Secreted And Transmembrane Polypeptides And Nucleic Acids Encoding The Same

  • Published: Jul 16, 2008
  • Earliest Priority: Sep 01 2000
  • Family: 2
  • Cited Works: 161
  • Cited by: 0
  • Cites: 69
  • Sequences: 116
  • Additional Info: Cited Works
Data obtained from: EPO Sequence Listings DDBJ Pat EMBL-EBI Pat NCBI GenBank (EBI)
116 sequences found in this patent (in total)

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Displaying 1 - 10 of 116 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
1,943
Sequence Type
DNA
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:37182765
      AY358824
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      1,943 bp
    • E Value
      0E0
    • BLAST Score
      3,589.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AY358824
      100% cov
    • Alignment Length
      1,943 bp
    • CIGAR string
      1943M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332834577
      XM_001148819
    • Hit length
      2,487 bp
    • E Value
      0E0
    • BLAST Score
      3,482.1 bits
    • Similarity
      99.17%
    • Coverage
      99.38%
    • Alignment (schematic)

      SEQ ID NO 1
      99.38% cov
      XM_001148819
      77.8% cov
    • Alignment Length
      1,935 bp
    • CIGAR string
      12H159MN360MN97MN185MN39MN295MN5M4I81MN168MN38MN39MN184MN138MN131M mismatches: 12 - insertions: 4 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:55728230
      CR858647
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      1,960 bp
    • E Value
      0E0
    • BLAST Score
      3,399 bits
    • Similarity
      98.4%
    • Coverage
      99.38%
    • Alignment (schematic)

      SEQ ID NO 1
      99.38% cov
      CR858647
      98.72% cov
    • Alignment Length
      1,935 bp
    • CIGAR string
      11H5MN38MN114MN210MN272MN201MN28MN86MN66MN112MN5M4I71MN9MN12MN113MN12MN28MN28M2N8MN139MN29MNMN34M2N16MN35MN31MN201M1H mismatches: 27 - insertions: 4 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332250868
      XM_003274524
    • Hit length
      2,451 bp
    • E Value
      0E0
    • BLAST Score
      3,227.2 bits
    • Similarity
      96.9%
    • Coverage
      99.33%
    • Alignment (schematic)

      SEQ ID NO 1
      99.33% cov
      XM_003274524
      78.54% cov
    • Alignment Length
      1,937 bp
    • CIGAR string
      13H3MN16MN21MN40MN29MN74MN8MN66MN85MN5MN152MN21MN109MN116MN44MN26MN12MN25MN2MN154MN88MD4MN17MN6MI2M2IMI23MIMDM2D49MN12MN29MN51MN31MN41MI6MD19MNI2MND8MN35MN69MN33MN15MN50M2N13MN2MN35MN115MN44M4DMDMD57MN8M mismatches: 41 - insertions: 7 - deletions: 12
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297301001
      XM_002805652
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      2,018 bp
    • E Value
      0E0
    • BLAST Score
      2,966.8 bits
    • Similarity
      94.89%
    • Coverage
      97.99%
    • Alignment (schematic)

      SEQ ID NO 1
      97.99% cov
      XM_002805652
      93.95% cov
    • Alignment Length
      1,918 bp
    • CIGAR string
      39H16MN40MN104MN35MN17MN23MN77MN20MN59MN42MN31MN43MN31MN21MN33MN8MN131MN69MN28MN35MN29MD2MI36MN6M2N72MN17MN9MN28MN23MN6MI2MIM2I43MN21MD6MN4MN12MN23MN29M2N52MN3MNMN24MN16MN4M2D2MN19M2N2MN4M2N28MN5MD86MN7MN2DM2D2M5D2M5D2MDMD2MD28MN18MN2MN16MN22MN12MN5MN33MN11MN23MIM8I67MN18MN32MN25MN12M mismatches: 62 - insertions: 14 - deletions: 22
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:67969812
      AB169162
    • Hit length
      2,101 bp
    • E Value
      0E0
    • BLAST Score
      2,963.1 bits
    • Similarity
      94.88%
    • Coverage
      97.84%
    • Alignment (schematic)

      SEQ ID NO 1
      97.84% cov
      AB169162
      90.2% cov
    • Alignment Length
      1,915 bp
    • CIGAR string
      39H16MN40MN104MN35MN17MN23MN41MN56MN59MN42MN31MN43MN20MN10MN21MN33MN8MN131MN69MN28MN35MN29MD2MI36MN6M2N41MN30MN17MN9MN28MN23MN6MI2MIM2I43MN21MD11MN12MN23MN29M2N52MN3MNMN24MN16MNMN6MN19M2N2MN4M2N28MN5MD86MN7MN2DM2D2M5D2M5D2MDMD2MD8MN19MN18MN2MN16MN22MN12MN5MN33MN11MN23MIM8I67MN51MN25MN9M3H mismatches: 64 - insertions: 14 - deletions: 20
Occurrence
262 times in PatSeqDB
Tools
SEQ ID NO
2
Length
345
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:118200356
      NP_055209
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      345 aa
    • E Value
      0E0
    • BLAST Score
      698.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_055209
      100% cov
    • Alignment Length
      345 aa
    • CIGAR string
      345M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332250869
      XP_003274572
    • Hit length
      345 aa
    • E Value
      0E0
    • BLAST Score
      696.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003274572
      100% cov
    • Alignment Length
      345 aa
    • CIGAR string
      155MN164MN24M mismatches: 2 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332834578
      XP_001148819
    • Hit length
      345 aa
    • E Value
      0E0
    • BLAST Score
      695.3 bits
    • Similarity
      99.71%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001148819
      100% cov
    • Alignment Length
      345 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:55728231
      CAH90862
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      345 aa
    • E Value
      0E0
    • BLAST Score
      694.9 bits
    • Similarity
      99.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CAH90862
      100% cov
    • Alignment Length
      345 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296220226
      XP_002756216
    • Hit length
      350 aa
    • E Value
      0E0
    • BLAST Score
      672.2 bits
    • Similarity
      97.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002756216
      100% cov
    • Alignment Length
      350 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297301002
      XP_002805698
    • Hit length
      345 aa
    • E Value
      0E0
    • BLAST Score
      658.7 bits
    • Similarity
      98.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002805698
      100% cov
    • Alignment Length
      345 aa
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:67969813
      BAE01254
    • Hit length
      345 aa
    • E Value
      0E0
    • BLAST Score
      654.4 bits
    • Similarity
      98.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAE01254
      100% cov
    • Alignment Length
      345 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:74195753
      BAE30441
    • Hit length
      346 aa
    • E Value
      0E0
    • BLAST Score
      650.2 bits
    • Similarity
      95.66%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAE30441
      100% cov
    • Alignment Length
      346 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:194042216
      XP_001927428
    • Hit length
      345 aa
    • E Value
      0E0
    • BLAST Score
      647.1 bits
    • Similarity
      98.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001927428
      100% cov
    • Alignment Length
      345 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149690713
      XP_001501372
    • Hit length
      345 aa
    • E Value
      0E0
    • BLAST Score
      646 bits
    • Similarity
      98.55%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001501372
      100% cov
    • Alignment Length
      345 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:77404184
      NP_001029224
    • Hit length
      345 aa
    • E Value
      0E0
    • BLAST Score
      646 bits
    • Similarity
      97.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001029224
      100% cov
    • Alignment Length
      345 aa
Occurrence
316 times in PatSeqDB
Tools
SEQ ID NO
3
Length
1,110
Sequence Type
DNA
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:21265115
      NM_003270
      1 of 19 hits reported for Homo sapiens.
    • Hit length
      2,069 bp
    • E Value
      0E0
    • BLAST Score
      2,047.2 bits
    • Similarity
      99.91%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_003270
      53.65% cov
    • Alignment Length
      1,110 bp
    • CIGAR string
      737MN372M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332861151
      XM_529071
    • Hit length
      2,587 bp
    • E Value
      0E0
    • BLAST Score
      2,036.1 bits
    • Similarity
      99.82%
    • Coverage
      99.73%
    • Alignment (schematic)

      SEQ ID NO 3
      99.73% cov
      XM_529071
      42.79% cov
    • Alignment Length
      1,107 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197102707
      NM_001132192
    • Hit length
      1,810 bp
    • E Value
      0E0
    • BLAST Score
      1,951.2 bits
    • Similarity
      98.46%
    • Coverage
      99.73%
    • Alignment (schematic)

      SEQ ID NO 3
      99.73% cov
      NM_001132192
      61.1% cov
    • Alignment Length
      1,107 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332254735
      XM_003276440
    • Hit length
      2,587 bp
    • E Value
      0E0
    • BLAST Score
      1,947.5 bits
    • Similarity
      98.37%
    • Coverage
      99.73%
    • Alignment (schematic)

      SEQ ID NO 3
      99.73% cov
      XM_003276440
      42.79% cov
    • Alignment Length
      1,107 bp
Occurrence
254 times in PatSeqDB
Tools
SEQ ID NO
4
Length
245
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:30584203
      AAP36350
    • Hit length
      246 aa
    • E Value
      3.92E-141
    • BLAST Score
      505.4 bits
    • Similarity
      99.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAP36350
      99.59% cov
    • Alignment Length
      245 aa
    • CIGAR string
      232MN12M mismatches: 1 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:62089338
      BAD93113
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      285 aa
    • E Value
      4.02E-141
    • BLAST Score
      505.4 bits
    • Similarity
      99.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BAD93113
      85.96% cov
    • Alignment Length
      245 aa
    • CIGAR string
      107MN124MN12M mismatches: 2 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197102708
      NP_001125664
    • Hit length
      245 aa
    • E Value
      7.21E-141
    • BLAST Score
      504.6 bits
    • Similarity
      99.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001125664
      100% cov
    • Alignment Length
      245 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332254736
      XP_003276488
    • Hit length
      245 aa
    • E Value
      3.03E-140
    • BLAST Score
      502.3 bits
    • Similarity
      99.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003276488
      100% cov
    • Alignment Length
      245 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:194041129
      XP_001928715
    • Hit length
      245 aa
    • E Value
      4.8E-137
    • BLAST Score
      491.9 bits
    • Similarity
      97.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001928715
      100% cov
    • Alignment Length
      245 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149755176
      XP_001492387
    • Hit length
      245 aa
    • E Value
      3.01E-136
    • BLAST Score
      489.2 bits
    • Similarity
      98.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001492387
      100% cov
    • Alignment Length
      245 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291408111
      XP_002720439
    • Hit length
      245 aa
    • E Value
      1.37E-135
    • BLAST Score
      486.9 bits
    • Similarity
      97.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002720439
      100% cov
    • Alignment Length
      245 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:57112251
      XP_538102
    • Hit length
      245 aa
    • E Value
      3.03E-135
    • BLAST Score
      485.7 bits
    • Similarity
      97.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_538102
      100% cov
    • Alignment Length
      245 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:84000187
      NP_001033198
    • Hit length
      245 aa
    • E Value
      1.36E-134
    • BLAST Score
      483.8 bits
    • Similarity
      97.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001033198
      100% cov
    • Alignment Length
      245 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:189181702
      NP_001094142
    • Hit length
      245 aa
    • E Value
      6.71E-131
    • BLAST Score
      471.5 bits
    • Similarity
      95.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001094142
      100% cov
    • Alignment Length
      245 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:31560378
      NP_062630
    • Hit length
      245 aa
    • E Value
      2.18E-130
    • BLAST Score
      469.5 bits
    • Similarity
      94.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_062630
      100% cov
    • Alignment Length
      245 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297304332
      XP_001091467
    • Hit length
      245 aa
    • E Value
      6.54E-130
    • BLAST Score
      468 bits
    • Similarity
      94.29%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001091467
      100% cov
    • Alignment Length
      245 aa
Occurrence
274 times in PatSeqDB
Tools
SEQ ID NO
5
Length
1,373
Sequence Type
DNA
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:37181299
      AY358097
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      1,373 bp
    • E Value
      0E0
    • BLAST Score
      2,536.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AY358097
      100% cov
    • Alignment Length
      1,373 bp
    • CIGAR string
      1373M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332226540
      XM_003262400
      1 of 3 hits reported for Nomascus leucogenys.
    • Hit length
      1,374 bp
    • E Value
      0E0
    • BLAST Score
      2,385.1 bits
    • Similarity
      98.04%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 5
      99.93% cov
      XM_003262400
      99.85% cov
    • Alignment Length
      1,375 bp
    • CIGAR string
      1H35MN13MN157MN7MN15MNMN102MN41MN168MN133MN11MN103MN44MN43MN28MN5MN68MN16MN44MN39MN60MN145M3I56MDM2D13M mismatches: 21 - insertions: 3 - deletions: 3
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332813194
      XM_515488
    • Hit length
      1,348 bp
    • E Value
      0E0
    • BLAST Score
      1,803.5 bits
    • Similarity
      99.7%
    • Coverage
      71.74%
    • Alignment (schematic)

      SEQ ID NO 5
      71.74% cov
      XM_515488
      73.07% cov
    • Alignment Length
      985 bp
    • CIGAR string
      388H641MN154MN11MN176M mismatches: 3 - insertions: 0 - deletions: 0
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:90078113
      AB171674
    • Hit length
      2,053 bp
    • E Value
      0E0
    • BLAST Score
      1,733.3 bits
    • Similarity
      98.47%
    • Coverage
      71.6%
    • Alignment (schematic)

      SEQ ID NO 5
      71.6% cov
      AB171674
      47.88% cov
    • Alignment Length
      983 bp
    • CIGAR string
      388H161MN176MN77MN82MN10MN23MN67MN61M2N98MN13MN49MN44MN56MN48MN3M2H mismatches: 15 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296223820
      XM_002757756
    • Hit length
      1,139 bp
    • E Value
      0E0
    • BLAST Score
      1,689 bits
    • Similarity
      95.4%
    • Coverage
      77.28%
    • Alignment (schematic)

      SEQ ID NO 5
      77.28% cov
      XM_002757756
      93.15% cov
    • Alignment Length
      1,066 bp
    • CIGAR string
      312H4MN14M2N6MN15MN22M2N2MD2MN2MI35MN48MN7MN33MN22MN113MN41MN27MN4MN14MN139MN19MND3MI16MN20MN19MN7MN25MN7MN10MN6MN29MN7MN67MN22MN13MN9MN24M3I14MN88MN5MN4MN40MDM2D7MN5M mismatches: 39 - insertions: 5 - deletions: 5
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:123992811
      DQ893082
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,069 bp
    • E Value
      0E0
    • BLAST Score
      1,683.4 bits
    • Similarity
      99.89%
    • Coverage
      66.57%
    • Alignment (schematic)

      SEQ ID NO 5
      66.57% cov
      DQ893082
      85.5% cov
    • Alignment Length
      914 bp
    • CIGAR string
      388H621MN292M71H mismatches: 1 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:300116287
      NM_001190915
    • Hit length
      1,163 bp
    • E Value
      0E0
    • BLAST Score
      1,650.2 bits
    • Similarity
      98.61%
    • Coverage
      67.88%
    • Alignment (schematic)

      SEQ ID NO 5
      67.88% cov
      NM_001190915
      80.14% cov
    • Alignment Length
      932 bp
    • CIGAR string
      388H161MN176MN77MN82MN10MN23MN67MN61M2N98MN13MN49MN44MN58M53H mismatches: 13 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73969667
      XM_847224
    • Hit length
      1,169 bp
    • E Value
      0E0
    • BLAST Score
      1,487.7 bits
    • Similarity
      89.81%
    • Coverage
      85.14%
    • Alignment (schematic)

      SEQ ID NO 5
      85.14% cov
      XM_847224
      99.91% cov
    • Alignment Length
      1,187 bp
    • CIGAR string
      199H8MDM2D8MN8MN5MN14MN17MN32MN8MN6M2D2MIMNMIMN3MNMN5MIMDMDMD3NMN3MIMN3MDMD4M2IMN2M2IN2M2NMI4NMNMN2M4N2MI77MN2MN3MNMN47MN22MN147MN5MN6MN6MN12MN59MN14MD6MI26MN2MIMD7M2NMNMN4MN5MIMD6MN8MN42MN20MN2MN9MN6MDMNI5MIM2I16MN22MN6MNMN2MN5MN23MN6M2N15MN2MN2MN8MNMN50MN6MN11MIMND15MN2M2N91MN25MND4MN5M2N2MN5MN2DMD9MN20MN6M5H mismatches: 84 - insertions: 18 - deletions: 19
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194220718
      XM_001496377
    • Hit length
      1,283 bp
    • E Value
      0E0
    • BLAST Score
      1,447 bits
    • Similarity
      93.24%
    • Coverage
      71.74%
    • Alignment (schematic)

      SEQ ID NO 5
      71.74% cov
      XM_001496377
      76.7% cov
    • Alignment Length
      991 bp
    • CIGAR string
      388H32MN32MN18MN76MN32MN21MN88MN5MN20MN5MN29MN29MN14MD6MI30MN8MNMNMN4M2N5MN46MN4MN6MN9MN10MN2MN9MN6MDMI6MN2M2IMI15MN4MN27MN3MNMN23MN6MNIMD8MN5MN2MN59MN11MN12MN16MN2M3D15MN74MN22MN2MND4MN4MN4MN5M2N12MN17MN2MN6MN4M mismatches: 54 - insertions: 6 - deletions: 7
Occurrence
282 times in PatSeqDB
Tools
SEQ ID NO
6
Length
367
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:37181300
      AAQ88464
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      367 aa
    • E Value
      0E0
    • BLAST Score
      748.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAQ88464
      100% cov
    • Alignment Length
      367 aa
    • CIGAR string
      367M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332226541
      XP_003262448
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      368 aa
    • E Value
      0E0
    • BLAST Score
      721.1 bits
    • Similarity
      97.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003262448
      99.73% cov
    • Alignment Length
      367 aa
    • CIGAR string
      3MN7MN34MN13MN55MN44MN3MN33MN29MN9MNMN22MN33MN19MN48M mismatches: 14 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:300116288
      NP_001177844
    • Hit length
      342 aa
    • E Value
      0E0
    • BLAST Score
      662.1 bits
    • Similarity
      91.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001177844
      100% cov
    • Alignment Length
      367 aa
    • CIGAR string
      11MN27M25D111MN53MN3MN7MN42MN37MN16MN27M mismatches: 8 - insertions: 0 - deletions: 25
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332813195
      XP_515488
    • Hit length
      342 aa
    • E Value
      2.78E-178
    • BLAST Score
      629.8 bits
    • Similarity
      92.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_515488
      100% cov
    • Alignment Length
      367 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73969668
      XP_852317
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      368 aa
    • E Value
      1.66E-176
    • BLAST Score
      624 bits
    • Similarity
      91.55%
    • Coverage
      96.19%
    • Alignment (schematic)

      SEQ ID NO 6
      96.19% cov
      XP_852317
      96.47% cov
    • Alignment Length
      355 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296223821
      XP_002757802
    • Hit length
      356 aa
    • E Value
      1.72E-176
    • BLAST Score
      624 bits
    • Similarity
      96.67%
    • Coverage
      89.65%
    • Alignment (schematic)

      SEQ ID NO 6
      89.65% cov
      XP_002757802
      92.7% cov
    • Alignment Length
      330 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335285465
      XP_003125177
    • Hit length
      450 aa
    • E Value
      1.09E-172
    • BLAST Score
      611.3 bits
    • Similarity
      88.67%
    • Coverage
      98.37%
    • Alignment (schematic)

      SEQ ID NO 6
      98.37% cov
      XP_003125177
      74.89% cov
    • Alignment Length
      362 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149727564
      XP_001496427
    • Hit length
      342 aa
    • E Value
      9.43E-170
    • BLAST Score
      601.7 bits
    • Similarity
      89.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001496427
      100% cov
    • Alignment Length
      368 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297667604
      XP_002812072
    • Hit length
      358 aa
    • E Value
      2.25E-169
    • BLAST Score
      600.1 bits
    • Similarity
      90.37%
    • Coverage
      91.83%
    • Alignment (schematic)

      SEQ ID NO 6
      91.83% cov
      XP_002812072
      98.6% cov
    • Alignment Length
      353 aa
Occurrence
277 times in PatSeqDB
Tools
SEQ ID NO
7
Length
932
Sequence Type
DNA
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:37183053
      AY358968
      1 of 17 hits reported for Homo sapiens.
    • Hit length
      932 bp
    • E Value
      0E0
    • BLAST Score
      1,718.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY358968
      100% cov
    • Alignment Length
      932 bp
    • CIGAR string
      932M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332812761
      XM_001154610
    • Hit length
      1,256 bp
    • E Value
      0E0
    • BLAST Score
      1,635.4 bits
    • Similarity
      99.12%
    • Coverage
      97.64%
    • Alignment (schematic)

      SEQ ID NO 7
      97.64% cov
      XM_001154610
      72.29% cov
    • Alignment Length
      911 bp
    • CIGAR string
      158MN230MN6MN238MN245M3D19MI7M22H mismatches: 4 - insertions: 1 - deletions: 3
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297667980
      XM_002812213
    • Hit length
      1,275 bp
    • E Value
      0E0
    • BLAST Score
      1,609.6 bits
    • Similarity
      98.57%
    • Coverage
      97.64%
    • Alignment (schematic)

      SEQ ID NO 7
      97.64% cov
      XM_002812213
      71.37% cov
    • Alignment Length
      911 bp
    • CIGAR string
      30MN58MN43MN24MN230MN38MN206MN33MN84MN32MN58MND55MI7M22H mismatches: 11 - insertions: 1 - deletions: 1
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332243024
      XM_003270635
    • Hit length
      1,075 bp
    • E Value
      0E0
    • BLAST Score
      1,580 bits
    • Similarity
      98.02%
    • Coverage
      97.64%
    • Alignment (schematic)

      SEQ ID NO 7
      97.64% cov
      XM_003270635
      84.56% cov
    • Alignment Length
      910 bp
    • CIGAR string
      133MN24MN129MN62MN12MN24MN184MN60MN14MN18MN84MN29MN2MN19MN38MN31MN17MND12M22H mismatches: 17 - insertions: 0 - deletions: 1
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:302565036
      NM_001193926
    • Hit length
      1,227 bp
    • E Value
      0E0
    • BLAST Score
      1,508 bits
    • Similarity
      96.7%
    • Coverage
      97.32%
    • Alignment (schematic)

      SEQ ID NO 7
      97.32% cov
      NM_001193926
      73.84% cov
    • Alignment Length
      908 bp
    • CIGAR string
      4MN12MN25MN7MN66MN14MN24MN22MN105MN58MN4MN37MN101MN82MN47MN12MN14MN18MN6MN26MN28MN6MN14MN32MN12MN28MN14MI3MD26MN28MD3M25H mismatches: 27 - insertions: 1 - deletions: 2
Occurrence
181 times in PatSeqDB
Tools
SEQ ID NO
8
Length
229
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:119621023
      EAX00618
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      284 aa
    • E Value
      6.72E-132
    • BLAST Score
      474.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EAX00618
      80.63% cov
    • Alignment Length
      229 aa
    • CIGAR string
      229M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114576571
      XP_001154610
    • Hit length
      284 aa
    • E Value
      2.53E-129
    • BLAST Score
      466.1 bits
    • Similarity
      99.13%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001154610
      80.63% cov
    • Alignment Length
      229 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297667981
      XP_002812259
    • Hit length
      348 aa
    • E Value
      9.89E-124
    • BLAST Score
      447.2 bits
    • Similarity
      97.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002812259
      65.8% cov
    • Alignment Length
      229 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332243025
      XP_003270683
    • Hit length
      229 aa
    • E Value
      2.72E-121
    • BLAST Score
      439.1 bits
    • Similarity
      97.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003270683
      100% cov
    • Alignment Length
      229 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296224284
      XP_002807595
    • Hit length
      383 aa
    • E Value
      4.71E-121
    • BLAST Score
      438.3 bits
    • Similarity
      95.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002807595
      59.79% cov
    • Alignment Length
      229 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:302565037
      NP_001180855
    • Hit length
      284 aa
    • E Value
      8.66E-121
    • BLAST Score
      437.6 bits
    • Similarity
      97.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001180855
      80.63% cov
    • Alignment Length
      229 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:119936484
      ABM06134
      1 of 2 hits reported for Bos taurus.
    • Hit length
      234 aa
    • E Value
      1.5E-106
    • BLAST Score
      390.2 bits
    • Similarity
      88.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ABM06134
      97.86% cov
    • Alignment Length
      229 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311252936
      XP_003125342
    • Hit length
      229 aa
    • E Value
      2.8E-104
    • BLAST Score
      382.9 bits
    • Similarity
      86.9%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003125342
      100% cov
    • Alignment Length
      229 aa
Occurrence
218 times in PatSeqDB
Tools
SEQ ID NO
9
Length
2,482
Sequence Type
DNA
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:37183055
      AY358969
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      2,482 bp
    • E Value
      0E0
    • BLAST Score
      4,584.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AY358969
      100% cov
    • Alignment Length
      2,482 bp
    • CIGAR string
      2482M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843566
      XM_003314626
    • Hit length
      3,031 bp
    • E Value
      0E0
    • BLAST Score
      4,486.6 bits
    • Similarity
      99.63%
    • Coverage
      98.95%
    • Alignment (schematic)

      SEQ ID NO 9
      98.95% cov
      XM_003314626
      81.03% cov
    • Alignment Length
      2,456 bp
    • CIGAR string
      384MN20MN551MN633MN41MN495MN152MN98MN45MN28M26H mismatches: 9 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696351
      XM_002825315
    • Hit length
      2,480 bp
    • E Value
      0E0
    • BLAST Score
      4,115.5 bits
    • Similarity
      96.85%
    • Coverage
      98.95%
    • Alignment (schematic)

      SEQ ID NO 9
      98.95% cov
      XM_002825315
      99.56% cov
    • Alignment Length
      2,477 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332235192
      XM_003266743
    • Hit length
      2,561 bp
    • E Value
      0E0
    • BLAST Score
      4,019.4 bits
    • Similarity
      97.66%
    • Coverage
      94.16%
    • Alignment (schematic)

      SEQ ID NO 9
      94.16% cov
      XM_003266743
      91.57% cov
    • Alignment Length
      2,347 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297296179
      XM_001098832
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      2,075 bp
    • E Value
      0E0
    • BLAST Score
      3,330.6 bits
    • Similarity
      96.44%
    • Coverage
      81.47%
    • Alignment (schematic)

      SEQ ID NO 9
      81.47% cov
      XM_001098832
      97.16% cov
    • Alignment Length
      2,024 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296214155
      XM_002753597
    • Hit length
      1,965 bp
    • E Value
      0E0
    • BLAST Score
      2,536.6 bits
    • Similarity
      94.23%
    • Coverage
      66.8%
    • Alignment (schematic)

      SEQ ID NO 9
      66.8% cov
      XM_002753597
      84.68% cov
    • Alignment Length
      1,665 bp
Occurrence
240 times in PatSeqDB
Tools
SEQ ID NO
10
Length
529
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:31323051
      AAP44001
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      529 aa
    • E Value
      0E0
    • BLAST Score
      1,099 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAP44001
      100% cov
    • Alignment Length
      529 aa
    • CIGAR string
      529M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297696352
      XP_002825361
    • Hit length
      532 aa
    • E Value
      0E0
    • BLAST Score
      989.6 bits
    • Similarity
      96.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002825361
      100% cov
    • Alignment Length
      532 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332235193
      XP_003266791
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      531 aa
    • E Value
      0E0
    • BLAST Score
      975.7 bits
    • Similarity
      96.99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_003266791
      100% cov
    • Alignment Length
      531 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:32880107
      AAP88884
    • Hit length
      514 aa
    • E Value
      0E0
    • BLAST Score
      961.4 bits
    • Similarity
      96.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAP88884
      99.81% cov
    • Alignment Length
      529 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843571
      XP_003314675
    • Hit length
      617 aa
    • E Value
      0E0
    • BLAST Score
      958.7 bits
    • Similarity
      96.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_003314675
      83.14% cov
    • Alignment Length
      529 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109080704
      XP_001098832
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      529 aa
    • E Value
      0E0
    • BLAST Score
      948.3 bits
    • Similarity
      96.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_001098832
      100% cov
    • Alignment Length
      529 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296214156
      XP_002753643
    • Hit length
      654 aa
    • E Value
      0E0
    • BLAST Score
      943 bits
    • Similarity
      94.91%
    • Coverage
      99.81%
    • Alignment (schematic)

      SEQ ID NO 10
      99.81% cov
      XP_002753643
      81.04% cov
    • Alignment Length
      530 aa
Occurrence
245 times in PatSeqDB
Tools

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