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Search for Biological Sequences disclosed in Patents

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Data obtained from: USPTO Fulltext
44 sequences found in this patent (in total)

Displaying 1 - 10 of 44 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
297
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Nicotiana alata (NaCys1)

Determined organism:
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:124222061
      AK224655
      1 of 3 hits reported for Solanum lycopersicum.
    • Hit length
      560 bp
    • E Value
      4.1E-118
    • BLAST Score
      433.2 bits
    • Similarity
      92.95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AK224655
      53.04% cov
    • Alignment Length
      298 bp
    • CIGAR string
      5MN3MN16MN2MN2MN5MN2MN5MN2MN8MN11MN20MN32MN53MN5MN35MN14MN18MI3MD25MN4MN7M mismatches: 19 - insertions: 1 - deletions: 1
  • Solanum pennellii

    Solanum pennellii

    • Public DB hit
      GI:225581220
      FJ809742
    • Hit length
      100,367 bp
    • E Value
      9.32E-80
    • BLAST Score
      305.8 bits
    • Similarity
      94.47%
    • Coverage
      66.67%
    • Alignment (schematic)

      SEQ ID NO 1
      66.67% cov
      FJ809742
      0.2% cov
    • Alignment Length
      199 bp
  • Glycine max

    Glycine max

    • Public DB hit
      GI:255625592
      BT089060
      1 of 3 hits reported for Glycine max.
    • Hit length
      723 bp
    • E Value
      7.85E-21
    • BLAST Score
      110.1 bits
    • Similarity
      77.66%
    • Coverage
      64.31%
    • Alignment (schematic)

      SEQ ID NO 1
      64.31% cov
      BT089060
      26.42% cov
    • Alignment Length
      197 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
98
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Nicotiana alata (NaCys1)

Determined organism:
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:6671194
      AAF23127
    • Hit length
      94 aa
    • E Value
      2.64E-46
    • BLAST Score
      189.1 bits
    • Similarity
      100%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 2
      95.92% cov
      AAF23127
      100% cov
    • Alignment Length
      94 aa
    • CIGAR string
      4H81MN10MNM mismatches: 2 - insertions: 0 - deletions: 0
  • Rumex obtusifolius

    Rumex obtusifolius

    • Public DB hit
      GI:18307510
      CAD21441
    • Hit length
      99 aa
    • E Value
      2.17E-37
    • BLAST Score
      159.5 bits
    • Similarity
      87.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CAD21441
      98.99% cov
    • Alignment Length
      98 aa
    • CIGAR string
      3MN3M4N2MN4M3N2MN3M2N7MN3MN4MN17MN5MN10MN4M3N3MN2M2NMN mismatches: 25 - insertions: 0 - deletions: 0
  • Aegiceras corniculatum

    Aegiceras corniculatum

    • Public DB hit
      GI:42600879
      AAS21216
    • Hit length
      95 aa
    • E Value
      5.13E-35
    • BLAST Score
      151.4 bits
    • Similarity
      88.42%
    • Coverage
      96.94%
    • Alignment (schematic)

      SEQ ID NO 2
      96.94% cov
      AAS21216
      100% cov
    • Alignment Length
      95 aa
    • CIGAR string
      2M2N3MNM2N2MN2MNM3N7MN11MN10MN2MN8MN2MN2MN10MN3MNMN2MNM2N2M3H mismatches: 23 - insertions: 0 - deletions: 0
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225435931
      XP_002268378
      1 of 2 hits reported for Vitis vinifera.
    • Hit length
      124 aa
    • E Value
      1.68E-34
    • BLAST Score
      149.8 bits
    • Similarity
      88.3%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 2
      95.92% cov
      XP_002268378
      75.81% cov
    • Alignment Length
      94 aa
  • Dianthus caryophyllus

    Dianthus caryophyllus

    • Public DB hit
      GI:13603389
      AAK30004
    • Hit length
      98 aa
    • E Value
      2.5E-34
    • BLAST Score
      149.4 bits
    • Similarity
      89.8%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 2
      98.98% cov
      AAK30004
      100% cov
    • Alignment Length
      98 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255564458
      XP_002523225
    • Hit length
      101 aa
    • E Value
      2.65E-34
    • BLAST Score
      149.1 bits
    • Similarity
      85.57%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 2
      98.98% cov
      XP_002523225
      96.04% cov
    • Alignment Length
      97 aa
  • Spinacia oleracea

    Spinacia oleracea

    • Public DB hit
      GI:226235246
      BAH47556
    • Hit length
      104 aa
    • E Value
      2.91E-34
    • BLAST Score
      149.1 bits
    • Similarity
      87.37%
    • Coverage
      96.94%
    • Alignment (schematic)

      SEQ ID NO 2
      96.94% cov
      BAH47556
      91.35% cov
    • Alignment Length
      95 aa
  • Hevea brasiliensis

    Hevea brasiliensis

    • Public DB hit
      GI:268321205
      ACZ02398
    • Hit length
      101 aa
    • E Value
      4.57E-34
    • BLAST Score
      148.3 bits
    • Similarity
      86.6%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 2
      98.98% cov
      ACZ02398
      96.04% cov
    • Alignment Length
      97 aa
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224054226
      XP_002298154
      1 of 3 hits reported for Populus trichocarpa.
    • Hit length
      101 aa
    • E Value
      1.78E-33
    • BLAST Score
      146.4 bits
    • Similarity
      84.54%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 2
      98.98% cov
      XP_002298154
      96.04% cov
    • Alignment Length
      97 aa
  • Glycine max

    Glycine max

    • Public DB hit
      GI:1944319
      BAA19608
      1 of 3 hits reported for Glycine max.
    • Hit length
      245 aa
    • E Value
      1.01E-32
    • BLAST Score
      144.1 bits
    • Similarity
      84.54%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 2
      98.98% cov
      BAA19608
      39.59% cov
    • Alignment Length
      97 aa
  • Vigna unguiculata

    Vigna unguiculata

    • Public DB hit
      GI:1169196
      Q06445
    • Hit length
      97 aa
    • E Value
      1.2E-32
    • BLAST Score
      143.7 bits
    • Similarity
      86.6%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 2
      98.98% cov
      Q06445
      100% cov
    • Alignment Length
      97 aa
  • Jatropha curcas

    Jatropha curcas

    • Public DB hit
      GI:282848226
      ADB02894
    • Hit length
      106 aa
    • E Value
      1.74E-32
    • BLAST Score
      143.3 bits
    • Similarity
      85.57%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 2
      98.98% cov
      ADB02894
      91.51% cov
    • Alignment Length
      97 aa
  • Populus tomentosa

    Populus tomentosa

    • Public DB hit
      GI:65306458
      AAY41807
    • Hit length
      143 aa
    • E Value
      2.34E-32
    • BLAST Score
      142.9 bits
    • Similarity
      84.04%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 2
      95.92% cov
      AAY41807
      65.73% cov
    • Alignment Length
      94 aa
  • Knorringia sibirica

    Knorringia sibirica

    • Public DB hit
      GI:290889339
      ADD69946
    • Hit length
      111 aa
    • E Value
      2.46E-32
    • BLAST Score
      142.5 bits
    • Similarity
      82.65%
    • Coverage
      97.96%
    • Alignment (schematic)

      SEQ ID NO 2
      97.96% cov
      ADD69946
      88.29% cov
    • Alignment Length
      98 aa
  • Populus balsamifera

    Populus balsamifera

    • Public DB hit
      GI:226231530
      ACO39758
    • Hit length
      127 aa
    • E Value
      3.16E-32
    • BLAST Score
      142.1 bits
    • Similarity
      84.04%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 2
      95.92% cov
      ACO39758
      74.02% cov
    • Alignment Length
      94 aa
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
297
Type
nucleotide
Locations
Detailed Description

Declared organism:
Nicotiana alata (NaCys2)

Determined organism:
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:124222061
      AK224655
      1 of 3 hits reported for Solanum lycopersicum.
    • Hit length
      560 bp
    • E Value
      8.94E-110
    • BLAST Score
      405.5 bits
    • Similarity
      91.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AK224655
      53.04% cov
    • Alignment Length
      299 bp
    • CIGAR string
      5MIMN2MD16MN2MN8MN2MN5MN2MN8MN11MN13MN6MN14MN3MN7M2N58MN5MN35MN14MN18MI3MD25M2N3MN7M mismatches: 22 - insertions: 2 - deletions: 2
  • Solanum pennellii

    Solanum pennellii

    • Public DB hit
      GI:225581220
      FJ809742
    • Hit length
      100,367 bp
    • E Value
      2.02E-76
    • BLAST Score
      294.7 bits
    • Similarity
      93.47%
    • Coverage
      66.67%
    • Alignment (schematic)

      SEQ ID NO 3
      66.67% cov
      FJ809742
      0.2% cov
    • Alignment Length
      199 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
98
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Nicotiana alata (NaCys2)

Determined organism:
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:6671194
      AAF23127
    • Hit length
      94 aa
    • E Value
      1.8E-44
    • BLAST Score
      183 bits
    • Similarity
      97.87%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 4
      95.92% cov
      AAF23127
      100% cov
    • Alignment Length
      94 aa
    • CIGAR string
      4H24MN11MN44MN10MNM mismatches: 4 - insertions: 0 - deletions: 0
  • Rumex obtusifolius

    Rumex obtusifolius

    • Public DB hit
      GI:18307510
      CAD21441
    • Hit length
      99 aa
    • E Value
      1.33E-36
    • BLAST Score
      156.8 bits
    • Similarity
      85.71%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CAD21441
      98.99% cov
    • Alignment Length
      98 aa
    • CIGAR string
      2M2N3M4N2MN4M3N2MN3M2N7MN3MN4MN17MN5MN10MN4M3N3MN2M2NMN mismatches: 26 - insertions: 0 - deletions: 0
  • Aegiceras corniculatum

    Aegiceras corniculatum

    • Public DB hit
      GI:42600879
      AAS21216
    • Hit length
      95 aa
    • E Value
      9.12E-35
    • BLAST Score
      150.6 bits
    • Similarity
      87.37%
    • Coverage
      96.94%
    • Alignment (schematic)

      SEQ ID NO 4
      96.94% cov
      AAS21216
      100% cov
    • Alignment Length
      95 aa
    • CIGAR string
      2M2N3MNM2N2MN2MNM3N7MN11MN10MN2MN8MN2MN2MN10MN3MNMN2MNM2N2M3H mismatches: 23 - insertions: 0 - deletions: 0
  • Hevea brasiliensis

    Hevea brasiliensis

    • Public DB hit
      GI:268321205
      ACZ02398
    • Hit length
      101 aa
    • E Value
      2.86E-34
    • BLAST Score
      149.1 bits
    • Similarity
      86.6%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 4
      98.98% cov
      ACZ02398
      96.04% cov
    • Alignment Length
      97 aa
  • Dianthus caryophyllus

    Dianthus caryophyllus

    • Public DB hit
      GI:13603389
      AAK30004
    • Hit length
      98 aa
    • E Value
      5.67E-34
    • BLAST Score
      147.9 bits
    • Similarity
      89.8%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 4
      98.98% cov
      AAK30004
      100% cov
    • Alignment Length
      98 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255564458
      XP_002523225
    • Hit length
      101 aa
    • E Value
      6.32E-34
    • BLAST Score
      147.9 bits
    • Similarity
      84.54%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 4
      98.98% cov
      XP_002523225
      96.04% cov
    • Alignment Length
      97 aa
  • Spinacia oleracea

    Spinacia oleracea

    • Public DB hit
      GI:226235246
      BAH47556
    • Hit length
      104 aa
    • E Value
      1.71E-33
    • BLAST Score
      146.4 bits
    • Similarity
      86.32%
    • Coverage
      96.94%
    • Alignment (schematic)

      SEQ ID NO 4
      96.94% cov
      BAH47556
      91.35% cov
    • Alignment Length
      95 aa
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224054226
      XP_002298154
      1 of 3 hits reported for Populus trichocarpa.
    • Hit length
      101 aa
    • E Value
      4.24E-33
    • BLAST Score
      145.2 bits
    • Similarity
      83.51%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 4
      98.98% cov
      XP_002298154
      96.04% cov
    • Alignment Length
      97 aa
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225435931
      XP_002268378
      1 of 2 hits reported for Vitis vinifera.
    • Hit length
      124 aa
    • E Value
      4.72E-33
    • BLAST Score
      145.2 bits
    • Similarity
      86.17%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 4
      95.92% cov
      XP_002268378
      75.81% cov
    • Alignment Length
      94 aa
  • Jatropha curcas

    Jatropha curcas

    • Public DB hit
      GI:282848226
      ADB02894
    • Hit length
      106 aa
    • E Value
      4.49E-32
    • BLAST Score
      141.7 bits
    • Similarity
      84.54%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 4
      98.98% cov
      ADB02894
      91.51% cov
    • Alignment Length
      97 aa
  • Manihot esculenta

    Manihot esculenta

    • Public DB hit
      GI:8099682
      AAF72202
    • Hit length
      101 aa
    • E Value
      1.31E-31
    • BLAST Score
      140.2 bits
    • Similarity
      83.51%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 4
      98.98% cov
      AAF72202
      96.04% cov
    • Alignment Length
      97 aa
  • Knorringia sibirica

    Knorringia sibirica

    • Public DB hit
      GI:290889339
      ADD69946
    • Hit length
      111 aa
    • E Value
      1.41E-31
    • BLAST Score
      140.2 bits
    • Similarity
      80.61%
    • Coverage
      97.96%
    • Alignment (schematic)

      SEQ ID NO 4
      97.96% cov
      ADD69946
      88.29% cov
    • Alignment Length
      98 aa
  • Glycine max

    Glycine max

    • Public DB hit
      GI:255647357
      ACU24145
      1 of 2 hits reported for Glycine max.
    • Hit length
      245 aa
    • E Value
      3.44E-31
    • BLAST Score
      138.7 bits
    • Similarity
      82.47%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 4
      98.98% cov
      ACU24145
      39.59% cov
    • Alignment Length
      97 aa
  • Castanea sativa

    Castanea sativa

    • Public DB hit
      GI:4150974
      CAA11899
    • Hit length
      102 aa
    • E Value
      6.33E-31
    • BLAST Score
      137.9 bits
    • Similarity
      83.33%
    • Coverage
      97.96%
    • Alignment (schematic)

      SEQ ID NO 4
      97.96% cov
      CAA11899
      94.12% cov
    • Alignment Length
      96 aa
  • Arachis hypogaea

    Arachis hypogaea

    • Public DB hit
      GI:306773390
      CBX19819
    • Hit length
      98 aa
    • E Value
      8.33E-31
    • BLAST Score
      137.5 bits
    • Similarity
      81.63%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CBX19819
      100% cov
    • Alignment Length
      98 aa
  • Populus tomentosa

    Populus tomentosa

    • Public DB hit
      GI:65306458
      AAY41807
    • Hit length
      143 aa
    • E Value
      8.76E-31
    • BLAST Score
      137.5 bits
    • Similarity
      81.91%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 4
      95.92% cov
      AAY41807
      65.73% cov
    • Alignment Length
      94 aa
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
297
Type
peptide
Locations
Detailed Description

Declared organism:
Nicotiana alata (NaCys3)

Determined organism:
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
98
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Nicotiana alata (NaCys3)

Determined organism:
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:6671194
      AAF23127
    • Hit length
      94 aa
    • E Value
      3.1E-46
    • BLAST Score
      188.7 bits
    • Similarity
      100%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 6
      95.92% cov
      AAF23127
      100% cov
    • Alignment Length
      94 aa
    • CIGAR string
      4H81MN10MNM mismatches: 2 - insertions: 0 - deletions: 0
  • Rumex obtusifolius

    Rumex obtusifolius

    • Public DB hit
      GI:18307510
      CAD21441
    • Hit length
      99 aa
    • E Value
      7.52E-37
    • BLAST Score
      157.5 bits
    • Similarity
      86.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CAD21441
      98.99% cov
    • Alignment Length
      98 aa
    • CIGAR string
      2M2N3M4N2MN4M3N2MN3M2N7MN3MN4MN17MN5MN10MN4M3N3MN2M2NMN mismatches: 26 - insertions: 0 - deletions: 0
  • Aegiceras corniculatum

    Aegiceras corniculatum

    • Public DB hit
      GI:42600879
      AAS21216
    • Hit length
      95 aa
    • E Value
      5.09E-35
    • BLAST Score
      151.4 bits
    • Similarity
      88.42%
    • Coverage
      96.94%
    • Alignment (schematic)

      SEQ ID NO 6
      96.94% cov
      AAS21216
      100% cov
    • Alignment Length
      95 aa
    • CIGAR string
      2M2N3MNM2N2MN2MNM3N7MN11MN10MN2MN8MN2MN2MN10MN3MNMN2MNM2N2M3H mismatches: 23 - insertions: 0 - deletions: 0
  • Hevea brasiliensis

    Hevea brasiliensis

    • Public DB hit
      GI:268321205
      ACZ02398
    • Hit length
      101 aa
    • E Value
      5.05E-34
    • BLAST Score
      148.3 bits
    • Similarity
      86.6%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 6
      98.98% cov
      ACZ02398
      96.04% cov
    • Alignment Length
      97 aa
  • Spinacia oleracea

    Spinacia oleracea

    • Public DB hit
      GI:226235246
      BAH47556
    • Hit length
      104 aa
    • E Value
      5.67E-34
    • BLAST Score
      147.9 bits
    • Similarity
      87.37%
    • Coverage
      96.94%
    • Alignment (schematic)

      SEQ ID NO 6
      96.94% cov
      BAH47556
      91.35% cov
    • Alignment Length
      95 aa
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225435931
      XP_002268378
      1 of 2 hits reported for Vitis vinifera.
    • Hit length
      124 aa
    • E Value
      7.59E-34
    • BLAST Score
      147.5 bits
    • Similarity
      87.23%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 6
      95.92% cov
      XP_002268378
      75.81% cov
    • Alignment Length
      94 aa
  • Dianthus caryophyllus

    Dianthus caryophyllus

    • Public DB hit
      GI:13603389
      AAK30004
    • Hit length
      98 aa
    • E Value
      9.67E-34
    • BLAST Score
      147.1 bits
    • Similarity
      88.78%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 6
      98.98% cov
      AAK30004
      100% cov
    • Alignment Length
      98 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255564458
      XP_002523225
    • Hit length
      101 aa
    • E Value
      1.11E-33
    • BLAST Score
      147.1 bits
    • Similarity
      84.54%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 6
      98.98% cov
      XP_002523225
      96.04% cov
    • Alignment Length
      97 aa
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224106634
      XP_002314231
      1 of 3 hits reported for Populus trichocarpa.
    • Hit length
      100 aa
    • E Value
      6.65E-33
    • BLAST Score
      144.4 bits
    • Similarity
      84.95%
    • Coverage
      94.9%
    • Alignment (schematic)

      SEQ ID NO 6
      94.9% cov
      XP_002314231
      93% cov
    • Alignment Length
      93 aa
  • Vigna unguiculata

    Vigna unguiculata

    • Public DB hit
      GI:1169196
      Q06445
    • Hit length
      97 aa
    • E Value
      2.03E-32
    • BLAST Score
      142.9 bits
    • Similarity
      86.6%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 6
      98.98% cov
      Q06445
      100% cov
    • Alignment Length
      97 aa
  • Glycine max

    Glycine max

    • Public DB hit
      GI:1944319
      BAA19608
      1 of 3 hits reported for Glycine max.
    • Hit length
      245 aa
    • E Value
      4E-32
    • BLAST Score
      142.1 bits
    • Similarity
      83.51%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 6
      98.98% cov
      BAA19608
      39.59% cov
    • Alignment Length
      97 aa
  • Jatropha curcas

    Jatropha curcas

    • Public DB hit
      GI:282848226
      ADB02894
    • Hit length
      106 aa
    • E Value
      7.35E-32
    • BLAST Score
      141 bits
    • Similarity
      84.54%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 6
      98.98% cov
      ADB02894
      91.51% cov
    • Alignment Length
      97 aa
  • Knorringia sibirica

    Knorringia sibirica

    • Public DB hit
      GI:290889339
      ADD69946
    • Hit length
      111 aa
    • E Value
      9.44E-32
    • BLAST Score
      140.6 bits
    • Similarity
      81.63%
    • Coverage
      97.96%
    • Alignment (schematic)

      SEQ ID NO 6
      97.96% cov
      ADD69946
      88.29% cov
    • Alignment Length
      98 aa
  • Populus tomentosa

    Populus tomentosa

    • Public DB hit
      GI:65306458
      AAY41807
    • Hit length
      143 aa
    • E Value
      9.6E-32
    • BLAST Score
      140.6 bits
    • Similarity
      82.98%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 6
      95.92% cov
      AAY41807
      65.73% cov
    • Alignment Length
      94 aa
  • Populus balsamifera

    Populus balsamifera

    • Public DB hit
      GI:226231578
      ACO39782
    • Hit length
      127 aa
    • E Value
      1.22E-31
    • BLAST Score
      140.2 bits
    • Similarity
      82.98%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 6
      95.92% cov
      ACO39782
      74.02% cov
    • Alignment Length
      94 aa
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
297
Type
nucleotide
Locations
Detailed Description

Declared organism:
Nicotiana alata (NaCys4)

Determined organism:
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:124222061
      AK224655
      1 of 3 hits reported for Solanum lycopersicum.
    • Hit length
      560 bp
    • E Value
      4.13E-113
    • BLAST Score
      416.6 bits
    • Similarity
      91.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AK224655
      53.04% cov
    • Alignment Length
      299 bp
    • CIGAR string
      5MIMN2MD16MN2MN8MN2MN5MN2MN8MN11MN20MN14MN3MN7MN59MN5MN35MN14M2N17MI3MD25MN4MN7M mismatches: 20 - insertions: 2 - deletions: 2
  • Solanum pennellii

    Solanum pennellii

    • Public DB hit
      GI:225581220
      FJ809742
    • Hit length
      100,367 bp
    • E Value
      4.34E-78
    • BLAST Score
      300.3 bits
    • Similarity
      93.97%
    • Coverage
      66.67%
    • Alignment (schematic)

      SEQ ID NO 7
      66.67% cov
      FJ809742
      0.2% cov
    • Alignment Length
      199 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
98
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Nicotiana alata (NaCys4)

Determined organism:
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:6671194
      AAF23127
    • Hit length
      94 aa
    • E Value
      4.08E-45
    • BLAST Score
      185.3 bits
    • Similarity
      98.94%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 8
      95.92% cov
      AAF23127
      100% cov
    • Alignment Length
      94 aa
    • CIGAR string
      4H75MN5MN10MNM mismatches: 3 - insertions: 0 - deletions: 0
  • Rumex obtusifolius

    Rumex obtusifolius

    • Public DB hit
      GI:18307510
      CAD21441
    • Hit length
      99 aa
    • E Value
      1.04E-35
    • BLAST Score
      153.7 bits
    • Similarity
      85.71%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CAD21441
      98.99% cov
    • Alignment Length
      98 aa
    • CIGAR string
      2M2N3M4N2MN4M3N2MN3M2N7MN3MN4MN17MN5MN9M2N4M3N3MN2M2NMN mismatches: 27 - insertions: 0 - deletions: 0
  • Aegiceras corniculatum

    Aegiceras corniculatum

    • Public DB hit
      GI:42600879
      AAS21216
    • Hit length
      95 aa
    • E Value
      7.41E-34
    • BLAST Score
      147.5 bits
    • Similarity
      87.37%
    • Coverage
      96.94%
    • Alignment (schematic)

      SEQ ID NO 8
      96.94% cov
      AAS21216
      100% cov
    • Alignment Length
      95 aa
    • CIGAR string
      2M2N3MNM2N2MN2MNM3N7MN11MN10MN2MN8MN2MN2MN9M2N3MNMN2MNM2N2M3H mismatches: 24 - insertions: 0 - deletions: 0
  • Hevea brasiliensis

    Hevea brasiliensis

    • Public DB hit
      GI:268321205
      ACZ02398
    • Hit length
      101 aa
    • E Value
      8.19E-33
    • BLAST Score
      144.1 bits
    • Similarity
      85.57%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 8
      98.98% cov
      ACZ02398
      96.04% cov
    • Alignment Length
      97 aa
  • Spinacia oleracea

    Spinacia oleracea

    • Public DB hit
      GI:226235246
      BAH47556
    • Hit length
      104 aa
    • E Value
      1E-32
    • BLAST Score
      144.1 bits
    • Similarity
      86.32%
    • Coverage
      96.94%
    • Alignment (schematic)

      SEQ ID NO 8
      96.94% cov
      BAH47556
      91.35% cov
    • Alignment Length
      95 aa
  • Dianthus caryophyllus

    Dianthus caryophyllus

    • Public DB hit
      GI:13603389
      AAK30004
    • Hit length
      98 aa
    • E Value
      1.29E-32
    • BLAST Score
      143.7 bits
    • Similarity
      87.76%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 8
      98.98% cov
      AAK30004
      100% cov
    • Alignment Length
      98 aa
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225435931
      XP_002268378
      1 of 2 hits reported for Vitis vinifera.
    • Hit length
      124 aa
    • E Value
      1.47E-32
    • BLAST Score
      143.3 bits
    • Similarity
      86.17%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 8
      95.92% cov
      XP_002268378
      75.81% cov
    • Alignment Length
      94 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255564458
      XP_002523225
    • Hit length
      101 aa
    • E Value
      1.81E-32
    • BLAST Score
      142.9 bits
    • Similarity
      83.51%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 8
      98.98% cov
      XP_002523225
      96.04% cov
    • Alignment Length
      97 aa
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224054226
      XP_002298154
      1 of 3 hits reported for Populus trichocarpa.
    • Hit length
      101 aa
    • E Value
      1.13E-31
    • BLAST Score
      140.6 bits
    • Similarity
      82.47%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 8
      98.98% cov
      XP_002298154
      96.04% cov
    • Alignment Length
      97 aa
  • Vigna unguiculata

    Vigna unguiculata

    • Public DB hit
      GI:1169196
      Q06445
    • Hit length
      97 aa
    • E Value
      4.84E-31
    • BLAST Score
      138.3 bits
    • Similarity
      85.57%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 8
      98.98% cov
      Q06445
      100% cov
    • Alignment Length
      97 aa
  • Jatropha curcas

    Jatropha curcas

    • Public DB hit
      GI:282848226
      ADB02894
    • Hit length
      106 aa
    • E Value
      1.28E-30
    • BLAST Score
      137.1 bits
    • Similarity
      83.51%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 8
      98.98% cov
      ADB02894
      91.51% cov
    • Alignment Length
      97 aa
  • Glycine max

    Glycine max

    • Public DB hit
      GI:255647357
      ACU24145
      1 of 2 hits reported for Glycine max.
    • Hit length
      245 aa
    • E Value
      1.52E-30
    • BLAST Score
      136.7 bits
    • Similarity
      82.47%
    • Coverage
      98.98%
    • Alignment (schematic)

      SEQ ID NO 8
      98.98% cov
      ACU24145
      39.59% cov
    • Alignment Length
      97 aa
  • Knorringia sibirica

    Knorringia sibirica

    • Public DB hit
      GI:290889339
      ADD69946
    • Hit length
      111 aa
    • E Value
      1.54E-30
    • BLAST Score
      136.7 bits
    • Similarity
      80.61%
    • Coverage
      97.96%
    • Alignment (schematic)

      SEQ ID NO 8
      97.96% cov
      ADD69946
      88.29% cov
    • Alignment Length
      98 aa
  • Populus tomentosa

    Populus tomentosa

    • Public DB hit
      GI:65306458
      AAY41807
    • Hit length
      143 aa
    • E Value
      2.1E-30
    • BLAST Score
      136.3 bits
    • Similarity
      81.91%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 8
      95.92% cov
      AAY41807
      65.73% cov
    • Alignment Length
      94 aa
  • Helianthus annuus

    Helianthus annuus

    • Public DB hit
      GI:7707812
      BAA95416
    • Hit length
      282 aa
    • E Value
      2.66E-30
    • BLAST Score
      136 bits
    • Similarity
      82.98%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 8
      95.92% cov
      BAA95416
      32.98% cov
    • Alignment Length
      94 aa
  • Populus balsamifera

    Populus balsamifera

    • Public DB hit
      GI:226231530
      ACO39758
    • Hit length
      127 aa
    • E Value
      2.86E-30
    • BLAST Score
      136 bits
    • Similarity
      81.91%
    • Coverage
      95.92%
    • Alignment (schematic)

      SEQ ID NO 8
      95.92% cov
      ACO39758
      74.02% cov
    • Alignment Length
      94 aa
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
336
Type
nucleotide
Locations
Undetermined

Declared organism:
Nicotiana alata (StPin1A)

Determined organism:
  • Solanum tuberosum

    Solanum tuberosum

    • Public DB hit
      GI:268374351
      FJ839694
      1 of 13 hits reported for Solanum tuberosum.
    • Hit length
      336 bp
    • E Value
      9.35E-175
    • BLAST Score
      621.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      FJ839694
      100% cov
    • Alignment Length
      336 bp
    • CIGAR string
      336M mismatches: 0 - insertions: 0 - deletions: 0
  • Solanum peruvianum

    Solanum peruvianum

    • Public DB hit
      GI:170476
      J05094
    • Hit length
      480 bp
    • E Value
      1.03E-109
    • BLAST Score
      405.5 bits
    • Similarity
      88.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      J05094
      70% cov
    • Alignment Length
      337 bp
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:170517
      K03290
      1 of 2 hits reported for Solanum lycopersicum.
    • Hit length
      511 bp
    • E Value
      4.77E-108
    • BLAST Score
      400 bits
    • Similarity
      88.27%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      K03290
      65.75% cov
    • Alignment Length
      341 bp
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
75
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Nicotiana alata (StPin1A)

Determined organism:
  • Solanum tuberosum

    Solanum tuberosum

    • Public DB hit
      GI:268374352
      ACZ04396
      1 of 14 hits reported for Solanum tuberosum.
    • Hit length
      111 aa
    • E Value
      3.02E-36
    • BLAST Score
      155.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      ACZ04396
      67.57% cov
    • Alignment Length
      75 aa
    • CIGAR string
      75M mismatches: 0 - insertions: 0 - deletions: 0
  • Solanum peruvianum

    Solanum peruvianum

    • Public DB hit
      GI:170516
      AAA34198
      1 of 2 hits reported for Solanum peruvianum.
    • Hit length
      111 aa
    • E Value
      4.76E-26
    • BLAST Score
      121.7 bits
    • Similarity
      85.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAA34198
      67.57% cov
    • Alignment Length
      75 aa
    • CIGAR string
      2MN2MNMN14M3N2MN9M3N2MN3MN2M2N4MN5MN12MN mismatches: 17 - insertions: 0 - deletions: 0
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:124119
      P05118
    • Hit length
      111 aa
    • E Value
      1.4E-23
    • BLAST Score
      113.6 bits
    • Similarity
      84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      P05118
      67.57% cov
    • Alignment Length
      75 aa
  • Nicotiana glauca x Nicotiana langsdorffii

    Nicotiana glauca x Nicotiana langsdorffii

    • Public DB hit
      GI:688425
      BAA05472
      1 of 2 hits reported for Nicotiana glauca x Nicotiana langsdorffii.
    • Hit length
      64 aa
    • E Value
      1.25E-17
    • BLAST Score
      94 bits
    • Similarity
      81.25%
    • Coverage
      85.33%
    • Alignment (schematic)

      SEQ ID NO 10
      85.33% cov
      BAA05472
      100% cov
    • Alignment Length
      64 aa
  • Nicotiana sylvestris

    Nicotiana sylvestris

    • Public DB hit
      GI:547743
      Q02214
    • Hit length
      94 aa
    • E Value
      3.2E-17
    • BLAST Score
      92.4 bits
    • Similarity
      75.34%
    • Coverage
      94.67%
    • Alignment (schematic)

      SEQ ID NO 10
      94.67% cov
      Q02214
      77.66% cov
    • Alignment Length
      73 aa
  • Solanum nigrum

    Solanum nigrum

    • Public DB hit
      GI:310694909
      ADP05503
      1 of 2 hits reported for Solanum nigrum.
    • Hit length
      64 aa
    • E Value
      4.73E-17
    • BLAST Score
      92 bits
    • Similarity
      79.69%
    • Coverage
      85.33%
    • Alignment (schematic)

      SEQ ID NO 10
      85.33% cov
      ADP05503
      100% cov
    • Alignment Length
      64 aa
Occurrence
7 times in PatSeqDB
Tools
PatSeq Finder

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