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Search for Biological Sequences disclosed in Patents

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Data obtained from: EPO Sequence Listings
100 sequences found in this patent (in total)

Displaying 1 - 10 of 100 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,629
Type
DNA
Locations
Undetermined

Declared organism:
Staphylococcus aureus

Determined organism:
  • Staphylococcus aureus subsp. aureus T0131

    Staphylococcus aureus subsp. aureus T0131

    • Public DB hit
      GI:329312723
      CP002643
    • Hit length
      2,913,900 bp
    • E Value
      0E0
    • BLAST Score
      3,005.6 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002643
      0.06% cov
    • Alignment Length
      1,629 bp
    • CIGAR string
      1557MN71M mismatches: 1 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus str. JKD6008

    Staphylococcus aureus subsp. aureus str. JKD6008

    • Public DB hit
      GI:302749911
      CP002120
    • Hit length
      2,924,344 bp
    • E Value
      0E0
    • BLAST Score
      3,005.6 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002120
      0.06% cov
    • Alignment Length
      1,629 bp
    • CIGAR string
      1557MN71M mismatches: 1 - insertions: 0 - deletions: 0
  • Staphylococcus aureus

    Staphylococcus aureus

    • Public DB hit
      GI:295443899
      AB539727
      1 of 12 hits reported for Staphylococcus aureus.
    • Hit length
      118,679 bp
    • E Value
      0E0
    • BLAST Score
      3,005.6 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AB539727
      1.37% cov
    • Alignment Length
      1,629 bp
    • CIGAR string
      1557MN71M mismatches: 1 - insertions: 0 - deletions: 0
  • Staphylococcus pseudintermedius

    Staphylococcus pseudintermedius

    • Public DB hit
      GI:169403129
      AM904732
      1 of 2 hits reported for Staphylococcus pseudintermedius.
    • Hit length
      25,254 bp
    • E Value
      0E0
    • BLAST Score
      3,005.6 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AM904732
      6.45% cov
    • Alignment Length
      1,629 bp
  • Staphylococcus aureus subsp. aureus TW20

    Staphylococcus aureus subsp. aureus TW20

    • Public DB hit
      GI:269939526
      FN433596
    • Hit length
      3,043,210 bp
    • E Value
      0E0
    • BLAST Score
      3,000.1 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      FN433596
      0.05% cov
    • Alignment Length
      1,629 bp
  • Staphylococcus hominis

    Staphylococcus hominis

    • Public DB hit
      GI:336039559
      HQ848705
    • Hit length
      1,320 bp
    • E Value
      0E0
    • BLAST Score
      2,438.7 bits
    • Similarity
      100%
    • Coverage
      81.03%
    • Alignment (schematic)

      SEQ ID NO 1
      81.03% cov
      HQ848705
      100% cov
    • Alignment Length
      1,320 bp
  • Staphylococcus cohnii

    Staphylococcus cohnii

    • Public DB hit
      GI:322366567
      GU370073
    • Hit length
      51,384 bp
    • E Value
      0E0
    • BLAST Score
      2,052.7 bits
    • Similarity
      89.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      GU370073
      3.17% cov
    • Alignment Length
      1,641 bp
  • Staphylococcus sciuri

    Staphylococcus sciuri

    • Public DB hit
      GI:317106579
      AB587080
    • Hit length
      3,045 bp
    • E Value
      0E0
    • BLAST Score
      2,017.7 bits
    • Similarity
      89.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AB587080
      53.46% cov
    • Alignment Length
      1,640 bp
  • Staphylococcus aureus subsp. aureus MSSA476

    Staphylococcus aureus subsp. aureus MSSA476

    • Public DB hit
      GI:49243355
      BX571857
    • Hit length
      2,799,802 bp
    • E Value
      0E0
    • BLAST Score
      1,493.2 bits
    • Similarity
      84.15%
    • Coverage
      95.58%
    • Alignment (schematic)

      SEQ ID NO 1
      95.58% cov
      BX571857
      0.06% cov
    • Alignment Length
      1,577 bp
  • Staphylococcus aureus 04-02981

    Staphylococcus aureus 04-02981

    • Public DB hit
      GI:311222926
      CP001844
    • Hit length
      2,821,452 bp
    • E Value
      0E0
    • BLAST Score
      1,349.2 bits
    • Similarity
      81.97%
    • Coverage
      99.45%
    • Alignment (schematic)

      SEQ ID NO 1
      99.45% cov
      CP001844
      0.06% cov
    • Alignment Length
      1,647 bp
  • Staphylococcus aureus subsp. aureus Mu3

    Staphylococcus aureus subsp. aureus Mu3

    • Public DB hit
      GI:156720466
      AP009324
    • Hit length
      2,880,168 bp
    • E Value
      0E0
    • BLAST Score
      1,349.2 bits
    • Similarity
      81.97%
    • Coverage
      99.45%
    • Alignment (schematic)

      SEQ ID NO 1
      99.45% cov
      AP009324
      0.06% cov
    • Alignment Length
      1,647 bp
  • Staphylococcus aureus subsp. aureus Mu50

    Staphylococcus aureus subsp. aureus Mu50

    • Public DB hit
      GI:47208328
      BA000017
    • Hit length
      2,878,529 bp
    • E Value
      0E0
    • BLAST Score
      1,349.2 bits
    • Similarity
      81.97%
    • Coverage
      99.45%
    • Alignment (schematic)

      SEQ ID NO 1
      99.45% cov
      BA000017
      0.06% cov
    • Alignment Length
      1,647 bp
  • Staphylococcus aureus subsp. aureus N315

    Staphylococcus aureus subsp. aureus N315

    • Public DB hit
      GI:47118324
      BA000018
    • Hit length
      2,814,816 bp
    • E Value
      0E0
    • BLAST Score
      1,349.2 bits
    • Similarity
      81.97%
    • Coverage
      99.45%
    • Alignment (schematic)

      SEQ ID NO 1
      99.45% cov
      BA000018
      0.06% cov
    • Alignment Length
      1,647 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
477
Type
DNA
Locations
Undetermined

Declared organism:
Staphylococcus aureus

Determined organism:
  • Staphylococcus aureus

    Staphylococcus aureus

    • Public DB hit
      GI:260066144
      GQ900442
      1 of 12 hits reported for Staphylococcus aureus.
    • Hit length
      1,290 bp
    • E Value
      0E0
    • BLAST Score
      882 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      GQ900442
      36.98% cov
    • Alignment Length
      477 bp
    • CIGAR string
      477M mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus haemolyticus JCSC1435

    Staphylococcus haemolyticus JCSC1435

    • Public DB hit
      GI:68448408
      AP006718
    • Hit length
      2,366 bp
    • E Value
      1.42E-149
    • BLAST Score
      538.5 bits
    • Similarity
      87.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AP006718
      20.16% cov
    • Alignment Length
      482 bp
  • Staphylococcus aureus subsp. aureus USA300_FPR3757

    Staphylococcus aureus subsp. aureus USA300_FPR3757

    • Public DB hit
      GI:87125821
      CP000258
    • Hit length
      37,136 bp
    • E Value
      1.42E-149
    • BLAST Score
      538.5 bits
    • Similarity
      87.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP000258
      1.28% cov
    • Alignment Length
      482 bp
  • Staphylococcus lentus

    Staphylococcus lentus

    • Public DB hit
      GI:60416743
      AJ888003
    • Hit length
      6,913 bp
    • E Value
      1.42E-149
    • BLAST Score
      538.5 bits
    • Similarity
      87.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AJ888003
      6.9% cov
    • Alignment Length
      482 bp
  • Staphylococcus simulans

    Staphylococcus simulans

    • Public DB hit
      GI:2407670
      AF019140
    • Hit length
      2,526 bp
    • E Value
      1.42E-149
    • BLAST Score
      538.5 bits
    • Similarity
      87.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AF019140
      18.88% cov
    • Alignment Length
      482 bp
  • Staphylococcus chromogenes

    Staphylococcus chromogenes

    • Public DB hit
      GI:2317795
      U82607
    • Hit length
      2,410 bp
    • E Value
      1.42E-149
    • BLAST Score
      538.5 bits
    • Similarity
      87.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      U82607
      19.79% cov
    • Alignment Length
      482 bp
  • Plasmid pE5

    Plasmid pE5

    • Public DB hit
      GI:153063
      M17990
    • Hit length
      2,473 bp
    • E Value
      1.42E-149
    • BLAST Score
      538.5 bits
    • Similarity
      87.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      M17990
      19.29% cov
    • Alignment Length
      482 bp
  • Shuttle vector pMTL85151

    Shuttle vector pMTL85151

    • Public DB hit
      GI:238481705
      FJ797652
    • Hit length
      3,729 bp
    • E Value
      8.66E-137
    • BLAST Score
      496 bits
    • Similarity
      87.85%
    • Coverage
      88.89%
    • Alignment (schematic)

      SEQ ID NO 2
      88.89% cov
      FJ797652
      11.37% cov
    • Alignment Length
      428 bp
  • Shuttle vector pMTL85141

    Shuttle vector pMTL85141

    • Public DB hit
      GI:238481701
      FJ797651
    • Hit length
      2,963 bp
    • E Value
      8.66E-137
    • BLAST Score
      496 bits
    • Similarity
      87.85%
    • Coverage
      88.89%
    • Alignment (schematic)

      SEQ ID NO 2
      88.89% cov
      FJ797651
      14.31% cov
    • Alignment Length
      428 bp
  • Reporter vector pGUSA

    Reporter vector pGUSA

    • Public DB hit
      GI:33520706
      AY292368
    • Hit length
      6,709 bp
    • E Value
      8.66E-137
    • BLAST Score
      496 bits
    • Similarity
      87.85%
    • Coverage
      88.89%
    • Alignment (schematic)

      SEQ ID NO 2
      88.89% cov
      AY292368
      6.32% cov
    • Alignment Length
      428 bp
  • Shuttle vector pSOS95

    Shuttle vector pSOS95

    • Public DB hit
      GI:28412270
      AY187686
    • Hit length
      6,995 bp
    • E Value
      8.66E-137
    • BLAST Score
      496 bits
    • Similarity
      87.85%
    • Coverage
      88.89%
    • Alignment (schematic)

      SEQ ID NO 2
      88.89% cov
      AY187686
      6.06% cov
    • Alignment Length
      428 bp
  • Shuttle vector pSOS94

    Shuttle vector pSOS94

    • Public DB hit
      GI:28412263
      AY187685
    • Hit length
      7,000 bp
    • E Value
      8.66E-137
    • BLAST Score
      496 bits
    • Similarity
      87.85%
    • Coverage
      88.89%
    • Alignment (schematic)

      SEQ ID NO 2
      88.89% cov
      AY187685
      6.06% cov
    • Alignment Length
      428 bp
  • Shuttle vector pSOS96

    Shuttle vector pSOS96

    • Public DB hit
      GI:28412256
      AY187684
    • Hit length
      7,076 bp
    • E Value
      8.66E-137
    • BLAST Score
      496 bits
    • Similarity
      87.85%
    • Coverage
      88.89%
    • Alignment (schematic)

      SEQ ID NO 2
      88.89% cov
      AY187684
      5.99% cov
    • Alignment Length
      428 bp
  • Bacillus subtilis

    Bacillus subtilis

    • Public DB hit
      GI:149050
      M13761
    • Hit length
      2,246 bp
    • E Value
      8.66E-137
    • BLAST Score
      496 bits
    • Similarity
      87.85%
    • Coverage
      88.89%
    • Alignment (schematic)

      SEQ ID NO 2
      88.89% cov
      M13761
      18.88% cov
    • Alignment Length
      428 bp
Occurrence
31 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
477
Type
DNA
Locations
Undetermined

Declared organism:
Staphylococcus aureus

Determined organism:
  • Staphylococcus aureus

    Staphylococcus aureus

    • Public DB hit
      GI:304389162
      CP002148
      1 of 11 hits reported for Staphylococcus aureus.
    • Hit length
      2,473 bp
    • E Value
      0E0
    • BLAST Score
      882 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP002148
      19.29% cov
    • Alignment Length
      477 bp
    • CIGAR string
      477M mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus haemolyticus JCSC1435

    Staphylococcus haemolyticus JCSC1435

    • Public DB hit
      GI:68448408
      AP006718
    • Hit length
      2,366 bp
    • E Value
      0E0
    • BLAST Score
      882 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AP006718
      20.16% cov
    • Alignment Length
      477 bp
  • Staphylococcus aureus subsp. aureus USA300_FPR3757

    Staphylococcus aureus subsp. aureus USA300_FPR3757

    • Public DB hit
      GI:87125821
      CP000258
    • Hit length
      37,136 bp
    • E Value
      0E0
    • BLAST Score
      882 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000258
      1.28% cov
    • Alignment Length
      477 bp
  • Staphylococcus lentus

    Staphylococcus lentus

    • Public DB hit
      GI:60416743
      AJ888003
    • Hit length
      6,913 bp
    • E Value
      0E0
    • BLAST Score
      882 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AJ888003
      6.9% cov
    • Alignment Length
      477 bp
  • Staphylococcus simulans

    Staphylococcus simulans

    • Public DB hit
      GI:2407670
      AF019140
    • Hit length
      2,526 bp
    • E Value
      0E0
    • BLAST Score
      882 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AF019140
      18.88% cov
    • Alignment Length
      477 bp
  • Staphylococcus chromogenes

    Staphylococcus chromogenes

    • Public DB hit
      GI:2317795
      U82607
    • Hit length
      2,410 bp
    • E Value
      0E0
    • BLAST Score
      882 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      U82607
      19.79% cov
    • Alignment Length
      477 bp
  • Plasmid pE5

    Plasmid pE5

    • Public DB hit
      GI:153063
      M17990
    • Hit length
      2,473 bp
    • E Value
      0E0
    • BLAST Score
      882 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      M17990
      19.29% cov
    • Alignment Length
      477 bp
  • Shuttle vector pMTL85151

    Shuttle vector pMTL85151

    • Public DB hit
      GI:238481705
      FJ797652
    • Hit length
      3,729 bp
    • E Value
      0E0
    • BLAST Score
      800.7 bits
    • Similarity
      100%
    • Coverage
      90.78%
    • Alignment (schematic)

      SEQ ID NO 3
      90.78% cov
      FJ797652
      11.61% cov
    • Alignment Length
      433 bp
  • Shuttle vector pMTL85141

    Shuttle vector pMTL85141

    • Public DB hit
      GI:238481701
      FJ797651
    • Hit length
      2,963 bp
    • E Value
      0E0
    • BLAST Score
      800.7 bits
    • Similarity
      100%
    • Coverage
      90.78%
    • Alignment (schematic)

      SEQ ID NO 3
      90.78% cov
      FJ797651
      14.61% cov
    • Alignment Length
      433 bp
  • Reporter vector pGUSA

    Reporter vector pGUSA

    • Public DB hit
      GI:33520706
      AY292368
    • Hit length
      6,709 bp
    • E Value
      0E0
    • BLAST Score
      800.7 bits
    • Similarity
      100%
    • Coverage
      90.78%
    • Alignment (schematic)

      SEQ ID NO 3
      90.78% cov
      AY292368
      6.45% cov
    • Alignment Length
      433 bp
  • Shuttle vector pSOS95

    Shuttle vector pSOS95

    • Public DB hit
      GI:28412270
      AY187686
    • Hit length
      6,995 bp
    • E Value
      0E0
    • BLAST Score
      800.7 bits
    • Similarity
      100%
    • Coverage
      90.78%
    • Alignment (schematic)

      SEQ ID NO 3
      90.78% cov
      AY187686
      6.19% cov
    • Alignment Length
      433 bp
  • Shuttle vector pSOS94

    Shuttle vector pSOS94

    • Public DB hit
      GI:28412263
      AY187685
    • Hit length
      7,000 bp
    • E Value
      0E0
    • BLAST Score
      800.7 bits
    • Similarity
      100%
    • Coverage
      90.78%
    • Alignment (schematic)

      SEQ ID NO 3
      90.78% cov
      AY187685
      6.19% cov
    • Alignment Length
      433 bp
  • Shuttle vector pSOS96

    Shuttle vector pSOS96

    • Public DB hit
      GI:28412256
      AY187684
    • Hit length
      7,076 bp
    • E Value
      0E0
    • BLAST Score
      800.7 bits
    • Similarity
      100%
    • Coverage
      90.78%
    • Alignment (schematic)

      SEQ ID NO 3
      90.78% cov
      AY187684
      6.12% cov
    • Alignment Length
      433 bp
  • Bacillus subtilis

    Bacillus subtilis

    • Public DB hit
      GI:149050
      M13761
    • Hit length
      2,246 bp
    • E Value
      0E0
    • BLAST Score
      800.7 bits
    • Similarity
      100%
    • Coverage
      90.78%
    • Alignment (schematic)

      SEQ ID NO 3
      90.78% cov
      M13761
      19.28% cov
    • Alignment Length
      433 bp
  • Staphylococcus epidermidis

    Staphylococcus epidermidis

    • Public DB hit
      GI:150829
      M12730
    • Hit length
      2,355 bp
    • E Value
      0E0
    • BLAST Score
      734.2 bits
    • Similarity
      100%
    • Coverage
      83.23%
    • Alignment (schematic)

      SEQ ID NO 3
      83.23% cov
      M12730
      16.86% cov
    • Alignment Length
      397 bp
Occurrence
34 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
1,173
Type
DNA
Locations
Undetermined

Declared organism:
Staphylococcus aureus

Determined organism:
  • Staphylococcus aureus subsp. aureus T0131

    Staphylococcus aureus subsp. aureus T0131

    • Public DB hit
      GI:329312723
      CP002643
    • Hit length
      2,913,900 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP002643
      0.04% cov
    • Alignment Length
      1,173 bp
    • CIGAR string
      1173M mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus sp. BS-02

    Bacillus sp. BS-02

    • Public DB hit
      GI:307634034
      HQ128580
    • Hit length
      16,543 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HQ128580
      7.09% cov
    • Alignment Length
      1,173 bp
    • CIGAR string
      1173M mismatches: 0 - insertions: 0 - deletions: 0
  • Enterococcus faecalis

    Enterococcus faecalis

    • Public DB hit
      GI:304325020
      GQ484956
    • Hit length
      48,365 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ484956
      2.43% cov
    • Alignment Length
      1,173 bp
    • CIGAR string
      1173M mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus str. JKD6008

    Staphylococcus aureus subsp. aureus str. JKD6008

    • Public DB hit
      GI:302749911
      CP002120
    • Hit length
      2,924,344 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP002120
      0.04% cov
    • Alignment Length
      1,173 bp
  • Staphylococcus aureus

    Staphylococcus aureus

    • Public DB hit
      GI:300492196
      GU565967
      1 of 12 hits reported for Staphylococcus aureus.
    • Hit length
      28,150 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GU565967
      4.17% cov
    • Alignment Length
      1,173 bp
  • synthetic Mycoplasma mycoides JCVI-syn1.0

    synthetic Mycoplasma mycoides JCVI-syn1.0

    • Public DB hit
      GI:296455217
      CP002027
    • Hit length
      1,078,809 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP002027
      0.11% cov
    • Alignment Length
      1,173 bp
  • Tri-shuttle cloning vector MiniTn-Puro-JCVI-1.7

    Tri-shuttle cloning vector MiniTn-Puro-JCVI-1.7

    • Public DB hit
      GI:291587255
      GU593055
    • Hit length
      13,902 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GU593055
      8.44% cov
    • Alignment Length
      1,173 bp
  • Tri-shuttle cloning vector pmycYACTn

    Tri-shuttle cloning vector pmycYACTn

    • Public DB hit
      GI:291587249
      GU593054
    • Hit length
      10,135 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GU593054
      11.57% cov
    • Alignment Length
      1,173 bp
  • Staphylococcus aureus subsp. aureus TW20

    Staphylococcus aureus subsp. aureus TW20

    • Public DB hit
      GI:269939526
      FN433596
    • Hit length
      3,043,210 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      FN433596
      0.04% cov
    • Alignment Length
      1,173 bp
  • Staphylococcus aureus SK6575

    Staphylococcus aureus SK6575

    • Public DB hit
      GI:260177124
      GQ900498
    • Hit length
      29,343 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ900498
      4% cov
    • Alignment Length
      1,173 bp
  • Enterococcus faecium

    Enterococcus faecium

    • Public DB hit
      GI:260177113
      GQ900487
    • Hit length
      56,689 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ900487
      2.07% cov
    • Alignment Length
      1,173 bp
  • Staphylococcus epidermidis

    Staphylococcus epidermidis

    • Public DB hit
      GI:260066164
      GQ900462
    • Hit length
      23,263 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ900462
      5.04% cov
    • Alignment Length
      1,173 bp
  • Staphylococcus sp. CDC25

    Staphylococcus sp. CDC25

    • Public DB hit
      GI:260066085
      GQ900383
    • Hit length
      32,487 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ900383
      3.61% cov
    • Alignment Length
      1,173 bp
  • Cloning vector Mini-Tn4001PStetM

    Cloning vector Mini-Tn4001PStetM

    • Public DB hit
      GI:259045723
      GQ420676
    • Hit length
      6,637 bp
    • E Value
      0E0
    • BLAST Score
      2,167.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      GQ420676
      17.67% cov
    • Alignment Length
      1,173 bp
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
705
Type
DNA
Locations
Undetermined

Declared organism:
Staphylococcus aureus

Determined organism:
  • Staphylococcus aureus subsp. aureus Mu3

    Staphylococcus aureus subsp. aureus Mu3

    • Public DB hit
      GI:156720466
      AP009324
    • Hit length
      2,880,168 bp
    • E Value
      0E0
    • BLAST Score
      1,251.3 bits
    • Similarity
      98.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AP009324
      0.02% cov
    • Alignment Length
      705 bp
    • CIGAR string
      23MN5MN37MN106MN74MNMN30MN5MN69M2N2MN17MN71MN2MN249M mismatches: 14 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus Mu50

    Staphylococcus aureus subsp. aureus Mu50

    • Public DB hit
      GI:47208328
      BA000017
    • Hit length
      2,878,529 bp
    • E Value
      0E0
    • BLAST Score
      1,251.3 bits
    • Similarity
      98.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BA000017
      0.02% cov
    • Alignment Length
      705 bp
    • CIGAR string
      23MN5MN37MN106MN74MNMN30MN5MN69M2N2MN17MN71MN2MN249M mismatches: 14 - insertions: 0 - deletions: 0
  • Staphylococcus aureus

    Staphylococcus aureus

    • Public DB hit
      GI:18266750
      U93688
      1 of 8 hits reported for Staphylococcus aureus.
    • Hit length
      15,254 bp
    • E Value
      0E0
    • BLAST Score
      1,251.3 bits
    • Similarity
      98.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      U93688
      4.62% cov
    • Alignment Length
      705 bp
    • CIGAR string
      23MN5MN37MN106MN74MNMN30MN5MN69M2N2MN17MN71MN2MN249M mismatches: 14 - insertions: 0 - deletions: 0
  • Staphylococcus aureus subsp. aureus N315

    Staphylococcus aureus subsp. aureus N315

    • Public DB hit
      GI:47118324
      BA000018
    • Hit length
      2,814,816 bp
    • E Value
      0E0
    • BLAST Score
      1,251.3 bits
    • Similarity
      98.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BA000018
      0.03% cov
    • Alignment Length
      705 bp
  • Staphylococcus aureus RF122

    Staphylococcus aureus RF122

    • Public DB hit
      GI:82655308
      AJ938182
    • Hit length
      2,742,531 bp
    • E Value
      0E0
    • BLAST Score
      1,251.3 bits
    • Similarity
      98.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AJ938182
      0.03% cov
    • Alignment Length
      705 bp
  • Staphylococcus aureus subsp. aureus ED133

    Staphylococcus aureus subsp. aureus ED133

    • Public DB hit
      GI:298693322
      CP001996
    • Hit length
      2,832,478 bp
    • E Value
      0E0
    • BLAST Score
      1,229.1 bits
    • Similarity
      97.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP001996
      0.02% cov
    • Alignment Length
      705 bp
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
1,560
Type
DNA
Locations
Undetermined

Declared organism:
Staphylococcus aureus

Determined organism:
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
1,560
Type
DNA
Locations
Undetermined

Declared organism:
Staphylococcus aureus

Determined organism:
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
1,560
Type
DNA
Locations
Undetermined

Declared organism:
Staphylococcus aureus

Determined organism:
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
6,672
Type
DNA
Locations
Undetermined

Declared organism:
Staphylococcus aureus

Determined organism:
  • Staphylococcus aureus subsp. aureus MRSA252

    Staphylococcus aureus subsp. aureus MRSA252

    • Public DB hit
      GI:49240382
      BX571856
    • Hit length
      2,902,619 bp
    • E Value
      0E0
    • BLAST Score
      11,365.4 bits
    • Similarity
      96.15%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      BX571856
      0.23% cov
    • Alignment Length
      6,674 bp
    • CIGAR string
      23MN5MN8MN2MN47MN216MN151MN2MN10MN3MN96MN70MN13MN39MN14MN2MN8MN53MN116MN35MN15MN58MN117MN11MN131MN43MN218MN21MN103MN11MN29MN44MN20MNM2N8MN8MN50MN41M2N34MN10MI2MD43MN8MN3MN25MN14MNMN15MN4MN9MN29MN8MN2M2N7MN12MN4MN8M2N8MNMN5MN5MN8MN35MN50MN29MN26MN53MN5MN8MN2M2NM3N15MN8MN8MNM2N5MN101MN7MN22MN13MN3MN4MN14MN5MN11MN6MN12M2N6MN7MN17MN26MN5MN5MN8MN6MN8MN4MN27MN4MN2MN14MN5MN2MN24MN13MN2MN3MN7MNMNMN7M2N19MN2MN2MN8MN2MN9MN16MN8MN14MN2MN17M2N4MN11MN2MN4M2N32MN11MN2M2NMN5MN13MN8MN9M2N7MN2MN2MN2MN3MN4MN5MN2MN5MN11MN2MN5MN2MN15MN11MNMN2MN8MN2MN15MNMN6M3N5MN5MN5MN5MN4MN15MN2MN9MN31MN17M2N13MD2MIN2MN5MN2MN2MN2MN5MN8MN2MN12MNMN8MN5MN8MN2MN41MN2MN5MN2MN34M2N17MN11MN8MN5MN5MN8MN26MN17MN5MN14MN2MN26MN11MN62MN11MN27MN7MN5MN32MN2MN55MN27MN6MN5M2N6MN14MN2MN5MNMN143MN39MN17MN39MNMNM2N21MNMN35MN11MN64MN12MN8MN80MN95MN14MN20MN28MN30MN3MN2003M mismatches: 253 - insertions: 2 - deletions: 2
  • Staphylococcus aureus subsp. aureus TCH60

    Staphylococcus aureus subsp. aureus TCH60

    • Public DB hit
      GI:312436391
      CP002110
    • Hit length
      2,802,675 bp
    • E Value
      0E0
    • BLAST Score
      11,326.6 bits
    • Similarity
      96.03%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CP002110
      0.24% cov
    • Alignment Length
      6,680 bp
    • CIGAR string
      23MN5MN8MN2MN47MN216MN151MN2MN10MN3MN96MN70MN13MN39MN14MN2MN8MN53MN116MN35MN15MN58MN117MN11MN131MN43MN218MN21MN103MN11MN29MN44MN20MNM2N8MN8MN50MN41M2N34MN10MI2MD43MN8MN3MN25MN14MNMN15MN4MN9MN29MN8MN2M2N7MN12MN4MN8M2N8MNMN5MN5MN8MN35MN50MN29MN26MN53MN5MN8MN2M2NM3N15MN8MN8MNM2N5MN64MN36MN7MN22MN13MN3MN4MN14MN5MN11MN6MN12M2N6MN7MN17MN26MN5MN5MN8MN6MN8MN4MN27MN4MN2MN14MN5MN2MN24MN13MN2MN3MN7MNMNMN7M2N19MN2MN2MN8MN2MN9MN16MN8MN14MN2MN17M2N4MN11MN2MN4M2N32MN11MN2M2NMN5MN13MN8MN9M2N7MN2MN2MN2MN3MN4MN5MN2MN5MN11MN2MN5MN2MN15MN11MNMN2MN8MN2MN15MNMN6M3N5MN5MN5MN5MN4MN15MN2MN9MN31MN17M2N13MD2MIN2MN5MN2MN2MN2MN5MN8MN2MN12MNMN8MN5MN8MN2MN41MN2MN5MN2MN34M2N17MN11MN8MN5MN5MN8MN26MN17MN5MN14MN2MN26MN11MN62MN11MN27MN7MN5MN32MN2MN55MN27MN6MN5M2N6MN14MN2MN5MNMN143MN39MN17MN37MNMNMNM2N21MNMN35MN11MN64MN12MN8MN80MN95MN14MN20MN28MN30MN3MN657M2I2M3IMI1343M mismatches: 255 - insertions: 8 - deletions: 2
  • Staphylococcus aureus subsp. aureus ST398

    Staphylococcus aureus subsp. aureus ST398

    • Public DB hit
      GI:283469229
      AM990992
    • Hit length
      2,872,582 bp
    • E Value
      0E0
    • BLAST Score
      10,519.6 bits
    • Similarity
      93.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AM990992
      0.23% cov
    • Alignment Length
      6,690 bp
  • Staphylococcus aureus subsp. aureus MSSA476

    Staphylococcus aureus subsp. aureus MSSA476

    • Public DB hit
      GI:49243355
      BX571857
    • Hit length
      2,799,802 bp
    • E Value
      0E0
    • BLAST Score
      9,217.7 bits
    • Similarity
      94.48%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      BX571857
      0.2% cov
    • Alignment Length
      5,688 bp
  • Staphylococcus aureus subsp. aureus MW2

    Staphylococcus aureus subsp. aureus MW2

    • Public DB hit
      GI:47118312
      BA000033
    • Hit length
      2,820,462 bp
    • E Value
      0E0
    • BLAST Score
      9,217.7 bits
    • Similarity
      94.48%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      BA000033
      0.2% cov
    • Alignment Length
      5,688 bp
  • Staphylococcus aureus

    Staphylococcus aureus

    • Public DB hit
      GI:7415417
      AB015223
      1 of 5 hits reported for Staphylococcus aureus.
    • Hit length
      8,923 bp
    • E Value
      0E0
    • BLAST Score
      9,217.7 bits
    • Similarity
      94.48%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      AB015223
      63.68% cov
    • Alignment Length
      5,688 bp
  • Staphylococcus aureus subsp. aureus TW20

    Staphylococcus aureus subsp. aureus TW20

    • Public DB hit
      GI:269939526
      FN433596
    • Hit length
      3,043,210 bp
    • E Value
      0E0
    • BLAST Score
      8,985.1 bits
    • Similarity
      93.76%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      FN433596
      0.19% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus str. Newman

    Staphylococcus aureus subsp. aureus str. Newman

    • Public DB hit
      GI:150373012
      AP009351
    • Hit length
      2,878,897 bp
    • E Value
      0E0
    • BLAST Score
      8,985.1 bits
    • Similarity
      93.76%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      AP009351
      0.2% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus COL

    Staphylococcus aureus subsp. aureus COL

    • Public DB hit
      GI:57284222
      CP000046
      1 of 3 hits reported for Staphylococcus aureus subsp. aureus COL.
    • Hit length
      2,809,422 bp
    • E Value
      0E0
    • BLAST Score
      8,985.1 bits
    • Similarity
      93.76%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      CP000046
      0.2% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus NCTC 8325

    Staphylococcus aureus subsp. aureus NCTC 8325

    • Public DB hit
      GI:87201381
      CP000253
    • Hit length
      2,821,361 bp
    • E Value
      0E0
    • BLAST Score
      8,985.1 bits
    • Similarity
      93.76%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      CP000253
      0.2% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus T0131

    Staphylococcus aureus subsp. aureus T0131

    • Public DB hit
      GI:329312723
      CP002643
    • Hit length
      2,913,900 bp
    • E Value
      0E0
    • BLAST Score
      8,979.5 bits
    • Similarity
      93.74%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      CP002643
      0.19% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus USA300_TCH1516

    Staphylococcus aureus subsp. aureus USA300_TCH1516

    • Public DB hit
      GI:160367075
      CP000730
    • Hit length
      2,872,915 bp
    • E Value
      0E0
    • BLAST Score
      8,974 bits
    • Similarity
      93.73%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      CP000730
      0.2% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus USA300_FPR3757

    Staphylococcus aureus subsp. aureus USA300_FPR3757

    • Public DB hit
      GI:87125858
      CP000255
    • Hit length
      2,872,769 bp
    • E Value
      0E0
    • BLAST Score
      8,974 bits
    • Similarity
      93.73%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      CP000255
      0.2% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus str. JKD6008

    Staphylococcus aureus subsp. aureus str. JKD6008

    • Public DB hit
      GI:302749911
      CP002120
    • Hit length
      2,924,344 bp
    • E Value
      0E0
    • BLAST Score
      8,964.8 bits
    • Similarity
      93.69%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      CP002120
      0.19% cov
    • Alignment Length
      5,693 bp
  • Staphylococcus aureus subsp. aureus Mu3

    Staphylococcus aureus subsp. aureus Mu3

    • Public DB hit
      GI:156720466
      AP009324
    • Hit length
      2,880,168 bp
    • E Value
      0E0
    • BLAST Score
      8,881.7 bits
    • Similarity
      93.45%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      AP009324
      0.2% cov
    • Alignment Length
      5,692 bp
  • Staphylococcus aureus subsp. aureus Mu50

    Staphylococcus aureus subsp. aureus Mu50

    • Public DB hit
      GI:47208328
      BA000017
    • Hit length
      2,878,529 bp
    • E Value
      0E0
    • BLAST Score
      8,881.7 bits
    • Similarity
      93.45%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      BA000017
      0.2% cov
    • Alignment Length
      5,692 bp
  • Staphylococcus aureus subsp. aureus N315

    Staphylococcus aureus subsp. aureus N315

    • Public DB hit
      GI:47118324
      BA000018
    • Hit length
      2,814,816 bp
    • E Value
      0E0
    • BLAST Score
      8,881.7 bits
    • Similarity
      93.45%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      BA000018
      0.2% cov
    • Alignment Length
      5,692 bp
  • Staphylococcus aureus 04-02981

    Staphylococcus aureus 04-02981

    • Public DB hit
      GI:311222926
      CP001844
    • Hit length
      2,821,452 bp
    • E Value
      0E0
    • BLAST Score
      8,876.1 bits
    • Similarity
      93.43%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      CP001844
      0.2% cov
    • Alignment Length
      5,692 bp
  • Staphylococcus aureus subsp. aureus ED98

    Staphylococcus aureus subsp. aureus ED98

    • Public DB hit
      GI:262073980
      CP001781
    • Hit length
      2,824,404 bp
    • E Value
      0E0
    • BLAST Score
      8,876.1 bits
    • Similarity
      93.43%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 9
      85.12% cov
      CP001781
      0.2% cov
    • Alignment Length
      5,692 bp
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
6,672
Type
DNA
Locations
Undetermined

Declared organism:
Staphylococcus aureus

Determined organism:
  • Staphylococcus aureus subsp. aureus MRSA252

    Staphylococcus aureus subsp. aureus MRSA252

    • Public DB hit
      GI:49240382
      BX571856
    • Hit length
      2,902,619 bp
    • E Value
      0E0
    • BLAST Score
      11,365.4 bits
    • Similarity
      96.15%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      BX571856
      0.23% cov
    • Alignment Length
      6,674 bp
    • CIGAR string
      23MN5MN8MN2MN47MN216MN151MN2MN10MN3MN96MN70MN13MN39MN14MN2MN8MN53MN116MN35MN15MN58MN117MN11MN131MN43MN218MN21MN103MN11MN29MN44MN20MNM2N8MN8MN50MN41M2N34MN10MI2MD43MN8MN3MN25MN14MNMN15MN4MN9MN29MN8MN2M2N7MN12MN4MN8M2N8MNMN5MN5MN8MN35MN50MN29MN26MN53MN5MN8MN2M2NM3N15MN8MN8MNM2N5MN101MN7MN22MN13MN3MN4MN14MN5MN11MN6MN12M2N6MN7MN17MN26MN5MN5MN8MN6MN8MN4MN27MN4MN2MN14MN5MN2MN24MN13MN2MN3MN7MNMNMN7M2N19MN2MN2MN8MN2MN9MN16MN8MN14MN2MN17M2N4MN11MN2MN4M2N32MN11MN2M2NMN5MN13MN8MN9M2N7MN2MN2MN2MN3MN4MN5MN2MN5MN11MN2MN5MN2MN15MN11MNMN2MN8MN2MN15MNMN6M3N5MN5MN5MN5MN4MN15MN2MN9MN31MN17M2N13MD2MIN2MN5MN2MN2MN2MN5MN8MN2MN12MNMN8MN5MN8MN2MN41MN2MN5MN2MN34M2N17MN11MN8MN5MN5MN8MN26MN17MN5MN14MN2MN26MN11MN62MN11MN27MN7MN5MN32MN2MN55MN27MN6MN5M2N6MN14MN2MN5MNMN143MN39MN17MN39MNMNM2N21MNMN35MN11MN64MN12MN8MN80MN95MN14MN20MN28MN30MN3MN2003M mismatches: 253 - insertions: 2 - deletions: 2
  • Staphylococcus aureus subsp. aureus TCH60

    Staphylococcus aureus subsp. aureus TCH60

    • Public DB hit
      GI:312436391
      CP002110
    • Hit length
      2,802,675 bp
    • E Value
      0E0
    • BLAST Score
      11,326.6 bits
    • Similarity
      96.03%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP002110
      0.24% cov
    • Alignment Length
      6,680 bp
    • CIGAR string
      23MN5MN8MN2MN47MN216MN151MN2MN10MN3MN96MN70MN13MN39MN14MN2MN8MN53MN116MN35MN15MN58MN117MN11MN131MN43MN218MN21MN103MN11MN29MN44MN20MNM2N8MN8MN50MN41M2N34MN10MI2MD43MN8MN3MN25MN14MNMN15MN4MN9MN29MN8MN2M2N7MN12MN4MN8M2N8MNMN5MN5MN8MN35MN50MN29MN26MN53MN5MN8MN2M2NM3N15MN8MN8MNM2N5MN64MN36MN7MN22MN13MN3MN4MN14MN5MN11MN6MN12M2N6MN7MN17MN26MN5MN5MN8MN6MN8MN4MN27MN4MN2MN14MN5MN2MN24MN13MN2MN3MN7MNMNMN7M2N19MN2MN2MN8MN2MN9MN16MN8MN14MN2MN17M2N4MN11MN2MN4M2N32MN11MN2M2NMN5MN13MN8MN9M2N7MN2MN2MN2MN3MN4MN5MN2MN5MN11MN2MN5MN2MN15MN11MNMN2MN8MN2MN15MNMN6M3N5MN5MN5MN5MN4MN15MN2MN9MN31MN17M2N13MD2MIN2MN5MN2MN2MN2MN5MN8MN2MN12MNMN8MN5MN8MN2MN41MN2MN5MN2MN34M2N17MN11MN8MN5MN5MN8MN26MN17MN5MN14MN2MN26MN11MN62MN11MN27MN7MN5MN32MN2MN55MN27MN6MN5M2N6MN14MN2MN5MNMN143MN39MN17MN37MNMNMNM2N21MNMN35MN11MN64MN12MN8MN80MN95MN14MN20MN28MN30MN3MN657M2I2M3IMI1343M mismatches: 255 - insertions: 8 - deletions: 2
  • Staphylococcus aureus subsp. aureus ST398

    Staphylococcus aureus subsp. aureus ST398

    • Public DB hit
      GI:283469229
      AM990992
    • Hit length
      2,872,582 bp
    • E Value
      0E0
    • BLAST Score
      10,519.6 bits
    • Similarity
      93.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AM990992
      0.23% cov
    • Alignment Length
      6,690 bp
  • Staphylococcus aureus subsp. aureus MSSA476

    Staphylococcus aureus subsp. aureus MSSA476

    • Public DB hit
      GI:49243355
      BX571857
    • Hit length
      2,799,802 bp
    • E Value
      0E0
    • BLAST Score
      9,217.7 bits
    • Similarity
      94.48%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      BX571857
      0.2% cov
    • Alignment Length
      5,688 bp
  • Staphylococcus aureus subsp. aureus MW2

    Staphylococcus aureus subsp. aureus MW2

    • Public DB hit
      GI:47118312
      BA000033
    • Hit length
      2,820,462 bp
    • E Value
      0E0
    • BLAST Score
      9,217.7 bits
    • Similarity
      94.48%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      BA000033
      0.2% cov
    • Alignment Length
      5,688 bp
  • Staphylococcus aureus

    Staphylococcus aureus

    • Public DB hit
      GI:7415417
      AB015223
      1 of 5 hits reported for Staphylococcus aureus.
    • Hit length
      8,923 bp
    • E Value
      0E0
    • BLAST Score
      9,217.7 bits
    • Similarity
      94.48%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      AB015223
      63.68% cov
    • Alignment Length
      5,688 bp
  • Staphylococcus aureus subsp. aureus TW20

    Staphylococcus aureus subsp. aureus TW20

    • Public DB hit
      GI:269939526
      FN433596
    • Hit length
      3,043,210 bp
    • E Value
      0E0
    • BLAST Score
      8,985.1 bits
    • Similarity
      93.76%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      FN433596
      0.19% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus str. Newman

    Staphylococcus aureus subsp. aureus str. Newman

    • Public DB hit
      GI:150373012
      AP009351
    • Hit length
      2,878,897 bp
    • E Value
      0E0
    • BLAST Score
      8,985.1 bits
    • Similarity
      93.76%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      AP009351
      0.2% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus COL

    Staphylococcus aureus subsp. aureus COL

    • Public DB hit
      GI:57284222
      CP000046
      1 of 3 hits reported for Staphylococcus aureus subsp. aureus COL.
    • Hit length
      2,809,422 bp
    • E Value
      0E0
    • BLAST Score
      8,985.1 bits
    • Similarity
      93.76%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      CP000046
      0.2% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus NCTC 8325

    Staphylococcus aureus subsp. aureus NCTC 8325

    • Public DB hit
      GI:87201381
      CP000253
    • Hit length
      2,821,361 bp
    • E Value
      0E0
    • BLAST Score
      8,985.1 bits
    • Similarity
      93.76%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      CP000253
      0.2% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus T0131

    Staphylococcus aureus subsp. aureus T0131

    • Public DB hit
      GI:329312723
      CP002643
    • Hit length
      2,913,900 bp
    • E Value
      0E0
    • BLAST Score
      8,979.5 bits
    • Similarity
      93.74%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      CP002643
      0.19% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus USA300_TCH1516

    Staphylococcus aureus subsp. aureus USA300_TCH1516

    • Public DB hit
      GI:160367075
      CP000730
    • Hit length
      2,872,915 bp
    • E Value
      0E0
    • BLAST Score
      8,974 bits
    • Similarity
      93.73%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      CP000730
      0.2% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus USA300_FPR3757

    Staphylococcus aureus subsp. aureus USA300_FPR3757

    • Public DB hit
      GI:87125858
      CP000255
    • Hit length
      2,872,769 bp
    • E Value
      0E0
    • BLAST Score
      8,974 bits
    • Similarity
      93.73%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      CP000255
      0.2% cov
    • Alignment Length
      5,691 bp
  • Staphylococcus aureus subsp. aureus str. JKD6008

    Staphylococcus aureus subsp. aureus str. JKD6008

    • Public DB hit
      GI:302749911
      CP002120
    • Hit length
      2,924,344 bp
    • E Value
      0E0
    • BLAST Score
      8,964.8 bits
    • Similarity
      93.69%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      CP002120
      0.19% cov
    • Alignment Length
      5,693 bp
  • Staphylococcus aureus subsp. aureus Mu3

    Staphylococcus aureus subsp. aureus Mu3

    • Public DB hit
      GI:156720466
      AP009324
    • Hit length
      2,880,168 bp
    • E Value
      0E0
    • BLAST Score
      8,881.7 bits
    • Similarity
      93.45%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      AP009324
      0.2% cov
    • Alignment Length
      5,692 bp
  • Staphylococcus aureus subsp. aureus Mu50

    Staphylococcus aureus subsp. aureus Mu50

    • Public DB hit
      GI:47208328
      BA000017
    • Hit length
      2,878,529 bp
    • E Value
      0E0
    • BLAST Score
      8,881.7 bits
    • Similarity
      93.45%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      BA000017
      0.2% cov
    • Alignment Length
      5,692 bp
  • Staphylococcus aureus subsp. aureus N315

    Staphylococcus aureus subsp. aureus N315

    • Public DB hit
      GI:47118324
      BA000018
    • Hit length
      2,814,816 bp
    • E Value
      0E0
    • BLAST Score
      8,881.7 bits
    • Similarity
      93.45%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      BA000018
      0.2% cov
    • Alignment Length
      5,692 bp
  • Staphylococcus aureus 04-02981

    Staphylococcus aureus 04-02981

    • Public DB hit
      GI:311222926
      CP001844
    • Hit length
      2,821,452 bp
    • E Value
      0E0
    • BLAST Score
      8,876.1 bits
    • Similarity
      93.43%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      CP001844
      0.2% cov
    • Alignment Length
      5,692 bp
  • Staphylococcus aureus subsp. aureus ED98

    Staphylococcus aureus subsp. aureus ED98

    • Public DB hit
      GI:262073980
      CP001781
    • Hit length
      2,824,404 bp
    • E Value
      0E0
    • BLAST Score
      8,876.1 bits
    • Similarity
      93.43%
    • Coverage
      85.12%
    • Alignment (schematic)

      SEQ ID NO 10
      85.12% cov
      CP001781
      0.2% cov
    • Alignment Length
      5,692 bp
Occurrence
8 times in PatSeqDB
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