Method For The Prognosis And Treatment Of Cancer Metastasis

Data obtained from: EMBL-EBI Pat NCBI GenBank USPTO Fulltext DDBJ Pat
13 sequences found in this patent (in total)

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Download sequences in fasta format: 2 peptides 4 nucleotides 7 RNAs

Displaying 1 - 10 of 13 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
6,878
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
Occurrence
85 times in PatSeqDB
Tools
SEQ ID NO
2
Length
2,656
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:197313768
      NM_005360
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      2,656 bp
    • E Value
      0E0
    • BLAST Score
      4,905.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_005360
      100% cov
    • Alignment Length
      2,656 bp
    • CIGAR string
      2656M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114663777
      XM_511123
    • Hit length
      2,761 bp
    • E Value
      0E0
    • BLAST Score
      4,800.6 bits
    • Similarity
      99.43%
    • Coverage
      99.66%
    • Alignment (schematic)

      SEQ ID NO 2
      99.66% cov
      XM_511123
      95.65% cov
    • Alignment Length
      2,647 bp
    • CIGAR string
      27MN176MN149MN436M6D355MN101MN964MN283MN24MN30MN87M9H mismatches: 9 - insertions: 0 - deletions: 6
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332246736
      XM_003272460
    • Hit length
      2,184 bp
    • E Value
      0E0
    • BLAST Score
      3,613.2 bits
    • Similarity
      97.51%
    • Coverage
      79.59%
    • Alignment (schematic)

      SEQ ID NO 2
      79.59% cov
      XM_003272460
      96.89% cov
    • Alignment Length
      2,126 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:32490664
      AC113301
      1 of 2 hits reported for Mus musculus.
    • Hit length
      195,985 bp
    • E Value
      0E0
    • BLAST Score
      2,194.9 bits
    • Similarity
      89.75%
    • Coverage
      64.72%
    • Alignment (schematic)

      SEQ ID NO 2
      64.72% cov
      AC113301
      0.89% cov
    • Alignment Length
      1,775 bp
Occurrence
119 times in PatSeqDB
Tools
SEQ ID NO
3
Length
6,887
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:197313769
      NM_001031804
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      6,887 bp
    • E Value
      0E0
    • BLAST Score
      12,719 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001031804
      100% cov
    • Alignment Length
      6,887 bp
    • CIGAR string
      6887M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332846584
      XM_003315234
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,731 bp
    • E Value
      0E0
    • BLAST Score
      6,704.5 bits
    • Similarity
      99.09%
    • Coverage
      54.28%
    • Alignment (schematic)

      SEQ ID NO 3
      54.28% cov
      XM_003315234
      99.87% cov
    • Alignment Length
      3,743 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194208825
      XM_001916353
    • Hit length
      2,786 bp
    • E Value
      0E0
    • BLAST Score
      2,965 bits
    • Similarity
      92.03%
    • Coverage
      30.93%
    • Alignment (schematic)

      SEQ ID NO 3
      30.93% cov
      XM_001916353
      76.06% cov
    • Alignment Length
      2,171 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332246736
      XM_003272460
    • Hit length
      2,184 bp
    • E Value
      0E0
    • BLAST Score
      2,471.9 bits
    • Similarity
      98.44%
    • Coverage
      20.44%
    • Alignment (schematic)

      SEQ ID NO 3
      20.44% cov
      XM_003272460
      64.1% cov
    • Alignment Length
      1,409 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:32490664
      AC113301
      1 of 2 hits reported for Mus musculus.
    • Hit length
      195,985 bp
    • E Value
      0E0
    • BLAST Score
      2,455.3 bits
    • Similarity
      88.45%
    • Coverage
      29.75%
    • Alignment (schematic)

      SEQ ID NO 3
      29.75% cov
      AC113301
      1.06% cov
    • Alignment Length
      2,113 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:157785606
      NM_001105637
    • Hit length
      1,876 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      91.12%
    • Coverage
      26.51%
    • Alignment (schematic)

      SEQ ID NO 3
      26.51% cov
      NM_001105637
      96% cov
    • Alignment Length
      1,858 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296231632
      XM_002761189
    • Hit length
      1,572 bp
    • E Value
      0E0
    • BLAST Score
      2,259.6 bits
    • Similarity
      97.24%
    • Coverage
      19.34%
    • Alignment (schematic)

      SEQ ID NO 3
      19.34% cov
      XM_002761189
      84.99% cov
    • Alignment Length
      1,341 bp
Occurrence
104 times in PatSeqDB
Tools
SEQ ID NO
4
Length
403
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:5453736
      NP_005351
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      403 aa
    • E Value
      0E0
    • BLAST Score
      817 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_005351
      100% cov
    • Alignment Length
      403 aa
    • CIGAR string
      403M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332246737
      XP_003272508
    • Hit length
      401 aa
    • E Value
      6.78E-154
    • BLAST Score
      548.9 bits
    • Similarity
      95.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003272508
      100% cov
    • Alignment Length
      403 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296231633
      XP_002761235
    • Hit length
      406 aa
    • E Value
      5.15E-152
    • BLAST Score
      542.7 bits
    • Similarity
      96.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002761235
      100% cov
    • Alignment Length
      406 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:9506879
      NP_062191
    • Hit length
      369 aa
    • E Value
      1.56E-132
    • BLAST Score
      478 bits
    • Similarity
      88.74%
    • Coverage
      92.56%
    • Alignment (schematic)

      SEQ ID NO 4
      92.56% cov
      NP_062191
      100% cov
    • Alignment Length
      373 aa
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:41946760
      AAH65941
    • Hit length
      325 aa
    • E Value
      2.74E-108
    • BLAST Score
      397.5 bits
    • Similarity
      77.65%
    • Coverage
      88.83%
    • Alignment (schematic)

      SEQ ID NO 4
      88.83% cov
      AAH65941
      95.08% cov
    • Alignment Length
      358 aa
Occurrence
164 times in PatSeqDB
Tools
SEQ ID NO
5
Length
373
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:73427806
      NP_001026974
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      373 aa
    • E Value
      0E0
    • BLAST Score
      751.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001026974
      100% cov
    • Alignment Length
      373 aa
    • CIGAR string
      373M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332246737
      XP_003272508
    • Hit length
      401 aa
    • E Value
      4.18E-134
    • BLAST Score
      483 bits
    • Similarity
      95.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003272508
      92.52% cov
    • Alignment Length
      373 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:9506879
      NP_062191
    • Hit length
      369 aa
    • E Value
      1.94E-133
    • BLAST Score
      481.1 bits
    • Similarity
      88.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_062191
      100% cov
    • Alignment Length
      373 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296231633
      XP_002761235
    • Hit length
      406 aa
    • E Value
      2.92E-133
    • BLAST Score
      480.3 bits
    • Similarity
      96.54%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002761235
      92.61% cov
    • Alignment Length
      376 aa
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:41946760
      AAH65941
    • Hit length
      325 aa
    • E Value
      4.57E-109
    • BLAST Score
      399.8 bits
    • Similarity
      77.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAH65941
      100% cov
    • Alignment Length
      374 aa
Occurrence
182 times in PatSeqDB
Tools
SEQ ID NO
6
Length
19
Sequence Type
RNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
44 times in PatSeqDB
Tools
SEQ ID NO
7
Length
19
Sequence Type
RNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
44 times in PatSeqDB
Tools
SEQ ID NO
8
Length
20
Sequence Type
RNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
44 times in PatSeqDB
Tools
SEQ ID NO
9
Length
20
Sequence Type
RNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
44 times in PatSeqDB
Tools
SEQ ID NO
10
Length
20
Sequence Type
RNA
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
44 times in PatSeqDB
Tools

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