.74% cov
CY013629

100% cov

Alignment Length
1,723 bp
Influenza A virus (A/New York/776/1993(H3N2))
Influenza A virus (A/New York/776/1993(H3N2))
Public DB hit
GI:112789069
CY013661

Hit length
1,723 bp

E Value
0E0

BLAST Score
3,122 bits

Similarity

99.36%

Coverage

98.74%

Alignment (schematic)

SEQ ID NO 1

98.74% cov
CY013661

100% cov

Alignment Length
1,723 bp
Influenza A virus (A/New York/759/1993(H3N2))
Influenza A virus (A/New York/759/1993(H3N2))
Public DB hit
GI:109915281
CY012136

Hit length
1,723 bp

E Value
0E0

BLAST Score
3,122 bits

Similarity

99.36%

Coverage

98.74%

Alignment (schematic)

SEQ ID NO 1

98.74% cov
CY012136

100% cov

Alignment Length
1,723 bp
Influenza A virus (A/New York/801/1993(H3N2))
Influenza A virus (A/New York/801/1993(H3N2))
Public DB hit
GI:112789335
CY013773

Hit length
1,722 bp

E Value
0E0

BLAST Score
3,120.1 bits

Similarity

99.36%

Coverage

98.68%

Alignment (schematic)

SEQ ID NO 1

98.68% cov
CY013773

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/New York/761/1993(H3N2))
Influenza A virus (A/New York/761/1993(H3N2))
Public DB hit
GI:109915319
CY012152

Hit length
1,724 bp

E Value
0E0

BLAST Score
3,120.1 bits

Similarity

99.3%

Coverage

98.8%

Alignment (schematic)

SEQ ID NO 1

98.8% cov
CY012152

100% cov

Alignment Length
1,724 bp
Influenza A virus (A/New York/797/1993(H3N2))
Influenza A virus (A/New York/797/1993(H3N2))
Public DB hit
GI:112789278
CY013749

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.36%

Coverage

98.62%

Alignment (schematic)

SEQ ID NO 1

98.62% cov
CY013749

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/802/1993(H3N2))
Influenza A virus (A/New York/802/1993(H3N2))
Public DB hit
GI:112789354
CY013781

Hit length
1,724 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.3%

Coverage

98.8%

Alignment (schematic)

SEQ ID NO 1

98.8% cov
CY013781

100% cov

Alignment Length
1,724 bp
Influenza A virus (A/New York/766/1993(H3N2))
Influenza A virus (A/New York/766/1993(H3N2))
Public DB hit
GI:112788955
CY013613

Hit length
1,724 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.3%

Coverage

98.8%

Alignment (schematic)

SEQ ID NO 1

98.8% cov
CY013613

100% cov

Alignment Length
1,724 bp
Influenza A virus (A/New York/755/1993(H3N2))
Influenza A virus (A/New York/755/1993(H3N2))
Public DB hit
GI:110734208
CY013176

Hit length
1,724 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.3%

Coverage

98.8%

Alignment (schematic)

SEQ ID NO 1

98.8% cov
CY013176

100% cov

Alignment Length
1,724 bp
Influenza A virus (A/New York/777/1993(H3N2))
Influenza A virus (A/New York/777/1993(H3N2))
Public DB hit
GI:110629766
CY012760

Hit length
1,724 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.3%

Coverage

98.8%

Alignment (schematic)

SEQ ID NO 1

98.8% cov
CY012760

100% cov

Alignment Length
1,724 bp
Influenza A virus (A/New York/775/1993(H3N2))
Influenza A virus (A/New York/775/1993(H3N2))
Public DB hit
GI:110629747
CY012752

Hit length
1,724 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.3%

Coverage

98.8%

Alignment (schematic)

SEQ ID NO 1

98.8% cov
CY012752

100% cov

Alignment Length
1,724 bp
Influenza A virus (A/New York/770/1993(H3N2))
Influenza A virus (A/New York/770/1993(H3N2))
Public DB hit
GI:110629709
CY012736

Hit length
1,724 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.3%

Coverage

98.8%

Alignment (schematic)

SEQ ID NO 1

98.8% cov
CY012736

100% cov

Alignment Length
1,724 bp
Influenza A virus (A/New York/764/1993(H3N2))
Influenza A virus (A/New York/764/1993(H3N2))
Public DB hit
GI:109915376
CY012176

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.36%

Coverage

98.62%

Alignment (schematic)

SEQ ID NO 1

98.62% cov
CY012176

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/800/1993(H3N2))
Influenza A virus (A/New York/800/1993(H3N2))
Public DB hit
GI:115521540
CY016483

Hit length
1,723 bp

E Value
0E0

BLAST Score
3,116.4 bits

Similarity

99.3%

Coverage

98.74%

Alignment (schematic)

SEQ ID NO 1

98.74% cov
CY016483

100% cov

Alignment Length
1,723 bp

Occurrence

31 times in PatSeqDB

in 2 families
(1 referenced in claims)
in 31 documents

Tools

SEQ ID NO

Length

1,429

Sequence Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism

Influenza A virus

Determined organism

Influenza A virus (A/Shangdong/9/1993(H3N2))
Influenza A virus (A/Shangdong/9/1993(H3N2))
Public DB hit
GI:218875084
CY036905

Hit length
1,431 bp

E Value
0E0

BLAST Score
2,612.3 bits

Similarity

99.93%

Coverage

99.23%

Alignment (schematic)

SEQ ID NO 2

99.23% cov
CY036905

99.02% cov

Alignment Length
1,418 bp

CIGAR string
1362MD55M11H mismatches: 0 - insertions: 0 - deletions: 1
Influenza A virus (A/Hong Kong/14/1992(H3N2))
Influenza A virus (A/Hong Kong/14/1992(H3N2))
Public DB hit
GI:77863324
CY003714

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,604.9 bits

Similarity

99.58%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
CY003714

97.41% cov

Alignment Length
1,429 bp

CIGAR string
93MN218MN71MN32MN944MD56MD9M mismatches: 4 - insertions: 0 - deletions: 2
Influenza A virus (A/Johannesburg/33/1994(H3N2))
Influenza A virus (A/Johannesburg/33/1994(H3N2))
Public DB hit
GI:22859372
AJ457946

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,593.8 bits

Similarity

99.44%

Coverage

100%

Alignment (schematic)

SEQ ID NO 2

100% cov
AJ457946

97.41% cov

Alignment Length
1,429 bp

CIGAR string
93MN129MN88MN104MN579MN23MN340MD56MD9M mismatches: 6 - insertions: 0 - deletions: 2
Influenza A virus (A/New York/773/1993(H3N2))
Influenza A virus (A/New York/773/1993(H3N2))
Public DB hit
GI:112789036
CY013647

Hit length
1,436 bp

E Value
0E0

BLAST Score
2,592 bits

Similarity

99.65%

Coverage

99.3%

Alignment (schematic)

SEQ ID NO 2

99.3% cov
CY013647

98.75% cov

Alignment Length
1,419 bp
Influenza A virus (A/New York/796/1993(H3N2))
Influenza A virus (A/New York/796/1993(H3N2))
Public DB hit
GI:113171542
CY014153

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,590.1 bits

Similarity

99.72%

Coverage

99.02%

Alignment (schematic)

SEQ ID NO 2

99.02% cov
CY014153

98.74% cov

Alignment Length
1,415 bp
Influenza A virus (A/New York/776/1993(H3N2))
Influenza A virus (A/New York/776/1993(H3N2))
Public DB hit
GI:112789074
CY013663

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,590.1 bits

Similarity

99.72%

Coverage

99.02%

Alignment (schematic)

SEQ ID NO 2

99.02% cov
CY013663

98.74% cov

Alignment Length
1,415 bp
Influenza A virus (A/New York/780/1993(H3N2))
Influenza A virus (A/New York/780/1993(H3N2))
Public DB hit
GI:112789093
CY013671

Hit length
1,431 bp

E Value
0E0

BLAST Score
2,588.3 bits

Similarity

99.72%

Coverage

98.95%

Alignment (schematic)

SEQ ID NO 2

98.95% cov
CY013671

98.74% cov

Alignment Length
1,414 bp
Influenza A virus (A/New York/765/1993(H3N2))
Influenza A virus (A/New York/765/1993(H3N2))
Public DB hit
GI:109915400
CY012186

Hit length
1,431 bp

E Value
0E0

BLAST Score
2,588.3 bits

Similarity

99.72%

Coverage

98.95%

Alignment (schematic)

SEQ ID NO 2

98.95% cov
CY012186

98.74% cov

Alignment Length
1,414 bp
Influenza A virus (A/Nanchang/0074/1994(H3N2))
Influenza A virus (A/Nanchang/0074/1994(H3N2))
Public DB hit
GI:89780379
CY003754

Hit length
1,436 bp

E Value
0E0

BLAST Score
2,586.4 bits

Similarity

99.65%

Coverage

99.09%

Alignment (schematic)

SEQ ID NO 2

99.09% cov
CY003754

98.54% cov

Alignment Length
1,416 bp
Influenza A virus (A/New York/793/1993(H3N2))
Influenza A virus (A/New York/793/1993(H3N2))
Public DB hit
GI:113171523
CY014145

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

99.65%

Coverage

99.02%

Alignment (schematic)

SEQ ID NO 2

99.02% cov
CY014145

98.74% cov

Alignment Length
1,415 bp
Influenza A virus (A/New York/795/1993(H3N2))
Influenza A virus (A/New York/795/1993(H3N2))
Public DB hit
GI:112789264
CY013743

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

99.65%

Coverage

99.02%

Alignment (schematic)

SEQ ID NO 2

99.02% cov
CY013743

98.74% cov

Alignment Length
1,415 bp
Influenza A virus (A/New York/792/1993(H3N2))
Influenza A virus (A/New York/792/1993(H3N2))
Public DB hit
GI:112789226
CY013727

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

99.65%

Coverage

99.02%

Alignment (schematic)

SEQ ID NO 2

99.02% cov
CY013727

98.74% cov

Alignment Length
1,415 bp
Influenza A virus (A/New York/774/1993(H3N2))
Influenza A virus (A/New York/774/1993(H3N2))
Public DB hit
GI:112789055
CY013655

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

99.65%

Coverage

99.02%

Alignment (schematic)

SEQ ID NO 2

99.02% cov
CY013655

98.74% cov

Alignment Length
1,415 bp
Influenza A virus (A/New York/772/1993(H3N2))
Influenza A virus (A/New York/772/1993(H3N2))
Public DB hit
GI:112789017
CY013639

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

99.65%

Coverage

99.02%

Alignment (schematic)

SEQ ID NO 2

99.02% cov
CY013639

98.74% cov

Alignment Length
1,415 bp
Influenza A virus (A/New York/785/1993(H3N2))
Influenza A virus (A/New York/785/1993(H3N2))
Public DB hit
GI:110734289
CY013210

Hit length
1,429 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

99.72%

Coverage

98.81%

Alignment (schematic)

SEQ ID NO 2

98.81% cov
CY013210

98.74% cov

Alignment Length
1,412 bp
Influenza A virus (A/New York/786/1993(H3N2))
Influenza A virus (A/New York/786/1993(H3N2))
Public DB hit
GI:110629828
CY012786

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

99.65%

Coverage

99.02%

Alignment (schematic)

SEQ ID NO 2

99.02% cov
CY012786

98.74% cov

Alignment Length
1,415 bp
Influenza A virus (A/New York/779/1993(H3N2))
Influenza A virus (A/New York/779/1993(H3N2))
Public DB hit
GI:110629809
CY012778

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

99.65%

Coverage

99.02%

Alignment (schematic)

SEQ ID NO 2

99.02% cov
CY012778

98.74% cov

Alignment Length
1,415 bp
Influenza A virus (A/New York/762/1993(H3N2))
Influenza A virus (A/New York/762/1993(H3N2))
Public DB hit
GI:109915343
CY012162

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

99.65%

Coverage

99.02%

Alignment (schematic)

SEQ ID NO 2

99.02% cov
CY012162

98.54% cov

Alignment Length
1,415 bp
Influenza A virus (A/New York/778/1993(H3N2))
Influenza A virus (A/New York/778/1993(H3N2))
Public DB hit
GI:110629790
CY012770

Hit length
1,431 bp

E Value
0E0

BLAST Score
2,582.7 bits

Similarity

99.65%

Coverage

98.95%

Alignment (schematic)

SEQ ID NO 2

98.95% cov
CY012770

98.74% cov

Alignment Length
1,414 bp
Influenza A virus (A/New York/770/1993(H3N2))
Influenza A virus (A/New York/770/1993(H3N2))
Public DB hit
GI:110629714
CY012738

Hit length
1,431 bp

E Value
0E0

BLAST Score
2,582.7 bits

Similarity

99.65%

Coverage

98.95%

Alignment (schematic)

SEQ ID NO 2

98.95% cov
CY012738

98.74% cov

Alignment Length
1,414 bp
Influenza A virus (A/Nanchang/12/1993(H3N2))
Influenza A virus (A/Nanchang/12/1993(H3N2))
Public DB hit
GI:89112208
CY009014

Hit length
1,451 bp

E Value
0E0

BLAST Score
2,582.7 bits

Similarity

99.65%

Coverage

98.95%

Alignment (schematic)

SEQ ID NO 2

98.95% cov
CY009014

97.38% cov

Alignment Length
1,414 bp
Influenza A virus (A/Nanchang/A2/1994(H3N2))
Influenza A virus (A/Nanchang/A2/1994(H3N2))
Public DB hit
GI:87044880
CY006333

Hit length
1,434 bp

E Value
0E0

BLAST Score
2,582.7 bits

Similarity

99.65%

Coverage

98.95%

Alignment (schematic)

SEQ ID NO 2

98.95% cov
CY006333

98.54% cov

Alignment Length
1,414 bp
Influenza A virus (A/Nanchang/A1/1994(H3N2))
Influenza A virus (A/Nanchang/A1/1994(H3N2))
Public DB hit
GI:84874418
CY007837

Hit length
1,444 bp

E Value
0E0

BLAST Score
2,582.7 bits

Similarity

99.65%

Coverage

98.95%

Alignment (schematic)

SEQ ID NO 2

98.95% cov
CY007837

97.85% cov

Alignment Length
1,414 bp
Influenza A virus (A/Nanchang/58/1993(H3N2))
Influenza A virus (A/Nanchang/58/1993(H3N2))
Public DB hit
GI:82494678
CY006349

Hit length
1,446 bp

E Value
0E0

BLAST Score
2,582.7 bits

Similarity

99.65%

Coverage

98.95%

Alignment (schematic)

SEQ ID NO 2

98.95% cov
CY006349

97.72% cov

Alignment Length
1,414 bp
Influenza A virus (A/Nanchang/0058/1994(H3N2))
Influenza A virus (A/Nanchang/0058/1994(H3N2))
Public DB hit
GI:82494659
CY006341

Hit length
1,434 bp

E Value
0E0

BLAST Score
2,582.7 bits

Similarity

99.65%

Coverage

98.95%

Alignment (schematic)

SEQ ID NO 2

98.95% cov
CY006341

98.54% cov

Alignment Length
1,414 bp

Occurrence

31 times in PatSeqDB

in 2 families
(1 referenced in claims)
in 31 documents

Tools

SEQ ID NO

Length

1,755

Sequence Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism

Influenza A virus

Determined organism

Influenza A virus (A/New York/690/1995(H3N2))
Influenza A virus (A/New York/690/1995(H3N2))
Public DB hit
GI:110733592
CY012920

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.42%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012920

100% cov

Alignment Length
1,721 bp

CIGAR string
21H217MN199MN206MN32MN74MN390MN209MN62MN203MN23MN96M13H mismatches: 10 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/667/1995(H3N2))
Influenza A virus (A/New York/667/1995(H3N2))
Public DB hit
GI:110629107
CY012488

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.42%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012488

100% cov

Alignment Length
1,721 bp

CIGAR string
21H217MN199MN206MN32MN74MN390MN209MN62MN203MN23MN96M13H mismatches: 10 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/666/1995(H3N2))
Influenza A virus (A/New York/666/1995(H3N2))
Public DB hit
GI:110629088
CY012480

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.42%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012480

100% cov

Alignment Length
1,721 bp

CIGAR string
21H217MN199MN206MN32MN74MN390MN209MN62MN203MN23MN96M13H mismatches: 10 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/675/1995(H3N2))
Influenza A virus (A/New York/675/1995(H3N2))
Public DB hit
GI:110332252
CY012240

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.42%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012240

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/689/1995(H3N2))
Influenza A virus (A/New York/689/1995(H3N2))
Public DB hit
GI:109914591
CY011848

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.42%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011848

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/680/1995(H3N2))
Influenza A virus (A/New York/680/1995(H3N2))
Public DB hit
GI:117572862
CY017283

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.36%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY017283

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/691/1995(H3N2))
Influenza A virus (A/New York/691/1995(H3N2))
Public DB hit
GI:110629164
CY012512

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.36%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012512

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/661/1994(H3N2))
Influenza A virus (A/New York/661/1994(H3N2))
Public DB hit
GI:110629029
CY012456

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.36%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012456

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/677/1995(H3N2))
Influenza A virus (A/New York/677/1995(H3N2))
Public DB hit
GI:110332271
CY012248

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.36%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012248

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/659/1994(H3N2))
Influenza A virus (A/New York/659/1994(H3N2))
Public DB hit
GI:109675627
CY011504

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.36%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011504

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/698/1995(H3N2))
Influenza A virus (A/New York/698/1995(H3N2))
Public DB hit
GI:109159609
CY011352

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.36%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011352

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/663/1994(H3N2))
Influenza A virus (A/New York/663/1994(H3N2))
Public DB hit
GI:110629050
CY012464

Hit length
1,717 bp

E Value
0E0

BLAST Score
3,116.4 bits

Similarity

99.42%

Coverage

97.83%

Alignment (schematic)

SEQ ID NO 3

97.83% cov
CY012464

100% cov

Alignment Length
1,717 bp
Influenza A virus (A/New York/697/1995(H3N2))
Influenza A virus (A/New York/697/1995(H3N2))
Public DB hit
GI:109159590
CY011344

Hit length
1,720 bp

E Value
0E0

BLAST Score
3,116.4 bits

Similarity

99.36%

Coverage

98.01%

Alignment (schematic)

SEQ ID NO 3

98.01% cov
CY011344

100% cov

Alignment Length
1,720 bp
Influenza A virus (A/New York/673/1995(H3N2))
Influenza A virus (A/New York/673/1995(H3N2))
Public DB hit
GI:110733535
CY012896

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,112.7 bits

Similarity

99.3%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012896

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/693/1995(H3N2))
Influenza A virus (A/New York/693/1995(H3N2))
Public DB hit
GI:109675779
CY011568

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,112.7 bits

Similarity

99.3%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011568

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/679/1995(H3N2))
Influenza A virus (A/New York/679/1995(H3N2))
Public DB hit
GI:109675760
CY011560

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,112.7 bits

Similarity

99.3%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011560

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/672/1995(H3N2))
Influenza A virus (A/New York/672/1995(H3N2))
Public DB hit
GI:109675722
CY011544

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,112.7 bits

Similarity

99.3%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011544

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/669/1995(H3N2))
Influenza A virus (A/New York/669/1995(H3N2))
Public DB hit
GI:109675684
CY011528

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,112.7 bits

Similarity

99.3%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011528

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/665/1994(H3N2))
Influenza A virus (A/New York/665/1994(H3N2))
Public DB hit
GI:109675665
CY011520

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,112.7 bits

Similarity

99.3%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011520

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/658/1995(H3N2))
Influenza A virus (A/New York/658/1995(H3N2))
Public DB hit
GI:109675608
CY011496

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,112.7 bits

Similarity

99.3%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011496

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/696/1994(H3N2))
Influenza A virus (A/New York/696/1994(H3N2))
Public DB hit
GI:109159571
CY011336

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,112.7 bits

Similarity

99.3%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011336

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/695/1995(H3N2))
Influenza A virus (A/New York/695/1995(H3N2))
Public DB hit
GI:109159552
CY011328

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,112.7 bits

Similarity

99.3%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY011328

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/683/1995(H3N2))
Influenza A virus (A/New York/683/1995(H3N2))
Public DB hit
GI:110733554
CY012904

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,107.2 bits

Similarity

99.24%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012904

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/664/1995(H3N2))
Influenza A virus (A/New York/664/1995(H3N2))
Public DB hit
GI:110629069
CY012472

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,107.2 bits

Similarity

99.24%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012472

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/682/1995(H3N2))
Influenza A virus (A/New York/682/1995(H3N2))
Public DB hit
GI:110332290
CY012256

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,107.2 bits

Similarity

99.24%

Coverage

98.06%

Alignment (schematic)

SEQ ID NO 3

98.06% cov
CY012256

100% cov

Alignment Length
1,721 bp

Occurrence

31 times in PatSeqDB

in 2 families
(1 referenced in claims)
in 31 documents

Tools

SEQ ID NO

Length

1,354

Sequence Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism

Influenza A virus

Determined organism

Influenza A virus (A/Johannesburg/33/1994(H3N2))
Influenza A virus (A/Johannesburg/33/1994(H3N2))
Public DB hit
GI:22859372
AJ457946

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,479.3 bits

Similarity

99.7%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
AJ457946

92.42% cov

Alignment Length
1,354 bp

CIGAR string
3MN237MN163MN944MN3M mismatches: 4 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/789/1993(H3N2))
Influenza A virus (A/New York/789/1993(H3N2))
Public DB hit
GI:112789169
CY013703

Hit length
1,414 bp

E Value
0E0

BLAST Score
2,466.4 bits

Similarity

99.56%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY013703

95.76% cov

Alignment Length
1,354 bp

CIGAR string
1H3MI401MN323MN285MN23MN310MN3M mismatches: 5 - insertions: 1 - deletions: 0
Influenza A virus (A/New York/773/1993(H3N2))
Influenza A virus (A/New York/773/1993(H3N2))
Public DB hit
GI:112789036
CY013647

Hit length
1,436 bp

E Value
0E0

BLAST Score
2,466.4 bits

Similarity

99.56%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY013647

94.29% cov

Alignment Length
1,354 bp

CIGAR string
1H3MI401MN323MN285MN23MN310MN3M mismatches: 5 - insertions: 1 - deletions: 0
Influenza A virus (A/New York/767/1993(H3N2))
Influenza A virus (A/New York/767/1993(H3N2))
Public DB hit
GI:110629695
CY012730

Hit length
1,429 bp

E Value
0E0

BLAST Score
2,466.4 bits

Similarity

99.56%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY012730

94.75% cov

Alignment Length
1,354 bp
Influenza A virus (A/Hong Kong/14/1992(H3N2))
Influenza A virus (A/Hong Kong/14/1992(H3N2))
Public DB hit
GI:77863324
CY003714

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,466.4 bits

Similarity

99.56%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY003714

92.42% cov

Alignment Length
1,354 bp
Influenza A virus H3N2
Influenza A virus H3N2
Public DB hit
GI:1517881
U43425

Hit length
1,410 bp

E Value
0E0

BLAST Score
2,466.4 bits

Similarity

99.63%

Coverage

99.7%

Alignment (schematic)

SEQ ID NO 4

99.7% cov
U43425

95.74% cov

Alignment Length
1,350 bp
Influenza A virus (A/New York/796/1993(H3N2))
Influenza A virus (A/New York/796/1993(H3N2))
Public DB hit
GI:113171542
CY014153

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY014153

94.55% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/802/1993(H3N2))
Influenza A virus (A/New York/802/1993(H3N2))
Public DB hit
GI:112789359
CY013783

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY013783

94.55% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/780/1993(H3N2))
Influenza A virus (A/New York/780/1993(H3N2))
Public DB hit
GI:112789093
CY013671

Hit length
1,431 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY013671

94.62% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/776/1993(H3N2))
Influenza A virus (A/New York/776/1993(H3N2))
Public DB hit
GI:112789074
CY013663

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY013663

94.55% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/785/1993(H3N2))
Influenza A virus (A/New York/785/1993(H3N2))
Public DB hit
GI:110734289
CY013210

Hit length
1,429 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY013210

94.75% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/783/1993(H3N2))
Influenza A virus (A/New York/783/1993(H3N2))
Public DB hit
GI:110734270
CY013202

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY013202

94.55% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/781/1993(H3N2))
Influenza A virus (A/New York/781/1993(H3N2))
Public DB hit
GI:110734232
CY013186

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY013186

94.36% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/755/1993(H3N2))
Influenza A virus (A/New York/755/1993(H3N2))
Public DB hit
GI:110734213
CY013178

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY013178

94.55% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/690/1995(H3N2))
Influenza A virus (A/New York/690/1995(H3N2))
Public DB hit
GI:110733597
CY012922

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY012922

94.36% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/686/1995(H3N2))
Influenza A virus (A/New York/686/1995(H3N2))
Public DB hit
GI:110733578
CY012914

Hit length
1,428 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.56%

Coverage

99.7%

Alignment (schematic)

SEQ ID NO 4

99.7% cov
CY012914

94.54% cov

Alignment Length
1,350 bp
Influenza A virus (A/New York/683/1995(H3N2))
Influenza A virus (A/New York/683/1995(H3N2))
Public DB hit
GI:110733559
CY012906

Hit length
1,428 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.56%

Coverage

99.7%

Alignment (schematic)

SEQ ID NO 4

99.7% cov
CY012906

94.54% cov

Alignment Length
1,350 bp
Influenza A virus (A/New York/775/1993(H3N2))
Influenza A virus (A/New York/775/1993(H3N2))
Public DB hit
GI:110629752
CY012754

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY012754

94.55% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/663/1994(H3N2))
Influenza A virus (A/New York/663/1994(H3N2))
Public DB hit
GI:110629055
CY012466

Hit length
1,428 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.56%

Coverage

99.7%

Alignment (schematic)

SEQ ID NO 4

99.7% cov
CY012466

94.54% cov

Alignment Length
1,350 bp
Influenza A virus (A/New York/682/1995(H3N2))
Influenza A virus (A/New York/682/1995(H3N2))
Public DB hit
GI:110332295
CY012258

Hit length
1,428 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.56%

Coverage

99.7%

Alignment (schematic)

SEQ ID NO 4

99.7% cov
CY012258

94.54% cov

Alignment Length
1,350 bp
Influenza A virus (A/New York/675/1995(H3N2))
Influenza A virus (A/New York/675/1995(H3N2))
Public DB hit
GI:110332257
CY012242

Hit length
1,436 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY012242

94.29% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/765/1993(H3N2))
Influenza A virus (A/New York/765/1993(H3N2))
Public DB hit
GI:109915400
CY012186

Hit length
1,431 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY012186

94.62% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/761/1993(H3N2))
Influenza A virus (A/New York/761/1993(H3N2))
Public DB hit
GI:109915324
CY012154

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY012154

94.36% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/759/1993(H3N2))
Influenza A virus (A/New York/759/1993(H3N2))
Public DB hit
GI:109915286
CY012138

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY012138

94.55% cov

Alignment Length
1,354 bp
Influenza A virus (A/New York/756/1993(H3N2))
Influenza A virus (A/New York/756/1993(H3N2))
Public DB hit
GI:109915247
CY012122

Hit length
1,433 bp

E Value
0E0

BLAST Score
2,460.9 bits

Similarity

99.48%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 4

99.93% cov
CY012122

94.49% cov

Alignment Length
1,354 bp

Occurrence

31 times in PatSeqDB

in 2 families
(1 referenced in claims)
in 31 documents

Tools

SEQ ID NO

Length

1,762

Sequence Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism

Influenza A virus

Determined organism

Influenza A virus (A/X-119(Puerto Rico/8/1934-Harbin/15/1992)(H3N2))
Influenza A virus (A/X-119(Puerto Rico/8/1934-Harbin/15/1992)(H3N2))
Public DB hit
GI:257165257
CY045828

Hit length
1,728 bp

E Value
0E0

BLAST Score
3,158.9 bits

Similarity

99.65%

Coverage

98.07%

Alignment (schematic)

SEQ ID NO 5

98.07% cov
CY045828

100% cov

Alignment Length
1,728 bp

CIGAR string
17H308MN319MN10MN94MN502MN412MN77M17H mismatches: 6 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/608/1996(H3N2))
Influenza A virus (A/New York/608/1996(H3N2))
Public DB hit
GI:91127669
CY010628

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,140.4 bits

Similarity

99.59%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY010628

100% cov

Alignment Length
1,722 bp

CIGAR string
21H179MN193MN261MN94MIMD608MN305MN74M20H mismatches: 5 - insertions: 1 - deletions: 1
Influenza A virus (A/Nagasaki/97/95(H3N2))
Influenza A virus (A/Nagasaki/97/95(H3N2))
Public DB hit
GI:6177881
AB019357

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,138.6 bits

Similarity

98.81%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AB019357

100% cov

Alignment Length
1,764 bp

CIGAR string
106MN59MN5MN221MN26MN54MI4MD30MN20MN15MD2MI83MN21MN94MN8MN100MN159MN177MN322MN98MN45MN94M mismatches: 17 - insertions: 2 - deletions: 2
Influenza A virus (A/Nagasaki/48/95(H3N2))
Influenza A virus (A/Nagasaki/48/95(H3N2))
Public DB hit
GI:6177875
AB019354

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,138.6 bits

Similarity

98.81%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AB019354

100% cov

Alignment Length
1,763 bp
Influenza A virus (A/New York/617/1996(H3N2))
Influenza A virus (A/New York/617/1996(H3N2))
Public DB hit
GI:91122831
CY010516

Hit length
1,722 bp

E Value
0E0

BLAST Score
3,134.9 bits

Similarity

99.54%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY010516

99.94% cov

Alignment Length
1,722 bp
Influenza A virus (A/New York/585/1997(H3N2))
Influenza A virus (A/New York/585/1997(H3N2))
Public DB hit
GI:89784104
CY009700

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,134.9 bits

Similarity

99.54%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY009700

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/Vienna/47/96V(H3N2))
Influenza A virus (A/Vienna/47/96V(H3N2))
Public DB hit
GI:15004991
AF017272

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,133 bits

Similarity

98.75%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AF017272

100% cov

Alignment Length
1,763 bp
Influenza A virus (A/Vienna/47/96M(H3N2))
Influenza A virus (A/Vienna/47/96M(H3N2))
Public DB hit
GI:14286338
AF017270

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,133 bits

Similarity

98.75%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AF017270

100% cov

Alignment Length
1,763 bp
Influenza A virus (A/New York/584/1996(H3N2))
Influenza A virus (A/New York/584/1996(H3N2))
Public DB hit
GI:89789540
CY009900

Hit length
1,722 bp

E Value
0E0

BLAST Score
3,125.7 bits

Similarity

99.42%

Coverage

97.73%

Alignment (schematic)

SEQ ID NO 5

97.73% cov
CY009900

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/New York/631/1996(H3N2))
Influenza A virus (A/New York/631/1996(H3N2))
Public DB hit
GI:91130362
CY010716

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.42%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY010716

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/New York/593/1996(H3N2))
Influenza A virus (A/New York/593/1996(H3N2))
Public DB hit
GI:89789869
CY009908

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,123.8 bits

Similarity

99.42%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY009908

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/592/1996(H3N2))
Influenza A virus (A/New York/592/1996(H3N2))
Public DB hit
GI:90571802
CY010036

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.36%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY010036

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/New York/562/1996(H3N2))
Influenza A virus (A/New York/562/1996(H3N2))
Public DB hit
GI:90571707
CY009996

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,118.3 bits

Similarity

99.36%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY009996

100% cov

Alignment Length
1,721 bp
Influenza A virus (A/New York/652/1996(H3N2))
Influenza A virus (A/New York/652/1996(H3N2))
Public DB hit
GI:109914515
CY011816

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,112.7 bits

Similarity

99.3%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY011816

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/Memphis/24/1995(H3N2))
Influenza A virus (A/Memphis/24/1995(H3N2))
Public DB hit
GI:72602386
CY002272

Hit length
1,741 bp

E Value
0E0

BLAST Score
3,105.3 bits

Similarity

98.85%

Coverage

98.81%

Alignment (schematic)

SEQ ID NO 5

98.81% cov
CY002272

100% cov

Alignment Length
1,742 bp
Influenza A virus (A/New York/537/1998(H3N2))
Influenza A virus (A/New York/537/1998(H3N2))
Public DB hit
GI:251831124
CY039880
1 of 2 hits reported for Influenza A virus (A/New York/537/1998(H3N2)).

Hit length
1,722 bp

E Value
0E0

BLAST Score
3,103.5 bits

Similarity

99.19%

Coverage

97.73%

Alignment (schematic)

SEQ ID NO 5

97.73% cov
CY039880

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/New York/556/1996(H3N2))
Influenza A virus (A/New York/556/1996(H3N2))
Public DB hit
GI:110332167
CY012200

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,101.6 bits

Similarity

99.19%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY012200

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/New York/590/1996(H3N2))
Influenza A virus (A/New York/590/1996(H3N2))
Public DB hit
GI:89941362
CY009740

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,101.6 bits

Similarity

99.19%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY009740

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/Switzerland/7729/98(H3N2))
Influenza A virus (A/Switzerland/7729/98(H3N2))
Public DB hit
GI:14487955
AF382318
1 of 2 hits reported for Influenza A virus (A/Switzerland/7729/98(H3N2)).

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,099.8 bits

Similarity

98.41%

Coverage

100%

Alignment (schematic)

SEQ ID NO 5

100% cov
AF382318

100% cov

Alignment Length
1,764 bp
Influenza A virus (A/New York/599/1996(H3N2))
Influenza A virus (A/New York/599/1996(H3N2))
Public DB hit
GI:106896009
CY011128

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,096.1 bits

Similarity

99.13%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY011128

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/New York/555/1996(H3N2))
Influenza A virus (A/New York/555/1996(H3N2))
Public DB hit
GI:94959589
CY010796

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,096.1 bits

Similarity

99.13%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY010796

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/New York/572/1996(H3N2))
Influenza A virus (A/New York/572/1996(H3N2))
Public DB hit
GI:91126165
CY010588

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,096.1 bits

Similarity

99.13%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY010588

100% cov

Alignment Length
1,722 bp
Influenza A virus (A/New York/600/1996(H3N2))
Influenza A virus (A/New York/600/1996(H3N2))
Public DB hit
GI:90571878
CY010068

Hit length
1,721 bp

E Value
0E0

BLAST Score
3,096.1 bits

Similarity

99.13%

Coverage

97.67%

Alignment (schematic)

SEQ ID NO 5

97.67% cov
CY010068

100% cov

Alignment Length
1,722 bp

Occurrence

31 times in PatSeqDB

in 2 families
(1 referenced in claims)
in 31 documents

Tools

SEQ ID NO

Length

1,451

Sequence Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism

Influenza A virus

Determined organism

Influenza A virus (A/Nanchang/933/95(H3N2))
Influenza A virus (A/Nanchang/933/95(H3N2))
Public DB hit
GI:22859370
AJ457945

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,662.1 bits

Similarity

99.79%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 6

99.93% cov
AJ457945

98.98% cov

Alignment Length
1,450 bp

CIGAR string
1H17MN379MN801MN250M mismatches: 3 - insertions: 0 - deletions: 0
Influenza A virus (A/X-119(Puerto Rico/8/1934-Harbin/15/1992)(H3N2))
Influenza A virus (A/X-119(Puerto Rico/8/1934-Harbin/15/1992)(H3N2))
Public DB hit
GI:257165262
CY045830

Hit length
1,432 bp

E Value
0E0

BLAST Score
2,640 bits

Similarity

99.93%

Coverage

98.69%

Alignment (schematic)

SEQ ID NO 6

98.69% cov
CY045830

100% cov

Alignment Length
1,432 bp

CIGAR string
19H1181MN250M mismatches: 1 - insertions: 0 - deletions: 0
Influenza A virus (A/Buenos Aires/4459/96(H3N2))
Influenza A virus (A/Buenos Aires/4459/96(H3N2))
Public DB hit
GI:33329929
AF533995

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,625.2 bits

Similarity

99.31%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF533995

98.98% cov

Alignment Length
1,452 bp

CIGAR string
45MN77MN626MN41MN74MN3MN67MD4MI216MN39MN250M mismatches: 8 - insertions: 1 - deletions: 1
Influenza A virus (A/Buenos Aires/32/96(H3N2))
Influenza A virus (A/Buenos Aires/32/96(H3N2))
Public DB hit
GI:33329935
AF533998

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,619.7 bits

Similarity

99.24%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF533998

98.98% cov

Alignment Length
1,452 bp
Influenza A virus (A/Buenos Aires/4559/96(H3N2))
Influenza A virus (A/Buenos Aires/4559/96(H3N2))
Public DB hit
GI:33329931
AF533996

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,619.7 bits

Similarity

99.24%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF533996

98.98% cov

Alignment Length
1,452 bp
Influenza A virus (A/New York/652/1996(H3N2))
Influenza A virus (A/New York/652/1996(H3N2))
Public DB hit
GI:109914520
CY011818

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,617.8 bits

Similarity

99.58%

Coverage

98.9%

Alignment (schematic)

SEQ ID NO 6

98.9% cov
CY011818

100% cov

Alignment Length
1,436 bp
Influenza A virus (A/South Africa/1147/1996(H3N2))
Influenza A virus (A/South Africa/1147/1996(H3N2))
Public DB hit
GI:22859364
AJ457942

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,617.8 bits

Similarity

99.24%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 6

99.93% cov
AJ457942

98.98% cov

Alignment Length
1,451 bp
Influenza A virus (A/Buenos Aires/4634/96(H3N2))
Influenza A virus (A/Buenos Aires/4634/96(H3N2))
Public DB hit
GI:33329933
AF533997

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,614.1 bits

Similarity

99.17%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF533997

98.98% cov

Alignment Length
1,452 bp
Influenza A virus (A/New York/562/1996(H3N2))
Influenza A virus (A/New York/562/1996(H3N2))
Public DB hit
GI:90571712
CY009998

Hit length
1,434 bp

E Value
0E0

BLAST Score
2,604.9 bits

Similarity

99.44%

Coverage

98.83%

Alignment (schematic)

SEQ ID NO 6

98.83% cov
CY009998

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/New York/593/1996(H3N2))
Influenza A virus (A/New York/593/1996(H3N2))
Public DB hit
GI:89789884
CY009910

Hit length
1,434 bp

E Value
0E0

BLAST Score
2,604.9 bits

Similarity

99.44%

Coverage

98.83%

Alignment (schematic)

SEQ ID NO 6

98.83% cov
CY009910

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/New York/584/1996(H3N2))
Influenza A virus (A/New York/584/1996(H3N2))
Public DB hit
GI:89789556
CY009902

Hit length
1,434 bp

E Value
0E0

BLAST Score
2,604.9 bits

Similarity

99.44%

Coverage

98.83%

Alignment (schematic)

SEQ ID NO 6

98.83% cov
CY009902

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/New York/585/1997(H3N2))
Influenza A virus (A/New York/585/1997(H3N2))
Public DB hit
GI:89784116
CY009702

Hit length
1,434 bp

E Value
0E0

BLAST Score
2,604.9 bits

Similarity

99.44%

Coverage

98.83%

Alignment (schematic)

SEQ ID NO 6

98.83% cov
CY009702

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/New York/558/1997(H3N2))
Influenza A virus (A/New York/558/1997(H3N2))
Public DB hit
GI:89782912
CY009646

Hit length
1,434 bp

E Value
0E0

BLAST Score
2,599.4 bits

Similarity

99.37%

Coverage

98.83%

Alignment (schematic)

SEQ ID NO 6

98.83% cov
CY009646

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/Buenos Aires/4098/95(H3N2))
Influenza A virus (A/Buenos Aires/4098/95(H3N2))
Public DB hit
GI:33329927
AF533994

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,597.5 bits

Similarity

98.97%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF533994

98.98% cov

Alignment Length
1,451 bp
Influenza A virus (A/Buenos Aires/4065/95(H3N2))
Influenza A virus (A/Buenos Aires/4065/95(H3N2))
Public DB hit
GI:33329923
AF533992

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,597.5 bits

Similarity

98.97%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF533992

98.98% cov

Alignment Length
1,451 bp
Influenza A virus (A/Buenos Aires/4102/95(H3N2))
Influenza A virus (A/Buenos Aires/4102/95(H3N2))
Public DB hit
GI:33329921
AF533991

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,597.5 bits

Similarity

98.97%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF533991

98.98% cov

Alignment Length
1,451 bp
Influenza A virus (A/Buenos Aires/4064/95(H3N2))
Influenza A virus (A/Buenos Aires/4064/95(H3N2))
Public DB hit
GI:33329919
AF533990

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,597.5 bits

Similarity

98.97%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF533990

98.98% cov

Alignment Length
1,451 bp
Influenza A virus H3N2
Influenza A virus H3N2
Public DB hit
GI:3722174
AF038262

Hit length
1,410 bp

E Value
0E0

BLAST Score
2,593.8 bits

Similarity

99.86%

Coverage

97.17%

Alignment (schematic)

SEQ ID NO 6

97.17% cov
AF038262

100% cov

Alignment Length
1,410 bp
Influenza A virus (A/New York/619/1996(H3N2))
Influenza A virus (A/New York/619/1996(H3N2))
Public DB hit
GI:106896321
CY010686

Hit length
1,436 bp

E Value
0E0

BLAST Score
2,592 bits

Similarity

99.23%

Coverage

98.97%

Alignment (schematic)

SEQ ID NO 6

98.97% cov
CY010686

100% cov

Alignment Length
1,437 bp
Influenza A virus (A/Buenos Aires/4084/95(H3N2))
Influenza A virus (A/Buenos Aires/4084/95(H3N2))
Public DB hit
GI:33329925
AF533993

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,592 bits

Similarity

98.9%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF533993

98.98% cov

Alignment Length
1,451 bp
Influenza A virus (A/New York/606/1995(H3N2))
Influenza A virus (A/New York/606/1995(H3N2))
Public DB hit
GI:91127655
CY010622

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,590.1 bits

Similarity

99.23%

Coverage

98.9%

Alignment (schematic)

SEQ ID NO 6

98.9% cov
CY010622

100% cov

Alignment Length
1,436 bp
Influenza A virus (A/New York/648/1995(H3N2))
Influenza A virus (A/New York/648/1995(H3N2))
Public DB hit
GI:125663558
CY010750

Hit length
1,428 bp

E Value
0E0

BLAST Score
2,588.3 bits

Similarity

99.37%

Coverage

98.41%

Alignment (schematic)

SEQ ID NO 6

98.41% cov
CY010750

100% cov

Alignment Length
1,428 bp
Influenza A virus (A/Buenos Aires/4057/95(H3N2))
Influenza A virus (A/Buenos Aires/4057/95(H3N2))
Public DB hit
GI:33329917
AF533989

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,586.4 bits

Similarity

98.83%

Coverage

100%

Alignment (schematic)

SEQ ID NO 6

100% cov
AF533989

98.98% cov

Alignment Length
1,451 bp
Influenza A virus (A/New York/637/1996(H3N2))
Influenza A virus (A/New York/637/1996(H3N2))
Public DB hit
GI:91131113
CY010734

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

99.16%

Coverage

98.9%

Alignment (schematic)

SEQ ID NO 6

98.9% cov
CY010734

100% cov

Alignment Length
1,436 bp
Influenza A virus (A/Memphis/24/1995(H3N2))
Influenza A virus (A/Memphis/24/1995(H3N2))
Public DB hit
GI:72602391
CY002274

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,584.6 bits

Similarity

98.83%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 6

99.93% cov
CY002274

98.91% cov

Alignment Length
1,451 bp

Occurrence

31 times in PatSeqDB

in 2 families
(1 referenced in claims)
in 31 documents

Tools

SEQ ID NO

Length

1,762

Sequence Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism

Influenza A virus

Determined organism

Influenza A virus (A/New York/448/1998(H3N2))
Influenza A virus (A/New York/448/1998(H3N2))
Public DB hit
GI:77747112
CY003560

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,205.1 bits

Similarity

99.49%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY003560

100% cov

Alignment Length
1,762 bp

CIGAR string
384MN117MN153MN34MN60MN20MN139MN203MN614MN29M mismatches: 9 - insertions: 0 - deletions: 0
Influenza A virus (A/Switzerland/7729/98(H3N2))
Influenza A virus (A/Switzerland/7729/98(H3N2))
Public DB hit
GI:14487955
AF382318
1 of 2 hits reported for Influenza A virus (A/Switzerland/7729/98(H3N2)).

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,205.1 bits

Similarity

99.49%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
AF382318

100% cov

Alignment Length
1,762 bp

CIGAR string
83MN300MN117MN153MN34MN60MN9MN10MN343MN644M mismatches: 9 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/289/1998(H3N2))
Influenza A virus (A/New York/289/1998(H3N2))
Public DB hit
GI:68509112
CY001784

Hit length
1,760 bp

E Value
0E0

BLAST Score
3,201.4 bits

Similarity

99.49%

Coverage

99.89%

Alignment (schematic)

SEQ ID NO 7

99.89% cov
CY001784

100% cov

Alignment Length
1,760 bp

CIGAR string
2H382MN117MN153MN34MN60MN20MN139MN203MN614MN29M mismatches: 9 - insertions: 0 - deletions: 0
Influenza A virus (A/Nagasaki/93/98(H3N2))
Influenza A virus (A/Nagasaki/93/98(H3N2))
Public DB hit
GI:6177879
AB019356

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,194 bits

Similarity

99.38%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
AB019356

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/339/1999(H3N2))
Influenza A virus (A/New York/339/1999(H3N2))
Public DB hit
GI:73761595
CY002576

Hit length
1,760 bp

E Value
0E0

BLAST Score
3,190.3 bits

Similarity

99.38%

Coverage

99.89%

Alignment (schematic)

SEQ ID NO 7

99.89% cov
CY002576

100% cov

Alignment Length
1,760 bp
Influenza A virus (A/New York/283/1999(H3N2))
Influenza A virus (A/New York/283/1999(H3N2))
Public DB hit
GI:72539889
CY002136

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,188.4 bits

Similarity

99.32%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY002136

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/315/1999(H3N2))
Influenza A virus (A/New York/315/1999(H3N2))
Public DB hit
GI:68509272
CY001832

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,171.8 bits

Similarity

99.15%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY001832

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/Nagasaki/76/98(H3N2))
Influenza A virus (A/Nagasaki/76/98(H3N2))
Public DB hit
GI:6177877
AB019355

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,171.8 bits

Similarity

99.15%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
AB019355

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/Sydney/5/1997(H3N2))
Influenza A virus (A/Sydney/5/1997(H3N2))
Public DB hit
GI:226955221
CY039079

Hit length
1,718 bp

E Value
0E0

BLAST Score
3,168.1 bits

Similarity

99.94%

Coverage

97.5%

Alignment (schematic)

SEQ ID NO 7

97.5% cov
CY039079

100% cov

Alignment Length
1,718 bp
Influenza A virus (A/New York/250/1998(H3N2))
Influenza A virus (A/New York/250/1998(H3N2))
Public DB hit
GI:66473594
CY001493

Hit length
1,760 bp

E Value
0E0

BLAST Score
3,168.1 bits

Similarity

99.15%

Coverage

99.89%

Alignment (schematic)

SEQ ID NO 7

99.89% cov
CY001493

100% cov

Alignment Length
1,760 bp
Influenza A virus (A/New York/314/1999(H3N2))
Influenza A virus (A/New York/314/1999(H3N2))
Public DB hit
GI:68509221
CY001824

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,166.3 bits

Similarity

99.09%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY001824

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/336/1999(H3N2))
Influenza A virus (A/New York/336/1999(H3N2))
Public DB hit
GI:68510007
CY001912

Hit length
1,761 bp

E Value
0E0

BLAST Score
3,164.4 bits

Similarity

99.09%

Coverage

99.94%

Alignment (schematic)

SEQ ID NO 7

99.94% cov
CY001912

100% cov

Alignment Length
1,761 bp
Influenza A virus (A/New York/456/1999(H3N2))
Influenza A virus (A/New York/456/1999(H3N2))
Public DB hit
GI:77747228
CY003608

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,160.7 bits

Similarity

99.04%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY003608

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/324/1999(H3N2))
Influenza A virus (A/New York/324/1999(H3N2))
Public DB hit
GI:71564613
CY001976

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,160.7 bits

Similarity

99.04%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY001976

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/338/1999(H3N2))
Influenza A virus (A/New York/338/1999(H3N2))
Public DB hit
GI:68510057
CY001928

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,160.7 bits

Similarity

99.04%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY001928

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/333/1999(H3N2))
Influenza A virus (A/New York/333/1999(H3N2))
Public DB hit
GI:68509950
CY001896

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,160.7 bits

Similarity

99.04%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY001896

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/329/1999(H3N2))
Influenza A virus (A/New York/329/1999(H3N2))
Public DB hit
GI:68509892
CY001888

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,160.7 bits

Similarity

99.04%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY001888

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/550/1998(H3N2))
Influenza A virus (A/New York/550/1998(H3N2))
Public DB hit
GI:86824102
CY008980

Hit length
1,730 bp

E Value
0E0

BLAST Score
3,157 bits

Similarity

99.6%

Coverage

98.18%

Alignment (schematic)

SEQ ID NO 7

98.18% cov
CY008980

100% cov

Alignment Length
1,730 bp
Influenza A virus (A/New York/335/1999(H3N2))
Influenza A virus (A/New York/335/1999(H3N2))
Public DB hit
GI:68509986
CY001904

Hit length
1,760 bp

E Value
0E0

BLAST Score
3,157 bits

Similarity

99.03%

Coverage

99.89%

Alignment (schematic)

SEQ ID NO 7

99.89% cov
CY001904

100% cov

Alignment Length
1,760 bp
Influenza A virus (A/New York/277/1999(H3N2))
Influenza A virus (A/New York/277/1999(H3N2))
Public DB hit
GI:68509006
CY001744

Hit length
1,739 bp

E Value
0E0

BLAST Score
3,157 bits

Similarity

99.42%

Coverage

98.69%

Alignment (schematic)

SEQ ID NO 7

98.69% cov
CY001744

100% cov

Alignment Length
1,739 bp
Influenza A virus (A/New York/458/1999(H3N2))
Influenza A virus (A/New York/458/1999(H3N2))
Public DB hit
GI:77747266
CY003624

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,155.2 bits

Similarity

98.98%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY003624

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/331/1999(H3N2))
Influenza A virus (A/New York/331/1999(H3N2))
Public DB hit
GI:71564632
CY001984

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,155.2 bits

Similarity

98.98%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY001984

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/323/1999(H3N2))
Influenza A virus (A/New York/323/1999(H3N2))
Public DB hit
GI:68509359
CY001872

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,155.2 bits

Similarity

98.98%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY001872

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/321/1999(H3N2))
Influenza A virus (A/New York/321/1999(H3N2))
Public DB hit
GI:68509330
CY001864

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,155.2 bits

Similarity

98.98%

Coverage

100%

Alignment (schematic)

SEQ ID NO 7

100% cov
CY001864

100% cov

Alignment Length
1,762 bp

Occurrence

31 times in PatSeqDB

in 2 families
(1 referenced in claims)
in 31 documents

Tools

SEQ ID NO

Length

1,467

Sequence Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism

Influenza A virus

Determined organism

Influenza A virus (A/Sydney/5/1997(H3N2))
Influenza A virus (A/Sydney/5/1997(H3N2))
Public DB hit
GI:12038911
AJ291403
1 of 2 hits reported for Influenza A virus (A/Sydney/5/1997(H3N2)).

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,697.2 bits

Similarity

99.86%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
AJ291403

100% cov

Alignment Length
1,467 bp

CIGAR string
15MN1435MD15M mismatches: 1 - insertions: 0 - deletions: 1
Influenza A virus (A/Genoa/5/98(H3N2))
Influenza A virus (A/Genoa/5/98(H3N2))
Public DB hit
GI:22859362
AJ457941

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,689.8 bits

Similarity

99.8%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 8

99.93% cov
AJ457941

100% cov

Alignment Length
1,467 bp

CIGAR string
1H14MI3MD1432MD15M mismatches: 0 - insertions: 1 - deletions: 2
Influenza A virus (A/Santa Fe/5456/97(H3N2))
Influenza A virus (A/Santa Fe/5456/97(H3N2))
Public DB hit
GI:33329937
AF533999

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,675.1 bits

Similarity

99.59%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
AF533999

100% cov

Alignment Length
1,468 bp

CIGAR string
15MI3MD368MN725MN238MN98MD15M mismatches: 3 - insertions: 1 - deletions: 2
Influenza A virus (A/La Plata/12089/97(H3N2))
Influenza A virus (A/La Plata/12089/97(H3N2))
Public DB hit
GI:33329939
AF534000

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,664 bits

Similarity

99.46%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
AF534000

100% cov

Alignment Length
1,468 bp
Influenza A virus (A/New York/501/1997(H3N2))
Influenza A virus (A/New York/501/1997(H3N2))
Public DB hit
GI:82502241
CY006445

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,645.5 bits

Similarity

99.93%

Coverage

97.82%

Alignment (schematic)

SEQ ID NO 8

97.82% cov
CY006445

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/New York/538/1998(H3N2))
Influenza A virus (A/New York/538/1998(H3N2))
Public DB hit
GI:83314261
CY006805

Hit length
1,436 bp

E Value
0E0

BLAST Score
2,641.8 bits

Similarity

99.86%

Coverage

97.89%

Alignment (schematic)

SEQ ID NO 8

97.89% cov
CY006805

100% cov

Alignment Length
1,436 bp
Influenza A virus (A/New York/536/1998(H3N2))
Influenza A virus (A/New York/536/1998(H3N2))
Public DB hit
GI:90571693
CY009990

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,640 bits

Similarity

99.86%

Coverage

97.82%

Alignment (schematic)

SEQ ID NO 8

97.82% cov
CY009990

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/New York/550/1998(H3N2))
Influenza A virus (A/New York/550/1998(H3N2))
Public DB hit
GI:86824154
CY008982

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,640 bits

Similarity

99.86%

Coverage

97.82%

Alignment (schematic)

SEQ ID NO 8

97.82% cov
CY008982

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/New York/535/1998(H3N2))
Influenza A virus (A/New York/535/1998(H3N2))
Public DB hit
GI:83026969
CY006773

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,640 bits

Similarity

99.86%

Coverage

97.82%

Alignment (schematic)

SEQ ID NO 8

97.82% cov
CY006773

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/New York/545/1997(H3N2))
Influenza A virus (A/New York/545/1997(H3N2))
Public DB hit
GI:82504884
CY006613

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,640 bits

Similarity

99.86%

Coverage

97.82%

Alignment (schematic)

SEQ ID NO 8

97.82% cov
CY006613

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/Buenos Aires/4459/96(H3N2))
Influenza A virus (A/Buenos Aires/4459/96(H3N2))
Public DB hit
GI:33329929
AF533995

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,636.3 bits

Similarity

99.11%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
AF533995

100% cov

Alignment Length
1,468 bp
Influenza A virus (A/New York/540/1998(H3N2))
Influenza A virus (A/New York/540/1998(H3N2))
Public DB hit
GI:86816427
CY008966

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,634.4 bits

Similarity

99.79%

Coverage

97.82%

Alignment (schematic)

SEQ ID NO 8

97.82% cov
CY008966

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/New York/533/1998(H3N2))
Influenza A virus (A/New York/533/1998(H3N2))
Public DB hit
GI:82504745
CY006565

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,634.4 bits

Similarity

99.79%

Coverage

97.82%

Alignment (schematic)

SEQ ID NO 8

97.82% cov
CY006565

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/Hong Kong/CUHK10954/1998(H3N2))
Influenza A virus (A/Hong Kong/CUHK10954/1998(H3N2))
Public DB hit
GI:194269102
EU857110

Hit length
1,446 bp

E Value
0E0

BLAST Score
2,632.6 bits

Similarity

99.52%

Coverage

98.64%

Alignment (schematic)

SEQ ID NO 8

98.64% cov
EU857110

100% cov

Alignment Length
1,447 bp
Influenza A virus (A/New York/532/1998(H3N2))
Influenza A virus (A/New York/532/1998(H3N2))
Public DB hit
GI:82504717
CY006557

Hit length
1,434 bp

E Value
0E0

BLAST Score
2,632.6 bits

Similarity

99.79%

Coverage

97.75%

Alignment (schematic)

SEQ ID NO 8

97.75% cov
CY006557

100% cov

Alignment Length
1,434 bp
Influenza A virus (A/Buenos Aires/32/96(H3N2))
Influenza A virus (A/Buenos Aires/32/96(H3N2))
Public DB hit
GI:33329935
AF533998

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,630.7 bits

Similarity

99.05%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
AF533998

100% cov

Alignment Length
1,468 bp
Influenza A virus (A/Buenos Aires/4559/96(H3N2))
Influenza A virus (A/Buenos Aires/4559/96(H3N2))
Public DB hit
GI:33329931
AF533996

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,630.7 bits

Similarity

99.05%

Coverage

100%

Alignment (schematic)

SEQ ID NO 8

100% cov
AF533996

100% cov

Alignment Length
1,468 bp
Influenza A virus (A/New York/528/1998(H3N2))
Influenza A virus (A/New York/528/1998(H3N2))
Public DB hit
GI:82502824
CY006541

Hit length
1,436 bp

E Value
0E0

BLAST Score
2,630.7 bits

Similarity

99.72%

Coverage

97.89%

Alignment (schematic)

SEQ ID NO 8

97.89% cov
CY006541

100% cov

Alignment Length
1,436 bp
Influenza A virus (A/New York/529/1998(H3N2))
Influenza A virus (A/New York/529/1998(H3N2))
Public DB hit
GI:86818947
CY008950

Hit length
1,435 bp

E Value
0E0

BLAST Score
2,628.9 bits

Similarity

99.72%

Coverage

97.82%

Alignment (schematic)

SEQ ID NO 8

97.82% cov
CY008950

100% cov

Alignment Length
1,435 bp
Influenza A virus (A/South Africa/1147/1996(H3N2))
Influenza A virus (A/South Africa/1147/1996(H3N2))
Public DB hit
GI:22859364
AJ457942

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,628.9 bits

Similarity

99.05%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 8

99.93% cov
AJ457942

100% cov

Alignment Length
1,466 bp
Influenza A virus (A/Hong Kong/CUHK41459/1997(H3N2))
Influenza A virus (A/Hong Kong/CUHK41459/1997(H3N2))
Public DB hit
GI:194269450
EU857284

Hit length
1,446 bp

E Value
0E0

BLAST Score
2,627.1 bits

Similarity

99.45%

Coverage

98.64%

Alignment (schematic)

SEQ ID NO 8

98.64% cov
EU857284

100% cov

Alignment Length
1,447 bp
Influenza A virus (A/Hong Kong/CUHK10554/1998(H3N2))
Influenza A virus (A/Hong Kong/CUHK10554/1998(H3N2))
Public DB hit
GI:194269092
EU857105

Hit length
1,443 bp

E Value
0E0

BLAST Score
2,627.1 bits

Similarity

99.52%

Coverage

98.43%

Alignment (schematic)

SEQ ID NO 8

98.43% cov
EU857105

100% cov

Alignment Length
1,444 bp
Influenza A virus (A/New York/517/1998(H3N2))
Influenza A virus (A/New York/517/1998(H3N2))
Public DB hit
GI:81238334
CY006285

Hit length
1,456 bp

E Value
0E0

BLAST Score
2,627.1 bits

Similarity

99.38%

Coverage

98.77%

Alignment (schematic)

SEQ ID NO 8

98.77% cov
CY006285

99.52% cov

Alignment Length
1,449 bp
Influenza A virus (A/New York/546/1998(H3N2))
Influenza A virus (A/New York/546/1998(H3N2))
Public DB hit
GI:82506284
CY006621

Hit length
1,434 bp

E Value
0E0

BLAST Score
2,621.5 bits

Similarity

99.65%

Coverage

97.75%

Alignment (schematic)

SEQ ID NO 8

97.75% cov
CY006621

100% cov

Alignment Length
1,434 bp

Occurrence

31 times in PatSeqDB

in 2 families
(1 referenced in claims)
in 31 documents

Tools

SEQ ID NO

Length

1,762

Sequence Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism

Influenza A virus

Determined organism

Influenza A virus (A/New York/338/1999(H3N2))
Influenza A virus (A/New York/338/1999(H3N2))
Public DB hit
GI:68510057
CY001928

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,232.8 bits

Similarity

99.77%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001928

100% cov

Alignment Length
1,762 bp

CIGAR string
137MN362MN123MN1023MN113M mismatches: 4 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/333/1999(H3N2))
Influenza A virus (A/New York/333/1999(H3N2))
Public DB hit
GI:68509950
CY001896

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,232.8 bits

Similarity

99.77%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001896

100% cov

Alignment Length
1,762 bp

CIGAR string
137MN362MN123MN1023MN113M mismatches: 4 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/329/1999(H3N2))
Influenza A virus (A/New York/329/1999(H3N2))
Public DB hit
GI:68509892
CY001888

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,232.8 bits

Similarity

99.77%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001888

100% cov

Alignment Length
1,762 bp

CIGAR string
137MN362MN123MN1023MN113M mismatches: 4 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/282/1999(H3N2))
Influenza A virus (A/New York/282/1999(H3N2))
Public DB hit
GI:68509076
CY001768

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,232.8 bits

Similarity

99.77%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001768

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/331/1999(H3N2))
Influenza A virus (A/New York/331/1999(H3N2))
Public DB hit
GI:71564632
CY001984

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.72%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001984

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/323/1999(H3N2))
Influenza A virus (A/New York/323/1999(H3N2))
Public DB hit
GI:68509359
CY001872

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.72%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001872

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/321/1999(H3N2))
Influenza A virus (A/New York/321/1999(H3N2))
Public DB hit
GI:68509330
CY001864

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.72%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001864

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/320/1999(H3N2))
Influenza A virus (A/New York/320/1999(H3N2))
Public DB hit
GI:68509292
CY001856

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.72%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001856

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/317/1999(H3N2))
Influenza A virus (A/New York/317/1999(H3N2))
Public DB hit
GI:68509248
CY001840

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.72%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001840

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/314/1999(H3N2))
Influenza A virus (A/New York/314/1999(H3N2))
Public DB hit
GI:68509221
CY001824

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.72%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001824

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/279/1999(H3N2))
Influenza A virus (A/New York/279/1999(H3N2))
Public DB hit
GI:68509040
CY001752

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,227.2 bits

Similarity

99.72%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001752

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/328/1998(H3N2))
Influenza A virus (A/New York/328/1998(H3N2))
Public DB hit
GI:73665727
CY002376

Hit length
1,761 bp

E Value
0E0

BLAST Score
3,225.4 bits

Similarity

99.72%

Coverage

99.94%

Alignment (schematic)

SEQ ID NO 9

99.94% cov
CY002376

100% cov

Alignment Length
1,761 bp
Influenza A virus (A/New York/280/1999(H3N2))
Influenza A virus (A/New York/280/1999(H3N2))
Public DB hit
GI:68509058
CY001760

Hit length
1,761 bp

E Value
0E0

BLAST Score
3,225.4 bits

Similarity

99.72%

Coverage

99.94%

Alignment (schematic)

SEQ ID NO 9

99.94% cov
CY001760

100% cov

Alignment Length
1,761 bp
Influenza A virus (A/New York/248/1999(H3N2))
Influenza A virus (A/New York/248/1999(H3N2))
Public DB hit
GI:68525439
CY001688

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,223.5 bits

Similarity

99.66%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001688

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/253/1999(H3N2))
Influenza A virus (A/New York/253/1999(H3N2))
Public DB hit
GI:67049732
CY001576

Hit length
1,760 bp

E Value
0E0

BLAST Score
3,223.5 bits

Similarity

99.72%

Coverage

99.89%

Alignment (schematic)

SEQ ID NO 9

99.89% cov
CY001576

100% cov

Alignment Length
1,760 bp
Influenza A virus (A/Panama/2007/1999(H3N2))
Influenza A virus (A/Panama/2007/1999(H3N2))
Public DB hit
GI:92090507
DQ487340

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,221.7 bits

Similarity

99.66%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
DQ487340

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/313/1998(H3N2))
Influenza A virus (A/New York/313/1998(H3N2))
Public DB hit
GI:68509185
CY001816

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,221.7 bits

Similarity

99.66%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001816

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/332/1999(H3N2))
Influenza A virus (A/New York/332/1999(H3N2))
Public DB hit
GI:71564651
CY001992

Hit length
1,761 bp

E Value
0E0

BLAST Score
3,219.8 bits

Similarity

99.66%

Coverage

99.94%

Alignment (schematic)

SEQ ID NO 9

99.94% cov
CY001992

100% cov

Alignment Length
1,761 bp
Influenza A virus (A/New York/261/1999(H3N2))
Influenza A virus (A/New York/261/1999(H3N2))
Public DB hit
GI:73761519
CY002560

Hit length
1,760 bp

E Value
0E0

BLAST Score
3,218 bits

Similarity

99.66%

Coverage

99.89%

Alignment (schematic)

SEQ ID NO 9

99.89% cov
CY002560

100% cov

Alignment Length
1,760 bp
Influenza A virus (A/New York/347/1999(H3N2))
Influenza A virus (A/New York/347/1999(H3N2))
Public DB hit
GI:72598126
CY002296

Hit length
1,760 bp

E Value
0E0

BLAST Score
3,218 bits

Similarity

99.66%

Coverage

99.89%

Alignment (schematic)

SEQ ID NO 9

99.89% cov
CY002296

100% cov

Alignment Length
1,760 bp
Influenza A virus (A/New York/327/1999(H3N2))
Influenza A virus (A/New York/327/1999(H3N2))
Public DB hit
GI:68509729
CY001880

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,216.1 bits

Similarity

99.6%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001880

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/288/1999(H3N2))
Influenza A virus (A/New York/288/1999(H3N2))
Public DB hit
GI:68509094
CY001776

Hit length
1,762 bp

E Value
0E0

BLAST Score
3,216.1 bits

Similarity

99.6%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
CY001776

100% cov

Alignment Length
1,762 bp
Influenza A virus (A/New York/459/1999(H3N2))
Influenza A virus (A/New York/459/1999(H3N2))
Public DB hit
GI:77747285
CY003632

Hit length
1,758 bp

E Value
0E0

BLAST Score
3,214.3 bits

Similarity

99.66%

Coverage

99.77%

Alignment (schematic)

SEQ ID NO 9

99.77% cov
CY003632

100% cov

Alignment Length
1,758 bp
Influenza A virus (A/New York/249/1998(H3N2))
Influenza A virus (A/New York/249/1998(H3N2))
Public DB hit
GI:66473576
CY001485

Hit length
1,760 bp

E Value
0E0

BLAST Score
3,212.4 bits

Similarity

99.6%

Coverage

99.89%

Alignment (schematic)

SEQ ID NO 9

99.89% cov
CY001485

100% cov

Alignment Length
1,760 bp
Influenza A virus (A/New York/177/1999(H3N2))
Influenza A virus (A/New York/177/1999(H3N2))
Public DB hit
GI:61970863
CY000721

Hit length
1,760 bp

E Value
0E0

BLAST Score
3,206.9 bits

Similarity

99.55%

Coverage

99.89%

Alignment (schematic)

SEQ ID NO 9

99.89% cov
CY000721

100% cov

Alignment Length
1,760 bp

Occurrence

31 times in PatSeqDB

in 2 families
(1 referenced in claims)
in 31 documents

Tools

SEQ ID NO

Length

1,466

Sequence Type

nucleotide

Locations

Claims, Detailed Description, Summary

Declared organism

Influenza A virus

Determined organism

Influenza A virus (A/Panama/2007/1999(H3N2))
Influenza A virus (A/Panama/2007/1999(H3N2))
Public DB hit
GI:92090497
DQ487337
1 of 3 hits reported for Influenza A virus (A/Panama/2007/1999(H3N2)).

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,708.3 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
DQ487337

100% cov

Alignment Length
1,466 bp

CIGAR string
1466M mismatches: 0 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/327/1999(H3N2))
Influenza A virus (A/New York/327/1999(H3N2))
Public DB hit
GI:68509734
CY001882

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,702.8 bits

Similarity

99.93%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY001882

100% cov

Alignment Length
1,466 bp

CIGAR string
783MN682M mismatches: 1 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/324/1999(H3N2))
Influenza A virus (A/New York/324/1999(H3N2))
Public DB hit
GI:71564618
CY001978

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,697.2 bits

Similarity

99.86%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY001978

100% cov

Alignment Length
1,466 bp

CIGAR string
30MN752MN682M mismatches: 2 - insertions: 0 - deletions: 0
Influenza A virus (A/New York/278/1999(H3N2))
Influenza A virus (A/New York/278/1999(H3N2))
Public DB hit
GI:71564599
CY001970

Hit length
1,463 bp

E Value
0E0

BLAST Score
2,697.2 bits

Similarity

99.93%

Coverage

99.8%

Alignment (schematic)

SEQ ID NO 10

99.8% cov
CY001970

100% cov

Alignment Length
1,463 bp
Influenza A virus (A/New York/315/1999(H3N2))
Influenza A virus (A/New York/315/1999(H3N2))
Public DB hit
GI:68509277
CY001834

Hit length
1,463 bp

E Value
0E0

BLAST Score
2,697.2 bits

Similarity

99.93%

Coverage

99.8%

Alignment (schematic)

SEQ ID NO 10

99.8% cov
CY001834

100% cov

Alignment Length
1,463 bp
Influenza A virus (A/New York/265/1999(H3N2))
Influenza A virus (A/New York/265/1999(H3N2))
Public DB hit
GI:67058333
CY001618

Hit length
1,463 bp

E Value
0E0

BLAST Score
2,697.2 bits

Similarity

99.93%

Coverage

99.8%

Alignment (schematic)

SEQ ID NO 10

99.8% cov
CY001618

100% cov

Alignment Length
1,463 bp
Influenza A virus (A/New York/287/1998(H3N2))
Influenza A virus (A/New York/287/1998(H3N2))
Public DB hit
GI:67062587
CY001674

Hit length
1,464 bp

E Value
0E0

BLAST Score
2,693.5 bits

Similarity

99.86%

Coverage

99.86%

Alignment (schematic)

SEQ ID NO 10

99.86% cov
CY001674

100% cov

Alignment Length
1,464 bp
Influenza A virus (A/New York/250/1998(H3N2))
Influenza A virus (A/New York/250/1998(H3N2))
Public DB hit
GI:66473599
CY001495

Hit length
1,464 bp

E Value
0E0

BLAST Score
2,693.5 bits

Similarity

99.86%

Coverage

99.86%

Alignment (schematic)

SEQ ID NO 10

99.86% cov
CY001495

100% cov

Alignment Length
1,464 bp
Influenza A virus (A/Perugia/5/99(H3N2))
Influenza A virus (A/Perugia/5/99(H3N2))
Public DB hit
GI:22859350
AJ457935

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,689.8 bits

Similarity

99.8%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 10

99.93% cov
AJ457935

100% cov

Alignment Length
1,466 bp
Influenza A virus (A/New York/456/1999(H3N2))
Influenza A virus (A/New York/456/1999(H3N2))
Public DB hit
GI:77747233
CY003610

Hit length
1,466 bp

E Value
0E0

BLAST Score
2,680.6 bits

Similarity

99.66%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
CY003610

100% cov

Alignment Length
1,466 bp
Influenza A virus (A/New York/316/1999(H3N2))
Influenza A virus (A/New York/316/1999(H3N2))
Public DB hit
GI:72545862
CY002162

Hit length
1,463 bp

E Value
0E0

BLAST Score
2,680.6 bits

Similarity

99.73%

Coverage

99.8%

Alignment (schematic)

SEQ ID NO 10

99.8% cov
CY002162

100% cov

Alignment Length
1,463 bp
Influenza A virus (A/Philippines/26/99(H3N2))
Influenza A virus (A/Philippines/26/99(H3N2))
Public DB hit
GI:22859356
AJ457938

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,678.8 bits

Similarity

99.66%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 10

99.93% cov
AJ457938

100% cov

Alignment Length
1,466 bp
Influenza A virus (A/New York/458/1999(H3N2))
Influenza A virus (A/New York/458/1999(H3N2))
Public DB hit
GI:77747271
CY003626

Hit length
1,463 bp

E Value
0E0

BLAST Score
2,675.1 bits

Similarity

99.66%

Coverage

99.8%

Alignment (schematic)

SEQ ID NO 10

99.8% cov
CY003626

100% cov

Alignment Length
1,463 bp
Influenza A virus (A/New York/335/1999(H3N2))
Influenza A virus (A/New York/335/1999(H3N2))
Public DB hit
GI:68509991
CY001906

Hit length
1,463 bp

E Value
0E0

BLAST Score
2,675.1 bits

Similarity

99.66%

Coverage

99.8%

Alignment (schematic)

SEQ ID NO 10

99.8% cov
CY001906

100% cov

Alignment Length
1,463 bp
Influenza A virus (A/Hong Kong/6/99(H3N2))
Influenza A virus (A/Hong Kong/6/99(H3N2))
Public DB hit
GI:22859352
AJ457936

Hit length
1,465 bp

E Value
0E0

BLAST Score
2,673.2 bits

Similarity

99.59%

Coverage

99.93%

Alignment (schematic)

SEQ ID NO 10

99.93% cov
AJ457936

100% cov

Alignment Length
1,466 bp
Influenza A virus (A/Hong Kong/CUHK50722/1998(H3N2))
Influenza A virus (A/Hong Kong/CUHK50722/1998(H3N2))
Public DB hit
GI:194269494
EU857306

Hit length
1,446 bp

E Value
0E0

BLAST Score
2,660.3 bits

Similarity

99.86%

Coverage

98.64%

Alignment (schematic)

SEQ ID NO 10

98.64% cov
EU857306

100% cov

Alignment Length
1,446 bp
Influenza A virus (A/Hong Kong/CUHK50552/1998(H3N2))
Influenza A virus (A/Hong Kong/CUHK50552/1998(H3N2))
Public DB hit
GI:194269488
EU857303

Hit length
1,442 bp

E Value
0E0

BLAST Score
2,652.9 bits

Similarity

99.86%

Coverage

98.36%

Alignment (schematic)

SEQ ID NO 10

98.36% cov
EU857303

100% cov

Alignment Length
1,442 bp
Influenza A virus (A/New York/332/1999(H3N2))
Influenza A virus (A/New York/332/1999(H3N2))
Public DB hit
GI:71564656
CY001994

Hit length
1,463 bp

E Value
0E0

BLAST Score
2,647.4 bits

Similarity

99.32%

Coverage

99.8%

Alignment (schematic)

SEQ ID NO 10

99.8% cov
CY001994

100% cov

Alignment Length
1,463 bp
Influenza A virus (A/New York/137/1999(H3N2))
Influenza A virus (A/New York/137/1999(H3N2))
Public DB hit
GI:63033939
CY001122

Hit length
1,464 bp

E Value
0E0

BLAST Score
2,638.1 bits

Similarity

99.18%

Coverage

99.86%

Alignment (schematic)

SEQ ID NO 10

99.86% cov
CY001122

100% cov

Alignment Length
1,464 bp
Influenza A virus (A/New York/138/1999(H3N2))
Influenza A virus (A/New York/138/1999(H3N2))
Public DB hit
GI:62870031
CY000991

Hit length
1,464 bp

E Value
0E0

BLAST Score
2,638.1 bits

Similarity

99.18%

Coverage

99.86%

Alignment (schematic)

SEQ ID NO 10

99.86% cov
CY000991

100% cov

Alignment Length
1,464 bp
Influenza A virus (A/Hong Kong/CUHK18351/1998(H3N2))
Influenza A virus (A/Hong Kong/CUHK18351/1998(H3N2))
Public DB hit
GI:194269210
EU857164

Hit length
1,446 bp

E Value
0E0

BLAST Score
2,632.6 bits

Similarity

99.52%

Coverage

98.64%

Alignment (schematic)

SEQ ID NO 10

98.64% cov
EU857164

100% cov

Alignment Length
1,446 bp
Influenza A virus (A/Hong Kong/CUHK17697/1998(H3N2))
Influenza A virus (A/Hong Kong/CUHK17697/1998(H3N2))
Public DB hit
GI:194269194
EU857156

Hit length
1,446 bp

E Value
0E0

BLAST Score
2,632.6 bits

Similarity

99.52%

Coverage

98.64%

Alignment (schematic)

SEQ ID NO 10

98.64% cov
EU857156

100% cov

Alignment Length
1,446 bp
Influenza A virus (A/Hong Kong/CUHK16614/1998(H3N2))
Influenza A virus (A/Hong Kong/CUHK16614/1998(H3N2))
Public DB hit
GI:194269186
EU857152

Hit length
1,446 bp

E Value
0E0

BLAST Score
2,632.6 bits

Similarity

99.52%

Coverage

98.64%

Alignment (schematic)

SEQ ID NO 10

98.64% cov
EU857152

100% cov

Alignment Length
1,446 bp

Occurrence

31 times in PatSeqDB

in 2 families
(1 referenced in claims)
in 31 documents

Tools

68 sequences found in this patent (in total)

Filter sequences

Displaying 1 - 10 of 68 sequences

Influenza A virus (A/Shangdong/9/1993(H3N2))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Influenza A virus (A/X-117(Puerto Rico/8/1934-Beijing/32/1992)(H3N2))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Influenza A virus (A/New York/760/1993(H3N2))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Influenza A virus (A/New York/768/1993(H3N2))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Influenza A virus (A/Beijing/32/1992(H3N2))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Influenza A virus (A/New York/803/1993(H3N2))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Influenza A virus (A/New York/788/1993(H3N2))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Influenza A virus (A/New York/781/1993(H3N2))

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Influenza A virus (A/New York/754/1993(H3N2))

Public DB hit