Protein Complex And Uses

  • Published: Apr 15, 2010
  • Earliest Priority: Dec 22 2006
  • Family: 6
  • Cited Works: 2
  • Cited by: 0
  • Cites: 0
  • Sequences: 34
  • Additional Info: Cited Works Full text
Data obtained from: USPTO Fulltext
34 sequences found in this patent (in total)

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Download sequences in fasta format: 6 peptides 18 nucleotides 10 RNAs

Displaying 1 - 10 of 34 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
482
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:55953117
      NP_003943
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      482 aa
    • E Value
      0E0
    • BLAST Score
      987.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_003943
      100% cov
    • Alignment Length
      482 aa
    • CIGAR string
      482M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:33303901
      AAQ02464
    • Hit length
      483 aa
    • E Value
      0E0
    • BLAST Score
      984.9 bits
    • Similarity
      99.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAQ02464
      99.79% cov
    • Alignment Length
      482 aa
    • CIGAR string
      419MN62M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114638836
      XP_001172909
    • Hit length
      482 aa
    • E Value
      0E0
    • BLAST Score
      981.1 bits
    • Similarity
      100%
    • Coverage
      99.79%
    • Alignment (schematic)

      SEQ ID NO 1
      99.79% cov
      XP_001172909
      99.79% cov
    • Alignment Length
      481 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296218920
      XP_002755666
    • Hit length
      489 aa
    • E Value
      0E0
    • BLAST Score
      898.7 bits
    • Similarity
      94.88%
    • Coverage
      99.79%
    • Alignment (schematic)

      SEQ ID NO 1
      99.79% cov
      XP_002755666
      99.8% cov
    • Alignment Length
      488 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109105416
      XP_001117937
    • Hit length
      512 aa
    • E Value
      0E0
    • BLAST Score
      886.3 bits
    • Similarity
      95.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_001117937
      95.12% cov
    • Alignment Length
      487 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301771826
      XP_002921326
    • Hit length
      482 aa
    • E Value
      0E0
    • BLAST Score
      880.2 bits
    • Similarity
      94.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002921326
      100% cov
    • Alignment Length
      484 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73982831
      XP_851971
    • Hit length
      482 aa
    • E Value
      0E0
    • BLAST Score
      880.2 bits
    • Similarity
      94.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_851971
      100% cov
    • Alignment Length
      484 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297688024
      XP_002821492
    • Hit length
      508 aa
    • E Value
      0E0
    • BLAST Score
      879.8 bits
    • Similarity
      96.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002821492
      95.08% cov
    • Alignment Length
      484 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:329663408
      NP_001192511
    • Hit length
      485 aa
    • E Value
      0E0
    • BLAST Score
      877.9 bits
    • Similarity
      95.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001192511
      100% cov
    • Alignment Length
      485 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:166091450
      NP_001010962
    • Hit length
      485 aa
    • E Value
      0E0
    • BLAST Score
      867.8 bits
    • Similarity
      94.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001010962
      100% cov
    • Alignment Length
      485 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:10946894
      NP_067460
    • Hit length
      485 aa
    • E Value
      0E0
    • BLAST Score
      866.3 bits
    • Similarity
      94.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_067460
      100% cov
    • Alignment Length
      485 aa
Occurrence
39 times in PatSeqDB
Tools
SEQ ID NO
2
Length
766
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:33188459
      NP_004324
    • Hit length
      766 aa
    • E Value
      0E0
    • BLAST Score
      1,592.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_004324
      100% cov
    • Alignment Length
      766 aa
    • CIGAR string
      766M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281353980
      EFB29564
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      721 aa
    • E Value
      0E0
    • BLAST Score
      1,490.7 bits
    • Similarity
      99.45%
    • Coverage
      94.13%
    • Alignment (schematic)

      SEQ ID NO 2
      94.13% cov
      EFB29564
      100% cov
    • Alignment Length
      721 aa
    • CIGAR string
      45HN70MN26M2N161MN14MN3MN63MN376M mismatches: 8 - insertions: 0 - deletions: 0
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311275262
      XP_003134658
    • Hit length
      720 aa
    • E Value
      0E0
    • BLAST Score
      1,488.8 bits
    • Similarity
      99.44%
    • Coverage
      93.99%
    • Alignment (schematic)

      SEQ ID NO 2
      93.99% cov
      XP_003134658
      100% cov
    • Alignment Length
      720 aa
    • CIGAR string
      46H70MN26M2N176MN3MN63MN375MN mismatches: 7 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194209969
      XP_001496314
    • Hit length
      714 aa
    • E Value
      0E0
    • BLAST Score
      1,476.1 bits
    • Similarity
      99.44%
    • Coverage
      93.21%
    • Alignment (schematic)

      SEQ ID NO 2
      93.21% cov
      XP_001496314
      100% cov
    • Alignment Length
      714 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332243387
      XP_003270861
    • Hit length
      764 aa
    • E Value
      0E0
    • BLAST Score
      1,470.3 bits
    • Similarity
      99.61%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003270861
      100% cov
    • Alignment Length
      766 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297681697
      XP_002818581
    • Hit length
      764 aa
    • E Value
      0E0
    • BLAST Score
      1,469.5 bits
    • Similarity
      99.61%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002818581
      100% cov
    • Alignment Length
      766 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296210467
      XP_002751976
    • Hit length
      764 aa
    • E Value
      0E0
    • BLAST Score
      1,464.9 bits
    • Similarity
      99.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002751976
      100% cov
    • Alignment Length
      766 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:149065321
      EDM15397
    • Hit length
      785 aa
    • E Value
      0E0
    • BLAST Score
      1,445.3 bits
    • Similarity
      97.88%
    • Coverage
      98.17%
    • Alignment (schematic)

      SEQ ID NO 2
      98.17% cov
      EDM15397
      95.8% cov
    • Alignment Length
      755 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297474088
      XP_002687048
      1 of 3 hits reported for Bos taurus.
    • Hit length
      765 aa
    • E Value
      0E0
    • BLAST Score
      1,436.4 bits
    • Similarity
      97.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002687048
      100% cov
    • Alignment Length
      769 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:50428971
      AAT77155
    • Hit length
      749 aa
    • E Value
      0E0
    • BLAST Score
      1,424.8 bits
    • Similarity
      98.93%
    • Coverage
      98.04%
    • Alignment (schematic)

      SEQ ID NO 2
      98.04% cov
      AAT77155
      100% cov
    • Alignment Length
      751 aa
  • Coturnix coturnix

    Coturnix coturnix

    • Public DB hit
      GI:213599
      AAA49492
    • Hit length
      767 aa
    • E Value
      0E0
    • BLAST Score
      1,407.1 bits
    • Similarity
      96.13%
    • Coverage
      97.39%
    • Alignment (schematic)

      SEQ ID NO 2
      97.39% cov
      AAA49492
      97.65% cov
    • Alignment Length
      749 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:148681648
      EDL13595
    • Hit length
      785 aa
    • E Value
      0E0
    • BLAST Score
      1,406.7 bits
    • Similarity
      97.35%
    • Coverage
      98.17%
    • Alignment (schematic)

      SEQ ID NO 2
      98.17% cov
      EDL13595
      95.67% cov
    • Alignment Length
      754 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334348489
      XP_001375430
    • Hit length
      759 aa
    • E Value
      0E0
    • BLAST Score
      1,401.7 bits
    • Similarity
      96.35%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001375430
      100% cov
    • Alignment Length
      768 aa
Occurrence
387 times in PatSeqDB
Tools
SEQ ID NO
3
Length
737
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4885563
      NP_005391
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      737 aa
    • E Value
      0E0
    • BLAST Score
      1,540.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_005391
      100% cov
    • Alignment Length
      737 aa
    • CIGAR string
      737M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332813074
      XP_003309040
    • Hit length
      737 aa
    • E Value
      0E0
    • BLAST Score
      1,538.9 bits
    • Similarity
      99.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_003309040
      100% cov
    • Alignment Length
      737 aa
    • CIGAR string
      9MN727M mismatches: 1 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109102817
      XP_001112763
    • Hit length
      736 aa
    • E Value
      0E0
    • BLAST Score
      1,533.1 bits
    • Similarity
      99.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_001112763
      100% cov
    • Alignment Length
      737 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149727601
      XP_001499103
    • Hit length
      737 aa
    • E Value
      0E0
    • BLAST Score
      1,530.8 bits
    • Similarity
      99.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_001499103
      100% cov
    • Alignment Length
      737 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:162287148
      NP_001104590
    • Hit length
      737 aa
    • E Value
      0E0
    • BLAST Score
      1,528.8 bits
    • Similarity
      99.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001104590
      100% cov
    • Alignment Length
      737 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73969530
      XP_851861
    • Hit length
      737 aa
    • E Value
      0E0
    • BLAST Score
      1,526.1 bits
    • Similarity
      99.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_851861
      100% cov
    • Alignment Length
      737 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:49359177
      AAT65503
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      737 aa
    • E Value
      0E0
    • BLAST Score
      1,524.2 bits
    • Similarity
      99.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAT65503
      100% cov
    • Alignment Length
      737 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301753234
      XP_002912457
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      736 aa
    • E Value
      0E0
    • BLAST Score
      1,518.8 bits
    • Similarity
      99.05%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002912457
      100% cov
    • Alignment Length
      737 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6755084
      NP_035234
      1 of 2 hits reported for Mus musculus.
    • Hit length
      737 aa
    • E Value
      0E0
    • BLAST Score
      1,518.8 bits
    • Similarity
      99.46%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_035234
      100% cov
    • Alignment Length
      737 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:126723241
      NP_001075743
    • Hit length
      736 aa
    • E Value
      0E0
    • BLAST Score
      1,517.7 bits
    • Similarity
      99.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001075743
      100% cov
    • Alignment Length
      737 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:126303903
      XP_001375626
    • Hit length
      737 aa
    • E Value
      0E0
    • BLAST Score
      1,501.5 bits
    • Similarity
      98.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_001375626
      100% cov
    • Alignment Length
      737 aa
  • Taeniopygia guttata

    Taeniopygia guttata

    • Public DB hit
      GI:224047237
      XP_002196635
    • Hit length
      743 aa
    • E Value
      0E0
    • BLAST Score
      1,468.8 bits
    • Similarity
      97.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002196635
      100% cov
    • Alignment Length
      743 aa
Occurrence
220 times in PatSeqDB
Tools
SEQ ID NO
4
Length
8
Sequence Type
peptide
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332813074
      XP_003309040
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      737 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003309040
      1.09% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301753234
      XP_002912457
      1 of 3 hits reported for Ailuropoda melanoleuca.
    • Hit length
      736 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002912457
      1.09% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149727601
      XP_001499103
      1 of 2 hits reported for Equus caballus.
    • Hit length
      737 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001499103
      1.09% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:126303903
      XP_001375626
      1 of 2 hits reported for Monodelphis domestica.
    • Hit length
      737 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001375626
      1.09% cov
    • Alignment Length
      8 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:162287148
      NP_001104590
      1 of 2 hits reported for Bos taurus.
    • Hit length
      737 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001104590
      1.09% cov
    • Alignment Length
      8 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109102817
      XP_001112763
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      736 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001112763
      1.09% cov
    • Alignment Length
      8 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73969530
      XP_851861
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      737 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_851861
      1.09% cov
    • Alignment Length
      8 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6755084
      NP_035234
      1 of 3 hits reported for Mus musculus.
    • Hit length
      737 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_035234
      1.09% cov
    • Alignment Length
      8 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:126723241
      NP_001075743
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      736 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001075743
      1.09% cov
    • Alignment Length
      8 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4885563
      NP_005391
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      737 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_005391
      1.09% cov
    • Alignment Length
      8 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:39930373
      NP_058867
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      737 aa
    • E Value
      4.83E2
    • BLAST Score
      26.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_058867
      1.09% cov
    • Alignment Length
      8 aa
Occurrence
182 times in PatSeqDB
Tools
SEQ ID NO
5
Length
9
Sequence Type
peptide
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Daphnia pulex

    Daphnia pulex

    • Public DB hit
      GI:321461260
      EFX72294
    • Hit length
      689 aa
    • E Value
      4.58E0
    • BLAST Score
      34.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      EFX72294
      1.31% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Apis mellifera

    Apis mellifera

    • Public DB hit
      GI:201023355
      NP_001128420
    • Hit length
      673 aa
    • E Value
      5.2E0
    • BLAST Score
      33.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001128420
      1.34% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:118097952
      XP_414868
    • Hit length
      670 aa
    • E Value
      5.5E0
    • BLAST Score
      33.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_414868
      1.34% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Nasonia vitripennis

    Nasonia vitripennis

    • Public DB hit
      GI:156549330
      XP_001601074
    • Hit length
      671 aa
    • E Value
      6.14E0
    • BLAST Score
      33.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001601074
      1.34% cov
    • Alignment Length
      9 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:206189
      AAA41875
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      673 aa
    • E Value
      6.14E0
    • BLAST Score
      33.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAA41875
      1.34% cov
    • Alignment Length
      9 aa
  • Protopterus dolloi

    Protopterus dolloi

    • Public DB hit
      GI:44965824
      AAS49544
    • Hit length
      413 aa
    • E Value
      6.43E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAS49544
      2.18% cov
    • Alignment Length
      9 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:126335173
      XP_001363152
      1 of 4 hits reported for Monodelphis domestica.
    • Hit length
      670 aa
    • E Value
      6.73E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001363152
      1.34% cov
    • Alignment Length
      9 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:156119421
      NP_001095193
      1 of 4 hits reported for Oryctolagus cuniculus.
    • Hit length
      673 aa
    • E Value
      6.73E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001095193
      1.34% cov
    • Alignment Length
      9 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:148685333
      EDL17280
      1 of 4 hits reported for Mus musculus.
    • Hit length
      638 aa
    • E Value
      6.73E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      EDL17280
      1.41% cov
    • Alignment Length
      9 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332845545
      XP_003315067
    • Hit length
      670 aa
    • E Value
      7.05E0
    • BLAST Score
      33.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003315067
      1.34% cov
    • Alignment Length
      9 aa
Occurrence
63 times in PatSeqDB
Tools
SEQ ID NO
6
Length
13
Sequence Type
peptide
Locations
Undetermined
Declared organism
Homo sapiens
Determined organism
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:189034302
      ACD75133
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      101 aa
    • E Value
      1.36E3
    • BLAST Score
      26.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ACD75133
      12.87% cov
    • Alignment Length
      13 aa
    • CIGAR string
      13M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
2070 times in PatSeqDB
Tools
SEQ ID NO
7
Length
19
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:238018085
      NG_012206
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      514,937 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NG_012206
      0% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332848862
      XM_003315686
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      8,953 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003315686
      0.21% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332239295
      XM_003268794
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      8,637 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003268794
      0.22% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301772683
      XM_002921719
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,025 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002921719
      0.94% cov
    • Alignment Length
      19 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297701580
      XR_095416
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,344 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XR_095416
      0.81% cov
    • Alignment Length
      19 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296202976
      XM_002748655
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,174 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002748655
      0.87% cov
    • Alignment Length
      19 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:164663790
      NM_011101
    • Hit length
      8,385 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_011101
      0.23% cov
    • Alignment Length
      19 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:157786689
      NM_001105713
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      3,702 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001105713
      0.51% cov
    • Alignment Length
      19 bp
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149635079
      XM_001510047
    • Hit length
      2,028 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_001510047
      0.94% cov
    • Alignment Length
      19 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:156119422
      NM_001101724
    • Hit length
      2,841 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001101724
      0.67% cov
    • Alignment Length
      19 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:27806088
      NM_174435
    • Hit length
      2,324 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_174435
      0.82% cov
    • Alignment Length
      19 bp
  • Plutella xylostella

    Plutella xylostella

    • Public DB hit
      GI:315319166
      HQ620620
    • Hit length
      2,019 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      HQ620620
      0.94% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261858651
      AB527684
      1 of 3 hits reported for synthetic construct.
    • Hit length
      2,033 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB527684
      0.93% cov
    • Alignment Length
      19 bp
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
8
Length
19
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:238018085
      NG_012206
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      514,937 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NG_012206
      0% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332239295
      XM_003268794
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      8,637 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003268794
      0.22% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297701581
      XM_002827744
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,247 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002827744
      0.85% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296202976
      XM_002748655
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,174 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002748655
      0.87% cov
    • Alignment Length
      19 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194216738
      XM_001494589
      1 of 2 hits reported for Equus caballus.
    • Hit length
      2,028 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_001494589
      0.94% cov
    • Alignment Length
      19 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:164663790
      NM_011101
      1 of 5 hits reported for Mus musculus.
    • Hit length
      8,385 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_011101
      0.23% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261858651
      AB527684
      1 of 2 hits reported for synthetic construct.
    • Hit length
      2,033 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AB527684
      0.93% cov
    • Alignment Length
      19 bp
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
9
Length
19
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:238018085
      NG_012206
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      514,937 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NG_012206
      0% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332848862
      XM_003315686
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      8,953 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003315686
      0.21% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332239295
      XM_003268794
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      8,637 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003268794
      0.22% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297701580
      XR_095416
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,344 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XR_095416
      0.81% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297273436
      XM_002800569
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,181 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002800569
      0.6% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261858651
      AB527684
      1 of 4 hits reported for synthetic construct.
    • Hit length
      2,033 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AB527684
      0.93% cov
    • Alignment Length
      19 bp
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
10
Length
19
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335285553
      XM_003354843
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      660 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003354843
      2.88% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332813073
      XM_003308992
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      5,668 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003308992
      0.34% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227345
      XM_003262805
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      5,871 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003262805
      0.32% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301753233
      XM_002912411
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,334 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002912411
      0.81% cov
    • Alignment Length
      19 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297667711
      XM_002812068
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      6,042 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002812068
      0.31% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297265927
      XM_001112763
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      5,873 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001112763
      0.32% cov
    • Alignment Length
      19 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296223955
      XM_002757781
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      4,192 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002757781
      0.45% cov
    • Alignment Length
      19 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:162287147
      NM_001111120
      1 of 2 hits reported for Bos taurus.
    • Hit length
      5,491 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001111120
      0.35% cov
    • Alignment Length
      19 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73969529
      XM_846768
    • Hit length
      2,217 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_846768
      0.86% cov
    • Alignment Length
      19 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:47157326
      NM_005400
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      5,537 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_005400
      0.34% cov
    • Alignment Length
      19 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:39930372
      NM_017171
    • Hit length
      2,704 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_017171
      0.7% cov
    • Alignment Length
      19 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:126723240
      NM_001082274
    • Hit length
      2,750 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001082274
      0.69% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168279092
      AB385570
    • Hit length
      2,228 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AB385570
      0.85% cov
    • Alignment Length
      19 bp
Occurrence
4 times in PatSeqDB
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