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Search for Biological Sequences disclosed in Patents

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Data obtained from: EPO Sequence Listings
557 sequences found in this patent (in total)

Displaying 1 - 10 of 557 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
3,921
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:181943
      M59371
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      3,921 bp
    • E Value
      0E0
    • BLAST Score
      7,241.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      M59371
      100% cov
    • Alignment Length
      3,921 bp
    • CIGAR string
      3921M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332261855
      XM_003279934
    • Hit length
      3,958 bp
    • E Value
      0E0
    • BLAST Score
      6,689.7 bits
    • Similarity
      97.48%
    • Coverage
      99.95%
    • Alignment (schematic)

      SEQ ID NO 1
      99.95% cov
      XM_003279934
      99.01% cov
    • Alignment Length
      3,925 bp
    • CIGAR string
      2H12MN22MN43MD12MN230MN38MN28MNM2NMN10MN155MN23MN98MN86MN77MN8MN89MN121MN24MN20MN116MN41MN2MN26MN28MN21MN17MN112MN15MN20MN44MN23MN8MN2MN35MN44MN55MN30MN26MNMN135MN61MN48MN5MN2MN83MN9MN31MN36MN190MN71MN62MN21MN52MN146MN104MN53MN162MN37MN25MN11MN48MN11MN20MNMN2MN28MN33MN34MN4MD2MI2MN2MN32MN3MI11MN6MN61MN11MN5MIMD27MN7MN159MN12MNMN3MN52MI4MD3MNM2I7MN15MN17MN9MN14MD7MD63M mismatches: 87 - insertions: 6 - deletions: 6
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:100818624
      NM_001040678
    • Hit length
      3,840 bp
    • E Value
      0E0
    • BLAST Score
      6,333.3 bits
    • Similarity
      96.46%
    • Coverage
      97.81%
    • Alignment (schematic)

      SEQ ID NO 1
      97.81% cov
      NM_001040678
      100% cov
    • Alignment Length
      3,847 bp
    • CIGAR string
      86H35MDMNMI19MN25MN5MN4MN98MN56MN47MN5MNMNM2NMN4MN5MN8MN2MN20MN11MN47MN95MN132MN9MN3MN29MN176MN13M2N105M2N9MN14MN20MN38MN14MN17MN44MN2MN12MNMN14MN8MN29MN14MN23MN11MN17MN62MN65MN20MN2MD2MI29M3N39MDMNMNMI79MN21M2N18MN9MN17MN12MN6MN25MN54MN23MN23MN17MN14MN61MN33MN23MN32MN2MN5MN23MN17MN9MN36MN9MN119MN128MN11MN2MN20MN17MN66MN10MN14MN5MN20MN77MN32MN35MN8MN23MN2MN215MN63MN14MD28MN23MIM5I4MI9MN23MN18MN4MDMI4MN6MN5MN14MNMN8MN24MN47MNM2D20MN4MN2MN36MI10MN7MN17MN478M mismatches: 117 - insertions: 12 - deletions: 7
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:92918924
      DQ478608
    • Hit length
      3,901 bp
    • E Value
      0E0
    • BLAST Score
      6,240.9 bits
    • Similarity
      95.6%
    • Coverage
      99.11%
    • Alignment (schematic)

      SEQ ID NO 1
      99.11% cov
      DQ478608
      100% cov
    • Alignment Length
      3,906 bp
    • CIGAR string
      25H4MN9MN31MN13MN15MN2MN17M2N20MN25MN5MN4MN98MN56MN47MN5MNMNM2NMN4MN5MN8MN2MN20MN11MN47MN95MN132MN9MN3MN29MN38MN11MN26MN62MN35MN13M2N105M2N9MN14MN20MN38MN14MN17MN44MN2MN12MNMN14MN8MN29MN14MN23MN11MN17MN62MN65MN20MN35MN41MN2MN80MN21M2N18MN9MN17MN12MN32MN54MN23MN23MN17MN14MN61MN33MN23MN32MN2MN5MN23MN17MN46MN9MN119MN116MN11MN11MN2MN20MN17MN66MN10MN14MN5MN20MN77MN32MN35MN8MN23MN2MN215MN63MN14MD28MN23MIM5I4MI9MN23MN3MN14MN4MDMI4MN6MN20MNMN8MN22MNMN47MNM2D20MN4MN2MN24MN7MN3MI10MN7MN17MN6MN20MN15MN18MN24MN10MN121MDMI4MN21M3IM4I9MN12MNMN3MN35MN17MNMNMN4M2I2MN20MN15MNMN33MI53M10H mismatches: 147 - insertions: 20 - deletions: 5
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:157928983
      EU176326
      1 of 4 hits reported for synthetic construct.
    • Hit length
      2,971 bp
    • E Value
      0E0
    • BLAST Score
      5,378.6 bits
    • Similarity
      99.8%
    • Coverage
      74.73%
    • Alignment (schematic)

      SEQ ID NO 1
      74.73% cov
      EU176326
      98.62% cov
    • Alignment Length
      2,930 bp
    • CIGAR string
      112H281MNM2NMN10MN689MN1942M879H mismatches: 6 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149695471
      XM_001488739
    • Hit length
      2,928 bp
    • E Value
      0E0
    • BLAST Score
      3,980.7 bits
    • Similarity
      91.23%
    • Coverage
      74.75%
    • Alignment (schematic)

      SEQ ID NO 1
      74.75% cov
      XM_001488739
      100% cov
    • Alignment Length
      2,942 bp
    • CIGAR string
      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 mismatches: 233 - insertions: 11 - deletions: 14
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291412203
      XM_002722324
    • Hit length
      3,043 bp
    • E Value
      0E0
    • BLAST Score
      3,947.4 bits
    • Similarity
      90.98%
    • Coverage
      74.83%
    • Alignment (schematic)

      SEQ ID NO 1
      74.83% cov
      XM_002722324
      96.52% cov
    • Alignment Length
      2,948 bp
    • CIGAR string
      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 mismatches: 241 - insertions: 14 - deletions: 11
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335290572
      XM_003127639
    • Hit length
      3,419 bp
    • E Value
      0E0
    • BLAST Score
      3,945.6 bits
    • Similarity
      89.42%
    • Coverage
      80.26%
    • Alignment (schematic)

      SEQ ID NO 1
      80.26% cov
      XM_003127639
      91.72% cov
    • Alignment Length
      3,166 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73950853
      XM_544546
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      3,077 bp
    • E Value
      0E0
    • BLAST Score
      3,866.2 bits
    • Similarity
      89.44%
    • Coverage
      78.5%
    • Alignment (schematic)

      SEQ ID NO 1
      78.5% cov
      XM_544546
      99.81% cov
    • Alignment Length
      3,097 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297472355
      XM_002685747
    • Hit length
      3,803 bp
    • E Value
      0E0
    • BLAST Score
      3,818.1 bits
    • Similarity
      88.99%
    • Coverage
      79.04%
    • Alignment (schematic)

      SEQ ID NO 1
      79.04% cov
      XM_002685747
      81.51% cov
    • Alignment Length
      3,124 bp
Occurrence
76 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
3,949
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2739055
      AF025304
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      3,949 bp
    • E Value
      0E0
    • BLAST Score
      7,293.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AF025304
      100% cov
    • Alignment Length
      3,949 bp
    • CIGAR string
      3949M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168270927
      AB384401
      1 of 2 hits reported for synthetic construct.
    • Hit length
      2,999 bp
    • E Value
      0E0
    • BLAST Score
      5,458 bits
    • Similarity
      99.97%
    • Coverage
      74.91%
    • Alignment (schematic)

      SEQ ID NO 2
      74.91% cov
      AB384401
      98.63% cov
    • Alignment Length
      2,958 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332807921
      XM_513189
    • Hit length
      4,665 bp
    • E Value
      0E0
    • BLAST Score
      5,264.1 bits
    • Similarity
      99.52%
    • Coverage
      73.21%
    • Alignment (schematic)

      SEQ ID NO 2
      73.21% cov
      XM_513189
      62.04% cov
    • Alignment Length
      2,894 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297666084
      XM_002811320
    • Hit length
      3,152 bp
    • E Value
      0E0
    • BLAST Score
      5,136.7 bits
    • Similarity
      98.66%
    • Coverage
      73.36%
    • Alignment (schematic)

      SEQ ID NO 2
      73.36% cov
      XM_002811320
      92.01% cov
    • Alignment Length
      2,901 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296206989
      XM_002750407
      1 of 4 hits reported for Callithrix jacchus.
    • Hit length
      3,151 bp
    • E Value
      0E0
    • BLAST Score
      4,782.1 bits
    • Similarity
      96.45%
    • Coverage
      73.36%
    • Alignment (schematic)

      SEQ ID NO 2
      73.36% cov
      XM_002750407
      92.03% cov
    • Alignment Length
      2,900 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73950251
      XM_847885
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      3,081 bp
    • E Value
      0E0
    • BLAST Score
      4,287.2 bits
    • Similarity
      93.43%
    • Coverage
      73.21%
    • Alignment (schematic)

      SEQ ID NO 2
      73.21% cov
      XM_847885
      93.83% cov
    • Alignment Length
      2,891 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301768328
      XM_002919539
    • Hit length
      2,913 bp
    • E Value
      0E0
    • BLAST Score
      4,257.6 bits
    • Similarity
      93.21%
    • Coverage
      73.36%
    • Alignment (schematic)

      SEQ ID NO 2
      73.36% cov
      XM_002919539
      99.35% cov
    • Alignment Length
      2,900 bp
Occurrence
33 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
2,704
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:290542357
      NM_001753
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      2,723 bp
    • E Value
      0E0
    • BLAST Score
      4,994.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001753
      99.3% cov
    • Alignment Length
      2,704 bp
    • CIGAR string
      2704M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:209447025
      NM_001135818
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,733 bp
    • E Value
      0E0
    • BLAST Score
      4,759.9 bits
    • Similarity
      98.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001135818
      100% cov
    • Alignment Length
      2,734 bp
    • CIGAR string
      169MN8MD76MN267MN101MN343MN4IMIMIMN4M2I2M2IMIM2IMIM4IMI2MN2MIM3IMI2MNMI2MIMI3M2I165MN143MN200MN98MN298MN362MN11MI91MN322MN4M mismatches: 16 - insertions: 30 - deletions: 1
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:281182550
      NM_001168533
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      2,699 bp
    • E Value
      0E0
    • BLAST Score
      4,584.5 bits
    • Similarity
      97.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001168533
      100% cov
    • Alignment Length
      2,709 bp
    • CIGAR string
      49MN43MN41MN33MN15MN14MN47MN6MN14MN108MN140MN2MN11MN71MN5MN20MN210MI63MN7MD17MN49MN47MN35MN27M2D18MN10MN14M6D8MD17MN12MN24MN71MN31MN8MN24MN19MN80MN52MN15MN5MN24MN89MN16MN5MN7MN11MN35MN16MN4MN26MN115MN24MN15MN252MN37MN30MN26M3INMI27MN301MN16MN39MN4MN30MN4M mismatches: 58 - insertions: 5 - deletions: 10
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332224240
      XR_121407
    • Hit length
      2,705 bp
    • E Value
      0E0
    • BLAST Score
      4,488.5 bits
    • Similarity
      96.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XR_121407
      99.67% cov
    • Alignment Length
      2,709 bp
    • CIGAR string
      80MN12MN9MN6MN3MN11MN36MI6MN15MN42MN23MN2MN96MN153MN31MN11MN47MN14MN80MN143MN77MD17MN33MDNMD23MD77MN68M4D7MN2MD30MN96MN6MN24MN64MN19MN3MN45M2N7MN65MN41MN56MN15MN14MNMN5MN7M2N5MN3M2N32MN2MN16MN31MN82MN57MN15MN42MN97MN10MN33MN66MN21MN6MN19MN15MN30M3INMI27MN11MN7MN24MN26MN22M2D3M2D8MN5MN101MN172MN4MN3M mismatches: 72 - insertions: 5 - deletions: 13
  • Gorilla gorilla gorilla

    Gorilla gorilla gorilla

    • Public DB hit
      GI:113195729
      AC145495
    • Hit length
      216,794 bp
    • E Value
      0E0
    • BLAST Score
      4,001 bits
    • Similarity
      99.02%
    • Coverage
      82.58%
    • Alignment (schematic)

      SEQ ID NO 3
      82.58% cov
      AC145495
      1.03% cov
    • Alignment Length
      2,234 bp
    • CIGAR string
      471H49MN92MN323MN8MN207MND4MDMN287MN207MN50MN10MN48MN83MN31MN24MN134MN59MN73MN105MI188MN144MN85M mismatches: 19 - insertions: 1 - deletions: 2
Occurrence
115 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
1,483
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:332164663
      NM_001206747
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      3,121 bp
    • E Value
      0E0
    • BLAST Score
      2,734.2 bits
    • Similarity
      99.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001206747
      47.52% cov
    • Alignment Length
      1,483 bp
    • CIGAR string
      1205MN277M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:209447120
      NM_001135826
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      3,303 bp
    • E Value
      0E0
    • BLAST Score
      2,671.4 bits
    • Similarity
      99.13%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001135826
      45.02% cov
    • Alignment Length
      1,487 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:281182556
      NM_001168534
    • Hit length
      3,309 bp
    • E Value
      0E0
    • BLAST Score
      2,494.1 bits
    • Similarity
      96.98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001168534
      44.94% cov
    • Alignment Length
      1,488 bp
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:281183241
      NM_001168712
    • Hit length
      3,305 bp
    • E Value
      0E0
    • BLAST Score
      2,364.8 bits
    • Similarity
      95.5%
    • Coverage
      99.8%
    • Alignment (schematic)

      SEQ ID NO 4
      99.8% cov
      NM_001168712
      44.87% cov
    • Alignment Length
      1,490 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:274320234
      NM_001168619
    • Hit length
      3,296 bp
    • E Value
      0E0
    • BLAST Score
      2,329.7 bits
    • Similarity
      95.15%
    • Coverage
      99.8%
    • Alignment (schematic)

      SEQ ID NO 4
      99.8% cov
      NM_001168619
      44.72% cov
    • Alignment Length
      1,486 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332224241
      XM_003261227
    • Hit length
      2,698 bp
    • E Value
      0E0
    • BLAST Score
      1,831.2 bits
    • Similarity
      97.32%
    • Coverage
      72.62%
    • Alignment (schematic)

      SEQ ID NO 4
      72.62% cov
      XM_003261227
      40.03% cov
    • Alignment Length
      1,081 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
1,399
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4502100
      NM_000700
      1 of 15 hits reported for Homo sapiens.
    • Hit length
      1,399 bp
    • E Value
      0E0
    • BLAST Score
      2,584.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_000700
      100% cov
    • Alignment Length
      1,399 bp
    • CIGAR string
      1399M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:148727352
      NM_001098567
    • Hit length
      1,414 bp
    • E Value
      0E0
    • BLAST Score
      2,547.7 bits
    • Similarity
      99.57%
    • Coverage
      99.86%
    • Alignment (schematic)

      SEQ ID NO 5
      99.86% cov
      NM_001098567
      98.8% cov
    • Alignment Length
      1,397 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332236549
      XM_003267415
    • Hit length
      1,441 bp
    • E Value
      0E0
    • BLAST Score
      2,495.9 bits
    • Similarity
      98.93%
    • Coverage
      99.79%
    • Alignment (schematic)

      SEQ ID NO 5
      99.79% cov
      XM_003267415
      96.88% cov
    • Alignment Length
      1,397 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197102365
      NM_001131354
    • Hit length
      1,574 bp
    • E Value
      0E0
    • BLAST Score
      2,494.1 bits
    • Similarity
      98.92%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 5
      99.71% cov
      NM_001131354
      88.63% cov
    • Alignment Length
      1,395 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297271090
      XM_001098693
    • Hit length
      1,573 bp
    • E Value
      0E0
    • BLAST Score
      2,292.8 bits
    • Similarity
      97.54%
    • Coverage
      95.78%
    • Alignment (schematic)

      SEQ ID NO 5
      95.78% cov
      XM_001098693
      85.19% cov
    • Alignment Length
      1,341 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296189726
      XM_002742846
    • Hit length
      1,509 bp
    • E Value
      0E0
    • BLAST Score
      2,146.9 bits
    • Similarity
      95.86%
    • Coverage
      94.85%
    • Alignment (schematic)

      SEQ ID NO 5
      94.85% cov
      XM_002742846
      87.94% cov
    • Alignment Length
      1,327 bp
Occurrence
271 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
1,362
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:50845389
      NM_004039
      1 of 22 hits reported for Homo sapiens.
    • Hit length
      1,563 bp
    • E Value
      0E0
    • BLAST Score
      2,516.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_004039
      87.14% cov
    • Alignment Length
      1,362 bp
    • CIGAR string
      1362M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843940
      XM_001155637
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,628 bp
    • E Value
      0E0
    • BLAST Score
      2,449.8 bits
    • Similarity
      99.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001155637
      83.66% cov
    • Alignment Length
      1,362 bp
    • CIGAR string
      10MN15MN87MN131MN161MN110MN47MN65MN239MN188MN67MN26MN204M mismatches: 12 - insertions: 0 - deletions: 0
Occurrence
76 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
691
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:92444123
      BC014273
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      3,184 bp
    • E Value
      0E0
    • BLAST Score
      1,205.1 bits
    • Similarity
      98.54%
    • Coverage
      99.13%
    • Alignment (schematic)

      SEQ ID NO 7
      99.13% cov
      BC014273
      21.36% cov
    • Alignment Length
      685 bp
    • CIGAR string
      363MD4MD238MN10MN7MD15MD11MD19MN2MN2MN4M6H mismatches: 5 - insertions: 0 - deletions: 5
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332836084
      XM_001171467
    • Hit length
      3,983 bp
    • E Value
      0E0
    • BLAST Score
      1,173.7 bits
    • Similarity
      98.22%
    • Coverage
      97.54%
    • Alignment (schematic)

      SEQ ID NO 7
      97.54% cov
      XM_001171467
      16.8% cov
    • Alignment Length
      674 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297689242
      XM_002822019
    • Hit length
      4,969 bp
    • E Value
      0E0
    • BLAST Score
      1,140.5 bits
    • Similarity
      97.33%
    • Coverage
      97.54%
    • Alignment (schematic)

      SEQ ID NO 7
      97.54% cov
      XM_002822019
      13.44% cov
    • Alignment Length
      674 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332211012
      XM_003254558
    • Hit length
      1,851 bp
    • E Value
      0E0
    • BLAST Score
      1,105.4 bits
    • Similarity
      96.44%
    • Coverage
      97.54%
    • Alignment (schematic)

      SEQ ID NO 7
      97.54% cov
      XM_003254558
      36.03% cov
    • Alignment Length
      674 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297268383
      XM_001091788
    • Hit length
      1,967 bp
    • E Value
      0E0
    • BLAST Score
      1,066.6 bits
    • Similarity
      95.4%
    • Coverage
      97.54%
    • Alignment (schematic)

      SEQ ID NO 7
      97.54% cov
      XM_001091788
      33.86% cov
    • Alignment Length
      674 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296217582
      XM_002755060
    • Hit length
      1,802 bp
    • E Value
      0E0
    • BLAST Score
      1,005.7 bits
    • Similarity
      93.78%
    • Coverage
      97.54%
    • Alignment (schematic)

      SEQ ID NO 7
      97.54% cov
      XM_002755060
      36.96% cov
    • Alignment Length
      675 bp
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
878
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:17390291
      BC018130
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      2,876 bp
    • E Value
      0E0
    • BLAST Score
      1,109.1 bits
    • Similarity
      90.96%
    • Coverage
      94.08%
    • Alignment (schematic)

      SEQ ID NO 8
      94.08% cov
      BC018130
      29.07% cov
    • Alignment Length
      852 bp
    • CIGAR string
      18MN13MN61MN14MN25MN11MD24MD2MI16MN14MD30MD22MN6MN11MN23MD17MD7MD20MN21MN4MD100MD19MN3MN3MD24MD4MN6MN2MD33MNMN3MD19MN2MD20MI14MD8MNM2N2MI14MI2MND3MI9MI8MI4MI4MI21MN7MNMI3MI3MNIMN6MI5MNI4MN4MN2MN2MI3MN2M2NMI3MI3MNMI6MI2MI4MI2MI6MN2MI4MI4MI3MI3M52H mismatches: 35 - insertions: 26 - deletions: 16
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114599568
      XM_001145175
    • Hit length
      2,919 bp
    • E Value
      0E0
    • BLAST Score
      1,057.4 bits
    • Similarity
      90.31%
    • Coverage
      92.6%
    • Alignment (schematic)

      SEQ ID NO 8
      92.6% cov
      XM_001145175
      28.02% cov
    • Alignment Length
      836 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297675499
      XM_002815666
    • Hit length
      2,904 bp
    • E Value
      0E0
    • BLAST Score
      902.3 bits
    • Similarity
      89.92%
    • Coverage
      81.78%
    • Alignment (schematic)

      SEQ ID NO 8
      81.78% cov
      XM_002815666
      23.97% cov
    • Alignment Length
      724 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332224763
      XM_003261491
    • Hit length
      2,895 bp
    • E Value
      0E0
    • BLAST Score
      856.1 bits
    • Similarity
      86.28%
    • Coverage
      92.6%
    • Alignment (schematic)

      SEQ ID NO 8
      92.6% cov
      XM_003261491
      27.74% cov
    • Alignment Length
      838 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
2,153
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:339501
      J02931
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      2,141 bp
    • E Value
      0E0
    • BLAST Score
      3,941.9 bits
    • Similarity
      100%
    • Coverage
      99.12%
    • Alignment (schematic)

      SEQ ID NO 9
      99.12% cov
      J02931
      99.67% cov
    • Alignment Length
      2,134 bp
    • CIGAR string
      19H2134M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332809554
      XM_001156450
    • Hit length
      2,392 bp
    • E Value
      0E0
    • BLAST Score
      3,755.4 bits
    • Similarity
      98.15%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_001156450
      90.01% cov
    • Alignment Length
      2,160 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221926
      XM_003260067
    • Hit length
      2,394 bp
    • E Value
      0E0
    • BLAST Score
      3,509.8 bits
    • Similarity
      96.12%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003260067
      89.85% cov
    • Alignment Length
      2,165 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197098831
      NM_001132691
    • Hit length
      2,157 bp
    • E Value
      0E0
    • BLAST Score
      3,362 bits
    • Similarity
      95.01%
    • Coverage
      99.81%
    • Alignment (schematic)

      SEQ ID NO 9
      99.81% cov
      NM_001132691
      99.21% cov
    • Alignment Length
      2,166 bp
Occurrence
63 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
539
Type
DNA
Locations
Undetermined

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:37537705
      NM_197958
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      577 bp
    • E Value
      0E0
    • BLAST Score
      994.6 bits
    • Similarity
      100%
    • Coverage
      99.81%
    • Alignment (schematic)

      SEQ ID NO 10
      99.81% cov
      NM_197958
      93.24% cov
    • Alignment Length
      538 bp
    • CIGAR string
      538M1H mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332844189
      XM_003314740
    • Hit length
      579 bp
    • E Value
      0E0
    • BLAST Score
      963.2 bits
    • Similarity
      99.62%
    • Coverage
      97.77%
    • Alignment (schematic)

      SEQ ID NO 10
      97.77% cov
      XM_003314740
      91.02% cov
    • Alignment Length
      527 bp
    • CIGAR string
      345MN15MN165M12H mismatches: 2 - insertions: 0 - deletions: 0
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder

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