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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
12 sequences found in this patent (in total)

Displaying 1 - 10 of 12 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
567
Type
peptide
Locations
Claims, Summary

Declared organism:
Helicobacter pylori

Determined organism:
  • Helicobacter pylori 26695

    Helicobacter pylori 26695

    • Public DB hit
      GI:15645732
      NP_207909
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,154.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_207909
      100% cov
    • Alignment Length
      567 aa
    • CIGAR string
      567M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori HPAG1

    Helicobacter pylori HPAG1

    • Public DB hit
      GI:108563481
      YP_627797
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,147.1 bits
    • Similarity
      99.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_627797
      100% cov
    • Alignment Length
      567 aa
    • CIGAR string
      16MN4MN25MN284MN234M mismatches: 4 - insertions: 0 - deletions: 0
  • Helicobacter pylori P12

    Helicobacter pylori P12

    • Public DB hit
      GI:210135276
      YP_002301715
      1 of 2 hits reported for Helicobacter pylori P12.
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,146 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_002301715
      100% cov
    • Alignment Length
      567 aa
    • CIGAR string
      16MN4MN34MN210MN30MN268M mismatches: 5 - insertions: 0 - deletions: 0
  • Helicobacter pylori Lithuania75

    Helicobacter pylori Lithuania75

    • Public DB hit
      GI:317012895
      ADU83503
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,146 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ADU83503
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori PeCan4

    Helicobacter pylori PeCan4

    • Public DB hit
      GI:308183222
      YP_003927349
      1 of 2 hits reported for Helicobacter pylori PeCan4.
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,145.6 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_003927349
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori SJM180

    Helicobacter pylori SJM180

    • Public DB hit
      GI:308184858
      YP_003928991
      1 of 2 hits reported for Helicobacter pylori SJM180.
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,145.6 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_003928991
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori Gambia94/24

    Helicobacter pylori Gambia94/24

    • Public DB hit
      GI:317014504
      ADU81940
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,145.6 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ADU81940
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori NCTC 11637 = CCUG 17874

    Helicobacter pylori NCTC 11637 = CCUG 17874

    • Public DB hit
      GI:29371985
      AAO72530
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,144.8 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAO72530
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori F57

    Helicobacter pylori F57

    • Public DB hit
      GI:317182371
      BAJ60155
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,144.4 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BAJ60155
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori F30

    Helicobacter pylori F30

    • Public DB hit
      GI:317178580
      BAJ56368
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,144.4 bits
    • Similarity
      99.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BAJ56368
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori F16

    Helicobacter pylori F16

    • Public DB hit
      GI:317177868
      BAJ55657
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,143.6 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BAJ55657
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori India7

    Helicobacter pylori India7

    • Public DB hit
      GI:317009730
      ADU80310
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,143.6 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ADU80310
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori 51

    Helicobacter pylori 51

    • Public DB hit
      GI:261838447
      ACX98213
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,143.6 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ACX98213
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori B38

    Helicobacter pylori B38

    • Public DB hit
      GI:254779669
      YP_003057775
      1 of 2 hits reported for Helicobacter pylori B38.
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,143.3 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_003057775
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori 2017

    Helicobacter pylori 2017

    • Public DB hit
      GI:325997973
      ADZ50181
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,143.3 bits
    • Similarity
      99.47%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ADZ50181
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori B128

    Helicobacter pylori B128

    • Public DB hit
      GI:217032695
      ZP_03438181
      1 of 2 hits reported for Helicobacter pylori B128.
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,142.9 bits
    • Similarity
      99.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ZP_03438181
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori G27

    Helicobacter pylori G27

    • Public DB hit
      GI:208435015
      YP_002266681
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,142.9 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_002266681
      100% cov
    • Alignment Length
      567 aa
  • Helicobacter pylori J99

    Helicobacter pylori J99

    • Public DB hit
      GI:15612111
      NP_223763
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      1,142.9 bits
    • Similarity
      99.47%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_223763
      100% cov
    • Alignment Length
      567 aa
Occurrence
32 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
17
Type
peptide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Helicobacter pylori PeCan4

    Helicobacter pylori PeCan4

    • Public DB hit
      GI:308183222
      YP_003927349
      1 of 2 hits reported for Helicobacter pylori PeCan4.
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_003927349
      3% cov
    • Alignment Length
      17 aa
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori SJM180

    Helicobacter pylori SJM180

    • Public DB hit
      GI:308184858
      YP_003928991
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_003928991
      3% cov
    • Alignment Length
      17 aa
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori B38

    Helicobacter pylori B38

    • Public DB hit
      GI:254779669
      YP_003057775
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_003057775
      3% cov
    • Alignment Length
      17 aa
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori B128

    Helicobacter pylori B128

    • Public DB hit
      GI:217032695
      ZP_03438181
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_03438181
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori 98-10

    Helicobacter pylori 98-10

    • Public DB hit
      GI:217034662
      ZP_03440067
    • Hit length
      403 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_03440067
      4.22% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori P12

    Helicobacter pylori P12

    • Public DB hit
      GI:210135276
      YP_002301715
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_002301715
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori G27

    Helicobacter pylori G27

    • Public DB hit
      GI:208435015
      YP_002266681
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_002266681
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori Shi470

    Helicobacter pylori Shi470

    • Public DB hit
      GI:188527900
      YP_001910587
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_001910587
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori HPAG1

    Helicobacter pylori HPAG1

    • Public DB hit
      GI:108563481
      YP_627797
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_627797
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori 26695

    Helicobacter pylori 26695

    • Public DB hit
      GI:15645732
      NP_207909
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_207909
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori J99

    Helicobacter pylori J99

    • Public DB hit
      GI:15612111
      NP_223763
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_223763
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori 83

    Helicobacter pylori 83

    • Public DB hit
      GI:332673916
      AEE70733
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AEE70733
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori 2017

    Helicobacter pylori 2017

    • Public DB hit
      GI:325997973
      ADZ50181
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADZ50181
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori 2018

    Helicobacter pylori 2018

    • Public DB hit
      GI:325996385
      ADZ51790
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADZ51790
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori F57

    Helicobacter pylori F57

    • Public DB hit
      GI:317182371
      BAJ60155
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAJ60155
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori F32

    Helicobacter pylori F32

    • Public DB hit
      GI:317180850
      BAJ58636
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAJ58636
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori F30

    Helicobacter pylori F30

    • Public DB hit
      GI:317178580
      BAJ56368
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAJ56368
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori F16

    Helicobacter pylori F16

    • Public DB hit
      GI:317177868
      BAJ55657
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAJ55657
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori Gambia94/24

    Helicobacter pylori Gambia94/24

    • Public DB hit
      GI:317014504
      ADU81940
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADU81940
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori Lithuania75

    Helicobacter pylori Lithuania75

    • Public DB hit
      GI:317012895
      ADU83503
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADU83503
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori SouthAfrica7

    Helicobacter pylori SouthAfrica7

    • Public DB hit
      GI:317011315
      ADU85062
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADU85062
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori India7

    Helicobacter pylori India7

    • Public DB hit
      GI:317009730
      ADU80310
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADU80310
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori Sat464

    Helicobacter pylori Sat464

    • Public DB hit
      GI:308063902
      ADO05789
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADO05789
      3% cov
    • Alignment Length
      17 aa
  • Helicobacter pylori Cuz20

    Helicobacter pylori Cuz20

    • Public DB hit
      GI:308062394
      ADO04282
    • Hit length
      567 aa
    • E Value
      1.66E-1
    • BLAST Score
      39.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ADO04282
      3% cov
    • Alignment Length
      17 aa
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
21
Type
peptide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Helicobacter pylori 35A

    Helicobacter pylori 35A

    • Public DB hit
      GI:315587006
      ADU41387
    • Hit length
      567 aa
    • E Value
      6.77E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ADU41387
      3.7% cov
    • Alignment Length
      21 aa
    • CIGAR string
      MN19M mismatches: 1 - insertions: 0 - deletions: 0
  • Helicobacter pylori 98-10

    Helicobacter pylori 98-10

    • Public DB hit
      GI:217034662
      ZP_03440067
      1 of 2 hits reported for Helicobacter pylori 98-10.
    • Hit length
      403 aa
    • E Value
      6.89E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_03440067
      5.21% cov
    • Alignment Length
      21 aa
    • CIGAR string
      MN19M mismatches: 1 - insertions: 0 - deletions: 0
  • Helicobacter pylori SouthAfrica7

    Helicobacter pylori SouthAfrica7

    • Public DB hit
      GI:317011315
      ADU85062
    • Hit length
      567 aa
    • E Value
      6.89E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ADU85062
      3.7% cov
    • Alignment Length
      21 aa
    • CIGAR string
      MN19M mismatches: 1 - insertions: 0 - deletions: 0
  • Helicobacter pylori HPAG1

    Helicobacter pylori HPAG1

    • Public DB hit
      GI:108563481
      YP_627797
      1 of 2 hits reported for Helicobacter pylori HPAG1.
    • Hit length
      567 aa
    • E Value
      6.94E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_627797
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori F30

    Helicobacter pylori F30

    • Public DB hit
      GI:317178580
      BAJ56368
    • Hit length
      567 aa
    • E Value
      6.94E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BAJ56368
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori NCTC 11637 = CCUG 17874

    Helicobacter pylori NCTC 11637 = CCUG 17874

    • Public DB hit
      GI:29371985
      AAO72530
    • Hit length
      567 aa
    • E Value
      6.94E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAO72530
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori

    Helicobacter pylori

    • Public DB hit
      GI:11321265
      AAG34111
    • Hit length
      567 aa
    • E Value
      6.94E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAG34111
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori Lithuania75

    Helicobacter pylori Lithuania75

    • Public DB hit
      GI:317012895
      ADU83503
    • Hit length
      567 aa
    • E Value
      7E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ADU83503
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori 51

    Helicobacter pylori 51

    • Public DB hit
      GI:261838447
      ACX98213
    • Hit length
      567 aa
    • E Value
      7E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ACX98213
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori SJM180

    Helicobacter pylori SJM180

    • Public DB hit
      GI:308184858
      YP_003928991
      1 of 2 hits reported for Helicobacter pylori SJM180.
    • Hit length
      567 aa
    • E Value
      7.06E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_003928991
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori P12

    Helicobacter pylori P12

    • Public DB hit
      GI:210135276
      YP_002301715
      1 of 2 hits reported for Helicobacter pylori P12.
    • Hit length
      567 aa
    • E Value
      7.06E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_002301715
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori F57

    Helicobacter pylori F57

    • Public DB hit
      GI:317182371
      BAJ60155
    • Hit length
      567 aa
    • E Value
      7.06E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BAJ60155
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori PeCan4

    Helicobacter pylori PeCan4

    • Public DB hit
      GI:308183222
      YP_003927349
      1 of 2 hits reported for Helicobacter pylori PeCan4.
    • Hit length
      567 aa
    • E Value
      7.12E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_003927349
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori B38

    Helicobacter pylori B38

    • Public DB hit
      GI:254779669
      YP_003057775
      1 of 2 hits reported for Helicobacter pylori B38.
    • Hit length
      567 aa
    • E Value
      7.12E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_003057775
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori G27

    Helicobacter pylori G27

    • Public DB hit
      GI:208435015
      YP_002266681
      1 of 2 hits reported for Helicobacter pylori G27.
    • Hit length
      567 aa
    • E Value
      7.12E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_002266681
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori F16

    Helicobacter pylori F16

    • Public DB hit
      GI:317177868
      BAJ55657
    • Hit length
      567 aa
    • E Value
      7.12E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BAJ55657
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori B128

    Helicobacter pylori B128

    • Public DB hit
      GI:217032695
      ZP_03438181
    • Hit length
      567 aa
    • E Value
      7.18E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_03438181
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori India7

    Helicobacter pylori India7

    • Public DB hit
      GI:317009730
      ADU80310
    • Hit length
      567 aa
    • E Value
      7.18E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ADU80310
      3.7% cov
    • Alignment Length
      21 aa
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
29
Type
peptide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Helicobacter pylori 98-10

    Helicobacter pylori 98-10

    • Public DB hit
      GI:217034662
      ZP_03440067
    • Hit length
      403 aa
    • E Value
      1.94E-8
    • BLAST Score
      63.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_03440067
      7.2% cov
    • Alignment Length
      29 aa
    • CIGAR string
      29M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori 35A

    Helicobacter pylori 35A

    • Public DB hit
      GI:315587006
      ADU41387
    • Hit length
      567 aa
    • E Value
      2.18E-8
    • BLAST Score
      63.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ADU41387
      5.11% cov
    • Alignment Length
      29 aa
    • CIGAR string
      29M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori India7

    Helicobacter pylori India7

    • Public DB hit
      GI:317009730
      ADU80310
    • Hit length
      567 aa
    • E Value
      2.3E-8
    • BLAST Score
      63.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ADU80310
      5.11% cov
    • Alignment Length
      29 aa
    • CIGAR string
      29M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori 51

    Helicobacter pylori 51

    • Public DB hit
      GI:261838447
      ACX98213
    • Hit length
      567 aa
    • E Value
      2.3E-8
    • BLAST Score
      63.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ACX98213
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori HPAG1

    Helicobacter pylori HPAG1

    • Public DB hit
      GI:108563481
      YP_627797
    • Hit length
      567 aa
    • E Value
      2.31E-8
    • BLAST Score
      63.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_627797
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori B128

    Helicobacter pylori B128

    • Public DB hit
      GI:217032695
      ZP_03438181
      1 of 2 hits reported for Helicobacter pylori B128.
    • Hit length
      567 aa
    • E Value
      2.33E-8
    • BLAST Score
      63.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_03438181
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori F30

    Helicobacter pylori F30

    • Public DB hit
      GI:317178580
      BAJ56368
    • Hit length
      567 aa
    • E Value
      2.33E-8
    • BLAST Score
      63.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BAJ56368
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori F16

    Helicobacter pylori F16

    • Public DB hit
      GI:317177868
      BAJ55657
    • Hit length
      567 aa
    • E Value
      2.33E-8
    • BLAST Score
      63.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BAJ55657
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori NCTC 11637 = CCUG 17874

    Helicobacter pylori NCTC 11637 = CCUG 17874

    • Public DB hit
      GI:29371985
      AAO72530
    • Hit length
      567 aa
    • E Value
      2.33E-8
    • BLAST Score
      63.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAO72530
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori F32

    Helicobacter pylori F32

    • Public DB hit
      GI:317180850
      BAJ58636
    • Hit length
      567 aa
    • E Value
      2.35E-8
    • BLAST Score
      62.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BAJ58636
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori SJM180

    Helicobacter pylori SJM180

    • Public DB hit
      GI:308184858
      YP_003928991
      1 of 2 hits reported for Helicobacter pylori SJM180.
    • Hit length
      567 aa
    • E Value
      2.37E-8
    • BLAST Score
      62.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_003928991
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori P12

    Helicobacter pylori P12

    • Public DB hit
      GI:210135276
      YP_002301715
      1 of 2 hits reported for Helicobacter pylori P12.
    • Hit length
      567 aa
    • E Value
      2.37E-8
    • BLAST Score
      62.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_002301715
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori Shi470

    Helicobacter pylori Shi470

    • Public DB hit
      GI:188527900
      YP_001910587
      1 of 2 hits reported for Helicobacter pylori Shi470.
    • Hit length
      567 aa
    • E Value
      2.37E-8
    • BLAST Score
      62.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      YP_001910587
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori 83

    Helicobacter pylori 83

    • Public DB hit
      GI:332673916
      AEE70733
    • Hit length
      567 aa
    • E Value
      2.37E-8
    • BLAST Score
      62.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AEE70733
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori F57

    Helicobacter pylori F57

    • Public DB hit
      GI:317182371
      BAJ60155
    • Hit length
      567 aa
    • E Value
      2.37E-8
    • BLAST Score
      62.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BAJ60155
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori Lithuania75

    Helicobacter pylori Lithuania75

    • Public DB hit
      GI:317012895
      ADU83503
    • Hit length
      567 aa
    • E Value
      2.37E-8
    • BLAST Score
      62.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ADU83503
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori SouthAfrica7

    Helicobacter pylori SouthAfrica7

    • Public DB hit
      GI:317011315
      ADU85062
    • Hit length
      567 aa
    • E Value
      2.37E-8
    • BLAST Score
      62.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ADU85062
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori 52

    Helicobacter pylori 52

    • Public DB hit
      GI:261839849
      ACX99614
    • Hit length
      567 aa
    • E Value
      2.37E-8
    • BLAST Score
      62.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ACX99614
      5.11% cov
    • Alignment Length
      29 aa
  • Helicobacter pylori

    Helicobacter pylori

    • Public DB hit
      GI:11321265
      AAG34111
    • Hit length
      567 aa
    • E Value
      2.37E-8
    • BLAST Score
      62.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAG34111
      5.11% cov
    • Alignment Length
      29 aa
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
21
Type
peptide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Helicobacter pylori PeCan4

    Helicobacter pylori PeCan4

    • Public DB hit
      GI:308183222
      YP_003927349
      1 of 2 hits reported for Helicobacter pylori PeCan4.
    • Hit length
      567 aa
    • E Value
      1.18E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_003927349
      3.7% cov
    • Alignment Length
      21 aa
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori HPAG1

    Helicobacter pylori HPAG1

    • Public DB hit
      GI:108563481
      YP_627797
      1 of 2 hits reported for Helicobacter pylori HPAG1.
    • Hit length
      567 aa
    • E Value
      1.18E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_627797
      3.7% cov
    • Alignment Length
      21 aa
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori F32

    Helicobacter pylori F32

    • Public DB hit
      GI:317180850
      BAJ58636
    • Hit length
      567 aa
    • E Value
      1.18E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BAJ58636
      3.7% cov
    • Alignment Length
      21 aa
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori Lithuania75

    Helicobacter pylori Lithuania75

    • Public DB hit
      GI:317012895
      ADU83503
    • Hit length
      567 aa
    • E Value
      1.18E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ADU83503
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori B38

    Helicobacter pylori B38

    • Public DB hit
      GI:254779669
      YP_003057775
      1 of 2 hits reported for Helicobacter pylori B38.
    • Hit length
      567 aa
    • E Value
      1.19E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_003057775
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori P12

    Helicobacter pylori P12

    • Public DB hit
      GI:210135276
      YP_002301715
      1 of 2 hits reported for Helicobacter pylori P12.
    • Hit length
      567 aa
    • E Value
      1.19E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_002301715
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori G27

    Helicobacter pylori G27

    • Public DB hit
      GI:208435015
      YP_002266681
      1 of 2 hits reported for Helicobacter pylori G27.
    • Hit length
      567 aa
    • E Value
      1.19E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_002266681
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori B128

    Helicobacter pylori B128

    • Public DB hit
      GI:217032695
      ZP_03438181
    • Hit length
      567 aa
    • E Value
      1.2E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ZP_03438181
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori NCTC 11637 = CCUG 17874

    Helicobacter pylori NCTC 11637 = CCUG 17874

    • Public DB hit
      GI:29371985
      AAO72530
    • Hit length
      567 aa
    • E Value
      1.2E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAO72530
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori 26695

    Helicobacter pylori 26695

    • Public DB hit
      GI:15645732
      NP_207909
      1 of 2 hits reported for Helicobacter pylori 26695.
    • Hit length
      567 aa
    • E Value
      1.21E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_207909
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori J99

    Helicobacter pylori J99

    • Public DB hit
      GI:15612111
      NP_223763
      1 of 2 hits reported for Helicobacter pylori J99.
    • Hit length
      567 aa
    • E Value
      1.21E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_223763
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori 2017

    Helicobacter pylori 2017

    • Public DB hit
      GI:325997973
      ADZ50181
    • Hit length
      567 aa
    • E Value
      1.21E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ADZ50181
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori Gambia94/24

    Helicobacter pylori Gambia94/24

    • Public DB hit
      GI:317014504
      ADU81940
    • Hit length
      567 aa
    • E Value
      1.21E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ADU81940
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori SJM180

    Helicobacter pylori SJM180

    • Public DB hit
      GI:308184858
      YP_003928991
      1 of 2 hits reported for Helicobacter pylori SJM180.
    • Hit length
      567 aa
    • E Value
      1.22E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      YP_003928991
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori India7

    Helicobacter pylori India7

    • Public DB hit
      GI:317009730
      ADU80310
    • Hit length
      567 aa
    • E Value
      1.22E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ADU80310
      3.7% cov
    • Alignment Length
      21 aa
  • Helicobacter pylori 908

    Helicobacter pylori 908

    • Public DB hit
      GI:307637787
      ADN80237
    • Hit length
      567 aa
    • E Value
      1.22E-2
    • BLAST Score
      43.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ADN80237
      3.7% cov
    • Alignment Length
      21 aa
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
24
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Helicobacter pylori 83

    Helicobacter pylori 83

    • Public DB hit
      GI:332672788
      CP002605
    • Hit length
      1,617,426 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002605
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori F57

    Helicobacter pylori F57

    • Public DB hit
      GI:317181290
      AP011945
    • Hit length
      1,609,006 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AP011945
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori F32

    Helicobacter pylori F32

    • Public DB hit
      GI:317179796
      AP011943
    • Hit length
      1,578,824 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AP011943
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori F30

    Helicobacter pylori F30

    • Public DB hit
      GI:317178309
      AP011941
    • Hit length
      1,570,564 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AP011941
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori F16

    Helicobacter pylori F16

    • Public DB hit
      GI:317176808
      AP011940
    • Hit length
      1,575,399 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AP011940
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori India7

    Helicobacter pylori India7

    • Public DB hit
      GI:317008680
      CP002331
    • Hit length
      1,675,918 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002331
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori 35A

    Helicobacter pylori 35A

    • Public DB hit
      GI:315585794
      CP002096
    • Hit length
      1,566,655 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002096
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori Sat464

    Helicobacter pylori Sat464

    • Public DB hit
      GI:308062870
      CP002071
    • Hit length
      1,560,342 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002071
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori Cuz20

    Helicobacter pylori Cuz20

    • Public DB hit
      GI:308061305
      CP002076
    • Hit length
      1,635,449 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002076
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori v225d

    Helicobacter pylori v225d

    • Public DB hit
      GI:297379223
      CP001582
    • Hit length
      1,588,278 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001582
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori 52

    Helicobacter pylori 52

    • Public DB hit
      GI:261838873
      CP001680
    • Hit length
      1,568,826 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001680
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori 51

    Helicobacter pylori 51

    • Public DB hit
      GI:261837457
      CP000012
    • Hit length
      1,589,954 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000012
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori P12

    Helicobacter pylori P12

    • Public DB hit
      GI:210132169
      CP001217
    • Hit length
      1,673,813 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001217
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori Shi470

    Helicobacter pylori Shi470

    • Public DB hit
      GI:189491895
      CP001072
    • Hit length
      1,608,548 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001072
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori

    Helicobacter pylori

    • Public DB hit
      GI:11321264
      AF311344
    • Hit length
      2,275 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AF311344
      1.05% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori 26695

    Helicobacter pylori 26695

    • Public DB hit
      GI:6626253
      AE000511
    • Hit length
      1,667,867 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AE000511
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori Lithuania75

    Helicobacter pylori Lithuania75

    • Public DB hit
      GI:317011857
      CP002334
    • Hit length
      1,624,644 bp
    • E Value
      1.07E-2
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 6
      91.67% cov
      CP002334
      0% cov
    • Alignment Length
      22 bp
  • Helicobacter pylori HPAG1

    Helicobacter pylori HPAG1

    • Public DB hit
      GI:107836197
      CP000241
    • Hit length
      1,596,366 bp
    • E Value
      1.07E-2
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 6
      91.67% cov
      CP000241
      0% cov
    • Alignment Length
      22 bp
  • Helicobacter pylori 2017

    Helicobacter pylori 2017

    • Public DB hit
      GI:325996870
      CP002571
    • Hit length
      1,548,238 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002571
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori 2018

    Helicobacter pylori 2018

    • Public DB hit
      GI:325995266
      CP002572
    • Hit length
      1,562,832 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002572
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori SouthAfrica7

    Helicobacter pylori SouthAfrica7

    • Public DB hit
      GI:317010283
      CP002336
    • Hit length
      1,653,913 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002336
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori 908

    Helicobacter pylori 908

    • Public DB hit
      GI:307636682
      CP002184
    • Hit length
      1,549,666 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002184
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori NCTC 11637 = CCUG 17874

    Helicobacter pylori NCTC 11637 = CCUG 17874

    • Public DB hit
      GI:29371984
      AY225518
    • Hit length
      1,704 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AY225518
      1.41% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori J99

    Helicobacter pylori J99

    • Public DB hit
      GI:12057207
      AE001439
    • Hit length
      1,643,831 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AE001439
      0% cov
    • Alignment Length
      24 bp
  • Helicobacter pylori Gambia94/24

    Helicobacter pylori Gambia94/24

    • Public DB hit
      GI:317013424
      CP002332
    • Hit length
      1,709,911 bp
    • E Value
      2.62E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 6
      91.67% cov
      CP002332
      0% cov
    • Alignment Length
      22 bp
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
25
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Helicobacter pylori 83

    Helicobacter pylori 83

    • Public DB hit
      GI:332672788
      CP002605
    • Hit length
      1,617,426 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002605
      0% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori F57

    Helicobacter pylori F57

    • Public DB hit
      GI:317181290
      AP011945
    • Hit length
      1,609,006 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AP011945
      0% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori F32

    Helicobacter pylori F32

    • Public DB hit
      GI:317179796
      AP011943
    • Hit length
      1,578,824 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AP011943
      0% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Helicobacter pylori F30

    Helicobacter pylori F30

    • Public DB hit
      GI:317178309
      AP011941
    • Hit length
      1,570,564 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AP011941
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori F16

    Helicobacter pylori F16

    • Public DB hit
      GI:317176808
      AP011940
    • Hit length
      1,575,399 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AP011940
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori 35A

    Helicobacter pylori 35A

    • Public DB hit
      GI:315585794
      CP002096
    • Hit length
      1,566,655 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002096
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori PeCan4

    Helicobacter pylori PeCan4

    • Public DB hit
      GI:308064373
      CP002074
    • Hit length
      1,629,557 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002074
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori Sat464

    Helicobacter pylori Sat464

    • Public DB hit
      GI:308062870
      CP002071
    • Hit length
      1,560,342 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002071
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori Cuz20

    Helicobacter pylori Cuz20

    • Public DB hit
      GI:308061305
      CP002076
    • Hit length
      1,635,449 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002076
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori v225d

    Helicobacter pylori v225d

    • Public DB hit
      GI:297379223
      CP001582
    • Hit length
      1,588,278 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP001582
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori 52

    Helicobacter pylori 52

    • Public DB hit
      GI:261838873
      CP001680
    • Hit length
      1,568,826 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP001680
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori 51

    Helicobacter pylori 51

    • Public DB hit
      GI:261837457
      CP000012
    • Hit length
      1,589,954 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP000012
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori B38

    Helicobacter pylori B38

    • Public DB hit
      GI:254000649
      FM991728
    • Hit length
      1,576,758 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      FM991728
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori HPAG1

    Helicobacter pylori HPAG1

    • Public DB hit
      GI:107836197
      CP000241
    • Hit length
      1,596,366 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP000241
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori NCTC 11637 = CCUG 17874

    Helicobacter pylori NCTC 11637 = CCUG 17874

    • Public DB hit
      GI:29371984
      AY225518
    • Hit length
      1,704 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AY225518
      1.47% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori

    Helicobacter pylori

    • Public DB hit
      GI:11321264
      AF311344
    • Hit length
      2,275 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AF311344
      1.1% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori 26695

    Helicobacter pylori 26695

    • Public DB hit
      GI:6626253
      AE000511
    • Hit length
      1,667,867 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AE000511
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori 2017

    Helicobacter pylori 2017

    • Public DB hit
      GI:325996870
      CP002571
    • Hit length
      1,548,238 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002571
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori 2018

    Helicobacter pylori 2018

    • Public DB hit
      GI:325995266
      CP002572
    • Hit length
      1,562,832 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002572
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori Lithuania75

    Helicobacter pylori Lithuania75

    • Public DB hit
      GI:317011857
      CP002334
    • Hit length
      1,624,644 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002334
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori India7

    Helicobacter pylori India7

    • Public DB hit
      GI:317008680
      CP002331
    • Hit length
      1,675,918 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002331
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori SJM180

    Helicobacter pylori SJM180

    • Public DB hit
      GI:308059716
      CP002073
    • Hit length
      1,658,051 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002073
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori 908

    Helicobacter pylori 908

    • Public DB hit
      GI:307636682
      CP002184
    • Hit length
      1,549,666 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002184
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori B8

    Helicobacter pylori B8

    • Public DB hit
      GI:298354685
      FN598874
    • Hit length
      1,673,997 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      FN598874
      0% cov
    • Alignment Length
      25 bp
  • Helicobacter pylori P12

    Helicobacter pylori P12

    • Public DB hit
      GI:210132169
      CP001217
    • Hit length
      1,673,813 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP001217
      0% cov
    • Alignment Length
      25 bp
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
25
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
25
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
41
Type
nucleotide
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Helicobacter pylori F32

    Helicobacter pylori F32

    • Public DB hit
      GI:317179796
      AP011943
    • Hit length
      1,578,824 bp
    • E Value
      3E-6
    • BLAST Score
      58 bits
    • Similarity
      92.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AP011943
      0% cov
    • Alignment Length
      41 bp
    • CIGAR string
      17M2NMN20M mismatches: 3 - insertions: 0 - deletions: 0
  • Helicobacter pylori Lithuania75

    Helicobacter pylori Lithuania75

    • Public DB hit
      GI:317011857
      CP002334
    • Hit length
      1,624,644 bp
    • E Value
      3E-6
    • BLAST Score
      58 bits
    • Similarity
      92.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002334
      0% cov
    • Alignment Length
      41 bp
    • CIGAR string
      17M2NMN20M mismatches: 3 - insertions: 0 - deletions: 0
  • Helicobacter pylori India7

    Helicobacter pylori India7

    • Public DB hit
      GI:317008680
      CP002331
    • Hit length
      1,675,918 bp
    • E Value
      3E-6
    • BLAST Score
      58 bits
    • Similarity
      92.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002331
      0% cov
    • Alignment Length
      41 bp
    • CIGAR string
      17M2NMN20M mismatches: 3 - insertions: 0 - deletions: 0
  • Helicobacter pylori PeCan4

    Helicobacter pylori PeCan4

    • Public DB hit
      GI:308064373
      CP002074
    • Hit length
      1,629,557 bp
    • E Value
      3E-6
    • BLAST Score
      58 bits
    • Similarity
      92.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002074
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori Sat464

    Helicobacter pylori Sat464

    • Public DB hit
      GI:308062870
      CP002071
    • Hit length
      1,560,342 bp
    • E Value
      3E-6
    • BLAST Score
      58 bits
    • Similarity
      92.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002071
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori B8

    Helicobacter pylori B8

    • Public DB hit
      GI:298354685
      FN598874
    • Hit length
      1,673,997 bp
    • E Value
      3E-6
    • BLAST Score
      58 bits
    • Similarity
      92.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      FN598874
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori v225d

    Helicobacter pylori v225d

    • Public DB hit
      GI:297379223
      CP001582
    • Hit length
      1,588,278 bp
    • E Value
      3E-6
    • BLAST Score
      58 bits
    • Similarity
      92.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001582
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori G27

    Helicobacter pylori G27

    • Public DB hit
      GI:208431905
      CP001173
    • Hit length
      1,652,982 bp
    • E Value
      3E-6
    • BLAST Score
      58 bits
    • Similarity
      92.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001173
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori J99

    Helicobacter pylori J99

    • Public DB hit
      GI:12057207
      AE001439
    • Hit length
      1,643,831 bp
    • E Value
      3E-6
    • BLAST Score
      58 bits
    • Similarity
      92.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AE001439
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori 26695

    Helicobacter pylori 26695

    • Public DB hit
      GI:6626253
      AE000511
    • Hit length
      1,667,867 bp
    • E Value
      3E-6
    • BLAST Score
      58 bits
    • Similarity
      92.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AE000511
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori 83

    Helicobacter pylori 83

    • Public DB hit
      GI:332672788
      CP002605
    • Hit length
      1,617,426 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      90.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002605
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori F57

    Helicobacter pylori F57

    • Public DB hit
      GI:317181290
      AP011945
    • Hit length
      1,609,006 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      91.89%
    • Coverage
      90.24%
    • Alignment (schematic)

      SEQ ID NO 10
      90.24% cov
      AP011945
      0% cov
    • Alignment Length
      37 bp
  • Helicobacter pylori F30

    Helicobacter pylori F30

    • Public DB hit
      GI:317178309
      AP011941
    • Hit length
      1,570,564 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      91.89%
    • Coverage
      90.24%
    • Alignment (schematic)

      SEQ ID NO 10
      90.24% cov
      AP011941
      0% cov
    • Alignment Length
      37 bp
  • Helicobacter pylori F16

    Helicobacter pylori F16

    • Public DB hit
      GI:317176808
      AP011940
    • Hit length
      1,575,399 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      90.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AP011940
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori SouthAfrica7

    Helicobacter pylori SouthAfrica7

    • Public DB hit
      GI:317010283
      CP002336
    • Hit length
      1,653,913 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      90.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002336
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori 35A

    Helicobacter pylori 35A

    • Public DB hit
      GI:315585794
      CP002096
    • Hit length
      1,566,655 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      90.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002096
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori Cuz20

    Helicobacter pylori Cuz20

    • Public DB hit
      GI:308061305
      CP002076
    • Hit length
      1,635,449 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      91.89%
    • Coverage
      90.24%
    • Alignment (schematic)

      SEQ ID NO 10
      90.24% cov
      CP002076
      0% cov
    • Alignment Length
      37 bp
  • Helicobacter pylori 52

    Helicobacter pylori 52

    • Public DB hit
      GI:261838873
      CP001680
    • Hit length
      1,568,826 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      90.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001680
      0% cov
    • Alignment Length
      41 bp
  • Helicobacter pylori 51

    Helicobacter pylori 51

    • Public DB hit
      GI:261837457
      CP000012
    • Hit length
      1,589,954 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      91.89%
    • Coverage
      90.24%
    • Alignment (schematic)

      SEQ ID NO 10
      90.24% cov
      CP000012
      0% cov
    • Alignment Length
      37 bp
  • Helicobacter pylori B38

    Helicobacter pylori B38

    • Public DB hit
      GI:254000649
      FM991728
    • Hit length
      1,576,758 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      91.89%
    • Coverage
      90.24%
    • Alignment (schematic)

      SEQ ID NO 10
      90.24% cov
      FM991728
      0% cov
    • Alignment Length
      37 bp
  • Helicobacter pylori P12

    Helicobacter pylori P12

    • Public DB hit
      GI:210132169
      CP001217
    • Hit length
      1,673,813 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      91.89%
    • Coverage
      90.24%
    • Alignment (schematic)

      SEQ ID NO 10
      90.24% cov
      CP001217
      0% cov
    • Alignment Length
      37 bp
  • Helicobacter pylori Shi470

    Helicobacter pylori Shi470

    • Public DB hit
      GI:189491895
      CP001072
    • Hit length
      1,608,548 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      91.89%
    • Coverage
      90.24%
    • Alignment (schematic)

      SEQ ID NO 10
      90.24% cov
      CP001072
      0% cov
    • Alignment Length
      37 bp
  • Helicobacter pylori HPAG1

    Helicobacter pylori HPAG1

    • Public DB hit
      GI:107836197
      CP000241
    • Hit length
      1,596,366 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      91.89%
    • Coverage
      90.24%
    • Alignment (schematic)

      SEQ ID NO 10
      90.24% cov
      CP000241
      0% cov
    • Alignment Length
      37 bp
  • Helicobacter pylori NCTC 11637 = CCUG 17874

    Helicobacter pylori NCTC 11637 = CCUG 17874

    • Public DB hit
      GI:29371984
      AY225518
    • Hit length
      1,704 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      91.89%
    • Coverage
      90.24%
    • Alignment (schematic)

      SEQ ID NO 10
      90.24% cov
      AY225518
      2.17% cov
    • Alignment Length
      37 bp
  • Helicobacter pylori

    Helicobacter pylori

    • Public DB hit
      GI:11321264
      AF311344
    • Hit length
      2,275 bp
    • E Value
      7.31E-4
    • BLAST Score
      50.1 bits
    • Similarity
      91.89%
    • Coverage
      90.24%
    • Alignment (schematic)

      SEQ ID NO 10
      90.24% cov
      AF311344
      1.63% cov
    • Alignment Length
      37 bp
Occurrence
10 times in PatSeqDB
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