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Search for Biological Sequences disclosed in Patents

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Data obtained from: EPO Sequence Listings
8 sequences found in this patent (in total)

Displaying 8 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
342
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
302
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
303
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15240726
      NP_196339
      1 of 5 hits reported for Arabidopsis thaliana.
    • Hit length
      303 aa
    • E Value
      1.03E-175
    • BLAST Score
      620.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_196339
      100% cov
    • Alignment Length
      303 aa
    • CIGAR string
      303M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297810835
      XP_002873301
      1 of 2 hits reported for Arabidopsis lyrata subsp. lyrata.
    • Hit length
      297 aa
    • E Value
      2.8E-161
    • BLAST Score
      572.8 bits
    • Similarity
      95.05%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002873301
      100% cov
    • Alignment Length
      303 aa
    • CIGAR string
      4MN5MN5MN27MN119MN31MN16MN6MNMN16MN9M3D19M2N3MN3M3D20M mismatches: 13 - insertions: 0 - deletions: 6
  • Eutrema halophilum

    Eutrema halophilum

    • Public DB hit
      GI:312282623
      BAJ34177
    • Hit length
      293 aa
    • E Value
      3.1E-95
    • BLAST Score
      353.6 bits
    • Similarity
      77.63%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BAJ34177
      100% cov
    • Alignment Length
      304 aa
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
269
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:186510943
      NP_190746
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      269 aa
    • E Value
      1.26E-153
    • BLAST Score
      547.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_190746
      100% cov
    • Alignment Length
      269 aa
    • CIGAR string
      269M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297819880
      XP_002877823
    • Hit length
      271 aa
    • E Value
      2.25E-129
    • BLAST Score
      466.5 bits
    • Similarity
      94.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002877823
      100% cov
    • Alignment Length
      273 aa
Occurrence
23 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
215
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:334182492
      NP_172670
    • Hit length
      215 aa
    • E Value
      5.25E-124
    • BLAST Score
      448 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_172670
      100% cov
    • Alignment Length
      215 aa
    • CIGAR string
      215M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297844062
      XP_002889912
    • Hit length
      212 aa
    • E Value
      3.25E-82
    • BLAST Score
      309.3 bits
    • Similarity
      93.26%
    • Coverage
      82.33%
    • Alignment (schematic)

      SEQ ID NO 5
      82.33% cov
      XP_002889912
      83.49% cov
    • Alignment Length
      178 aa
    • CIGAR string
      15H5MN3MN6MN6M3NMINM3N3MN16MN5MNMN9MN25MN42MN3MN4MD3MN22MNM23H mismatches: 20 - insertions: 1 - deletions: 1
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
1,043
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15225945
      NP_182147
    • Hit length
      1,043 aa
    • E Value
      0E0
    • BLAST Score
      2,143.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_182147
      100% cov
    • Alignment Length
      1,043 aa
    • CIGAR string
      1043M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297824689
      XP_002880227
    • Hit length
      1,050 aa
    • E Value
      0E0
    • BLAST Score
      1,783.1 bits
    • Similarity
      90.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002880227
      100% cov
    • Alignment Length
      1,051 aa
    • CIGAR string
      5MN11MN2MN10MN5MN8MN4M3I3MN4M2I9M3N10MN14MNM2N9MN3MNMNM2NM2N11MN3M3I27M2N2MNMNMN4M2N2MN2MN9MN2MN8MN9MN4MN5MN6MN20MN9MN3MN11MN4MN14M2N3MN30MN2MN8MN11MN2MNMN4M2NM2N3MN10MN5MN4MN23MN3MN4MN2MNMN8MN16MN8MN3MN2MN7MN2MN6MN2MN8MN2MNMN10M2N2MN10MN2MN2MN6MN3MN4MN33MN8MN6M3N9MN4MN5MN13MN3MN2MN3MN15MN26MN8MN6MN11MN8MN3MNMNMN10MN26M3N7MN10MND9MN3MN8MNMN7MN3MNMN4MN6MNMNMN2MN15MN5MN4M2N2MN8MNMN2MN6MN7MN14MN9MN7MN8MN64MN7M mismatches: 140 - insertions: 8 - deletions: 1
Occurrence
16 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
446
Type
peptide
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15241803
      NP_201045
    • Hit length
      446 aa
    • E Value
      0E0
    • BLAST Score
      896 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_201045
      100% cov
    • Alignment Length
      446 aa
    • CIGAR string
      446M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297797203
      XP_002866486
    • Hit length
      447 aa
    • E Value
      0E0
    • BLAST Score
      724.5 bits
    • Similarity
      95.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002866486
      100% cov
    • Alignment Length
      449 aa
    • CIGAR string
      M2N12MN22MN3MN4MN4MN12MNMN15MN45MN8MN3MN14MN27MNM2D7M4N19MN8MN17MNM4NM2NM3I16MN14MN69MN73MN14M mismatches: 32 - insertions: 3 - deletions: 2
Occurrence
33 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
262
Type
peptide
Locations
Undetermined

Declared organism:
Oryza sativa

Determined organism:
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:115440841
      NP_001044700
      1 of 2 hits reported for Oryza sativa Japonica Group.
    • Hit length
      262 aa
    • E Value
      6.36E-149
    • BLAST Score
      531.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001044700
      100% cov
    • Alignment Length
      262 aa
    • CIGAR string
      262M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryza sativa Indica Group

    Oryza sativa Indica Group

    • Public DB hit
      GI:218189312
      EEC71739
    • Hit length
      262 aa
    • E Value
      1.02E-148
    • BLAST Score
      530.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EEC71739
      100% cov
    • Alignment Length
      262 aa
    • CIGAR string
      161MN100M mismatches: 1 - insertions: 0 - deletions: 0
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242054875
      XP_002456583
    • Hit length
      259 aa
    • E Value
      5.32E-129
    • BLAST Score
      465.3 bits
    • Similarity
      92.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002456583
      100% cov
    • Alignment Length
      263 aa
  • Zea mays

    Zea mays

    • Public DB hit
      GI:226502648
      NP_001141543
      1 of 4 hits reported for Zea mays.
    • Hit length
      259 aa
    • E Value
      6.45E-127
    • BLAST Score
      458.4 bits
    • Similarity
      91.63%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001141543
      100% cov
    • Alignment Length
      263 aa
  • Hordeum vulgare subsp. vulgare

    Hordeum vulgare subsp. vulgare

    • Public DB hit
      GI:326501684
      BAK02631
      1 of 2 hits reported for Hordeum vulgare subsp. vulgare.
    • Hit length
      259 aa
    • E Value
      2.17E-118
    • BLAST Score
      429.9 bits
    • Similarity
      89.53%
    • Coverage
      98.47%
    • Alignment (schematic)

      SEQ ID NO 8
      98.47% cov
      BAK02631
      99.61% cov
    • Alignment Length
      258 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255551196
      XP_002516645
    • Hit length
      265 aa
    • E Value
      8.56E-73
    • BLAST Score
      278.5 bits
    • Similarity
      75.4%
    • Coverage
      93.51%
    • Alignment (schematic)

      SEQ ID NO 8
      93.51% cov
      XP_002516645
      92.83% cov
    • Alignment Length
      248 aa
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder

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