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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
29 sequences found in this patent (in total)

Displaying 1 - 10 of 29 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,643
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21707886
      BC034148
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      1,643 bp
    • E Value
      0E0
    • BLAST Score
      3,035.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BC034148
      100% cov
    • Alignment Length
      1,643 bp
    • CIGAR string
      1643M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097929
      NM_001132255
    • Hit length
      1,658 bp
    • E Value
      0E0
    • BLAST Score
      2,941 bits
    • Similarity
      99.27%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 1
      98.9% cov
      NM_001132255
      98.43% cov
    • Alignment Length
      1,633 bp
    • CIGAR string
      620MN338M3I5MI8M3I4MI40MN20MN574MD12M18H mismatches: 3 - insertions: 8 - deletions: 1
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:50978645
      NM_001003019
    • Hit length
      1,630 bp
    • E Value
      0E0
    • BLAST Score
      2,845 bits
    • Similarity
      98.46%
    • Coverage
      98.11%
    • Alignment (schematic)

      SEQ ID NO 1
      98.11% cov
      NM_001003019
      99.33% cov
    • Alignment Length
      1,621 bp
    • CIGAR string
      151MN8MN5MN14MN74MN5MN8MN8MN5MN2MN5MN418MD256MI2MI7MI10M3I47MN78MN88MD263MN34MI8MI60MI40M31H mismatches: 14 - insertions: 9 - deletions: 2
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114670698
      XM_001156931
    • Hit length
      2,636 bp
    • E Value
      0E0
    • BLAST Score
      2,793.3 bits
    • Similarity
      97.79%
    • Coverage
      98.11%
    • Alignment (schematic)

      SEQ ID NO 1
      98.11% cov
      XM_001156931
      61.8% cov
    • Alignment Length
      1,630 bp
    • CIGAR string
      440MN127MN46M2N72MN44MN49MN29MN4MN28MN8MN113MI3MI2MIMIMI8MI4M9I28MI2M2I285MN92MN84MN39MN15MN13MN29MD28M31H mismatches: 17 - insertions: 18 - deletions: 1
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:67969106
      AB168802
    • Hit length
      1,622 bp
    • E Value
      0E0
    • BLAST Score
      2,435 bits
    • Similarity
      93.75%
    • Coverage
      99.39%
    • Alignment (schematic)

      SEQ ID NO 1
      99.39% cov
      AB168802
      100% cov
    • Alignment Length
      1,647 bp
    • CIGAR string
      58MN189MNMN35MN50MN89MN12MN24MN3MN2MN10MN23MN49MN12MN3MN10M3I4MN4MD2MI8MN5MN4MND38MN21MN8MN4MN11MNMNMN8M3D10MDMN2MNI10MN18MN14MN6MN15M2N9MNMN57M2I46MN5MN9MN7MDMI9MN2MN7MD2MDMD6M12D28MI2M3I15MN2MN15MN5MN2MN110MIMND43MN36MN2MN14MN10MN18MN33MN41MN35MN2MN30MI2MD29MN14MN21MN30MN31MD28MNM2N17M10H mismatches: 64 - insertions: 14 - deletions: 25
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297273741
      XM_001108164
    • Hit length
      1,912 bp
    • E Value
      0E0
    • BLAST Score
      2,429.5 bits
    • Similarity
      93.98%
    • Coverage
      98.11%
    • Alignment (schematic)

      SEQ ID NO 1
      98.11% cov
      XM_001108164
      84.05% cov
    • Alignment Length
      1,629 bp
    • CIGAR string
      58MN191MN35MN50MN89MN12MN24MN3MN13MN23MN49MN12MN3MN10M3I4MN4MD2MI8MN5MN4MND38MN21MN8MN4MN15MN6M3N3I12MDMN2MI11MN18MN14MN6MN15M2N9MNMN57M2I46MN5MN9MN7MDMI9MN2MN7MD2MDMD6M12D28MI2M3I15MN2MN15MN5MN2MN110MIMND80MN2MN14MN10MN18MN23MN9MN41MN35MN2MN30MI2MD29MN14MN21MN30MN31MD28M31H mismatches: 59 - insertions: 17 - deletions: 22
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
142
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097930
      NP_001125727
    • Hit length
      142 aa
    • E Value
      3.42E-77
    • BLAST Score
      291.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001125727
      100% cov
    • Alignment Length
      142 aa
    • CIGAR string
      142M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:159795430
      2RAW_A
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      145 aa
    • E Value
      3.65E-77
    • BLAST Score
      291.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      2RAW_A
      97.93% cov
    • Alignment Length
      142 aa
    • CIGAR string
      142M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:60652847
      AAX29118
      1 of 2 hits reported for synthetic construct.
    • Hit length
      143 aa
    • E Value
      3.84E-77
    • BLAST Score
      291.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAX29118
      99.3% cov
    • Alignment Length
      142 aa
    • CIGAR string
      142M mismatches: 0 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:50978646
      NP_001003019
    • Hit length
      142 aa
    • E Value
      7.74E-77
    • BLAST Score
      290.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001003019
      100% cov
    • Alignment Length
      142 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296203315
      XP_002748841
    • Hit length
      142 aa
    • E Value
      5.15E-76
    • BLAST Score
      287.7 bits
    • Similarity
      99.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002748841
      100% cov
    • Alignment Length
      142 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114670699
      XP_001156931
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      142 aa
    • E Value
      5.64E-76
    • BLAST Score
      287.7 bits
    • Similarity
      99.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001156931
      100% cov
    • Alignment Length
      142 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109118487
      XP_001108164
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      142 aa
    • E Value
      2.51E-75
    • BLAST Score
      285.4 bits
    • Similarity
      98.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001108164
      100% cov
    • Alignment Length
      142 aa
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:67969107
      BAE00908
    • Hit length
      237 aa
    • E Value
      7.68E-75
    • BLAST Score
      283.9 bits
    • Similarity
      97.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAE00908
      59.92% cov
    • Alignment Length
      142 aa
Occurrence
535 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
955
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:3135206
      AB013819
      1 of 6 hits reported for Mus musculus.
    • Hit length
      955 bp
    • E Value
      0E0
    • BLAST Score
      1,764.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB013819
      100% cov
    • Alignment Length
      955 bp
    • CIGAR string
      955M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:11560096
      NM_022274
    • Hit length
      903 bp
    • E Value
      0E0
    • BLAST Score
      732.4 bits
    • Similarity
      82.61%
    • Coverage
      88.59%
    • Alignment (schematic)

      SEQ ID NO 3
      88.59% cov
      NM_022274
      97.79% cov
    • Alignment Length
      897 bp
    • CIGAR string
      105H8MN3MN12MN10MN7MN3MN2MN4MN3M2N30MN3MN16MN38MN39MN16MN11MN14MN26MN2MN12MN10MN8MN2MN2MN13MN3MN38MN2MN8MN2MN5MNDM2N2MI2M3N3MN5MN19MNMN15MNMND3MN21M2N9M3N10MD4MI2MNM3I4MN3MNM2NM2D5MN2M2DMD4MN3M2N4MN9M2N3MN2MI4M2N15M4IM2IM3I2MIM4I37MN12MNMN6MN2MI2MIM2I8MDMI13MN2MN4MI2M2NI4M2I2M2N7IMI8MN3M2DMD3MNMIMD4MN7MNM2N3MN3MNDMI10MN3MN4MI4MI4MN17MI2M5I5M3I7M2N8MN7MN10MN4MNMI4M4H mismatches: 91 - insertions: 51 - deletions: 14
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
140
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6753090
      NP_033819
    • Hit length
      140 aa
    • E Value
      4.01E-77
    • BLAST Score
      291.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_033819
      100% cov
    • Alignment Length
      140 aa
    • CIGAR string
      140M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:149054924
      EDM06741
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      142 aa
    • E Value
      2.33E-72
    • BLAST Score
      275.8 bits
    • Similarity
      97.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EDM06741
      98.59% cov
    • Alignment Length
      140 aa
    • CIGAR string
      7M2N6M2N2MN11MN60MN12MN22MNMN9M mismatches: 10 - insertions: 0 - deletions: 0
  • Cricetulus griseus

    Cricetulus griseus

    • Public DB hit
      GI:116293727
      ABJ98055
    • Hit length
      140 aa
    • E Value
      2.38E-66
    • BLAST Score
      255.8 bits
    • Similarity
      93.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ABJ98055
      100% cov
    • Alignment Length
      140 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194216590
      XP_001915435
    • Hit length
      142 aa
    • E Value
      2.95E-66
    • BLAST Score
      255.4 bits
    • Similarity
      93.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001915435
      98.59% cov
    • Alignment Length
      140 aa
  • Cavia porcellus

    Cavia porcellus

    • Public DB hit
      GI:314122367
      NP_001186646
    • Hit length
      142 aa
    • E Value
      1.08E-65
    • BLAST Score
      253.4 bits
    • Similarity
      93.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001186646
      98.59% cov
    • Alignment Length
      140 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:50979204
      NP_001003348
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      142 aa
    • E Value
      1.65E-65
    • BLAST Score
      252.7 bits
    • Similarity
      93.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001003348
      98.59% cov
    • Alignment Length
      140 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:47523080
      NP_999306
    • Hit length
      142 aa
    • E Value
      1.93E-65
    • BLAST Score
      252.7 bits
    • Similarity
      92.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_999306
      98.59% cov
    • Alignment Length
      140 aa
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57163813
      NP_001009280
    • Hit length
      142 aa
    • E Value
      2.44E-65
    • BLAST Score
      252.3 bits
    • Similarity
      93.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001009280
      98.59% cov
    • Alignment Length
      140 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301766020
      XP_002918421
    • Hit length
      142 aa
    • E Value
      3.1E-65
    • BLAST Score
      251.9 bits
    • Similarity
      92.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002918421
      98.59% cov
    • Alignment Length
      140 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:159795430
      2RAW_A
    • Hit length
      145 aa
    • E Value
      3.52E-65
    • BLAST Score
      251.9 bits
    • Similarity
      92.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      2RAW_A
      96.55% cov
    • Alignment Length
      140 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:60652847
      AAX29118
    • Hit length
      143 aa
    • E Value
      4.87E-65
    • BLAST Score
      251.1 bits
    • Similarity
      92.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAX29118
      97.9% cov
    • Alignment Length
      140 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097930
      NP_001125727
    • Hit length
      142 aa
    • E Value
      5.29E-65
    • BLAST Score
      251.1 bits
    • Similarity
      92.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001125727
      98.59% cov
    • Alignment Length
      140 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:47681470
      AAT37504
    • Hit length
      142 aa
    • E Value
      5.38E-65
    • BLAST Score
      251.1 bits
    • Similarity
      92.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAT37504
      98.59% cov
    • Alignment Length
      140 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296203315
      XP_002748841
    • Hit length
      142 aa
    • E Value
      5.43E-65
    • BLAST Score
      251.1 bits
    • Similarity
      92.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002748841
      98.59% cov
    • Alignment Length
      140 aa
Occurrence
50 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
852
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2335034
      AB002409
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      852 bp
    • E Value
      0E0
    • BLAST Score
      1,574.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB002409
      100% cov
    • Alignment Length
      852 bp
    • CIGAR string
      852M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332831809
      XM_001164162
    • Hit length
      923 bp
    • E Value
      0E0
    • BLAST Score
      1,548.6 bits
    • Similarity
      99.53%
    • Coverage
      99.77%
    • Alignment (schematic)

      SEQ ID NO 5
      99.77% cov
      XM_001164162
      92.09% cov
    • Alignment Length
      850 bp
    • CIGAR string
      21MN486M2N225MN114M2H mismatches: 4 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332228510
      XM_003263384
    • Hit length
      889 bp
    • E Value
      0E0
    • BLAST Score
      1,482.1 bits
    • Similarity
      98.12%
    • Coverage
      99.77%
    • Alignment (schematic)

      SEQ ID NO 5
      99.77% cov
      XM_003263384
      95.61% cov
    • Alignment Length
      850 bp
    • CIGAR string
      115MN3MN72MN21MN64MN53MN5MN62MN83MN21M2N138MN21MN10MN53MN44MN69M2H mismatches: 16 - insertions: 0 - deletions: 0
Occurrence
54 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
134
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4506835
      NP_002980
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      134 aa
    • E Value
      3.23E-70
    • BLAST Score
      268.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_002980
      100% cov
    • Alignment Length
      134 aa
    • CIGAR string
      134M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332228511
      XP_003263432
    • Hit length
      134 aa
    • E Value
      2.2E-51
    • BLAST Score
      206.1 bits
    • Similarity
      97.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003263432
      100% cov
    • Alignment Length
      134 aa
    • CIGAR string
      19M2N31MN81M mismatches: 3 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136271
      NP_001028027
    • Hit length
      131 aa
    • E Value
      3.97E-49
    • BLAST Score
      198.4 bits
    • Similarity
      93.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001028027
      100% cov
    • Alignment Length
      134 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296190190
      XP_002743088
    • Hit length
      134 aa
    • E Value
      1.7E-46
    • BLAST Score
      189.5 bits
    • Similarity
      94.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002743088
      100% cov
    • Alignment Length
      134 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:52546718
      NP_001005258
    • Hit length
      137 aa
    • E Value
      1.2E-42
    • BLAST Score
      176.8 bits
    • Similarity
      86.47%
    • Coverage
      99.25%
    • Alignment (schematic)

      SEQ ID NO 6
      99.25% cov
      NP_001005258
      97.08% cov
    • Alignment Length
      133 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301791195
      XP_002930570
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      137 aa
    • E Value
      1.57E-40
    • BLAST Score
      169.9 bits
    • Similarity
      88.72%
    • Coverage
      99.25%
    • Alignment (schematic)

      SEQ ID NO 6
      99.25% cov
      XP_002930570
      97.08% cov
    • Alignment Length
      133 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:57282611
      CAE51187
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      134 aa
    • E Value
      1.48E-38
    • BLAST Score
      163.3 bits
    • Similarity
      84.85%
    • Coverage
      98.51%
    • Alignment (schematic)

      SEQ ID NO 6
      98.51% cov
      CAE51187
      96.27% cov
    • Alignment Length
      132 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:56606078
      NP_001008513
    • Hit length
      133 aa
    • E Value
      1.76E-38
    • BLAST Score
      162.9 bits
    • Similarity
      82.31%
    • Coverage
      97.01%
    • Alignment (schematic)

      SEQ ID NO 6
      97.01% cov
      NP_001008513
      96.24% cov
    • Alignment Length
      130 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291383045
      XP_002708059
    • Hit length
      131 aa
    • E Value
      4.19E-36
    • BLAST Score
      155.2 bits
    • Similarity
      83.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002708059
      100% cov
    • Alignment Length
      134 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149758043
      XP_001497278
      1 of 2 hits reported for Equus caballus.
    • Hit length
      131 aa
    • E Value
      7.84E-36
    • BLAST Score
      154.1 bits
    • Similarity
      88.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001497278
      100% cov
    • Alignment Length
      134 aa
Occurrence
590 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
615
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Mus musculus

Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
133
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:14547891
      NP_035254
      1 of 3 hits reported for Mus musculus.
    • Hit length
      133 aa
    • E Value
      1.53E-70
    • BLAST Score
      269.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_035254
      100% cov
    • Alignment Length
      133 aa
    • CIGAR string
      133M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:56606078
      NP_001008513
    • Hit length
      133 aa
    • E Value
      7.83E-53
    • BLAST Score
      210.7 bits
    • Similarity
      91.67%
    • Coverage
      99.25%
    • Alignment (schematic)

      SEQ ID NO 8
      99.25% cov
      NP_001008513
      97.74% cov
    • Alignment Length
      132 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:52546718
      NP_001005258
    • Hit length
      137 aa
    • E Value
      1.08E-39
    • BLAST Score
      167.2 bits
    • Similarity
      81.95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001005258
      97.08% cov
    • Alignment Length
      133 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301791195
      XP_002930570
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      137 aa
    • E Value
      5.32E-38
    • BLAST Score
      161.4 bits
    • Similarity
      84.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002930570
      97.08% cov
    • Alignment Length
      133 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:57282611
      CAE51187
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      134 aa
    • E Value
      1.44E-36
    • BLAST Score
      156.8 bits
    • Similarity
      82.54%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 8
      94.74% cov
      CAE51187
      94.03% cov
    • Alignment Length
      126 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291383045
      XP_002708059
    • Hit length
      131 aa
    • E Value
      4.86E-34
    • BLAST Score
      148.3 bits
    • Similarity
      81.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002708059
      99.24% cov
    • Alignment Length
      133 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4506835
      NP_002980
    • Hit length
      134 aa
    • E Value
      2.51E-33
    • BLAST Score
      146 bits
    • Similarity
      81.95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_002980
      99.25% cov
    • Alignment Length
      133 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149758043
      XP_001497278
      1 of 2 hits reported for Equus caballus.
    • Hit length
      131 aa
    • E Value
      6.14E-32
    • BLAST Score
      141.4 bits
    • Similarity
      81.55%
    • Coverage
      77.44%
    • Alignment (schematic)

      SEQ ID NO 8
      77.44% cov
      XP_001497278
      78.63% cov
    • Alignment Length
      103 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332228511
      XP_003263432
    • Hit length
      134 aa
    • E Value
      6.35E-32
    • BLAST Score
      141.4 bits
    • Similarity
      80.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003263432
      99.25% cov
    • Alignment Length
      133 aa
Occurrence
50 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
746
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Mus musculus

Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
244
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Mus musculus

Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder

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