Antibodies Binding To An Intracellular Prl-1 Or Prl-3 Polypeptide

  • Published: Dec 5, 2012
  • Earliest Priority: May 03 2007
  • Family: 25
  • Cited Works: 107
  • Cited by: 0
  • Cites: 27
  • Sequences: 39
  • Additional Info: Cited Works
Data obtained from: EMBL-EBI Pat DDBJ Pat EPO Sequence Listings
39 sequences found in this patent (in total)

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Download sequences in fasta format: 33 peptides 6 DNAs

Displaying 1 - 10 of 39 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
455
Sequence Type
DNA
Locations
Undetermined
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:195663
      M28251
      1 of 20 hits reported for Mus musculus.
    • Hit length
      406 bp
    • E Value
      1.32E-164
    • BLAST Score
      588.4 bits
    • Similarity
      93.1%
    • Coverage
      88.13%
    • Alignment (schematic)

      SEQ ID NO 1
      88.13% cov
      M28251
      99.26% cov
    • Alignment Length
      406 bp
    • CIGAR string
      10H4MN3MD4MNMIMD47MN73MN8MN2MDMI52MN17MN8MN85MN25MN4M4N2M3N3I3MNMN15MN22M44H mismatches: 20 - insertions: 5 - deletions: 3
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:194554
      M19898
      1 of 3 hits reported for Mus musculus domesticus.
    • Hit length
      470 bp
    • E Value
      1.71E-163
    • BLAST Score
      584.7 bits
    • Similarity
      92.94%
    • Coverage
      88.13%
    • Alignment (schematic)

      SEQ ID NO 1
      88.13% cov
      M19898
      86.38% cov
    • Alignment Length
      411 bp
    • CIGAR string
      10H4MN3MD4MNMIMD47M2N71MIMD5M2NMN2MDMI79MN111MNMNIMD3MN4MIMNI2MIMN2IMI12MN25M44H mismatches: 14 - insertions: 10 - deletions: 5
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:225350575
      FJ792805
      1 of 2 hits reported for synthetic construct.
    • Hit length
      780 bp
    • E Value
      3.77E-145
    • BLAST Score
      523.7 bits
    • Similarity
      94.51%
    • Coverage
      75.82%
    • Alignment (schematic)

      SEQ ID NO 1
      75.82% cov
      FJ792805
      43.08% cov
    • Alignment Length
      346 bp
    • CIGAR string
      66H4MN3MNMN71MN8MN2MDMI191MN3MD2MND2MDMD3M5D13MN22M44H mismatches: 8 - insertions: 1 - deletions: 10
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
2
Length
151
Sequence Type
peptide
Locations
Undetermined
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:12750776
      AAA03013
      1 of 21 hits reported for Mus musculus.
    • Hit length
      135 aa
    • E Value
      6.88E-81
    • BLAST Score
      246.1 bits
    • Similarity
      92.59%
    • Coverage
      88.74%
    • Alignment (schematic)

      SEQ ID NO 2
      88.74% cov
      AAA03013
      100% cov
    • Alignment Length
      135 aa
    • CIGAR string
      2HM3NM2N15MN83MN8M3NMNIMN12M15H mismatches: 12 - insertions: 1 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:576598
      AAA53291
      1 of 3 hits reported for Mus musculus domesticus.
    • Hit length
      159 aa
    • E Value
      3.6E-80
    • BLAST Score
      245.4 bits
    • Similarity
      87.58%
    • Coverage
      98.01%
    • Alignment (schematic)

      SEQ ID NO 2
      98.01% cov
      AAA53291
      96.23% cov
    • Alignment Length
      153 aa
    • CIGAR string
      2HM3NM2N15MN26MNMN20MN8MN33MNI2MNMN4IN6M2N4M5NMNMN2M3N1H mismatches: 26 - insertions: 5 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:342358733
      AEL29442
    • Hit length
      465 aa
    • E Value
      6.51E-77
    • BLAST Score
      246.9 bits
    • Similarity
      88.44%
    • Coverage
      96.03%
    • Alignment (schematic)

      SEQ ID NO 2
      96.03% cov
      AEL29442
      31.61% cov
    • Alignment Length
      147 aa
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
3
Length
391
Sequence Type
DNA
Locations
Undetermined
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:2052416
      U88675
      1 of 23 hits reported for Mus musculus.
    • Hit length
      443 bp
    • E Value
      1.16E-139
    • BLAST Score
      505.3 bits
    • Similarity
      98.6%
    • Coverage
      72.89%
    • Alignment (schematic)

      SEQ ID NO 3
      72.89% cov
      U88675
      64.33% cov
    • Alignment Length
      285 bp
    • CIGAR string
      20H63MN2MN10MN17MN189M86H mismatches: 4 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:798810
      L41880
      1 of 2 hits reported for Mus musculus domesticus.
    • Hit length
      390 bp
    • E Value
      2.57E-121
    • BLAST Score
      444.3 bits
    • Similarity
      95.97%
    • Coverage
      69.82%
    • Alignment (schematic)

      SEQ ID NO 3
      69.82% cov
      L41880
      70% cov
    • Alignment Length
      273 bp
    • CIGAR string
      20H63MN2MN10MN17MN26MN112M2N8MN2MN2MN14MN6M98H mismatches: 11 - insertions: 0 - deletions: 0
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
4
Length
127
Sequence Type
peptide
Locations
Undetermined
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:196535
      AAA98514
      1 of 22 hits reported for Mus musculus.
    • Hit length
      146 aa
    • E Value
      1.2E-60
    • BLAST Score
      194.1 bits
    • Similarity
      98.96%
    • Coverage
      75.59%
    • Alignment (schematic)

      SEQ ID NO 4
      75.59% cov
      AAA98514
      65.75% cov
    • Alignment Length
      96 aa
    • CIGAR string
      6H21M2N73M25H mismatches: 2 - insertions: 0 - deletions: 0
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:807029
      AAB32017
    • Hit length
      108 aa
    • E Value
      4.36E-56
    • BLAST Score
      181 bits
    • Similarity
      98.9%
    • Coverage
      71.65%
    • Alignment (schematic)

      SEQ ID NO 4
      71.65% cov
      AAB32017
      84.26% cov
    • Alignment Length
      91 aa
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:798811
      AAC37710
      1 of 2 hits reported for Mus musculus domesticus.
    • Hit length
      130 aa
    • E Value
      1.14E-55
    • BLAST Score
      180.6 bits
    • Similarity
      98.9%
    • Coverage
      71.65%
    • Alignment (schematic)

      SEQ ID NO 4
      71.65% cov
      AAC37710
      70% cov
    • Alignment Length
      91 aa
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
5
Length
473
Sequence Type
DNA
Locations
Undetermined
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:92447466
      BC092295
      1 of 24 hits reported for Mus musculus.
    • Hit length
      1,585 bp
    • E Value
      2.25E-177
    • BLAST Score
      630.8 bits
    • Similarity
      91.72%
    • Coverage
      96.19%
    • Alignment (schematic)

      SEQ ID NO 5
      96.19% cov
      BC092295
      28.71% cov
    • Alignment Length
      459 bp
    • CIGAR string
      7H5MN10MNMIMD17M2N2MN71MN26MN29MN41MN8MN2MN7MN18MN18MN7MN39MN14MN17MND2M2NDM2NMIMI4M2NMN52MN3MN5MNMN8MI2MD2MN5M11H mismatches: 30 - insertions: 4 - deletions: 4
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:765162
      S73918
    • Hit length
      497 bp
    • E Value
      1.77E-168
    • BLAST Score
      601.3 bits
    • Similarity
      95.96%
    • Coverage
      78.22%
    • Alignment (schematic)

      SEQ ID NO 5
      78.22% cov
      S73918
      74.45% cov
    • Alignment Length
      371 bp
    • CIGAR string
      52H187MN18MN99M2NM2NMND2MNMN2MNMNIMN2MN41M51H mismatches: 13 - insertions: 1 - deletions: 1
Occurrence
13 times in PatSeqDB
Tools
SEQ ID NO
6
Length
157
Sequence Type
peptide
Locations
Undetermined
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:110259
      S21810
      1 of 21 hits reported for Mus musculus.
    • Hit length
      138 aa
    • E Value
      1.98E-82
    • BLAST Score
      250.4 bits
    • Similarity
      92.03%
    • Coverage
      87.9%
    • Alignment (schematic)

      SEQ ID NO 6
      87.9% cov
      S21810
      100% cov
    • Alignment Length
      138 aa
    • CIGAR string
      2HMN2M3N70MN5MN32M9N13M17H mismatches: 15 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:196049874
      3DIF_B
    • Hit length
      229 aa
    • E Value
      2.13E-76
    • BLAST Score
      238.4 bits
    • Similarity
      92.54%
    • Coverage
      85.35%
    • Alignment (schematic)

      SEQ ID NO 6
      85.35% cov
      3DIF_B
      58.52% cov
    • Alignment Length
      134 aa
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:554046
      AAA38638
      1 of 3 hits reported for Mus musculus domesticus.
    • Hit length
      138 aa
    • E Value
      7.95E-73
    • BLAST Score
      226.1 bits
    • Similarity
      86.43%
    • Coverage
      89.17%
    • Alignment (schematic)

      SEQ ID NO 6
      89.17% cov
      AAA38638
      100% cov
    • Alignment Length
      140 aa
Occurrence
19 times in PatSeqDB
Tools
SEQ ID NO
7
Length
456
Sequence Type
DNA
Locations
Undetermined
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:82697052
      BC108385
      1 of 16 hits reported for Mus musculus.
    • Hit length
      961 bp
    • E Value
      0E0
    • BLAST Score
      706.5 bits
    • Similarity
      95.48%
    • Coverage
      96.93%
    • Alignment (schematic)

      SEQ ID NO 7
      96.93% cov
      BC108385
      45.99% cov
    • Alignment Length
      442 bp
    • CIGAR string
      9H15MN133M3N9MNMN21MN12MN46MN11MN41MN24MN31MNMN9M3N6MN3MN56MN3M5H mismatches: 20 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:196481
      M92401
      1 of 8 hits reported for Mus musculus domesticus.
    • Hit length
      350 bp
    • E Value
      1.7E-168
    • BLAST Score
      601.3 bits
    • Similarity
      97.43%
    • Coverage
      76.75%
    • Alignment (schematic)

      SEQ ID NO 7
      76.75% cov
      M92401
      100% cov
    • Alignment Length
      350 bp
    • CIGAR string
      69H89M2N10MNMN34MN4M2N52MN82MN69M37H mismatches: 9 - insertions: 0 - deletions: 0
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:260765
      S50265
    • Hit length
      393 bp
    • E Value
      6.11E-168
    • BLAST Score
      599.4 bits
    • Similarity
      94.19%
    • Coverage
      86.18%
    • Alignment (schematic)

      SEQ ID NO 7
      86.18% cov
      S50265
      100% cov
    • Alignment Length
      396 bp
    • CIGAR string
      9H15MN77MN2MN47MN4M2N10MNMN34MN55MN2MN14MN73MN9MDMNMI8MDMD2MI2MI2MN3MN7MN3M54H mismatches: 17 - insertions: 3 - deletions: 3
Occurrence
13 times in PatSeqDB
Tools
SEQ ID NO
8
Length
152
Sequence Type
peptide
Locations
Undetermined
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:19909940
      BAB87194
      1 of 23 hits reported for Mus musculus.
    • Hit length
      149 aa
    • E Value
      6.77E-82
    • BLAST Score
      249.2 bits
    • Similarity
      92.62%
    • Coverage
      98.03%
    • Alignment (schematic)

      SEQ ID NO 8
      98.03% cov
      BAB87194
      100% cov
    • Alignment Length
      149 aa
    • CIGAR string
      3H43MN2MN2M3NM2N2MN8MN6MN7MN31MNMNMNMN3MN25M mismatches: 16 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:196492
      AAA51118
      1 of 2 hits reported for Mus musculus domesticus.
    • Hit length
      117 aa
    • E Value
      2.8E-75
    • BLAST Score
      231.5 bits
    • Similarity
      98.29%
    • Coverage
      76.97%
    • Alignment (schematic)

      SEQ ID NO 8
      76.97% cov
      AAA51118
      100% cov
    • Alignment Length
      117 aa
Occurrence
19 times in PatSeqDB
Tools
SEQ ID NO
9
Length
471
Sequence Type
DNA
Locations
Undetermined
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:12841780
      AK007918
      1 of 24 hits reported for Mus musculus.
    • Hit length
      1,576 bp
    • E Value
      1.73E-178
    • BLAST Score
      634.5 bits
    • Similarity
      91.9%
    • Coverage
      96.18%
    • Alignment (schematic)

      SEQ ID NO 9
      96.18% cov
      AK007918
      28.87% cov
    • Alignment Length
      457 bp
    • CIGAR string
      7H18MI3MD15MN3MN12MN15MN11MN30MN33M2N10M2N28MN15M2N4M2N8MN2MN2MN6MN15MI67MN14MN17MIMN3M2NMI2MD4M2N54MN3MN7MN8MN4MN5M11H mismatches: 31 - insertions: 4 - deletions: 2
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:765162
      S73918
    • Hit length
      497 bp
    • E Value
      6.37E-163
    • BLAST Score
      582.8 bits
    • Similarity
      95.15%
    • Coverage
      78.13%
    • Alignment (schematic)

      SEQ ID NO 9
      78.13% cov
      S73918
      74.45% cov
    • Alignment Length
      371 bp
    • CIGAR string
      52H104MN9MN72MNMN16MI99M2NM2NMIMDMNMN2MNMNIMN2MN41M51H mismatches: 14 - insertions: 3 - deletions: 1
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
10
Length
154
Sequence Type
peptide
Locations
Undetermined
Declared organism
Mus musculus (house mouse)
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:110259
      S21810
      1 of 15 hits reported for Mus musculus.
    • Hit length
      138 aa
    • E Value
      2.16E-51
    • BLAST Score
      171.4 bits
    • Similarity
      89.47%
    • Coverage
      61.69%
    • Alignment (schematic)

      SEQ ID NO 10
      61.69% cov
      S21810
      68.84% cov
    • Alignment Length
      95 aa
    • CIGAR string
      2HMN2M2N43MN2MN24MN5M5NM6N57H mismatches: 17 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:554020
      AAA63339
      1 of 4 hits reported for Mus musculus domesticus.
    • Hit length
      119 aa
    • E Value
      3.79E-46
    • BLAST Score
      157.1 bits
    • Similarity
      84.21%
    • Coverage
      61.69%
    • Alignment (schematic)

      SEQ ID NO 10
      61.69% cov
      AAA63339
      79.83% cov
    • Alignment Length
      95 aa
Occurrence
17 times in PatSeqDB
Tools

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