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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
8 sequences found in this patent (in total)

Displaying 8 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
5,259
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Rattus norvegicus

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:6980983
      NM_012574
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      5,259 bp
    • E Value
      0E0
    • BLAST Score
      9,712.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_012574
      100% cov
    • Alignment Length
      5,259 bp
    • CIGAR string
      5259M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:117168298
      NM_008171
      1 of 2 hits reported for Mus musculus.
    • Hit length
      7,515 bp
    • E Value
      0E0
    • BLAST Score
      8,451.4 bits
    • Similarity
      95.82%
    • Coverage
      99.41%
    • Alignment (schematic)

      SEQ ID NO 1
      99.41% cov
      NM_008171
      69.71% cov
    • Alignment Length
      5,242 bp
    • CIGAR string
      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 mismatches: 202 - insertions: 14 - deletions: 3
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:225000315
      BC172745
    • Hit length
      4,510 bp
    • E Value
      0E0
    • BLAST Score
      7,304.6 bits
    • Similarity
      96.31%
    • Coverage
      84.56%
    • Alignment (schematic)

      SEQ ID NO 1
      84.56% cov
      BC172745
      98.6% cov
    • Alignment Length
      4,447 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297691271
      XM_002822968
    • Hit length
      6,227 bp
    • E Value
      0E0
    • BLAST Score
      6,597.4 bits
    • Similarity
      90.93%
    • Coverage
      93.34%
    • Alignment (schematic)

      SEQ ID NO 1
      93.34% cov
      XM_002822968
      78.98% cov
    • Alignment Length
      4,929 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332232768
      XM_003265527
    • Hit length
      6,218 bp
    • E Value
      0E0
    • BLAST Score
      6,573.3 bits
    • Similarity
      90.84%
    • Coverage
      93.34%
    • Alignment (schematic)

      SEQ ID NO 1
      93.34% cov
      XM_003265527
      79.03% cov
    • Alignment Length
      4,926 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:1899201
      U90278
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      5,467 bp
    • E Value
      0E0
    • BLAST Score
      6,562.3 bits
    • Similarity
      90.82%
    • Coverage
      93.33%
    • Alignment (schematic)

      SEQ ID NO 1
      93.33% cov
      U90278
      89.83% cov
    • Alignment Length
      4,924 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114643712
      XM_528744
    • Hit length
      6,243 bp
    • E Value
      0E0
    • BLAST Score
      6,547.5 bits
    • Similarity
      90.76%
    • Coverage
      93.29%
    • Alignment (schematic)

      SEQ ID NO 1
      93.29% cov
      XM_528744
      78.71% cov
    • Alignment Length
      4,924 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297261863
      XM_001088140
    • Hit length
      6,240 bp
    • E Value
      0E0
    • BLAST Score
      6,499.5 bits
    • Similarity
      90.58%
    • Coverage
      93.34%
    • Alignment (schematic)

      SEQ ID NO 1
      93.34% cov
      XM_001088140
      78.75% cov
    • Alignment Length
      4,924 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296210915
      XM_002752120
    • Hit length
      5,928 bp
    • E Value
      0E0
    • BLAST Score
      6,412.7 bits
    • Similarity
      90.31%
    • Coverage
      93.34%
    • Alignment (schematic)

      SEQ ID NO 1
      93.34% cov
      XM_002752120
      82.59% cov
    • Alignment Length
      4,923 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194211739
      XM_001501641
    • Hit length
      5,972 bp
    • E Value
      0E0
    • BLAST Score
      6,405.3 bits
    • Similarity
      90.18%
    • Coverage
      93.61%
    • Alignment (schematic)

      SEQ ID NO 1
      93.61% cov
      XM_001501641
      82.43% cov
    • Alignment Length
      4,940 bp
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
1,482
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Rattus norvegicus

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:6980984
      NP_036706
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      1,482 aa
    • E Value
      0E0
    • BLAST Score
      3,104.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_036706
      100% cov
    • Alignment Length
      1,482 aa
    • CIGAR string
      1482M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:117168299
      NP_032197
      1 of 3 hits reported for Mus musculus.
    • Hit length
      1,482 aa
    • E Value
      0E0
    • BLAST Score
      3,093.9 bits
    • Similarity
      99.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_032197
      100% cov
    • Alignment Length
      1,482 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:167003331
      NP_000825
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      1,484 aa
    • E Value
      0E0
    • BLAST Score
      3,038.4 bits
    • Similarity
      99.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_000825
      100% cov
    • Alignment Length
      1,484 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114643713
      XP_528744
    • Hit length
      1,484 aa
    • E Value
      0E0
    • BLAST Score
      3,038.1 bits
    • Similarity
      99.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_528744
      100% cov
    • Alignment Length
      1,484 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109095759
      XP_001088140
    • Hit length
      1,484 aa
    • E Value
      0E0
    • BLAST Score
      3,035.4 bits
    • Similarity
      99.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001088140
      100% cov
    • Alignment Length
      1,484 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194211740
      XP_001501691
    • Hit length
      1,483 aa
    • E Value
      0E0
    • BLAST Score
      3,033 bits
    • Similarity
      99.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001501691
      100% cov
    • Alignment Length
      1,484 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332232769
      XP_003265575
    • Hit length
      1,484 aa
    • E Value
      0E0
    • BLAST Score
      3,031.5 bits
    • Similarity
      99.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003265575
      100% cov
    • Alignment Length
      1,484 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301765198
      XP_002918018
    • Hit length
      1,483 aa
    • E Value
      0E0
    • BLAST Score
      3,018 bits
    • Similarity
      98.85%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002918018
      100% cov
    • Alignment Length
      1,483 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:56790284
      NP_001008719
    • Hit length
      1,485 aa
    • E Value
      0E0
    • BLAST Score
      3,017.6 bits
    • Similarity
      98.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001008719
      100% cov
    • Alignment Length
      1,485 aa
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
3,804
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Rattus rattus

Determined organism:
  • Rattus rattus

    Rattus rattus

    • Public DB hit
      GI:57664
      X67241
    • Hit length
      3,804 bp
    • E Value
      0E0
    • BLAST Score
      7,025.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      X67241
      100% cov
    • Alignment Length
      3,804 bp
    • CIGAR string
      3804M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:281485564
      NM_001170531
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      4,226 bp
    • E Value
      0E0
    • BLAST Score
      7,020.2 bits
    • Similarity
      99.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001170531
      90.01% cov
    • Alignment Length
      3,804 bp
    • CIGAR string
      137MN3666M mismatches: 1 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:89111132
      NM_011245
      1 of 5 hits reported for Mus musculus.
    • Hit length
      4,243 bp
    • E Value
      0E0
    • BLAST Score
      4,992.6 bits
    • Similarity
      90.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_011245
      90.93% cov
    • Alignment Length
      3,878 bp
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:309162
      L20899
    • Hit length
      4,180 bp
    • E Value
      0E0
    • BLAST Score
      4,981.5 bits
    • Similarity
      90.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      L20899
      92.3% cov
    • Alignment Length
      3,878 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224586879
      NM_001145648
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      6,366 bp
    • E Value
      0E0
    • BLAST Score
      3,555.9 bits
    • Similarity
      83.82%
    • Coverage
      99.24%
    • Alignment (schematic)

      SEQ ID NO 3
      99.24% cov
      NM_001145648
      59.9% cov
    • Alignment Length
      3,851 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332844481
      XM_001153395
    • Hit length
      6,345 bp
    • E Value
      0E0
    • BLAST Score
      3,533.8 bits
    • Similarity
      83.72%
    • Coverage
      99.24%
    • Alignment (schematic)

      SEQ ID NO 3
      99.24% cov
      XM_001153395
      60.09% cov
    • Alignment Length
      3,852 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168278139
      AB385192
    • Hit length
      3,788 bp
    • E Value
      0E0
    • BLAST Score
      3,522.7 bits
    • Similarity
      83.85%
    • Coverage
      98.13%
    • Alignment (schematic)

      SEQ ID NO 3
      98.13% cov
      AB385192
      99.58% cov
    • Alignment Length
      3,809 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296213766
      XM_002807181
    • Hit length
      4,292 bp
    • E Value
      0E0
    • BLAST Score
      3,450.7 bits
    • Similarity
      83.33%
    • Coverage
      99.24%
    • Alignment (schematic)

      SEQ ID NO 3
      99.24% cov
      XM_002807181
      88.98% cov
    • Alignment Length
      3,858 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:300794931
      NM_001191457
      1 of 4 hits reported for Bos taurus.
    • Hit length
      3,774 bp
    • E Value
      0E0
    • BLAST Score
      3,360.2 bits
    • Similarity
      83.11%
    • Coverage
      98.19%
    • Alignment (schematic)

      SEQ ID NO 3
      98.19% cov
      NM_001191457
      100% cov
    • Alignment Length
      3,818 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73951706
      XM_545892
    • Hit length
      3,915 bp
    • E Value
      0E0
    • BLAST Score
      3,181.1 bits
    • Similarity
      82.74%
    • Coverage
      95.32%
    • Alignment (schematic)

      SEQ ID NO 3
      95.32% cov
      XM_545892
      93.46% cov
    • Alignment Length
      3,707 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
1,244
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Rattus rattus

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:281485565
      NP_001164002
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      1,244 aa
    • E Value
      0E0
    • BLAST Score
      2,583.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001164002
      100% cov
    • Alignment Length
      1,244 aa
    • CIGAR string
      1244M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6755288
      NP_035375
    • Hit length
      1,262 aa
    • E Value
      0E0
    • BLAST Score
      2,323.5 bits
    • Similarity
      94.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_035375
      100% cov
    • Alignment Length
      1,262 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301775252
      XP_002923046
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,257 aa
    • E Value
      0E0
    • BLAST Score
      2,152.9 bits
    • Similarity
      91.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002923046
      100% cov
    • Alignment Length
      1,258 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:300794932
      NP_001178386
    • Hit length
      1,257 aa
    • E Value
      0E0
    • BLAST Score
      2,152.1 bits
    • Similarity
      91.49%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001178386
      100% cov
    • Alignment Length
      1,258 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296213767
      XP_002807227
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,259 aa
    • E Value
      0E0
    • BLAST Score
      2,150.6 bits
    • Similarity
      90.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002807227
      100% cov
    • Alignment Length
      1,260 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224586880
      NP_001139120
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      1,257 aa
    • E Value
      0E0
    • BLAST Score
      2,150.6 bits
    • Similarity
      91.34%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001139120
      100% cov
    • Alignment Length
      1,258 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332844482
      XP_001153395
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,257 aa
    • E Value
      0E0
    • BLAST Score
      2,149.4 bits
    • Similarity
      91.34%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001153395
      100% cov
    • Alignment Length
      1,258 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334314268
      XP_001368432
    • Hit length
      1,256 aa
    • E Value
      0E0
    • BLAST Score
      2,132.5 bits
    • Similarity
      90.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001368432
      100% cov
    • Alignment Length
      1,257 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73951707
      XP_545892
    • Hit length
      1,304 aa
    • E Value
      0E0
    • BLAST Score
      2,130.9 bits
    • Similarity
      87.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_545892
      100% cov
    • Alignment Length
      1,305 aa
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
6,208
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4099612
      U88963
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      6,208 bp
    • E Value
      0E0
    • BLAST Score
      11,465.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      U88963
      100% cov
    • Alignment Length
      6,208 bp
    • CIGAR string
      6208M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114643712
      XM_528744
    • Hit length
      6,243 bp
    • E Value
      0E0
    • BLAST Score
      11,114.3 bits
    • Similarity
      98.99%
    • Coverage
      99.9%
    • Alignment (schematic)

      SEQ ID NO 5
      99.9% cov
      XM_528744
      99.5% cov
    • Alignment Length
      6,217 bp
    • CIGAR string
      238MN356MN557MN44MN2MN41MN185MN49MN33MN50MN278MN1634MN125MN20MN56MN26MN2MN230MN115MN228MN397MN63MI2M2I14MD24MN65MI2MI35M3I37MN233MIMD193MN30MN109M2N37MN58MN54MN9M2N15MN23MN6MI32MIMD39MN27MIMND59MN17MN18MN60MN100MD4MI27M3N67MI3MI23M6H mismatches: 43 - insertions: 15 - deletions: 5
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297691271
      XM_002822968
    • Hit length
      6,227 bp
    • E Value
      0E0
    • BLAST Score
      10,811.4 bits
    • Similarity
      98.15%
    • Coverage
      99.9%
    • Alignment (schematic)

      SEQ ID NO 5
      99.9% cov
      XM_002822968
      99.5% cov
    • Alignment Length
      6,218 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332232768
      XM_003265527
    • Hit length
      6,218 bp
    • E Value
      0E0
    • BLAST Score
      10,665.5 bits
    • Similarity
      97.75%
    • Coverage
      99.9%
    • Alignment (schematic)

      SEQ ID NO 5
      99.9% cov
      XM_003265527
      99.5% cov
    • Alignment Length
      6,220 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297261863
      XM_001088140
    • Hit length
      6,240 bp
    • E Value
      0E0
    • BLAST Score
      10,589.8 bits
    • Similarity
      97.48%
    • Coverage
      99.9%
    • Alignment (schematic)

      SEQ ID NO 5
      99.9% cov
      XM_001088140
      99.5% cov
    • Alignment Length
      6,220 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296210915
      XM_002752120
    • Hit length
      5,928 bp
    • E Value
      0E0
    • BLAST Score
      9,389.5 bits
    • Similarity
      95.33%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 5
      95.65% cov
      XM_002752120
      99.48% cov
    • Alignment Length
      5,955 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194211739
      XM_001501641
    • Hit length
      5,972 bp
    • E Value
      0E0
    • BLAST Score
      8,067.3 bits
    • Similarity
      91.19%
    • Coverage
      96.34%
    • Alignment (schematic)

      SEQ ID NO 5
      96.34% cov
      XM_001501641
      99.48% cov
    • Alignment Length
      6,028 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:56790283
      NM_001008719
    • Hit length
      4,458 bp
    • E Value
      0E0
    • BLAST Score
      6,734 bits
    • Similarity
      93.95%
    • Coverage
      71.76%
    • Alignment (schematic)

      SEQ ID NO 5
      71.76% cov
      NM_001008719
      100% cov
    • Alignment Length
      4,465 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301765197
      XM_002917972
    • Hit length
      4,452 bp
    • E Value
      0E0
    • BLAST Score
      6,722.9 bits
    • Similarity
      93.93%
    • Coverage
      71.76%
    • Alignment (schematic)

      SEQ ID NO 5
      71.76% cov
      XM_002917972
      100% cov
    • Alignment Length
      4,464 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335288427
      XM_003355567
    • Hit length
      4,751 bp
    • E Value
      0E0
    • BLAST Score
      6,556.7 bits
    • Similarity
      91.96%
    • Coverage
      75.4%
    • Alignment (schematic)

      SEQ ID NO 5
      75.4% cov
      XM_003355567
      98.53% cov
    • Alignment Length
      4,690 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
1,484
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4099613
      AAD00659
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      1,484 aa
    • E Value
      0E0
    • BLAST Score
      3,113.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAD00659
      100% cov
    • Alignment Length
      1,484 aa
    • CIGAR string
      1484M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114643713
      XP_528744
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,484 aa
    • E Value
      0E0
    • BLAST Score
      3,109.3 bits
    • Similarity
      99.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_528744
      100% cov
    • Alignment Length
      1,484 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109095759
      XP_001088140
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,484 aa
    • E Value
      0E0
    • BLAST Score
      3,109.3 bits
    • Similarity
      99.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001088140
      100% cov
    • Alignment Length
      1,484 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332232769
      XP_003265575
    • Hit length
      1,484 aa
    • E Value
      0E0
    • BLAST Score
      3,103.2 bits
    • Similarity
      99.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003265575
      100% cov
    • Alignment Length
      1,484 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194211740
      XP_001501691
    • Hit length
      1,483 aa
    • E Value
      0E0
    • BLAST Score
      3,052.3 bits
    • Similarity
      99.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001501691
      100% cov
    • Alignment Length
      1,484 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:149049163
      EDM01617
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      1,482 aa
    • E Value
      0E0
    • BLAST Score
      3,037.7 bits
    • Similarity
      99.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EDM01617
      100% cov
    • Alignment Length
      1,484 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296210916
      XP_002752166
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,482 aa
    • E Value
      0E0
    • BLAST Score
      3,035.7 bits
    • Similarity
      99.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002752166
      100% cov
    • Alignment Length
      1,485 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301765198
      XP_002918018
    • Hit length
      1,483 aa
    • E Value
      0E0
    • BLAST Score
      3,035.4 bits
    • Similarity
      98.99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002918018
      100% cov
    • Alignment Length
      1,484 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:56790284
      NP_001008719
    • Hit length
      1,485 aa
    • E Value
      0E0
    • BLAST Score
      3,033.8 bits
    • Similarity
      98.99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001008719
      100% cov
    • Alignment Length
      1,485 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:117168299
      NP_032197
    • Hit length
      1,482 aa
    • E Value
      0E0
    • BLAST Score
      3,033.4 bits
    • Similarity
      99.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_032197
      100% cov
    • Alignment Length
      1,484 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
4,022
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224586878
      NM_002891
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      6,414 bp
    • E Value
      0E0
    • BLAST Score
      7,428.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_002891
      62.71% cov
    • Alignment Length
      4,022 bp
    • CIGAR string
      4022M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332844480
      XM_001153586
    • Hit length
      6,393 bp
    • E Value
      0E0
    • BLAST Score
      7,350.8 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_001153586
      62.91% cov
    • Alignment Length
      4,022 bp
    • CIGAR string
      455MN78MN361MN730MN54MN611MN74MN110MN127MN21MN101MN566MN495MN31MN194M mismatches: 14 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332252674
      XM_003275431
    • Hit length
      4,627 bp
    • E Value
      0E0
    • BLAST Score
      4,590 bits
    • Similarity
      98.25%
    • Coverage
      65.22%
    • Alignment (schematic)

      SEQ ID NO 7
      65.22% cov
      XM_003275431
      56.69% cov
    • Alignment Length
      2,623 bp
    • CIGAR string
      317MN77MN17MN11MN29MN50MN27MN54M2N14MN56MN41MN80MN11MN47MN137MN83MN203MN16MN10MN7M2N40M3N15MN8MN14MN74MN11MN54MN280MN53MN233MN2MN59MN5MN53MN23MN2MN41MN74MN11MN129MN18MN77MN14M1399H mismatches: 46 - insertions: 0 - deletions: 0
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
1,273
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:24797099
      NP_002882
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      1,273 aa
    • E Value
      0E0
    • BLAST Score
      2,649.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_002882
      100% cov
    • Alignment Length
      1,273 aa
    • CIGAR string
      1273M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114658426
      XP_001153586
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,273 aa
    • E Value
      0E0
    • BLAST Score
      2,644.8 bits
    • Similarity
      99.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001153586
      100% cov
    • Alignment Length
      1,273 aa
    • CIGAR string
      178MN363MN326MN403M mismatches: 3 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296213767
      XP_002807227
    • Hit length
      1,259 aa
    • E Value
      0E0
    • BLAST Score
      2,526.9 bits
    • Similarity
      98.27%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002807227
      100% cov
    • Alignment Length
      1,275 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281350251
      EFB25835
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,267 aa
    • E Value
      0E0
    • BLAST Score
      2,515.7 bits
    • Similarity
      97.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EFB25835
      100% cov
    • Alignment Length
      1,273 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:300794932
      NP_001178386
    • Hit length
      1,257 aa
    • E Value
      0E0
    • BLAST Score
      2,508.4 bits
    • Similarity
      97.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001178386
      100% cov
    • Alignment Length
      1,273 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73951707
      XP_545892
    • Hit length
      1,304 aa
    • E Value
      0E0
    • BLAST Score
      2,479.1 bits
    • Similarity
      93.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_545892
      100% cov
    • Alignment Length
      1,322 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332252675
      XP_003275479
    • Hit length
      1,270 aa
    • E Value
      0E0
    • BLAST Score
      2,468 bits
    • Similarity
      95.61%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003275479
      100% cov
    • Alignment Length
      1,276 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334314268
      XP_001368432
      1 of 2 hits reported for Monodelphis domestica.
    • Hit length
      1,256 aa
    • E Value
      0E0
    • BLAST Score
      2,454.5 bits
    • Similarity
      96.23%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001368432
      100% cov
    • Alignment Length
      1,273 aa
Occurrence
44 times in PatSeqDB
Tools
PatSeq Finder

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