Method For Creating Polynucleotide And Polypeptide Sequences

  • Published: Jan 5, 2011
  • Earliest Priority: Dec 08 1997
  • Family: 24
  • Cited Works: 105
  • Cited by: 0
  • Cites: 18
  • Sequences: 11
  • Additional Info: Cited Works
Data obtained from: NCBI GenBank (EBI) EMBL-EBI Pat DDBJ Pat
11 sequences found in this patent (in total)

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Download sequences in fasta format: 4 peptides 7 DNAs

Displaying 1 - 10 of 11 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
410
Sequence Type
peptide
Locations
Fulltext
Declared organism
Bradyrhizobium lupini
Determined organism
  • Agrobacterium sp. H13-3

    Agrobacterium sp. H13-3

    • Public DB hit
      GI:325291932
      YP_004277796
      1 of 3 hits reported for Agrobacterium sp. H13-3.
    • Hit length
      410 aa
    • E Value
      0E0
    • BLAST Score
      673.7 bits
    • Similarity
      89.13%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_004277796
      100% cov
    • Alignment Length
      414 aa
    • CIGAR string
      241M10N4INM7NM6NM27NM4D110M mismatches: 51 - insertions: 4 - deletions: 4
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
2
Length
394
Sequence Type
peptide
Locations
Fulltext
Declared organism
Sinorhizobium meliloti
Determined organism
  • Sinorhizobium meliloti 1021

    Sinorhizobium meliloti 1021

    • Public DB hit
      GI:15964422
      NP_384775
      1 of 3 hits reported for Sinorhizobium meliloti 1021.
    • Hit length
      394 aa
    • E Value
      0E0
    • BLAST Score
      772.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_384775
      100% cov
    • Alignment Length
      394 aa
    • CIGAR string
      394M mismatches: 0 - insertions: 0 - deletions: 0
  • Sinorhizobium meliloti AK83

    Sinorhizobium meliloti AK83

    • Public DB hit
      GI:334315124
      YP_004547743
      1 of 3 hits reported for Sinorhizobium meliloti AK83.
    • Hit length
      395 aa
    • E Value
      2.1E-165
    • BLAST Score
      587 bits
    • Similarity
      85.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_004547743
      100% cov
    • Alignment Length
      402 aa
  • Sinorhizobium meliloti

    Sinorhizobium meliloti

    • Public DB hit
      GI:13124736
      P13118
      1 of 4 hits reported for Sinorhizobium meliloti.
    • Hit length
      395 aa
    • E Value
      3.29E-165
    • BLAST Score
      586.6 bits
    • Similarity
      85.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      P13118
      100% cov
    • Alignment Length
      402 aa
  • Sinorhizobium medicae WSM419

    Sinorhizobium medicae WSM419

    • Public DB hit
      GI:150395492
      YP_001325959
      1 of 3 hits reported for Sinorhizobium medicae WSM419.
    • Hit length
      395 aa
    • E Value
      4.48E-165
    • BLAST Score
      586.3 bits
    • Similarity
      85.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_001325959
      100% cov
    • Alignment Length
      402 aa
Occurrence
23 times in PatSeqDB
Tools
SEQ ID NO
3
Length
1,201
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Sinorhizobium meliloti SM11

    Sinorhizobium meliloti SM11

    • Public DB hit
      GI:336031356
      CP001830
    • Hit length
      3,908,022 bp
    • E Value
      0E0
    • BLAST Score
      660.4 bits
    • Similarity
      83.14%
    • Coverage
      62.11%
    • Alignment (schematic)

      SEQ ID NO 3
      62.11% cov
      CP001830
      0.02% cov
    • Alignment Length
      765 bp
    • CIGAR string
      6H3MN7MN3MIMNMDN7MNMN2MNMI3MD9MN5MN7MN12MN8MN2MN3M2N4MNMN5MN8MN14MN2MN5MN2MN17MN5M2D2M2INMN5MN2MN2MN5MN2M2NMN8MN11MN8MNM3NMN7MI2MD3M2N5MN2MN2MN3MNMN6M2N3MN2MN2MDMI103MN8MI2MD2MD2MIMN2M2NIM2IMNI2MN2MN2MD4MIMNMD2MN2MN5MN5MN5MNM3I5MN5MNMN7M3N8MI2MD2MN5M3NM2N6M2NMN2MN2M2DMDMN2D3MDMN2DMND77MN3MDMNMN2MIMND2MI104MN11M449H mismatches: 88 - insertions: 19 - deletions: 22
  • Sinorhizobium meliloti AK83

    Sinorhizobium meliloti AK83

    • Public DB hit
      GI:334093764
      CP002781
    • Hit length
      3,820,344 bp
    • E Value
      0E0
    • BLAST Score
      660.4 bits
    • Similarity
      83.12%
    • Coverage
      62.11%
    • Alignment (schematic)

      SEQ ID NO 3
      62.11% cov
      CP002781
      0.02% cov
    • Alignment Length
      764 bp
  • Sinorhizobium meliloti

    Sinorhizobium meliloti

    • Public DB hit
      GI:12057222
      L49337
      1 of 2 hits reported for Sinorhizobium meliloti.
    • Hit length
      19,824 bp
    • E Value
      0E0
    • BLAST Score
      660.4 bits
    • Similarity
      83.14%
    • Coverage
      62.11%
    • Alignment (schematic)

      SEQ ID NO 3
      62.11% cov
      L49337
      3.75% cov
    • Alignment Length
      765 bp
  • Sinorhizobium medicae WSM419

    Sinorhizobium medicae WSM419

    • Public DB hit
      GI:150026743
      CP000738
    • Hit length
      3,781,904 bp
    • E Value
      1.69E-162
    • BLAST Score
      582.8 bits
    • Similarity
      81.31%
    • Coverage
      62.11%
    • Alignment (schematic)

      SEQ ID NO 3
      62.11% cov
      CP000738
      0.02% cov
    • Alignment Length
      765 bp
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
4
Length
1,229
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Agrobacterium sp. H13-3

    Agrobacterium sp. H13-3

    • Public DB hit
      GI:325059306
      CP002248
      1 of 2 hits reported for Agrobacterium sp. H13-3.
    • Hit length
      2,823,930 bp
    • E Value
      0E0
    • BLAST Score
      1,000.2 bits
    • Similarity
      81.98%
    • Coverage
      99.51%
    • Alignment (schematic)

      SEQ ID NO 4
      99.51% cov
      CP002248
      0.04% cov
    • Alignment Length
      1,265 bp
    • CIGAR string
      6H3MN7MN3MDMNMIN7MNMN2MNMD2MDMN2MIMI4MN5MN7MN12MN8MN2MN3M2N4MNMN5MN8MN14MN2MN5MN2MN17MN5M2DNMNMIMI5MN2MN2MN5MN2M2NMN8MN11MN8MNM3NMN7MD2MI3M2N5MN2MN2MN3MNMN122MN8MDMIMI3MD2MN2MD2NM2DMDN2MN2MNMI5MDMNMI2MN2MN5MN5MN5M3DMN5MN5MNMN7M3N238MI68MIM2NDMNMNMN2MD4M2NDMIMI5MNI2MD2MIMN2M2IMN9M2ND2MI4MNMNMNMD2MNIMNMN2MD2MI4MNMI2MIMDM2NMN2MN2MIM2D2MNMN3M4I2M2NI2MI8MDMI2MN3M2NM2N2MIMI3MDMD2MN53MN4MN7MN3MDMDM2I8MN3M2NIMND9MN6MDMNI2MN2MNMDM2NMI5M2NI2MD2MNM2N3MIM3N2M3NMD11MN2MN2MN8MN2MN5MN2M2NI2MNMD5MN2MN5MN11MN2MN6MNMN2MN2MN5MN3MNI2MD11MNMN8MN5MN3M mismatches: 148 - insertions: 42 - deletions: 38
  • Rhizobium lupini

    Rhizobium lupini

    • Public DB hit
      GI:10281321
      AY007305
    • Hit length
      1,233 bp
    • E Value
      0E0
    • BLAST Score
      1,000.2 bits
    • Similarity
      81.98%
    • Coverage
      99.51%
    • Alignment (schematic)

      SEQ ID NO 4
      99.51% cov
      AY007305
      99.51% cov
    • Alignment Length
      1,265 bp
    • CIGAR string
      6H3MN7MN3MDMNMIN7MNMN2MNMD2MDMN2MIMI4MN5MN7MN12MN8MN2MN3M2N4MNMN5MN8MN14MN2MN5MN2MN17MN5M2DNMNMIMI5MN2MN2MN5MN2M2NMN8MN11MN8MNM3NMN7MD2MI3M2N5MN2MN2MN3MNMN122MN8MDMIMI3MD2MN2MD2NM2DMDN2MN2MNMI5MDMNMI2MN2MN5MN5MN5M3DMN5MN5MNMN7M3N238MI68MIM2NDMNMNMN2MD4M2NDMIMI5MNI2MD2MIMN2M2IMN9M2ND2MI4MNMNMNMD2MNIMNMN2MD2MI4MNMI2MIMDM2NMN2MN2MIM2D2MNMN3M4I2M2NI2MI8MDMI2MN3M2NM2N2MIMI3MDMD2MN53MN4MN7MN3MDMDM2I8MN3M2NIMND9MN6MDMNI2MN2MNMDM2NMI5M2NI2MD2MNM2N3MIM3N2M3NMD11MN2MN2MN8MN2MN5MN2M2NI2MNMD5MN2MN5MN11MN2MN6MNMN2MN2MN5MN3MNI2MD11MNMN8MN5MN3M mismatches: 148 - insertions: 42 - deletions: 38
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
5
Length
1,228
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
6
Length
1,209
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
7
Length
4,039
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Actinoplanes utahensis

    Actinoplanes utahensis

    • Public DB hit
      GI:216212
      D10610
    • Hit length
      2,958 bp
    • E Value
      0E0
    • BLAST Score
      5,325 bits
    • Similarity
      99.12%
    • Coverage
      73.38%
    • Alignment (schematic)

      SEQ ID NO 7
      73.38% cov
      D10610
      100% cov
    • Alignment Length
      2,970 bp
    • CIGAR string
      1075H356MN67MD12MD5MD64MDMI212MN175MN80MN214MN633MN153M3D56MI10MI3MI41MD38MI636MIMD69MDMN8MD6MN31MD72M mismatches: 8 - insertions: 6 - deletions: 12
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
8
Length
787
Sequence Type
peptide
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Actinoplanes utahensis

    Actinoplanes utahensis

    • Public DB hit
      GI:302698864
      BAJ14711
      1 of 2 hits reported for Actinoplanes utahensis.
    • Hit length
      787 aa
    • E Value
      0E0
    • BLAST Score
      1,570.1 bits
    • Similarity
      99.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      BAJ14711
      100% cov
    • Alignment Length
      787 aa
    • CIGAR string
      N193MN64MN26MN71MN210MN48MN12MN155M mismatches: 8 - insertions: 0 - deletions: 0
  • Salinispora arenicola CNS-205

    Salinispora arenicola CNS-205

    • Public DB hit
      GI:159037668
      YP_001536921
    • Hit length
      779 aa
    • E Value
      0E0
    • BLAST Score
      1,100.1 bits
    • Similarity
      79.34%
    • Coverage
      99.62%
    • Alignment (schematic)

      SEQ ID NO 8
      99.62% cov
      YP_001536921
      99.87% cov
    • Alignment Length
      784 aa
    • CIGAR string
      3HM2N2MN3M3NM3NM3NMD7N2MN2MN3MN11MN2MN5MN2MN7MN3M2N2M4N6MN3D4NMN2MN2MN5MN6MN10M2N4MN8M2NM2D6N5MN2MN4MN2MNMN2M2NM2N4MN4MN11MNM6N2MNMNM3N4M2N2MN8M3NM2NMNM2N8MN2MN20MN3MNMN4M3N17MN9M2N3M3NMN8M2N6M2N2M2N3MNMN2MN4M2N7MN2MN4MN4MN2MNM2NM2NMN5MN12M2NMN3MN9M2N11MN15MNMN2MN4MN8MN2M3NMN9MN3MNM2N4MN2M2NMN3MN8M2NM2N5MN10M2N2MN2MN3M2NMN2MN5M2NM2N2MN2MNMN2MN7MN2M3NMNM2N17MN4MNM2NMNM2N2MN2M3N2M2N9MN2MN5MN3M2NM2N2M3N7MN3MN2MNM6N5MNMN5MN6M2N6MN3MN2MN11MN3MN7MNM2NM2N5M2N3M4NM mismatches: 231 - insertions: 0 - deletions: 6
  • Salinispora tropica CNB-440

    Salinispora tropica CNB-440

    • Public DB hit
      GI:145596290
      YP_001160587
    • Hit length
      779 aa
    • E Value
      0E0
    • BLAST Score
      1,071.6 bits
    • Similarity
      78.82%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 8
      98.98% cov
      YP_001160587
      99.23% cov
    • Alignment Length
      779 aa
Occurrence
13 times in PatSeqDB
Tools
SEQ ID NO
9
Length
21
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Culex quinquefasciatus

    Culex quinquefasciatus

    • Public DB hit
      GI:170052793
      XM_001862348
    • Hit length
      827 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_001862348
      2.54% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pAW8ENdeI-C3HA

    Cloning vector pAW8ENdeI-C3HA

    • Public DB hit
      GI:336089660
      JF340118
    • Hit length
      8,433 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF340118
      0.25% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pAW8ENdeI-CTAP

    Cloning vector pAW8ENdeI-CTAP

    • Public DB hit
      GI:336089658
      JF340117
    • Hit length
      8,892 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF340117
      0.24% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pAW8ENdeI-cyEGFP

    Cloning vector pAW8ENdeI-cyEGFP

    • Public DB hit
      GI:336089656
      JF340116
    • Hit length
      9,057 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF340116
      0.23% cov
    • Alignment Length
      21 bp
  • Cloning vector pAW8ENdeI

    Cloning vector pAW8ENdeI

    • Public DB hit
      GI:336089653
      JF340115
    • Hit length
      8,289 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF340115
      0.25% cov
    • Alignment Length
      21 bp
  • Gene deletion vector pEMG

    Gene deletion vector pEMG

    • Public DB hit
      GI:335893243
      JF965437
    • Hit length
      3,168 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF965437
      0.66% cov
    • Alignment Length
      21 bp
  • Cloning vector pBOB

    Cloning vector pBOB

    • Public DB hit
      GI:335355349
      JF927991
    • Hit length
      8,730 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF927991
      0.24% cov
    • Alignment Length
      21 bp
  • Expression vector pLoxGentrc

    Expression vector pLoxGentrc

    • Public DB hit
      GI:334265229
      JF934954
    • Hit length
      6,295 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF934954
      0.33% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV34

    Cloning vector pPLV34

    • Public DB hit
      GI:334085873
      JF909487
    • Hit length
      5,606 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909487
      0.37% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV33

    Cloning vector pPLV33

    • Public DB hit
      GI:334085870
      JF909486
    • Hit length
      5,251 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909486
      0.4% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV32

    Cloning vector pPLV32

    • Public DB hit
      GI:334085867
      JF909485
    • Hit length
      4,898 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909485
      0.43% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV31

    Cloning vector pPLV31

    • Public DB hit
      GI:334085864
      JF909484
    • Hit length
      9,507 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909484
      0.22% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV30

    Cloning vector pPLV30

    • Public DB hit
      GI:334085861
      JF909483
    • Hit length
      9,152 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909483
      0.23% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV29

    Cloning vector pPLV29

    • Public DB hit
      GI:334085858
      JF909482
    • Hit length
      8,799 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909482
      0.24% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV28

    Cloning vector pPLV28

    • Public DB hit
      GI:334085855
      JF909481
    • Hit length
      6,389 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909481
      0.33% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV27

    Cloning vector pPLV27

    • Public DB hit
      GI:334085852
      JF909480
    • Hit length
      6,750 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909480
      0.31% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV26

    Cloning vector pPLV26

    • Public DB hit
      GI:334085849
      JF909479
    • Hit length
      6,395 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909479
      0.33% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV25

    Cloning vector pPLV25

    • Public DB hit
      GI:334085846
      JF909478
    • Hit length
      6,042 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909478
      0.35% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV24

    Cloning vector pPLV24

    • Public DB hit
      GI:334085842
      JF909477
    • Hit length
      6,862 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909477
      0.31% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV23

    Cloning vector pPLV23

    • Public DB hit
      GI:334085838
      JF909476
    • Hit length
      6,507 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909476
      0.32% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV22

    Cloning vector pPLV22

    • Public DB hit
      GI:334085834
      JF909475
    • Hit length
      6,154 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909475
      0.34% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV21

    Cloning vector pPLV21

    • Public DB hit
      GI:334085830
      JF909474
    • Hit length
      6,151 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909474
      0.34% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV20

    Cloning vector pPLV20

    • Public DB hit
      GI:334085826
      JF909473
    • Hit length
      5,797 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909473
      0.36% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV19

    Cloning vector pPLV19

    • Public DB hit
      GI:334085822
      JF909472
    • Hit length
      5,443 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909472
      0.39% cov
    • Alignment Length
      21 bp
  • Cloning vector pPLV18

    Cloning vector pPLV18

    • Public DB hit
      GI:334085818
      JF909471
    • Hit length
      6,151 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF909471
      0.34% cov
    • Alignment Length
      21 bp
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
10
Length
22
Sequence Type
DNA
Locations
Fulltext
Declared organism
Artificial
Determined organism
  • Cloning vector pFA-pHluorin-ARG4

    Cloning vector pFA-pHluorin-ARG4

    • Public DB hit
      GI:336287747
      JN051501
    • Hit length
      5,412 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JN051501
      0.41% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pFA-pHluorin-URA3

    Cloning vector pFA-pHluorin-URA3

    • Public DB hit
      GI:336287744
      JN051500
    • Hit length
      4,803 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JN051500
      0.46% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pFA-LIFEACT-GFP-URA3

    Cloning vector pFA-LIFEACT-GFP-URA3

    • Public DB hit
      GI:336287741
      JN051499
    • Hit length
      5,074 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JN051499
      0.43% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pFA-TagRFP-T-CdHIS1

    Cloning vector pFA-TagRFP-T-CdHIS1

    • Public DB hit
      GI:336287738
      JN051498
    • Hit length
      4,627 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JN051498
      0.48% cov
    • Alignment Length
      22 bp
  • Cloning vector pFA-TagRFP-T-CmLEU2

    Cloning vector pFA-TagRFP-T-CmLEU2

    • Public DB hit
      GI:336287735
      JN051497
    • Hit length
      4,822 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JN051497
      0.46% cov
    • Alignment Length
      22 bp
  • Cloning vector pFA-TagRFP-T-ARG4

    Cloning vector pFA-TagRFP-T-ARG4

    • Public DB hit
      GI:336287732
      JN051496
    • Hit length
      5,433 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JN051496
      0.4% cov
    • Alignment Length
      22 bp
  • Cloning vector pFA-TagRFP-T-URA3

    Cloning vector pFA-TagRFP-T-URA3

    • Public DB hit
      GI:336287729
      JN051495
    • Hit length
      4,824 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JN051495
      0.46% cov
    • Alignment Length
      22 bp
  • Cloning vector pAW8ENdeI-C3HA

    Cloning vector pAW8ENdeI-C3HA

    • Public DB hit
      GI:336089660
      JF340118
    • Hit length
      8,433 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF340118
      0.26% cov
    • Alignment Length
      22 bp
  • Cloning vector pAW8ENdeI-CTAP

    Cloning vector pAW8ENdeI-CTAP

    • Public DB hit
      GI:336089658
      JF340117
    • Hit length
      8,892 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF340117
      0.25% cov
    • Alignment Length
      22 bp
  • Cloning vector pAW8ENdeI-cyEGFP

    Cloning vector pAW8ENdeI-cyEGFP

    • Public DB hit
      GI:336089656
      JF340116
    • Hit length
      9,057 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF340116
      0.24% cov
    • Alignment Length
      22 bp
  • Cloning vector pAW8ENdeI

    Cloning vector pAW8ENdeI

    • Public DB hit
      GI:336089653
      JF340115
    • Hit length
      8,289 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF340115
      0.27% cov
    • Alignment Length
      22 bp
  • Cloning vector pTrypRNAiGate

    Cloning vector pTrypRNAiGate

    • Public DB hit
      GI:334854400
      JF748716
    • Hit length
      9,177 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF748716
      0.24% cov
    • Alignment Length
      22 bp
  • Baculovirus shuttle vector pBacHTS

    Baculovirus shuttle vector pBacHTS

    • Public DB hit
      GI:334847646
      JN029539
    • Hit length
      6,205 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JN029539
      0.35% cov
    • Alignment Length
      22 bp
  • Expression vector pLoxGentrc

    Expression vector pLoxGentrc

    • Public DB hit
      GI:334265229
      JF934954
    • Hit length
      6,295 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF934954
      0.35% cov
    • Alignment Length
      22 bp
  • Cloning vector pDC-KHT

    Cloning vector pDC-KHT

    • Public DB hit
      GI:333805711
      JF430587
    • Hit length
      6,458 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF430587
      0.34% cov
    • Alignment Length
      22 bp
  • Cloning vector pDC-KHGT

    Cloning vector pDC-KHGT

    • Public DB hit
      GI:333805710
      JF430586
    • Hit length
      7,173 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF430586
      0.31% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:333610205
      JF495130
    • Hit length
      7,348 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF495130
      0.3% cov
    • Alignment Length
      22 bp
  • Expression vector LIC-pIVEX-LC2

    Expression vector LIC-pIVEX-LC2

    • Public DB hit
      GI:332650939
      JF327845
    • Hit length
      5,236 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF327845
      0.42% cov
    • Alignment Length
      22 bp
  • Expression vector LIC-pIVEX-LC1

    Expression vector LIC-pIVEX-LC1

    • Public DB hit
      GI:332650937
      JF327844
    • Hit length
      5,250 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      JF327844
      0.42% cov
    • Alignment Length
      22 bp
  • Expression vector XNWT_GW

    Expression vector XNWT_GW

    • Public DB hit
      GI:331687744
      HQ700955
    • Hit length
      8,842 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      HQ700955
      0.25% cov
    • Alignment Length
      22 bp
  • Expression vector NWTX_GW

    Expression vector NWTX_GW

    • Public DB hit
      GI:331687739
      HQ700954
    • Hit length
      8,840 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      HQ700954
      0.25% cov
    • Alignment Length
      22 bp
  • Expression vector NX32_GW

    Expression vector NX32_GW

    • Public DB hit
      GI:331687729
      HQ700952
    • Hit length
      8,899 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      HQ700952
      0.25% cov
    • Alignment Length
      22 bp
  • Expression vector XN21_GW

    Expression vector XN21_GW

    • Public DB hit
      GI:331687724
      HQ700951
    • Hit length
      8,919 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      HQ700951
      0.25% cov
    • Alignment Length
      22 bp
  • Expression vector XN22_GW

    Expression vector XN22_GW

    • Public DB hit
      GI:331687720
      HQ646606
    • Hit length
      8,842 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      HQ646606
      0.25% cov
    • Alignment Length
      22 bp
  • Gateway vector pcYGW

    Gateway vector pcYGW

    • Public DB hit
      GI:332144932
      AB626696
    • Hit length
      6,192 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AB626696
      0.36% cov
    • Alignment Length
      22 bp
Occurrence
11 times in PatSeqDB
Tools

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