Bovine Beta -mannosidase Gene And Methods Of Use

  • Published: Feb 25, 1997
  • Earliest Priority: Sep 15 1994
  • Family: 2
  • Cited Works: 56
  • Cited by: 2
  • Cites: 1
  • Sequences: 28
  • Additional Info: Cited Works Full text
Data obtained from: EMBL-EBI Pat DDBJ Pat NCBI GenBank USPTO Fulltext
28 sequences found in this patent (in total)

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Download sequences in fasta format: 13 peptides 15 DNAs

Displaying 1 - 10 of 28 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
3,852
Sequence Type
DNA
Locations
Claims, Detailed Description
Declared organism
Not specified
Determined organism
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:31342139
      NM_174387
      1 of 3 hits reported for Bos taurus.
    • Hit length
      3,840 bp
    • E Value
      0E0
    • BLAST Score
      7,092.3 bits
    • Similarity
      100%
    • Coverage
      99.69%
    • Alignment (schematic)

      SEQ ID NO 1
      99.69% cov
      NM_174387
      100% cov
    • Alignment Length
      3,840 bp
    • CIGAR string
      3840M12H mismatches: 0 - insertions: 0 - deletions: 0
  • Capra hircus

    Capra hircus

    • Public DB hit
      GI:1621035
      U46067
    • Hit length
      2,959 bp
    • E Value
      0E0
    • BLAST Score
      4,817.2 bits
    • Similarity
      96.18%
    • Coverage
      76.43%
    • Alignment (schematic)

      SEQ ID NO 1
      76.43% cov
      U46067
      99.73% cov
    • Alignment Length
      2,955 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335294009
      XM_003129294
    • Hit length
      3,078 bp
    • E Value
      0E0
    • BLAST Score
      2,870.8 bits
    • Similarity
      85.99%
    • Coverage
      70.28%
    • Alignment (schematic)

      SEQ ID NO 1
      70.28% cov
      XM_003129294
      87.88% cov
    • Alignment Length
      2,741 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301762237
      XM_002916498
    • Hit length
      2,640 bp
    • E Value
      0E0
    • BLAST Score
      2,416.5 bits
    • Similarity
      83.59%
    • Coverage
      67.99%
    • Alignment (schematic)

      SEQ ID NO 1
      67.99% cov
      XM_002916498
      99.2% cov
    • Alignment Length
      2,663 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332216770
      XM_003257477
    • Hit length
      3,394 bp
    • E Value
      0E0
    • BLAST Score
      2,331.6 bits
    • Similarity
      82.87%
    • Coverage
      69.06%
    • Alignment (schematic)

      SEQ ID NO 1
      69.06% cov
      XM_003257477
      78.4% cov
    • Alignment Length
      2,721 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097913
      NM_001131631
    • Hit length
      3,320 bp
    • E Value
      0E0
    • BLAST Score
      2,315 bits
    • Similarity
      82.74%
    • Coverage
      69.06%
    • Alignment (schematic)

      SEQ ID NO 1
      69.06% cov
      NM_001131631
      80.15% cov
    • Alignment Length
      2,718 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74002294
      XM_545005
    • Hit length
      2,658 bp
    • E Value
      0E0
    • BLAST Score
      2,305.7 bits
    • Similarity
      82.8%
    • Coverage
      68.51%
    • Alignment (schematic)

      SEQ ID NO 1
      68.51% cov
      XM_545005
      99.17% cov
    • Alignment Length
      2,692 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16041730
      BC015743
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      3,309 bp
    • E Value
      0E0
    • BLAST Score
      2,298.4 bits
    • Similarity
      82.66%
    • Coverage
      69.06%
    • Alignment (schematic)

      SEQ ID NO 1
      69.06% cov
      BC015743
      80.42% cov
    • Alignment Length
      2,722 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296195884
      XM_002745542
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,865 bp
    • E Value
      0E0
    • BLAST Score
      2,287.3 bits
    • Similarity
      82.56%
    • Coverage
      69.06%
    • Alignment (schematic)

      SEQ ID NO 1
      69.06% cov
      XM_002745542
      92.88% cov
    • Alignment Length
      2,718 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819888
      XM_001169005
    • Hit length
      3,394 bp
    • E Value
      0E0
    • BLAST Score
      2,265.1 bits
    • Similarity
      82.44%
    • Coverage
      69.06%
    • Alignment (schematic)

      SEQ ID NO 1
      69.06% cov
      XM_001169005
      78.4% cov
    • Alignment Length
      2,722 bp
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
2
Length
879
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Not specified
Determined organism
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:27805995
      NP_776812
      1 of 3 hits reported for Bos taurus.
    • Hit length
      879 aa
    • E Value
      0E0
    • BLAST Score
      1,841.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_776812
      100% cov
    • Alignment Length
      879 aa
    • CIGAR string
      879M mismatches: 0 - insertions: 0 - deletions: 0
  • Capra hircus

    Capra hircus

    • Public DB hit
      GI:3024109
      Q95327
    • Hit length
      879 aa
    • E Value
      0E0
    • BLAST Score
      1,751.1 bits
    • Similarity
      97.93%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 2
      98.98% cov
      Q95327
      98.98% cov
    • Alignment Length
      870 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335294010
      XP_003129342
    • Hit length
      878 aa
    • E Value
      0E0
    • BLAST Score
      1,445.3 bits
    • Similarity
      87.33%
    • Coverage
      98.75%
    • Alignment (schematic)

      SEQ ID NO 2
      98.75% cov
      XP_003129342
      98.75% cov
    • Alignment Length
      868 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281337532
      EFB13116
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      878 aa
    • E Value
      0E0
    • BLAST Score
      1,443.7 bits
    • Similarity
      87.08%
    • Coverage
      98.63%
    • Alignment (schematic)

      SEQ ID NO 2
      98.63% cov
      EFB13116
      98.75% cov
    • Alignment Length
      867 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74002295
      XP_545005
    • Hit length
      885 aa
    • E Value
      0E0
    • BLAST Score
      1,406 bits
    • Similarity
      85.48%
    • Coverage
      98.75%
    • Alignment (schematic)

      SEQ ID NO 2
      98.75% cov
      XP_545005
      98.08% cov
    • Alignment Length
      868 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097914
      NP_001125103
    • Hit length
      879 aa
    • E Value
      0E0
    • BLAST Score
      1,405.2 bits
    • Similarity
      85.25%
    • Coverage
      98.75%
    • Alignment (schematic)

      SEQ ID NO 2
      98.75% cov
      NP_001125103
      98.75% cov
    • Alignment Length
      868 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16041731
      AAH15743
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      879 aa
    • E Value
      0E0
    • BLAST Score
      1,404 bits
    • Similarity
      85.14%
    • Coverage
      98.75%
    • Alignment (schematic)

      SEQ ID NO 2
      98.75% cov
      AAH15743
      98.75% cov
    • Alignment Length
      868 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296195885
      XP_002745588
    • Hit length
      879 aa
    • E Value
      0E0
    • BLAST Score
      1,403.3 bits
    • Similarity
      85.14%
    • Coverage
      98.75%
    • Alignment (schematic)

      SEQ ID NO 2
      98.75% cov
      XP_002745588
      98.75% cov
    • Alignment Length
      868 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332216771
      XP_003257525
    • Hit length
      887 aa
    • E Value
      0E0
    • BLAST Score
      1,402.9 bits
    • Similarity
      85.14%
    • Coverage
      98.75%
    • Alignment (schematic)

      SEQ ID NO 2
      98.75% cov
      XP_003257525
      97.86% cov
    • Alignment Length
      868 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114595438
      XP_001169005
    • Hit length
      879 aa
    • E Value
      0E0
    • BLAST Score
      1,401 bits
    • Similarity
      85.02%
    • Coverage
      98.75%
    • Alignment (schematic)

      SEQ ID NO 2
      98.75% cov
      XP_001169005
      98.75% cov
    • Alignment Length
      868 aa
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
3
Length
20
Sequence Type
DNA
Locations
Claims, Detailed Description
Declared organism
Not specified
Determined organism
  • Bartonella schoenbuchensis R1

    Bartonella schoenbuchensis R1

    • Public DB hit
      GI:319408070
      FN645507
    • Hit length
      462,753 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FN645507
      0% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:146762511
      EF555202
    • Hit length
      187 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EF555202
      10.7% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
4
Length
20
Sequence Type
DNA
Locations
Claims, Detailed Description
Declared organism
Not specified
Determined organism
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:146762511
      EF555202
    • Hit length
      187 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EF555202
      10.7% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
5
Length
17
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
6
Length
17
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
7
Length
17
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
8
Length
17
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
9
Length
44
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
10
Length
36
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Not specified
Determined organism
Occurrence
2 times in PatSeqDB
Tools

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