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Search for Biological Sequences disclosed in Patents

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Data obtained from: WIPO-PCT
43 sequences found in this patent (in total)

Displaying 1 - 10 of 43 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
5,895
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Occurrence
35 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
6,055
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:195546779
      NM_002253
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      6,055 bp
    • E Value
      0E0
    • BLAST Score
      11,182.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_002253
      100% cov
    • Alignment Length
      6,055 bp
    • CIGAR string
      6055M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819741
      XM_517284
    • Hit length
      6,058 bp
    • E Value
      0E0
    • BLAST Score
      10,996.1 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_517284
      100% cov
    • Alignment Length
      6,062 bp
    • CIGAR string
      90MN107MN1029MN47MN79MN80MN189MN72MN34MN1337MN956MN221MN146MN91MN26MN138MD58MN23MN168MN25MN46MN10MD3MD168MN84MD177M2I121MN170MI3MI2M3I114MN214M mismatches: 23 - insertions: 7 - deletions: 4
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673570
      XM_002814785
    • Hit length
      6,167 bp
    • E Value
      0E0
    • BLAST Score
      10,654.4 bits
    • Similarity
      98.45%
    • Coverage
      99.9%
    • Alignment (schematic)

      SEQ ID NO 2
      99.9% cov
      XM_002814785
      98.17% cov
    • Alignment Length
      6,058 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332238493
      XM_003268386
    • Hit length
      6,155 bp
    • E Value
      0E0
    • BLAST Score
      10,432.8 bits
    • Similarity
      97.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003268386
      98.16% cov
    • Alignment Length
      6,061 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297292904
      XM_001086814
    • Hit length
      5,871 bp
    • E Value
      0E0
    • BLAST Score
      9,688.6 bits
    • Similarity
      96.58%
    • Coverage
      96.23%
    • Alignment (schematic)

      SEQ ID NO 2
      96.23% cov
      XM_001086814
      100% cov
    • Alignment Length
      5,877 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296196522
      XM_002745820
    • Hit length
      6,089 bp
    • E Value
      0E0
    • BLAST Score
      9,577.8 bits
    • Similarity
      95.24%
    • Coverage
      99.92%
    • Alignment (schematic)

      SEQ ID NO 2
      99.92% cov
      XM_002745820
      99.46% cov
    • Alignment Length
      6,076 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335293462
      XM_003128987
    • Hit length
      5,578 bp
    • E Value
      0E0
    • BLAST Score
      6,503.2 bits
    • Similarity
      88.19%
    • Coverage
      90.5%
    • Alignment (schematic)

      SEQ ID NO 2
      90.5% cov
      XM_003128987
      98.57% cov
    • Alignment Length
      5,553 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:158508550
      NM_001110000
    • Hit length
      5,998 bp
    • E Value
      0E0
    • BLAST Score
      5,993.5 bits
    • Similarity
      88.05%
    • Coverage
      84.26%
    • Alignment (schematic)

      SEQ ID NO 2
      84.26% cov
      NM_001110000
      84.66% cov
    • Alignment Length
      5,145 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194209153
      XM_001916946
    • Hit length
      4,071 bp
    • E Value
      0E0
    • BLAST Score
      5,635.2 bits
    • Similarity
      91.67%
    • Coverage
      67.23%
    • Alignment (schematic)

      SEQ ID NO 2
      67.23% cov
      XM_001916946
      100% cov
    • Alignment Length
      4,084 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:114158631
      NM_001048024
    • Hit length
      4,068 bp
    • E Value
      0E0
    • BLAST Score
      5,576.2 bits
    • Similarity
      91.42%
    • Coverage
      67.23%
    • Alignment (schematic)

      SEQ ID NO 2
      67.23% cov
      NM_001048024
      100% cov
    • Alignment Length
      4,081 bp
Occurrence
152 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
5,718
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:68216043
      NM_002609
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      5,718 bp
    • E Value
      0E0
    • BLAST Score
      10,560.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_002609
      100% cov
    • Alignment Length
      5,718 bp
    • CIGAR string
      5718M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297676402
      XM_002816074
    • Hit length
      6,356 bp
    • E Value
      0E0
    • BLAST Score
      9,851.1 bits
    • Similarity
      97.78%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 3
      99.93% cov
      XM_002816074
      89.95% cov
    • Alignment Length
      5,720 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332234971
      XM_003266630
    • Hit length
      6,311 bp
    • E Value
      0E0
    • BLAST Score
      9,664.6 bits
    • Similarity
      97.26%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 3
      99.93% cov
      XM_003266630
      90.22% cov
    • Alignment Length
      5,725 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297295450
      XM_001107595
    • Hit length
      5,693 bp
    • E Value
      0E0
    • BLAST Score
      8,968.5 bits
    • Similarity
      95.09%
    • Coverage
      99.93%
    • Alignment (schematic)

      SEQ ID NO 3
      99.93% cov
      XM_001107595
      99.96% cov
    • Alignment Length
      5,743 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822400
      XM_518034
    • Hit length
      5,831 bp
    • E Value
      0E0
    • BLAST Score
      6,632.4 bits
    • Similarity
      99.32%
    • Coverage
      64.11%
    • Alignment (schematic)

      SEQ ID NO 3
      64.11% cov
      XM_518034
      62.89% cov
    • Alignment Length
      3,667 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:123982617
      DQ892124
      1 of 5 hits reported for synthetic construct.
    • Hit length
      3,361 bp
    • E Value
      0E0
    • BLAST Score
      6,137.5 bits
    • Similarity
      99.97%
    • Coverage
      58.17%
    • Alignment (schematic)

      SEQ ID NO 3
      58.17% cov
      DQ892124
      98.96% cov
    • Alignment Length
      3,326 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296193229
      XM_002744364
    • Hit length
      3,327 bp
    • E Value
      0E0
    • BLAST Score
      5,077.6 bits
    • Similarity
      94.17%
    • Coverage
      58.08%
    • Alignment (schematic)

      SEQ ID NO 3
      58.08% cov
      XM_002744364
      100% cov
    • Alignment Length
      3,330 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:282721145
      NM_001075896
      1 of 2 hits reported for Bos taurus.
    • Hit length
      4,452 bp
    • E Value
      0E0
    • BLAST Score
      4,518 bits
    • Similarity
      85.35%
    • Coverage
      78.07%
    • Alignment (schematic)

      SEQ ID NO 3
      78.07% cov
      NM_001075896
      99.12% cov
    • Alignment Length
      4,533 bp
Occurrence
111 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
5,190
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:148005048
      NM_000222
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      5,190 bp
    • E Value
      0E0
    • BLAST Score
      9,585.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_000222
      100% cov
    • Alignment Length
      5,190 bp
    • CIGAR string
      5190M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332819743
      XM_517285
    • Hit length
      5,151 bp
    • E Value
      0E0
    • BLAST Score
      9,280.5 bits
    • Similarity
      99.13%
    • Coverage
      99.61%
    • Alignment (schematic)

      SEQ ID NO 4
      99.61% cov
      XM_517285
      100% cov
    • Alignment Length
      5,171 bp
    • CIGAR string
      6H335MN20MN170MN39MN490MN225MN317MD2M5DM6D329MN11MN2MN11MN331MN324MN302MN219MN65MN65MI260MN476MN19MN103MN82MNMN114MN107M3D38MD2M4D181MN323MN162M14H mismatches: 24 - insertions: 1 - deletions: 20
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332238491
      XM_003268385
    • Hit length
      5,158 bp
    • E Value
      0E0
    • BLAST Score
      8,850.3 bits
    • Similarity
      97.6%
    • Coverage
      99.61%
    • Alignment (schematic)

      SEQ ID NO 4
      99.61% cov
      XM_003268385
      100% cov
    • Alignment Length
      5,175 bp
    • CIGAR string
      6H67MN6MN59MN70MN9MN47MN67MN62MN27MN89MN54MN44MN17MN10MN104MN86MN23MN44MN87MN103MN80MN44MN14MN14MN8MN19MN4MN124MN74MN26MN32MN57MD2M5DM6D35MN131MN89MN5MN41MN5MN32MN11MN56MN17MN188MN67MN54MN15MN4MN137MN95MN146MN8MN35MN20MN11MN41MN50MN85MN28M2IMI24MN7MN8MN68M2N23MN17MN25MN42MN13MN27MN59MN64MI170MN67MN187MN34MN3MN15MN54MN9MI15MN10MN3MN8MN10MN25MN17MN16MNMN22MN75MN45MN9MN30MN44MN2MN143M4DMD3MN39MN12MN6MN16MN47MN31MN192MN231MN43MN52MN6M14H mismatches: 102 - insertions: 5 - deletions: 17
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297292906
      XM_001089071
    • Hit length
      5,168 bp
    • E Value
      0E0
    • BLAST Score
      8,674.8 bits
    • Similarity
      96.97%
    • Coverage
      99.61%
    • Alignment (schematic)

      SEQ ID NO 4
      99.61% cov
      XM_001089071
      99.96% cov
    • Alignment Length
      5,178 bp
    • CIGAR string
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mismatches: 137 - insertions: 8 - deletions: 12
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297673572
      XM_002814796
    • Hit length
      6,093 bp
    • E Value
      0E0
    • BLAST Score
      7,768.1 bits
    • Similarity
      98.06%
    • Coverage
      86.13%
    • Alignment (schematic)

      SEQ ID NO 4
      86.13% cov
      XM_002814796
      73.26% cov
    • Alignment Length
      4,475 bp
    • CIGAR string
      706H394MN10MN15MN98MN63MN227MN361MN11MN44MN8MN17MN2MN11MN36MN19MN17MN30MN143MDM2D7MN29MN40MN36MN17MN62MN224MN113MN43M2N68MN5MN50MN68MN2MN13MN32MIMIMI36MN68MN32MN4MN4MN82MN27MN27MN31MN21MN160MN50M2N290MN3MN42MN63MN12MN36MN17MN16MN24MN15MN17MI42MIMN2M2D46MN3MN30MN44MN58MN107MD2M4D5MN89MD9MNMN23MN7MN69MN150MN201MN57MN47M14H mismatches: 71 - insertions: 5 - deletions: 11
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208965685
      AB463344
    • Hit length
      2,933 bp
    • E Value
      0E0
    • BLAST Score
      5,332.4 bits
    • Similarity
      99.56%
    • Coverage
      56.49%
    • Alignment (schematic)

      SEQ ID NO 4
      56.49% cov
      AB463344
      99.56% cov
    • Alignment Length
      2,932 bp
    • CIGAR string
      83H3MN1528M2DM8DM2D1386M2175H mismatches: 1 - insertions: 0 - deletions: 12
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:297207112
      NM_001185038
    • Hit length
      2,919 bp
    • E Value
      0E0
    • BLAST Score
      4,649.1 bits
    • Similarity
      95.36%
    • Coverage
      56.47%
    • Alignment (schematic)

      SEQ ID NO 4
      56.47% cov
      NM_001185038
      100% cov
    • Alignment Length
      2,933 bp
    • CIGAR string
      87H14MN32MN5MN40MN4MN12MN4MN6MN9MN9MN10MN11MN2MN4MN31MN8MN3MN18MN10MNMN10MN49MN29MN45MN75MN20MN16MN7MN8MN39MNMN5MD2MI5MN5M2N9MN2MN92MN5MN36MNMN7MN11MN36MN30MN15MN38MN99MN35MN10MN30MN44MN17MN20MN10MN27MN14MN4MNMN2MN12MN46MN92MN24MN2MN4MN13MN8MN14MN2MN32MN64M2DM8DM2D8MN39MN106MN95MN5MN41MN2M2N31MN2MN5MN5MN56MN17MN104MN8MN74MN2MN32MN2MN14MN13MN4MN31MN5MN143MN71MN6MN25MN5MN5MN11MN80MN2MN116MN5MN20MN26MN21MN15M2NMIMD5MN8MN23MN11MN2MN25M2N2MN2MN6M2172H mismatches: 120 - insertions: 2 - deletions: 14
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:262050643
      NM_001166484
    • Hit length
      5,144 bp
    • E Value
      0E0
    • BLAST Score
      4,150.5 bits
    • Similarity
      83.85%
    • Coverage
      86.34%
    • Alignment (schematic)

      SEQ ID NO 4
      86.34% cov
      NM_001166484
      86.33% cov
    • Alignment Length
      4,570 bp
Occurrence
115 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
3,291
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:189458830
      NM_002880
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      3,291 bp
    • E Value
      0E0
    • BLAST Score
      6,078.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_002880
      100% cov
    • Alignment Length
      3,291 bp
    • CIGAR string
      3291M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332816106
      XM_516289
    • Hit length
      3,272 bp
    • E Value
      0E0
    • BLAST Score
      5,962.1 bits
    • Similarity
      99.54%
    • Coverage
      99.51%
    • Alignment (schematic)

      SEQ ID NO 5
      99.51% cov
      XM_516289
      100% cov
    • Alignment Length
      3,275 bp
    • CIGAR string
      11MN49MN282MN432MN212MN197MN113MN252MN861M3D153M2N213MN401MN84M16H mismatches: 12 - insertions: 0 - deletions: 3
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332231719
      XM_003264994
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,286 bp
    • E Value
      0E0
    • BLAST Score
      5,786.7 bits
    • Similarity
      98.54%
    • Coverage
      99.51%
    • Alignment (schematic)

      SEQ ID NO 5
      99.51% cov
      XM_003264994
      99.82% cov
    • Alignment Length
      3,281 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197102539
      NM_001133258
    • Hit length
      3,235 bp
    • E Value
      0E0
    • BLAST Score
      5,655.6 bits
    • Similarity
      98.42%
    • Coverage
      97.9%
    • Alignment (schematic)

      SEQ ID NO 5
      97.9% cov
      NM_001133258
      99.17% cov
    • Alignment Length
      3,222 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297285227
      XM_001086154
    • Hit length
      3,035 bp
    • E Value
      0E0
    • BLAST Score
      4,990.8 bits
    • Similarity
      97.92%
    • Coverage
      87.78%
    • Alignment (schematic)

      SEQ ID NO 5
      87.78% cov
      XM_001086154
      94.76% cov
    • Alignment Length
      2,891 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194221069
      XM_001492240
    • Hit length
      3,576 bp
    • E Value
      0E0
    • BLAST Score
      3,410 bits
    • Similarity
      89.62%
    • Coverage
      81.68%
    • Alignment (schematic)

      SEQ ID NO 5
      81.68% cov
      XM_001492240
      75.73% cov
    • Alignment Length
      2,736 bp
Occurrence
102 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
5,616
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:41327737
      NM_005228
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      5,616 bp
    • E Value
      0E0
    • BLAST Score
      10,371.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_005228
      100% cov
    • Alignment Length
      5,616 bp
    • CIGAR string
      5616M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332865275
      XM_519102
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      10,003 bp
    • E Value
      0E0
    • BLAST Score
      10,069.1 bits
    • Similarity
      99.11%
    • Coverage
      99.72%
    • Alignment (schematic)

      SEQ ID NO 6
      99.72% cov
      XM_519102
      56.02% cov
    • Alignment Length
      5,606 bp
    • CIGAR string
      37MN17MN106MN376MN56MN128MN50MN179MN11MN26MN291MN112MN101MN59MN2MN143MN156MN10MN203MN95MN230MN89MN338MN14MN365MN8MN155M2N212MN247MN184MN14MN9MIM5I104M2D529MN51M2N246MN53MN426MN19MN6MN37MN42MN19M16H mismatches: 42 - insertions: 6 - deletions: 2
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332251848
      XM_003275013
    • Hit length
      7,517 bp
    • E Value
      0E0
    • BLAST Score
      8,876.1 bits
    • Similarity
      97.12%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 6
      93.77% cov
      XM_003275013
      69.96% cov
    • Alignment Length
      5,276 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:61354744
      AY888106
      1 of 4 hits reported for synthetic construct.
    • Hit length
      3,633 bp
    • E Value
      0E0
    • BLAST Score
      6,706.3 bits
    • Similarity
      100%
    • Coverage
      64.65%
    • Alignment (schematic)

      SEQ ID NO 6
      64.65% cov
      AY888106
      99.94% cov
    • Alignment Length
      3,631 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297288278
      XM_001107305
    • Hit length
      3,618 bp
    • E Value
      0E0
    • BLAST Score
      6,019.4 bits
    • Similarity
      97.55%
    • Coverage
      62.62%
    • Alignment (schematic)

      SEQ ID NO 6
      62.62% cov
      XM_001107305
      97.21% cov
    • Alignment Length
      3,517 bp
Occurrence
568 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
8,733
Type
DNA
Locations
Fulltext

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:206725550
      NM_004958
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      8,733 bp
    • E Value
      0E0
    • BLAST Score
      16,127.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_004958
      100% cov
    • Alignment Length
      8,733 bp
    • CIGAR string
      8733M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297666468
      XM_002811502
    • Hit length
      8,843 bp
    • E Value
      0E0
    • BLAST Score
      14,628.4 bits
    • Similarity
      96.85%
    • Coverage
      99.76%
    • Alignment (schematic)

      SEQ ID NO 7
      99.76% cov
      XM_002811502
      99.49% cov
    • Alignment Length
      8,826 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332807628
      XR_022807
    • Hit length
      8,657 bp
    • E Value
      0E0
    • BLAST Score
      14,207.4 bits
    • Similarity
      99.69%
    • Coverage
      88.93%
    • Alignment (schematic)

      SEQ ID NO 7
      88.93% cov
      XR_022807
      89.7% cov
    • Alignment Length
      7,766 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168275657
      AB384693
    • Hit length
      7,664 bp
    • E Value
      0E0
    • BLAST Score
      14,100.3 bits
    • Similarity
      99.95%
    • Coverage
      87.56%
    • Alignment (schematic)

      SEQ ID NO 7
      87.56% cov
      AB384693
      99.78% cov
    • Alignment Length
      7,647 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296206703
      XM_002750283
    • Hit length
      8,361 bp
    • E Value
      0E0
    • BLAST Score
      13,995 bits
    • Similarity
      96.84%
    • Coverage
      95.61%
    • Alignment (schematic)

      SEQ ID NO 7
      95.61% cov
      XM_002750283
      99.94% cov
    • Alignment Length
      8,362 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149695399
      XM_001492351
    • Hit length
      8,705 bp
    • E Value
      0E0
    • BLAST Score
      12,739.3 bits
    • Similarity
      93.14%
    • Coverage
      99.52%
    • Alignment (schematic)

      SEQ ID NO 7
      99.52% cov
      XM_001492351
      99.94% cov
    • Alignment Length
      8,727 bp
  • Capra hircus

    Capra hircus

    • Public DB hit
      GI:297613710
      HM114224
    • Hit length
      8,617 bp
    • E Value
      0E0
    • BLAST Score
      11,631.3 bits
    • Similarity
      91.06%
    • Coverage
      98.79%
    • Alignment (schematic)

      SEQ ID NO 7
      98.79% cov
      HM114224
      99.95% cov
    • Alignment Length
      8,654 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297484093
      XM_002694043
    • Hit length
      8,303 bp
    • E Value
      0E0
    • BLAST Score
      11,394.9 bits
    • Similarity
      91.48%
    • Coverage
      95.11%
    • Alignment (schematic)

      SEQ ID NO 7
      95.11% cov
      XM_002694043
      99.9% cov
    • Alignment Length
      8,334 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73950925
      XM_535407
    • Hit length
      8,664 bp
    • E Value
      0E0
    • BLAST Score
      11,389.4 bits
    • Similarity
      91.82%
    • Coverage
      93.64%
    • Alignment (schematic)

      SEQ ID NO 7
      93.64% cov
      XM_535407
      94.37% cov
    • Alignment Length
      8,190 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335290495
      XM_003127584
    • Hit length
      8,590 bp
    • E Value
      0E0
    • BLAST Score
      11,129 bits
    • Similarity
      90.1%
    • Coverage
      98.43%
    • Alignment (schematic)

      SEQ ID NO 7
      98.43% cov
      XM_003127584
      99.97% cov
    • Alignment Length
      8,636 bp
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:224451144
      NM_001145455
    • Hit length
      7,722 bp
    • E Value
      0E0
    • BLAST Score
      11,021.9 bits
    • Similarity
      92.44%
    • Coverage
      88.39%
    • Alignment (schematic)

      SEQ ID NO 7
      88.39% cov
      NM_001145455
      100% cov
    • Alignment Length
      7,727 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301774750
      XM_002922761
    • Hit length
      7,635 bp
    • E Value
      0E0
    • BLAST Score
      10,798.5 bits
    • Similarity
      92.2%
    • Coverage
      87.45%
    • Alignment (schematic)

      SEQ ID NO 7
      87.45% cov
      XM_002922761
      99.99% cov
    • Alignment Length
      7,641 bp
Occurrence
123 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
19
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:259013218
      NG_012920
      1 of 19 hits reported for Homo sapiens.
    • Hit length
      13,673 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NG_012920
      0.14% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843754
      XR_128792
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      795 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_128792
      2.39% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197101686
      NM_001134031
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      958 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001134031
      1.98% cov
    • Alignment Length
      19 bp
Occurrence
45 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
24
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:259013218
      NG_012920
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      13,673 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NG_012920
      0.18% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843754
      XR_128792
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      795 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XR_128792
      3.02% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332235422
      XM_003266855
      1 of 17 hits reported for Nomascus leucogenys.
    • Hit length
      767 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003266855
      3.13% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:325296940
      NM_001173535
    • Hit length
      732 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001173535
      3.28% cov
    • Alignment Length
      24 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:114051849
      NM_001047137
    • Hit length
      898 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001047137
      2.67% cov
    • Alignment Length
      24 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197101686
      NM_001134031
    • Hit length
      958 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001134031
      2.51% cov
    • Alignment Length
      24 bp
Occurrence
64 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
22
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:259013218
      NG_012920
      1 of 17 hits reported for Homo sapiens.
    • Hit length
      13,673 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NG_012920
      0.16% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332843754
      XR_128792
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      795 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XR_128792
      2.77% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197101686
      NM_001134031
    • Hit length
      958 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001134031
      2.3% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208965875
      AB463439
      1 of 3 hits reported for synthetic construct.
    • Hit length
      374 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AB463439
      5.88% cov
    • Alignment Length
      22 bp
Occurrence
73 times in PatSeqDB
Tools
PatSeq Finder

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