Polynucleotides Encoding A Transcriptional Response Regulator Of Streptococcus Pneumoniae

  • Published: Jun 30, 1998
  • Earliest Priority: May 01 1996
  • Family: 2
  • Cited Works: 22
  • Cited by: 4
  • Cites: 3
  • Sequences: 6
  • Additional Info: Cited Works Full text
Data obtained from: EMBL-EBI Pat USPTO Fulltext NCBI GenBank DDBJ Pat
6 sequences found in this patent (in total)

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Download sequences in fasta format: 2 peptides 4 DNAs

Displaying 6 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
1,060
Sequence Type
DNA
Locations
Claims, Detailed Description, Summary
Declared organism
Not specified
Determined organism
  • Streptococcus pneumoniae OXC141

    Streptococcus pneumoniae OXC141

    • Public DB hit
      GI:301799149
      FQ312027
    • Hit length
      2,036,867 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      FQ312027
      0.05% cov
    • Alignment Length
      1,053 bp
    • CIGAR string
      4H125MN789MN137M3H mismatches: 2 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae SPN034156

    Streptococcus pneumoniae SPN034156

    • Public DB hit
      GI:301795364
      FQ312045
    • Hit length
      2,024,476 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      FQ312045
      0.05% cov
    • Alignment Length
      1,053 bp
    • CIGAR string
      4H125MN789MN137M3H mismatches: 2 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae SPN994039

    Streptococcus pneumoniae SPN994039

    • Public DB hit
      GI:301795363
      FQ312044
    • Hit length
      2,025,562 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      FQ312044
      0.05% cov
    • Alignment Length
      1,053 bp
    • CIGAR string
      4H125MN789MN137M3H mismatches: 2 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae SPN034183

    Streptococcus pneumoniae SPN034183

    • Public DB hit
      GI:301795362
      FQ312043
    • Hit length
      2,037,254 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      FQ312043
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae SPN033038

    Streptococcus pneumoniae SPN033038

    • Public DB hit
      GI:301795361
      FQ312042
    • Hit length
      2,133,496 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      FQ312042
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae SPN994038

    Streptococcus pneumoniae SPN994038

    • Public DB hit
      GI:301795360
      FQ312041
    • Hit length
      2,027,108 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      FQ312041
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae SPN032672

    Streptococcus pneumoniae SPN032672

    • Public DB hit
      GI:301795359
      FQ312039
    • Hit length
      2,131,190 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      FQ312039
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae INV104

    Streptococcus pneumoniae INV104

    • Public DB hit
      GI:301793325
      FQ312030
    • Hit length
      2,142,122 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      FQ312030
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae TCH8431/19A

    Streptococcus pneumoniae TCH8431/19A

    • Public DB hit
      GI:298237097
      CP001993
    • Hit length
      2,088,772 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP001993
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae Taiwan19F-14

    Streptococcus pneumoniae Taiwan19F-14

    • Public DB hit
      GI:225726369
      CP000921
    • Hit length
      2,112,148 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP000921
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae JJA

    Streptococcus pneumoniae JJA

    • Public DB hit
      GI:225722171
      CP000919
    • Hit length
      2,120,234 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP000919
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae Hungary19A-6

    Streptococcus pneumoniae Hungary19A-6

    • Public DB hit
      GI:168994879
      CP000936
    • Hit length
      2,245,615 bp
    • E Value
      0E0
    • BLAST Score
      1,934.6 bits
    • Similarity
      99.81%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP000936
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae INV200

    Streptococcus pneumoniae INV200

    • Public DB hit
      GI:301800973
      FQ312029
    • Hit length
      2,093,317 bp
    • E Value
      0E0
    • BLAST Score
      1,929 bits
    • Similarity
      99.72%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      FQ312029
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae CGSP14

    Streptococcus pneumoniae CGSP14

    • Public DB hit
      GI:182628304
      CP001033
    • Hit length
      2,209,198 bp
    • E Value
      0E0
    • BLAST Score
      1,929 bits
    • Similarity
      99.72%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP001033
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae 670-6B

    Streptococcus pneumoniae 670-6B

    • Public DB hit
      GI:306483213
      CP002176
    • Hit length
      2,240,045 bp
    • E Value
      0E0
    • BLAST Score
      1,923.5 bits
    • Similarity
      99.62%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP002176
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae AP200

    Streptococcus pneumoniae AP200

    • Public DB hit
      GI:306408173
      CP002121
    • Hit length
      2,130,580 bp
    • E Value
      0E0
    • BLAST Score
      1,923.5 bits
    • Similarity
      99.62%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP002121
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae P1031

    Streptococcus pneumoniae P1031

    • Public DB hit
      GI:225724295
      CP000920
    • Hit length
      2,111,882 bp
    • E Value
      0E0
    • BLAST Score
      1,923.5 bits
    • Similarity
      99.62%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP000920
      0.05% cov
    • Alignment Length
      1,054 bp
  • Streptococcus pneumoniae 70585

    Streptococcus pneumoniae 70585

    • Public DB hit
      GI:225719968
      CP000918
    • Hit length
      2,184,682 bp
    • E Value
      0E0
    • BLAST Score
      1,923.5 bits
    • Similarity
      99.62%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP000918
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae R6

    Streptococcus pneumoniae R6

    • Public DB hit
      GI:25307955
      AE007317
    • Hit length
      2,038,615 bp
    • E Value
      0E0
    • BLAST Score
      1,923.5 bits
    • Similarity
      99.62%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      AE007317
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae ATCC 700669

    Streptococcus pneumoniae ATCC 700669

    • Public DB hit
      GI:220673408
      FM211187
    • Hit length
      2,221,315 bp
    • E Value
      0E0
    • BLAST Score
      1,923.5 bits
    • Similarity
      99.62%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      FM211187
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae G54

    Streptococcus pneumoniae G54

    • Public DB hit
      GI:194356312
      CP001015
    • Hit length
      2,078,953 bp
    • E Value
      0E0
    • BLAST Score
      1,923.5 bits
    • Similarity
      99.62%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP001015
      0.05% cov
    • Alignment Length
      1,054 bp
  • Streptococcus pneumoniae D39

    Streptococcus pneumoniae D39

    • Public DB hit
      GI:116075884
      CP000410
    • Hit length
      2,046,115 bp
    • E Value
      0E0
    • BLAST Score
      1,923.5 bits
    • Similarity
      99.62%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      CP000410
      0.05% cov
    • Alignment Length
      1,053 bp
  • Streptococcus pneumoniae

    Streptococcus pneumoniae

    • Public DB hit
      GI:14193093
      AF219111
      1 of 2 hits reported for Streptococcus pneumoniae.
    • Hit length
      3,087 bp
    • E Value
      0E0
    • BLAST Score
      1,919.8 bits
    • Similarity
      99.53%
    • Coverage
      99.43%
    • Alignment (schematic)

      SEQ ID NO 1
      99.43% cov
      AF219111
      34.18% cov
    • Alignment Length
      1,055 bp
  • Streptococcus pneumoniae TIGR4

    Streptococcus pneumoniae TIGR4

    • Public DB hit
      GI:193804931
      AE005672
    • Hit length
      2,160,842 bp
    • E Value
      0E0
    • BLAST Score
      1,912.4 bits
    • Similarity
      99.43%
    • Coverage
      99.34%
    • Alignment (schematic)

      SEQ ID NO 1
      99.34% cov
      AE005672
      0.05% cov
    • Alignment Length
      1,054 bp
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
2
Length
234
Sequence Type
peptide
Locations
Claims, Detailed Description, Summary
Declared organism
Not specified
Determined organism
  • Streptococcus pneumoniae TIGR4

    Streptococcus pneumoniae TIGR4

    • Public DB hit
      GI:15901089
      NP_345693
    • Hit length
      234 aa
    • E Value
      1.63E-131
    • BLAST Score
      473.4 bits
    • Similarity
      99.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_345693
      100% cov
    • Alignment Length
      234 aa
    • CIGAR string
      MN232M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae R6

    Streptococcus pneumoniae R6

    • Public DB hit
      GI:15903150
      NP_358700
    • Hit length
      251 aa
    • E Value
      1.91E-131
    • BLAST Score
      473 bits
    • Similarity
      99.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_358700
      93.23% cov
    • Alignment Length
      234 aa
    • CIGAR string
      MN232M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae GA17545

    Streptococcus pneumoniae GA17545

    • Public DB hit
      GI:332074558
      EGI85032
    • Hit length
      234 aa
    • E Value
      6.31E-131
    • BLAST Score
      471.5 bits
    • Similarity
      99.15%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      EGI85032
      100% cov
    • Alignment Length
      234 aa
    • CIGAR string
      MN31MN200M mismatches: 2 - insertions: 0 - deletions: 0
  • Streptococcus sp. M334

    Streptococcus sp. M334

    • Public DB hit
      GI:322376761
      ZP_08051254
    • Hit length
      234 aa
    • E Value
      5.91E-127
    • BLAST Score
      458 bits
    • Similarity
      98.28%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 2
      99.57% cov
      ZP_08051254
      99.57% cov
    • Alignment Length
      233 aa
  • Streptococcus mitis NCTC 12261

    Streptococcus mitis NCTC 12261

    • Public DB hit
      GI:307708758
      ZP_07645220
    • Hit length
      235 aa
    • E Value
      3.47E-122
    • BLAST Score
      442.2 bits
    • Similarity
      96.15%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 2
      99.57% cov
      ZP_07645220
      99.57% cov
    • Alignment Length
      234 aa
  • Streptococcus mitis SK597

    Streptococcus mitis SK597

    • Public DB hit
      GI:307704960
      ZP_07641848
    • Hit length
      235 aa
    • E Value
      3.53E-122
    • BLAST Score
      442.2 bits
    • Similarity
      96.15%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 2
      99.57% cov
      ZP_07641848
      99.57% cov
    • Alignment Length
      234 aa
  • Streptococcus mitis SK321

    Streptococcus mitis SK321

    • Public DB hit
      GI:307706668
      ZP_07643474
    • Hit length
      235 aa
    • E Value
      9.68E-122
    • BLAST Score
      440.7 bits
    • Similarity
      96.15%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 2
      99.57% cov
      ZP_07643474
      99.57% cov
    • Alignment Length
      234 aa
  • Streptococcus mitis B6

    Streptococcus mitis B6

    • Public DB hit
      GI:289168019
      YP_003446288
    • Hit length
      235 aa
    • E Value
      2.12E-121
    • BLAST Score
      439.9 bits
    • Similarity
      95.73%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 2
      99.57% cov
      YP_003446288
      99.57% cov
    • Alignment Length
      234 aa
  • Streptococcus peroris ATCC 700780

    Streptococcus peroris ATCC 700780

    • Public DB hit
      GI:322391842
      ZP_08065307
    • Hit length
      234 aa
    • E Value
      1.35E-120
    • BLAST Score
      437.2 bits
    • Similarity
      96.14%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 2
      99.57% cov
      ZP_08065307
      99.57% cov
    • Alignment Length
      233 aa
  • Streptococcus pneumoniae GA04375

    Streptococcus pneumoniae GA04375

    • Public DB hit
      GI:327389463
      EGE87808
    • Hit length
      214 aa
    • E Value
      1.41E-120
    • BLAST Score
      436.8 bits
    • Similarity
      100%
    • Coverage
      91.45%
    • Alignment (schematic)

      SEQ ID NO 2
      91.45% cov
      EGE87808
      100% cov
    • Alignment Length
      214 aa
  • Streptococcus sp. M143

    Streptococcus sp. M143

    • Public DB hit
      GI:270292778
      ZP_06198989
    • Hit length
      235 aa
    • E Value
      1.45E-120
    • BLAST Score
      436.8 bits
    • Similarity
      94.87%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 2
      99.57% cov
      ZP_06198989
      99.57% cov
    • Alignment Length
      234 aa
  • Streptococcus mitis ATCC 6249

    Streptococcus mitis ATCC 6249

    • Public DB hit
      GI:306829564
      ZP_07462754
    • Hit length
      252 aa
    • E Value
      2.35E-120
    • BLAST Score
      436.4 bits
    • Similarity
      95.3%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 2
      99.57% cov
      ZP_07462754
      92.86% cov
    • Alignment Length
      234 aa
  • Streptococcus sp. oral taxon 071 str. 73H25AP

    Streptococcus sp. oral taxon 071 str. 73H25AP

    • Public DB hit
      GI:306825161
      ZP_07458503
    • Hit length
      235 aa
    • E Value
      5.45E-120
    • BLAST Score
      434.9 bits
    • Similarity
      94.87%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 2
      99.57% cov
      ZP_07458503
      99.57% cov
    • Alignment Length
      234 aa
  • Streptococcus sp. C300

    Streptococcus sp. C300

    • Public DB hit
      GI:322375301
      ZP_08049814
    • Hit length
      235 aa
    • E Value
      5.82E-120
    • BLAST Score
      434.9 bits
    • Similarity
      94.87%
    • Coverage
      99.57%
    • Alignment (schematic)

      SEQ ID NO 2
      99.57% cov
      ZP_08049814
      99.57% cov
    • Alignment Length
      234 aa
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
3
Length
533
Sequence Type
DNA
Locations
Claims, Detailed Description, Summary
Declared organism
Not specified
Determined organism
  • Streptococcus pneumoniae OXC141

    Streptococcus pneumoniae OXC141

    • Public DB hit
      GI:301799149
      FQ312027
    • Hit length
      2,036,867 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312027
      0.03% cov
    • Alignment Length
      534 bp
    • CIGAR string
      438MN46MD23MI24M mismatches: 1 - insertions: 1 - deletions: 1
  • Streptococcus pneumoniae SPN034156

    Streptococcus pneumoniae SPN034156

    • Public DB hit
      GI:301795364
      FQ312045
    • Hit length
      2,024,476 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312045
      0.03% cov
    • Alignment Length
      534 bp
    • CIGAR string
      438MN46MD23MI24M mismatches: 1 - insertions: 1 - deletions: 1
  • Streptococcus pneumoniae SPN994039

    Streptococcus pneumoniae SPN994039

    • Public DB hit
      GI:301795363
      FQ312044
    • Hit length
      2,025,562 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312044
      0.03% cov
    • Alignment Length
      534 bp
    • CIGAR string
      438MN46MD23MI24M mismatches: 1 - insertions: 1 - deletions: 1
  • Streptococcus pneumoniae SPN034183

    Streptococcus pneumoniae SPN034183

    • Public DB hit
      GI:301795362
      FQ312043
    • Hit length
      2,037,254 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312043
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae SPN033038

    Streptococcus pneumoniae SPN033038

    • Public DB hit
      GI:301795361
      FQ312042
    • Hit length
      2,133,496 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312042
      0.02% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae SPN994038

    Streptococcus pneumoniae SPN994038

    • Public DB hit
      GI:301795360
      FQ312041
    • Hit length
      2,027,108 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312041
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae SPN032672

    Streptococcus pneumoniae SPN032672

    • Public DB hit
      GI:301795359
      FQ312039
    • Hit length
      2,131,190 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312039
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae INV104

    Streptococcus pneumoniae INV104

    • Public DB hit
      GI:301793325
      FQ312030
    • Hit length
      2,142,122 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312030
      0.02% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae TCH8431/19A

    Streptococcus pneumoniae TCH8431/19A

    • Public DB hit
      GI:298237097
      CP001993
    • Hit length
      2,088,772 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP001993
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae Taiwan19F-14

    Streptococcus pneumoniae Taiwan19F-14

    • Public DB hit
      GI:225726369
      CP000921
    • Hit length
      2,112,148 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000921
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae P1031

    Streptococcus pneumoniae P1031

    • Public DB hit
      GI:225724295
      CP000920
    • Hit length
      2,111,882 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000920
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae JJA

    Streptococcus pneumoniae JJA

    • Public DB hit
      GI:225722171
      CP000919
    • Hit length
      2,120,234 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000919
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae G54

    Streptococcus pneumoniae G54

    • Public DB hit
      GI:194356312
      CP001015
    • Hit length
      2,078,953 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP001015
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae Hungary19A-6

    Streptococcus pneumoniae Hungary19A-6

    • Public DB hit
      GI:168994879
      CP000936
    • Hit length
      2,245,615 bp
    • E Value
      0E0
    • BLAST Score
      968.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000936
      0.02% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae 670-6B

    Streptococcus pneumoniae 670-6B

    • Public DB hit
      GI:306483213
      CP002176
    • Hit length
      2,240,045 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002176
      0.02% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae AP200

    Streptococcus pneumoniae AP200

    • Public DB hit
      GI:306408173
      CP002121
    • Hit length
      2,130,580 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002121
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae INV200

    Streptococcus pneumoniae INV200

    • Public DB hit
      GI:301800973
      FQ312029
    • Hit length
      2,093,317 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FQ312029
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae 70585

    Streptococcus pneumoniae 70585

    • Public DB hit
      GI:225719968
      CP000918
    • Hit length
      2,184,682 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000918
      0.02% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae R6

    Streptococcus pneumoniae R6

    • Public DB hit
      GI:25307955
      AE007317
    • Hit length
      2,038,615 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AE007317
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae ATCC 700669

    Streptococcus pneumoniae ATCC 700669

    • Public DB hit
      GI:220673408
      FM211187
    • Hit length
      2,221,315 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FM211187
      0.02% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae TIGR4

    Streptococcus pneumoniae TIGR4

    • Public DB hit
      GI:193804931
      AE005672
    • Hit length
      2,160,842 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AE005672
      0.02% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae CGSP14

    Streptococcus pneumoniae CGSP14

    • Public DB hit
      GI:182628304
      CP001033
    • Hit length
      2,209,198 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP001033
      0.02% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae D39

    Streptococcus pneumoniae D39

    • Public DB hit
      GI:116075884
      CP000410
    • Hit length
      2,046,115 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000410
      0.03% cov
    • Alignment Length
      534 bp
  • Streptococcus pneumoniae

    Streptococcus pneumoniae

    • Public DB hit
      GI:14193093
      AF219111
      1 of 2 hits reported for Streptococcus pneumoniae.
    • Hit length
      3,087 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AF219111
      17.27% cov
    • Alignment Length
      534 bp
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
4
Length
177
Sequence Type
peptide
Locations
Claims, Detailed Description, Summary
Declared organism
Not specified
Determined organism
  • Streptococcus pneumoniae GA17545

    Streptococcus pneumoniae GA17545

    • Public DB hit
      GI:332074558
      EGI85032
    • Hit length
      234 aa
    • E Value
      1.66E-90
    • BLAST Score
      335.9 bits
    • Similarity
      95.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EGI85032
      75.64% cov
    • Alignment Length
      177 aa
    • CIGAR string
      8M8N15MN145M mismatches: 9 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae R6

    Streptococcus pneumoniae R6

    • Public DB hit
      GI:15903150
      NP_358700
    • Hit length
      251 aa
    • E Value
      2.18E-90
    • BLAST Score
      335.5 bits
    • Similarity
      95.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_358700
      70.52% cov
    • Alignment Length
      177 aa
    • CIGAR string
      8M8N15MN145M mismatches: 9 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae TIGR4

    Streptococcus pneumoniae TIGR4

    • Public DB hit
      GI:15901089
      NP_345693
    • Hit length
      234 aa
    • E Value
      2.52E-90
    • BLAST Score
      335.5 bits
    • Similarity
      95.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_345693
      75.64% cov
    • Alignment Length
      177 aa
    • CIGAR string
      8M8N15MN145M mismatches: 9 - insertions: 0 - deletions: 0
  • Streptococcus sp. M334

    Streptococcus sp. M334

    • Public DB hit
      GI:322376761
      ZP_08051254
    • Hit length
      234 aa
    • E Value
      1.53E-86
    • BLAST Score
      322.8 bits
    • Similarity
      93.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_08051254
      75.64% cov
    • Alignment Length
      177 aa
  • Streptococcus pneumoniae GA04375

    Streptococcus pneumoniae GA04375

    • Public DB hit
      GI:327389463
      EGE87808
    • Hit length
      214 aa
    • E Value
      1.25E-85
    • BLAST Score
      319.7 bits
    • Similarity
      99.37%
    • Coverage
      89.83%
    • Alignment (schematic)

      SEQ ID NO 4
      89.83% cov
      EGE87808
      74.3% cov
    • Alignment Length
      159 aa
  • Streptococcus mitis SK597

    Streptococcus mitis SK597

    • Public DB hit
      GI:307704960
      ZP_07641848
    • Hit length
      235 aa
    • E Value
      1.63E-81
    • BLAST Score
      306.2 bits
    • Similarity
      91.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_07641848
      75.74% cov
    • Alignment Length
      178 aa
  • Streptococcus mitis NCTC 12261

    Streptococcus mitis NCTC 12261

    • Public DB hit
      GI:307708758
      ZP_07645220
    • Hit length
      235 aa
    • E Value
      1.68E-81
    • BLAST Score
      306.2 bits
    • Similarity
      91.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_07645220
      75.74% cov
    • Alignment Length
      178 aa
  • Streptococcus mitis SK321

    Streptococcus mitis SK321

    • Public DB hit
      GI:307706668
      ZP_07643474
    • Hit length
      235 aa
    • E Value
      3.64E-81
    • BLAST Score
      305.1 bits
    • Similarity
      91.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_07643474
      75.74% cov
    • Alignment Length
      178 aa
  • Streptococcus mitis B6

    Streptococcus mitis B6

    • Public DB hit
      GI:289168019
      YP_003446288
    • Hit length
      235 aa
    • E Value
      1.19E-80
    • BLAST Score
      303.1 bits
    • Similarity
      90.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_003446288
      75.74% cov
    • Alignment Length
      178 aa
  • Streptococcus sp. M143

    Streptococcus sp. M143

    • Public DB hit
      GI:270292778
      ZP_06198989
    • Hit length
      235 aa
    • E Value
      9.51E-80
    • BLAST Score
      300.4 bits
    • Similarity
      89.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_06198989
      75.74% cov
    • Alignment Length
      178 aa
  • Streptococcus peroris ATCC 700780

    Streptococcus peroris ATCC 700780

    • Public DB hit
      GI:322391842
      ZP_08065307
    • Hit length
      234 aa
    • E Value
      1.37E-79
    • BLAST Score
      299.7 bits
    • Similarity
      90.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_08065307
      75.64% cov
    • Alignment Length
      177 aa
  • Streptococcus mitis ATCC 6249

    Streptococcus mitis ATCC 6249

    • Public DB hit
      GI:306829564
      ZP_07462754
    • Hit length
      252 aa
    • E Value
      1.56E-79
    • BLAST Score
      299.7 bits
    • Similarity
      89.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_07462754
      70.63% cov
    • Alignment Length
      178 aa
  • Streptococcus sp. oral taxon 071 str. 73H25AP

    Streptococcus sp. oral taxon 071 str. 73H25AP

    • Public DB hit
      GI:306825161
      ZP_07458503
    • Hit length
      235 aa
    • E Value
      1.98E-79
    • BLAST Score
      299.3 bits
    • Similarity
      89.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_07458503
      75.74% cov
    • Alignment Length
      178 aa
  • Streptococcus oralis ATCC 49296

    Streptococcus oralis ATCC 49296

    • Public DB hit
      GI:315613222
      ZP_07888132
    • Hit length
      252 aa
    • E Value
      4.09E-79
    • BLAST Score
      298.1 bits
    • Similarity
      89.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_07888132
      70.63% cov
    • Alignment Length
      178 aa
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
5
Length
28
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
  • Streptococcus pneumoniae 670-6B

    Streptococcus pneumoniae 670-6B

    • Public DB hit
      GI:306483213
      CP002176
    • Hit length
      2,240,045 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP002176
      0% cov
    • Alignment Length
      28 bp
    • CIGAR string
      4MN23M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae AP200

    Streptococcus pneumoniae AP200

    • Public DB hit
      GI:306408173
      CP002121
    • Hit length
      2,130,580 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP002121
      0% cov
    • Alignment Length
      28 bp
    • CIGAR string
      4MN23M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae INV200

    Streptococcus pneumoniae INV200

    • Public DB hit
      GI:301800973
      FQ312029
    • Hit length
      2,093,317 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FQ312029
      0% cov
    • Alignment Length
      28 bp
    • CIGAR string
      4MN23M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae OXC141

    Streptococcus pneumoniae OXC141

    • Public DB hit
      GI:301799149
      FQ312027
    • Hit length
      2,036,867 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FQ312027
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN034156

    Streptococcus pneumoniae SPN034156

    • Public DB hit
      GI:301795364
      FQ312045
    • Hit length
      2,024,476 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FQ312045
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN994039

    Streptococcus pneumoniae SPN994039

    • Public DB hit
      GI:301795363
      FQ312044
    • Hit length
      2,025,562 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FQ312044
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN034183

    Streptococcus pneumoniae SPN034183

    • Public DB hit
      GI:301795362
      FQ312043
    • Hit length
      2,037,254 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FQ312043
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN033038

    Streptococcus pneumoniae SPN033038

    • Public DB hit
      GI:301795361
      FQ312042
    • Hit length
      2,133,496 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FQ312042
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN994038

    Streptococcus pneumoniae SPN994038

    • Public DB hit
      GI:301795360
      FQ312041
    • Hit length
      2,027,108 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FQ312041
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN032672

    Streptococcus pneumoniae SPN032672

    • Public DB hit
      GI:301795359
      FQ312039
    • Hit length
      2,131,190 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FQ312039
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae INV104

    Streptococcus pneumoniae INV104

    • Public DB hit
      GI:301793325
      FQ312030
    • Hit length
      2,142,122 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FQ312030
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae TCH8431/19A

    Streptococcus pneumoniae TCH8431/19A

    • Public DB hit
      GI:298237097
      CP001993
    • Hit length
      2,088,772 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP001993
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae Taiwan19F-14

    Streptococcus pneumoniae Taiwan19F-14

    • Public DB hit
      GI:225726369
      CP000921
    • Hit length
      2,112,148 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000921
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae P1031

    Streptococcus pneumoniae P1031

    • Public DB hit
      GI:225724295
      CP000920
    • Hit length
      2,111,882 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000920
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae JJA

    Streptococcus pneumoniae JJA

    • Public DB hit
      GI:225722171
      CP000919
    • Hit length
      2,120,234 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000919
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae 70585

    Streptococcus pneumoniae 70585

    • Public DB hit
      GI:225719968
      CP000918
    • Hit length
      2,184,682 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000918
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae R6

    Streptococcus pneumoniae R6

    • Public DB hit
      GI:25307955
      AE007317
    • Hit length
      2,038,615 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AE007317
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae ATCC 700669

    Streptococcus pneumoniae ATCC 700669

    • Public DB hit
      GI:220673408
      FM211187
    • Hit length
      2,221,315 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      FM211187
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae G54

    Streptococcus pneumoniae G54

    • Public DB hit
      GI:194356312
      CP001015
    • Hit length
      2,078,953 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP001015
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae TIGR4

    Streptococcus pneumoniae TIGR4

    • Public DB hit
      GI:193804931
      AE005672
    • Hit length
      2,160,842 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AE005672
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae CGSP14

    Streptococcus pneumoniae CGSP14

    • Public DB hit
      GI:182628304
      CP001033
    • Hit length
      2,209,198 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP001033
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae Hungary19A-6

    Streptococcus pneumoniae Hungary19A-6

    • Public DB hit
      GI:168994879
      CP000936
    • Hit length
      2,245,615 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000936
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae

    Streptococcus pneumoniae

    • Public DB hit
      GI:133950372
      EF452723
      1 of 2 hits reported for Streptococcus pneumoniae.
    • Hit length
      1,594 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      EF452723
      1.76% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae D39

    Streptococcus pneumoniae D39

    • Public DB hit
      GI:116075884
      CP000410
    • Hit length
      2,046,115 bp
    • E Value
      1.1E-3
    • BLAST Score
      48.1 bits
    • Similarity
      96.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000410
      0% cov
    • Alignment Length
      28 bp
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
6
Length
28
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
  • Streptococcus pneumoniae 670-6B

    Streptococcus pneumoniae 670-6B

    • Public DB hit
      GI:306483213
      CP002176
    • Hit length
      2,240,045 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002176
      0% cov
    • Alignment Length
      28 bp
    • CIGAR string
      28M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae AP200

    Streptococcus pneumoniae AP200

    • Public DB hit
      GI:306408173
      CP002121
    • Hit length
      2,130,580 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002121
      0% cov
    • Alignment Length
      28 bp
    • CIGAR string
      28M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae INV200

    Streptococcus pneumoniae INV200

    • Public DB hit
      GI:301800973
      FQ312029
    • Hit length
      2,093,317 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FQ312029
      0% cov
    • Alignment Length
      28 bp
    • CIGAR string
      28M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus pneumoniae OXC141

    Streptococcus pneumoniae OXC141

    • Public DB hit
      GI:301799149
      FQ312027
    • Hit length
      2,036,867 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FQ312027
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN034156

    Streptococcus pneumoniae SPN034156

    • Public DB hit
      GI:301795364
      FQ312045
    • Hit length
      2,024,476 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FQ312045
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN994039

    Streptococcus pneumoniae SPN994039

    • Public DB hit
      GI:301795363
      FQ312044
    • Hit length
      2,025,562 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FQ312044
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN034183

    Streptococcus pneumoniae SPN034183

    • Public DB hit
      GI:301795362
      FQ312043
    • Hit length
      2,037,254 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FQ312043
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN033038

    Streptococcus pneumoniae SPN033038

    • Public DB hit
      GI:301795361
      FQ312042
    • Hit length
      2,133,496 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FQ312042
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN994038

    Streptococcus pneumoniae SPN994038

    • Public DB hit
      GI:301795360
      FQ312041
    • Hit length
      2,027,108 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FQ312041
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae SPN032672

    Streptococcus pneumoniae SPN032672

    • Public DB hit
      GI:301795359
      FQ312039
    • Hit length
      2,131,190 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FQ312039
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae INV104

    Streptococcus pneumoniae INV104

    • Public DB hit
      GI:301793325
      FQ312030
    • Hit length
      2,142,122 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FQ312030
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae TCH8431/19A

    Streptococcus pneumoniae TCH8431/19A

    • Public DB hit
      GI:298237097
      CP001993
    • Hit length
      2,088,772 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001993
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae Taiwan19F-14

    Streptococcus pneumoniae Taiwan19F-14

    • Public DB hit
      GI:225726369
      CP000921
    • Hit length
      2,112,148 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000921
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae P1031

    Streptococcus pneumoniae P1031

    • Public DB hit
      GI:225724295
      CP000920
    • Hit length
      2,111,882 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000920
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae JJA

    Streptococcus pneumoniae JJA

    • Public DB hit
      GI:225722171
      CP000919
    • Hit length
      2,120,234 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000919
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae 70585

    Streptococcus pneumoniae 70585

    • Public DB hit
      GI:225719968
      CP000918
    • Hit length
      2,184,682 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000918
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae R6

    Streptococcus pneumoniae R6

    • Public DB hit
      GI:25307955
      AE007317
    • Hit length
      2,038,615 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AE007317
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae ATCC 700669

    Streptococcus pneumoniae ATCC 700669

    • Public DB hit
      GI:220673408
      FM211187
    • Hit length
      2,221,315 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      FM211187
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae G54

    Streptococcus pneumoniae G54

    • Public DB hit
      GI:194356312
      CP001015
    • Hit length
      2,078,953 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001015
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae TIGR4

    Streptococcus pneumoniae TIGR4

    • Public DB hit
      GI:193804931
      AE005672
    • Hit length
      2,160,842 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AE005672
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae CGSP14

    Streptococcus pneumoniae CGSP14

    • Public DB hit
      GI:182628304
      CP001033
    • Hit length
      2,209,198 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001033
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae Hungary19A-6

    Streptococcus pneumoniae Hungary19A-6

    • Public DB hit
      GI:168994879
      CP000936
    • Hit length
      2,245,615 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000936
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae D39

    Streptococcus pneumoniae D39

    • Public DB hit
      GI:116075884
      CP000410
    • Hit length
      2,046,115 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000410
      0% cov
    • Alignment Length
      28 bp
  • Streptococcus pneumoniae

    Streptococcus pneumoniae

    • Public DB hit
      GI:14193093
      AF219111
      1 of 2 hits reported for Streptococcus pneumoniae.
    • Hit length
      3,087 bp
    • E Value
      4.51E-6
    • BLAST Score
      56 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AF219111
      0.91% cov
    • Alignment Length
      28 bp
Occurrence
6 times in PatSeqDB
Tools

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